Citrus Sinensis ID: 039623

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
Protein Sequence
MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE
Secondary Structure (PSIPRED)
ccEEEEEccccccHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHcccEEEEEccccHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccEEEEccccccEEcccHHHHHHHHHHHcccccccccEEEEccccccccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccHHHHHHHHHHEEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccEEEEEcccHHHHHHHHHHHHHHHHccccEcccccccccHHHccccccccHHHHHHHHHHHHHHHHccccEEEEEcHHHHHcccccccccccccccccEEEEEEcccEEEEEEcHccHEEEEEEEccccccccEEEEEccccccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHcccccccEEEEEEEEEEEEccEEEEEEccccccEEHEcccc
Coil and Loop (DISEMBL)
maatliiggtgyIGKKILEASVKAGHPTFALVRestasdpvkGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAgnvkrflpsefgndvdrsqnvvepaksayaDKIKIRRAIEAEGIQYTYVScncfagyflptlaqigapapprekvtifgdgnagavynkeddiatytinsidgprtlnktlyirppgnvysfNELVTLWENKIGKTLEKTYVAEEKLLKdiqdapipLNVLLAITYATfvkgdqanfeintasgveaselype
Flexible Loop (DISEMBL)
maatliiggtgyiGKKILEASVKAGHPTFALvrestasdpvKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFlpsefgndvdrsqnvvepaksayadkikIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYtinsidgprtlNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINtasgveaselype
Low Complexity Region (SEG)
MAAtliiggtgyigkkilEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE
Disordered region (IsUnstruct)
***TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFG************AKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEIN*************
Disordered Region (DISOPRED)
MAATLIIGGTGYIGKKILEASVKAGHPTFALV***************IFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE
Disordered Region (DISEMBL)
MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGV********
Disordered Region (DISPRO)
*AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	292	2.2.26 [Sep-21-2011]
E1U332	308	Isoflavone reductase-like	N/A	no	0.982	0.931	0.687	1e-111
P52577	310	Isoflavone reductase homo	yes	no	0.979	0.922	0.682	1e-111
P52579	310	Isoflavone reductase homo	N/A	no	0.982	0.925	0.631	1e-106
P52578	308	Isoflavone reductase homo	N/A	no	0.982	0.931	0.642	1e-105
P52580	309	Isoflavone reductase homo	N/A	no	0.982	0.928	0.545	1e-90
P52575	318	Isoflavone reductase OS=M	N/A	no	0.979	0.899	0.528	2e-83
Q00016	318	Isoflavone reductase OS=C	N/A	no	0.979	0.899	0.518	2e-81
P52576	318	Isoflavone reductase OS=P	N/A	no	0.979	0.899	0.515	3e-81
P52581	312	Isoflavone reductase homo	N/A	no	0.993	0.929	0.449	4e-70
Q15GI3	323	Isoeugenol synthase 1 OS=	N/A	no	0.965	0.873	0.453	4e-66

>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1

 Score =  402 bits (1034), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/288 (68%), Positives = 235/288 (81%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK I+EAS K+ HPTFAL REST SDPVKGK+I+ FKN GV +L GDL DH
Sbjct: 8   LIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQGFKNSGVTILTGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KAIKQVDVVISTV + Q+ +Q KIIAA+KEAGNVKRF PS+FG DVDR  + VEPA
Sbjct: 68  ESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKEAGNVKRFFPSDFGTDVDRC-HAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           KS++  K +IRRAIEAEGI YT+VS N FAGY LPTL Q    APPR+KV I GDGNA A
Sbjct: 127 KSSFEIKSQIRRAIEAEGIPYTFVSANYFAGYSLPTLVQPEVTAPPRDKVIILGDGNAKA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           V+N+E+DI TYTI ++D  RTLNK LYI+PP N+YSFNELV LWE KIGKTLEK YV EE
Sbjct: 187 VFNEENDIGTYTIKAVDDARTLNKILYIKPPKNIYSFNELVALWEKKIGKTLEKIYVPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           ++LK IQ++P P+N+++AI ++ FVKGD  NF+I  + GVEASELYP+
Sbjct: 247 QVLKQIQESPFPINIVMAINHSAFVKGDLTNFKIEPSFGVEASELYPD 294

Olea europaea (taxid: 4146)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score =  400 bits (1029), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/290 (68%), Positives = 235/290 (81%), Gaps = 4/290 (1%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+IGGTGYIGK ++EAS KAGH TFALVRE+T SDPVKGK ++ FK+LGV +L+GDL DH
Sbjct: 9   LVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDH 68

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KAIKQVDVVISTV   QI +Q KII+A+KEAGNVKRFLPSEFG DVDR+ + VEPA
Sbjct: 69  ESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPA 127

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQI--GAPAPPREKVTIFGDGNA 182
           KSA+A KI+IRR IEAEGI YTY    CF GY+LPTL Q   G  +PPR+KVTI GDGNA
Sbjct: 128 KSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNA 187

Query: 183 GAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA 242
            AV NKE+DIA YTI ++D PRTLNK LYI+P  N  S NE+VTLWE KIGK+LEKT++ 
Sbjct: 188 KAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHLP 247

Query: 243 EEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           EE+LLK IQ++PIP+NV+L+I +A FV GD  N  I  + GVEASELYP+
Sbjct: 248 EEQLLKSIQESPIPINVVLSINHAVFVNGD-TNISIEPSFGVEASELYPD 296

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1

 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 182/288 (63%), Positives = 229/288 (79%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK ++E S K+GHPTFAL+REST  +P K KLI+ FK+ GV +L+GD+ + 
Sbjct: 10  LIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISNQ 69

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KAIKQVDVVISTV   Q  +Q  II A+KEAGN+KRFLPSEFG DVD ++  +EPA
Sbjct: 70  ESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPA 128

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
            S +A K++IRR IEAEGI YTYV CN FA +FLP L Q+ A  PPR+KV IFGDGN  A
Sbjct: 129 ASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKA 188

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           +Y KE+DIATYTI ++D PRTLNKTL++RPP N+ SFNE+V+LWE+KIGKTLEK Y++EE
Sbjct: 189 IYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKLYLSEE 248

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
            +L+ +Q+ P+PL   LAI ++ FV GD ANFE+   +GVEA+ELYP+
Sbjct: 249 DILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPK 296

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1

 Score =  380 bits (977), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/288 (64%), Positives = 224/288 (77%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L IGGTGYIGK I+EAS KAGH TF LVREST S+P K KLI+ FK+ GV  ++GDL DH
Sbjct: 8   LFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KAIKQVDVVISTV    + +Q K+IAA+KEAGNVKRF PSEFGNDVDR    VEPA
Sbjct: 68  ESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           K+A+  K +IRR +EAEGI +TYV+   FAGY LP LAQ GA  PP +KV I G GN  A
Sbjct: 127 KAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           V+NKE+DI TYTIN++D P+TLNK LYI+PP N+ + NELV+LWE K GK LE+ YV EE
Sbjct: 187 VFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNLERLYVPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           ++LK+IQ+A +P+NV L+I +  FVKGD  NFEI  + GVEASE+YP+
Sbjct: 247 QVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPD 294

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score =  333 bits (853), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 157/288 (54%), Positives = 208/288 (72%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L++GGTGY+G+ ++ AS + GHPT ALVR++  SDP K  L++ F++ GV +L GDL D 
Sbjct: 9   LVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQ 68

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
            SL+ A+K  DVVIS +   QI +Q++++ A+KEAGNVKRF PSEFG DVDR+  +VEPA
Sbjct: 69  ASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPA 127

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           KS    K+ IRRA EA GI YTY     FAG+ LP + Q+ AP PP +K  + GDG+  A
Sbjct: 128 KSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKA 187

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           V+ +E DIATYT+ + D PR  NK LYI+PP N  S NEL++LWE K GKT  + YV EE
Sbjct: 188 VFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEE 247

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
            +LK IQ++PIPLN++LAI +A FV+G+Q  FEI+ A GV+ASELYP+
Sbjct: 248 AVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPD 295

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1

 Score =  309 bits (791), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/299 (52%), Positives = 212/299 (70%), Gaps = 13/299 (4%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRES----------TASDP-VKGKLIEIFKNLG 53
           LI+G TG IG+ I+ AS+KAG+PT+ALVR++          TA++P  K +LI+ +++LG
Sbjct: 8   LILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLG 67

Query: 54  VNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGND 113
           V +L GD+ DHE+L+KAIKQVD+VI    R  I +Q KII A+KEAGNVK+F PSEFG D
Sbjct: 68  VILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLD 127

Query: 114 VDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK 173
           VDR +  VEP +  + +K  IRR IEAEG+ YTY+ C+ F GYFL  LAQ+    PPR+K
Sbjct: 128 VDRHE-AVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDK 186

Query: 174 VTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG 233
           V I GDGN    Y  E D+ T+TI + + P TLNK ++IR P N  + NE++ LWE KIG
Sbjct: 187 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVIALWEKKIG 246

Query: 234 KTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           KTLEKTYV+EE++LKDIQ++  P N LLA+ ++  +KGD A +EI+ A  +EASE YP+
Sbjct: 247 KTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGD-AVYEIDPAKDIEASEAYPD 304

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa.

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1

 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/299 (51%), Positives = 208/299 (69%), Gaps = 13/299 (4%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRES----------TASDP-VKGKLIEIFKNLG 53
           L++G TG IG+ ++ AS+KAG+PT+AL+R++           A++P  K +L++ FK  G
Sbjct: 8   LVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAG 67

Query: 54  VNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGND 113
           V +L GD+ DHE+L+KAIKQVD VI T  R  I +Q KII A+KEAGNVKRF PSEFG D
Sbjct: 68  VILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLD 127

Query: 114 VDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK 173
           VDR  + V+P +  + +K  IRR +EAEG+ YTY+ C+ F GYFL  LAQ  A  PPR+K
Sbjct: 128 VDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDK 186

Query: 174 VTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG 233
           V I GDGN    Y  E D+ TYTI + + PRTLNK ++IR P N  + NE+V+LWE KIG
Sbjct: 187 VIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVVSLWEKKIG 246

Query: 234 KTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           KTLEK+Y++EEK+LKDI  +  P N LLA+ ++  +KGD A +EI+ A   EA +LYP+
Sbjct: 247 KTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKGD-AVYEIDPAKDAEAYDLYPD 304

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins.

Cicer arietinum (taxid: 3827)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1

 Score =  301 bits (771), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 154/299 (51%), Positives = 207/299 (69%), Gaps = 13/299 (4%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVREST----------ASDP-VKGKLIEIFKNLG 53
           LI+G TG IG+ I+ AS+KAG+PT+ALVR+++          A++P  K +L++ ++  G
Sbjct: 8   LILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASG 67

Query: 54  VNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGND 113
           V +L GD+ DHE+L+ AIKQVD VI    R  I +Q K+I A+KEAGNVKRF PSEFG D
Sbjct: 68  VILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLD 127

Query: 114 VDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK 173
           VDR  + VEP +  + +K  IRR +E+EG+ YTY+ C+ F GYFL  LAQI A  PPR+K
Sbjct: 128 VDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDK 186

Query: 174 VTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG 233
           V I GDGN    Y  E D+ TYTI + + P TLNK ++IR P N  + NE++ LWE KIG
Sbjct: 187 VVILGDGNVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEVIALWEKKIG 246

Query: 234 KTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           KTLEKTYV+EE++LKDIQ +  P N LLA+ ++  +KGD A +EI+ A  VEA + YP+
Sbjct: 247 KTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKGD-AVYEIDPAKDVEAYDAYPD 304

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1

 Score =  265 bits (676), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 188/296 (63%), Gaps = 6/296 (2%)

Query: 2   AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL 61
           +  L++GGTGY+G++I++AS++ GH TF L R     D  K +++  FK  G  ++    
Sbjct: 4   SKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASF 63

Query: 62  QDHESLIKAIKQVDVVISTVS-----RGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDR 116
            DH+SL+ A+K VDVVI T+S        +  Q K++ A+K+AGN+KRFLPSEFG D   
Sbjct: 64  SDHKSLVDAVKLVDVVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFLPSEFGMDPAL 123

Query: 117 SQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI 176
             + +EP +  + +K+ +R+AIE   I +TY+S NCFAGYF   L+Q+    PPR+KV +
Sbjct: 124 MGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLL 183

Query: 177 FGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL 236
           +GDGN   VY  EDD+ATYTI +ID PRTLNKT+Y+RPP N+ +  EL+  WE  IGK L
Sbjct: 184 YGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIGKQL 243

Query: 237 EKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           EK  ++E+  L  ++       V +   Y  F +G   NFEI   +G EASELYPE
Sbjct: 244 EKNSISEKDFLSTLKGLDFASQVGVGHFYHIFYEGCLTNFEIG-ENGEEASELYPE 298

Lupinus albus (taxid: 3870)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1

 Score =  251 bits (641), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 131/289 (45%), Positives = 189/289 (65%), Gaps = 7/289 (2%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRE-STASDPVKGKLIEIFKNLGVNVLYGDLQD 63
           LI+G TGY+GK +++AS+  GHPT+A V      SD  K +L++ F++LGV + YG+L +
Sbjct: 9   LILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSE 68

Query: 64  HESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEP 123
           H+ L+   K+VD+VIST++  Q  EQ K+I A+KEAGN+KRF+PSEFGN+VDR + +  P
Sbjct: 69  HDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVRAL--P 126

Query: 124 AKSAYAD-KIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNA 182
              A  D K KIRRA EA GI +T+VS N    YF+  L     P    E+VTI+G G+A
Sbjct: 127 RFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLH---PRQKSEQVTIYGSGDA 183

Query: 183 GAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA 242
            AV N E+D+A YTI + D PR  N+ L I+PP N+ S  +LV+ WE   G TL+ T+++
Sbjct: 184 KAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKMTHIS 243

Query: 243 EEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYP 291
           E++++K  +    P N+  +I +  F+ G Q +FE+     +EASELYP
Sbjct: 244 EQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYP 292

Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
4731376	300	isoflavone reductase homolog Bet v 6.010	0.982	0.956	0.736	1e-120
10764491	308	allergenic isoflavone reductase-like pro	0.982	0.931	0.736	1e-120
383081915	308	phenylcoumaran benzylic ether reductase	0.993	0.941	0.711	1e-119
213385143	308	phenylcoumaran benzylic ether reductase	0.993	0.941	0.704	1e-118
225458243	308	PREDICTED: isoflavone reductase homolog	0.982	0.931	0.715	1e-118
383081913	308	phenylcoumaran benzylic ether reductase	0.982	0.931	0.718	1e-117
149349524	309	eugenol synthase 2 [Clarkia breweri]	0.982	0.928	0.730	1e-117
383081911	308	phenylcoumaran benzylic ether reductase	0.982	0.931	0.715	1e-117
76559892	308	TPA: isoflavone reductase-like protein 4	0.982	0.931	0.708	1e-116
149349541	308	eugenol synthase 1 [Petunia x hybrida]	0.982	0.931	0.711	1e-116

>gi|4731376|gb|AAC05116.2| isoflavone reductase homolog Bet v 6.0101 [Betula pendula]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/288 (73%), Positives = 242/288 (84%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK I+EAS K+GHPTFALVREST SDPVKGKL+E FK LGV +L+GDL DH
Sbjct: 8   LIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVEKFKGLGVTLLHGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KA KQVDVVISTV   Q+ +Q KIIAA+KEAGN+KRF PSEFGNDVDR  + VEPA
Sbjct: 68  ESLVKAFKQVDVVISTVGHLQLADQVKIIAAIKEAGNIKRFFPSEFGNDVDRV-HAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           K+A+A K +IRR  EAEGI YTYVS N FAGYFLPTLAQ G  +PPREKV IFGDGNA A
Sbjct: 127 KTAFATKAEIRRKTEAEGIPYTYVSSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           V+NKEDDI TYTI ++D PRTLNK +YI+P  N+YSFNE+V LWE KIGKTLEK YV EE
Sbjct: 187 VFNKEDDIGTYTIRAVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           KLLKDIQ++PIP+NV+LAI ++ FVKGD  NFEI  + GVEASELYP+
Sbjct: 247 KLLKDIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPD 294

Source: Betula pendula

Species: Betula pendula

Genus: Betula

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10764491|gb|AAG22740.1|AF282850_1 allergenic isoflavone reductase-like protein Bet v 6.0102 [Betula pendula]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/288 (73%), Positives = 242/288 (84%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK I+EAS K+GHPTFALVREST SDPVKGKL+E FK LGV +L+GDL DH
Sbjct: 8   LIIGGTGYIGKFIVEASAKSGHPTFALVRESTVSDPVKGKLVEKFKGLGVTLLHGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KA KQVDVVISTV   Q+ +Q KIIAA+KEAGN+KRF PSEFGNDVDR  + VEPA
Sbjct: 68  ESLVKAFKQVDVVISTVGHLQLADQVKIIAAIKEAGNIKRFFPSEFGNDVDRV-HAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           K+A+A K +IRR  EAEGI YTYVS N FAGYFLPTLAQ G  +PPREKV IFGDGNA A
Sbjct: 127 KTAFATKAEIRRKTEAEGIPYTYVSSNFFAGYFLPTLAQPGLTSPPREKVVIFGDGNARA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           V+NKEDDI TYTI ++D PRTLNK +YI+P  N+YSFNE+V LWE KIGKTLEK YV EE
Sbjct: 187 VFNKEDDIGTYTIRAVDDPRTLNKIVYIKPAKNIYSFNEIVALWEKKIGKTLEKIYVPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           KLLKDIQ++PIP+NV+LAI ++ FVKGD  NFEI  + GVEASELYP+
Sbjct: 247 KLLKDIQESPIPINVILAINHSVFVKGDHTNFEIEASFGVEASELYPD 294

Source: Betula pendula

Species: Betula pendula

Genus: Betula

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|383081915|dbj|BAM05610.1| phenylcoumaran benzylic ether reductase [Eucalyptus globulus subsp. globulus]

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/291 (71%), Positives = 243/291 (83%), Gaps = 1/291 (0%)

Query: 2   AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL 61
           +  LIIGGTGYIGK I+EAS KAGHPTFALVR+ST SDPVKG+L+E FKNLGV +L GDL
Sbjct: 5   SKVLIIGGTGYIGKFIVEASAKAGHPTFALVRQSTVSDPVKGQLVESFKNLGVTLLIGDL 64

Query: 62  QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVV 121
            DHESL+KAIKQ DVVISTV   Q+ +Q KI+ A+KEAGNVKRF PSEFGNDVDR  + V
Sbjct: 65  YDHESLVKAIKQADVVISTVGHMQMADQTKIVDAIKEAGNVKRFFPSEFGNDVDRV-HAV 123

Query: 122 EPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGN 181
           EPAKSA+  K +IRRA+EA GI YTYV C CFAGYFLPTLAQ G  APP++KVT+ GDGN
Sbjct: 124 EPAKSAFELKAQIRRAVEAAGIPYTYVPCGCFAGYFLPTLAQPGVTAPPKDKVTVMGDGN 183

Query: 182 AGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYV 241
           A A++NKEDDIA +TI ++D PR+LNK LYIRPP NVYSFNELV LWE KIGKTLEK Y+
Sbjct: 184 AKAIFNKEDDIAAFTIKAVDDPRSLNKILYIRPPKNVYSFNELVALWEKKIGKTLEKIYL 243

Query: 242 AEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
            EE++LK IQ++PIP+NV+LA+ ++ FVKGD ANFEI  + GVEASELYP+
Sbjct: 244 PEEQILKQIQESPIPINVILAVNHSIFVKGDGANFEIEESFGVEASELYPD 294

Source: Eucalyptus globulus subsp. globulus

Species: Eucalyptus globulus

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|213385143|dbj|BAG84267.1| phenylcoumaran benzylic ether reductase [Nicotiana tabacum]

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/291 (70%), Positives = 244/291 (83%), Gaps = 1/291 (0%)

Query: 2   AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL 61
           +  LIIGGTGYIGK ++EAS K+GHPTFALVREST SDPVK K++E FKNLGV +L+GDL
Sbjct: 5   SKVLIIGGTGYIGKFVVEASAKSGHPTFALVRESTLSDPVKSKIVENFKNLGVTILHGDL 64

Query: 62  QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVV 121
            DHESL+KAIKQVDVVIST+   Q+ +Q K+IAA+KEAGN+KRF PSEFG DVD++ N V
Sbjct: 65  YDHESLVKAIKQVDVVISTMGMMQLGDQVKLIAAIKEAGNIKRFFPSEFGMDVDKT-NAV 123

Query: 122 EPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGN 181
           EPAKSA+A K++IRRAIEAEGI YTYVSCNCFAGYFLPT+ Q GA  PPR+KV I GDGN
Sbjct: 124 EPAKSAFAVKVQIRRAIEAEGIPYTYVSCNCFAGYFLPTMVQPGATVPPRDKVIIPGDGN 183

Query: 182 AGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYV 241
             AV+N+E DI TYTI ++D PRTLNKTLYI+PP N  SFNELV +WE  IGKTLEK Y+
Sbjct: 184 VKAVFNEEHDIGTYTIKAVDDPRTLNKTLYIKPPKNTLSFNELVAMWEKMIGKTLEKIYI 243

Query: 242 AEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
            EE++LKDI+ +P+PL V+LAI +ATFVKGDQ NF+I  + GVEASELYP+
Sbjct: 244 PEEQILKDIETSPMPLPVILAINHATFVKGDQTNFKIEPSFGVEASELYPD 294

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458243|ref|XP_002282110.1| PREDICTED: isoflavone reductase homolog P3 [Vitis vinifera] gi|302142513|emb|CBI19716.3| unnamed protein product [Vitis vinifera]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 243/288 (84%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK +++AS K+GHPTFALVREST +DPVKGKLI+ FKN GV +L+GDL DH
Sbjct: 8   LIIGGTGYIGKFVVQASAKSGHPTFALVRESTIADPVKGKLIQEFKNSGVTLLHGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           +SL+KAIKQVDVVISTV   Q+ +Q KIIAA+KEAGNVKRFLPSEFGNDVDR  N VEPA
Sbjct: 68  DSLVKAIKQVDVVISTVGFMQLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRV-NAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           KSA+A K+++RRAIEAEGI YT+V  NCFAGYFLPTL Q G  APPR+KV I GDGN  A
Sbjct: 127 KSAFAAKVQMRRAIEAEGIPYTFVVANCFAGYFLPTLVQPGVSAPPRDKVIILGDGNPKA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
            +N+EDDI TYTI ++D PRTLNK LYI+PP +  SFNELV+LWE+KIGKTLEK YV EE
Sbjct: 187 CFNREDDIGTYTIKAVDDPRTLNKILYIKPPNSTLSFNELVSLWESKIGKTLEKVYVPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           ++LKDIQ+AP+P+NV L+I ++ FV GDQ NFEI  + GVEASELYP+
Sbjct: 247 QVLKDIQEAPMPINVFLSIQHSVFVNGDQTNFEIEPSFGVEASELYPD 294

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|383081913|dbj|BAM05609.1| phenylcoumaran benzylic ether reductase [Eucalyptus pyrocarpa]

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/288 (71%), Positives = 240/288 (83%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK I+EAS KAGHPTFALVR+ST SDPVKGKL+E FK+LGV +L GDL DH
Sbjct: 8   LIIGGTGYIGKFIVEASAKAGHPTFALVRQSTVSDPVKGKLVESFKSLGVTLLIGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KAIKQ DVVISTV   Q+ +Q KI+ A+KEAGNVKRF PSEFGNDVDR  + VEPA
Sbjct: 68  ESLVKAIKQADVVISTVGHMQMADQTKIVDAIKEAGNVKRFFPSEFGNDVDRV-HAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           KSA+  K +IRRA EA GI +TYV C CFA YFLPTLAQ G  APP++KVTI GDGNA A
Sbjct: 127 KSAFELKAQIRRAAEAAGIPHTYVPCGCFAAYFLPTLAQPGVTAPPKDKVTIMGDGNAKA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           ++NKEDDIA +TI ++D PRTLNK LYIRPP NVYSFNELV LWE KIGKTLEK Y+ EE
Sbjct: 187 IFNKEDDIAAFTIKAVDDPRTLNKILYIRPPKNVYSFNELVALWEKKIGKTLEKIYLPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           ++LK IQ++PIP+NV+LA+ ++ FVKGD ANFEI  + GVEASELYP+
Sbjct: 247 QILKQIQESPIPINVILAVNHSIFVKGDGANFEIEESFGVEASELYPD 294

Source: Eucalyptus pyrocarpa

Species: Eucalyptus pyrocarpa

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|149349524|gb|ABR24114.1| eugenol synthase 2 [Clarkia breweri]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/289 (73%), Positives = 240/289 (83%), Gaps = 2/289 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK I+EASVK GHPTFALVRE+T SDPVKGKL+E F+NLGV++LYGDL DH
Sbjct: 8   LIIGGTGYIGKFIVEASVKEGHPTFALVRETTVSDPVKGKLVEKFQNLGVSLLYGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           +SL+KAIKQVDVVISTV   QI +Q KIIAA+KEAGNVKRF PSEFGNDVD   N VEPA
Sbjct: 68  DSLVKAIKQVDVVISTVGFMQIADQTKIIAAIKEAGNVKRFFPSEFGNDVDHV-NAVEPA 126

Query: 125 KS-AYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG 183
           KS A+A K  IRRA+EAEGI YTYV+ NCF GYFLPTL Q GA  PPR+KV I GDGN  
Sbjct: 127 KSVAFAVKANIRRAVEAEGIPYTYVASNCFNGYFLPTLVQPGATTPPRDKVIIPGDGNPK 186

Query: 184 AVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE 243
           A++NKE+DI TYTI ++D PRTLNK LY+RP  N+YSFNELV LWE KIGKTLEK YV E
Sbjct: 187 AIFNKEEDIGTYTIKAVDDPRTLNKILYLRPSNNIYSFNELVALWEKKIGKTLEKIYVPE 246

Query: 244 EKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           E++LKDIQ+APIP+N+ L I ++ FVKGD  NFEI  + GVEASELYPE
Sbjct: 247 EQILKDIQEAPIPINIFLGINHSVFVKGDHTNFEIEPSFGVEASELYPE 295

Source: Clarkia breweri

Species: Clarkia breweri

Genus: Clarkia

Family: Onagraceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|383081911|dbj|BAM05608.1| phenylcoumaran benzylic ether reductase [Eucalyptus pilularis]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/288 (71%), Positives = 240/288 (83%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK I+EAS KAGHPTFALVR+ST SDPVKGKL+E FK+LGV +L GDL DH
Sbjct: 8   LIIGGTGYIGKFIVEASAKAGHPTFALVRQSTVSDPVKGKLVESFKSLGVTLLIGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KAIKQ DVVISTV   Q+ +Q KI+ A+KEAGNVKRF PSEFGNDVDR  + VEPA
Sbjct: 68  ESLVKAIKQADVVISTVGHMQMADQTKIVDAIKEAGNVKRFFPSEFGNDVDRV-HAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           KSA+  K +IRRA EA GI +TYV C CFA YFLPTLAQ G  APP++KVTI GDGNA A
Sbjct: 127 KSAFELKAQIRRAAEAAGIPHTYVPCGCFAAYFLPTLAQPGVTAPPKDKVTIMGDGNAKA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           ++NKEDDIA +TI ++D PRTLNK LY+RPP NVYSFNELV LWE KIGKTLEK Y+ EE
Sbjct: 187 IFNKEDDIAAFTIKAVDDPRTLNKILYVRPPKNVYSFNELVALWEKKIGKTLEKIYLPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           ++LK IQ++PIP+NV+LA+ ++ FVKGD ANFEI  + GVEASELYP+
Sbjct: 247 QILKQIQESPIPINVILAVNHSIFVKGDGANFEIEESFGVEASELYPD 294

Source: Eucalyptus pilularis

Species: Eucalyptus pilularis

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76559892|tpe|CAI56333.1| TPA: isoflavone reductase-like protein 4 [Vitis vinifera]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/288 (70%), Positives = 242/288 (84%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK +++AS K+GHPTFALVREST +DPVKGKLI+ FKN GV +L+GDL DH
Sbjct: 8   LIIGGTGYIGKFVVQASAKSGHPTFALVRESTIADPVKGKLIQEFKNSGVTLLHGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           +SL+KAIKQVDVVISTV   Q+ +Q KIIAA+KEAGNVKRFLPSEFGNDVDR  N VEPA
Sbjct: 68  DSLVKAIKQVDVVISTVGFMQLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRV-NAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           KSA+A K+++RRAIEAEGI YT+V  NCFAGYFLPTL Q G  APPR+KV I GDGN  A
Sbjct: 127 KSAFAAKVQMRRAIEAEGIPYTFVVANCFAGYFLPTLVQPGVSAPPRDKVIILGDGNPKA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
            +N+EDDI TYTI ++D PRTLNK L+I+PP +  SFNELV+LWE+KIGKTLEK YV EE
Sbjct: 187 CFNREDDIGTYTIKAVDDPRTLNKILHIKPPNSTLSFNELVSLWESKIGKTLEKVYVPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           ++LKDIQ+AP+P+NV L+I ++ FV GDQ NFEI  + GVEA ELYP+
Sbjct: 247 QVLKDIQEAPMPINVFLSIQHSVFVNGDQTNFEIEPSFGVEAFELYPD 294

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|149349541|gb|ABR24115.1| eugenol synthase 1 [Petunia x hybrida]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/288 (71%), Positives = 238/288 (82%), Gaps = 1/288 (0%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGTGYIGK ++EAS KAGHPTF LVREST SDP KGK++E F N GV +LYGDL DH
Sbjct: 8   LIIGGTGYIGKFVVEASAKAGHPTFVLVRESTVSDPAKGKIVESFNNSGVTILYGDLYDH 67

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           ESL+KAIKQVDVVISTV + Q+ +Q KIIAA+KEAGN+KRF PSEFG DVD+  N VEPA
Sbjct: 68  ESLVKAIKQVDVVISTVGQMQLADQTKIIAAIKEAGNIKRFFPSEFGMDVDKV-NAVEPA 126

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           KS +A K++IRRAIEAEGI YTYVS NCFAGYFLPTL Q GA  PPR+KV I GDGNA A
Sbjct: 127 KSTFAIKVQIRRAIEAEGIPYTYVSSNCFAGYFLPTLVQPGATDPPRDKVIISGDGNAKA 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
           V+N+E DI TYTI ++D PRTLNKTLYI+PP N  SFNELV +WE  IGKTLEK Y+ EE
Sbjct: 187 VFNEEHDIGTYTIKAVDDPRTLNKTLYIKPPKNTLSFNELVAIWEKLIGKTLEKIYIPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           ++LKDI  +PIP+N++LAI ++TFVKGDQ NF I  + GVEASELYP+
Sbjct: 247 QILKDIATSPIPINIILAINHSTFVKGDQTNFVIEPSFGVEASELYPD 294

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.931	0.877	0.681	7.6e-96
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.934	0.858	0.659	3.8e-94
TAIR|locus:2136383	308	AT4G39230 [Arabidopsis thalian	0.934	0.886	0.667	1.3e-93
TAIR|locus:2025167	322	AT1G75300 [Arabidopsis thalian	0.924	0.838	0.6	8e-85
TAIR|locus:2016482	310	AT1G19540 [Arabidopsis thalian	0.934	0.880	0.582	1.6e-79
TAIR|locus:2139494	306	AT4G34540 [Arabidopsis thalian	0.910	0.869	0.463	1.5e-65
TAIR|locus:2119455	317	PRR2 "pinoresinol reductase 2"	0.928	0.854	0.438	3.3e-56
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.928	0.854	0.446	1.1e-55
ASPGD|ASPL0000047359	312	AN8968 [Emericella nidulans (t	0.523	0.490	0.279	8.7e-13
ASPGD|ASPL0000072559	359	AN8815 [Emericella nidulans (t	0.719	0.584	0.299	1.2e-11

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
 Identities = 188/276 (68%), Positives = 222/276 (80%)

Query:    19 EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
             EAS KAGH TFALVRE+T SDPVKGK ++ FK+LGV +L+GDL DHESL+KAIKQVDVVI
Sbjct:    23 EASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVDVVI 82

Query:    79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
             STV   QI +Q KII+A+KEAGNVKRFLPSEFG DVDR+ + VEPAKSA+A KI+IRR I
Sbjct:    83 STVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTI 141

Query:   139 EAEGIQYTYVSCNCFAGYFLPTLAQI--GAPAPPREKVTIFGDGNAGAVYNKEDDIATYT 196
             EAEGI YTY    CF GY+LPTL Q   G  +PPR+KVTI GDGNA AV NKE+DIA YT
Sbjct:   142 EAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYT 201

Query:   197 INSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIP 256
             I ++D PRTLNK LYI+P  N  S NE+VTLWE KIGK+LEKT++ EE+LLK IQ++PIP
Sbjct:   202 IKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIP 261

Query:   257 LNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
             +NV+L+I +A FV GD  N  I  + GVEASELYP+
Sbjct:   262 INVVLSINHAVFVNGD-TNISIEPSFGVEASELYPD 296

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 182/276 (65%), Positives = 220/276 (79%)

Query:    19 EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
             EASVKAGH T ALVRE++ SDP KGK ++ FK+ GV +L+GDL DHESL+KAIKQ DVVI
Sbjct:    23 EASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTLLHGDLNDHESLVKAIKQADVVI 82

Query:    79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
             STV   QI +Q KII+A+KEAGNVKRFLPSEFG DVD+S + VEPAKSA+  K++ RR I
Sbjct:    83 STVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVDKS-SAVEPAKSAFGRKLQTRRDI 141

Query:   139 EAEGIQYTYVSCNCFAGYFLPTLAQI--GAPAPPREKVTIFGDGNAGAVYNKEDDIATYT 196
             EAEGI YTY+  N FAGY+LPTL Q+  G  +PPR+KV IFGDGN  AV NKE+DIA YT
Sbjct:   142 EAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDKVKIFGDGNVKAVINKEEDIAAYT 201

Query:   197 INSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIP 256
             I ++D PRTLNKTLYI PP N  S NE+VTLWE KIGK++EK Y++EE++ K IQ++P+P
Sbjct:   202 IKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKIGKSVEKIYMSEEQIFKSIQESPVP 261

Query:   257 LNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
              NVLL+I +A FVKGDQ NF I  + G EASELYP+
Sbjct:   262 FNVLLSINHAVFVKGDQTNFTIEPSFGFEASELYPD 297

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)]

 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 183/274 (66%), Positives = 212/274 (77%)

Query:    19 EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
             EAS ++GHPT  LVR ST + P +   IE FKNLGV  L GDL DH SL+ +IKQ DVVI
Sbjct:    22 EASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFLLGDLDDHTSLVNSIKQADVVI 81

Query:    79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
             STV    +  Q KII+A+KEAGNVKRF PSEFGNDVDR   V EPAKSAYA K KIRR I
Sbjct:    82 STVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGNDVDRVFTV-EPAKSAYATKAKIRRTI 140

Query:   139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN 198
             EAEGI YTYVSCN FAGYFLPTLAQ GA + PR+KV + GDGN  AV+NKE+DI TYTIN
Sbjct:   141 EAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIVLGDGNPKAVFNKEEDIGTYTIN 200

Query:   199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLN 258
             ++D PRTLNK LYIRPP N YSFN+LV+LWENKIGKTLE+ YV EE+LLK I ++  PLN
Sbjct:   201 AVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKTLERIYVPEEQLLKQIIESSPPLN 260

Query:   259 VLLAITYATFVKGDQANFEINTASGVEASELYPE 292
             V+L++ +  FVKG   +FEI  + GVEASELYP+
Sbjct:   261 VMLSLCHCVFVKGGHTSFEIEPSFGVEASELYPD 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0032442 "phenylcoumaran benzylic ether reductase activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 174/290 (60%), Positives = 216/290 (74%)

Query:    19 EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
             E S KAG+PTFALVRE++ SDPVK K I+ FK+LGV +L+GDL DHESL+KAIKQVDVVI
Sbjct:    23 EGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTILHGDLNDHESLVKAIKQVDVVI 82

Query:    79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
             ST+   QI +Q KII+A+KEAGNVKRFLP+EFG DV+R+ + VEPAKS +A K++IRRAI
Sbjct:    83 STIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDVERT-SAVEPAKSLFAGKVQIRRAI 141

Query:   139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAP----------------APPREKVTIFGDGNA 182
             EAEGI YTYV  NC AG++L TL Q  +                  PPR+KVTI GDGNA
Sbjct:   142 EAEGIPYTYVVSNCSAGFYLRTLLQFESGLISHTRDKAIIFGDKNVPPRDKVTILGDGNA 201

Query:   183 GAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA 242
               V NKE+D+A Y I ++D  RTLNKTLYI PP N+ S NE+VTLWE KIGK+LEKT+++
Sbjct:   202 KVVINKEEDVAAYMIKAVDDLRTLNKTLYISPPNNILSMNEMVTLWEKKIGKSLEKTHIS 261

Query:   243 EEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
             EE++LK IQ   +P++V  +I +A FVKGDQ +F I    G EAS LYP+
Sbjct:   262 EEQILKSIQ---VPIDVFKSINHAVFVKGDQTSFTIEPWFGEEASVLYPD 308

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 162/278 (58%), Positives = 202/278 (72%)

Query:    19 EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
             E S K+GH TFALVRE++ SDPVK +L+E FK+LGV +LYG L D ESL+KAIKQVDVVI
Sbjct:    20 EESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSLSDKESLVKAIKQVDVVI 79

Query:    79 STVSRGQ--IPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRR 136
             S V R Q  I  Q  II A+KE+GNVKRFLPSEFGNDVDR+   +EP  S +  K +IRR
Sbjct:    80 SAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGNDVDRTV-AIEPTLSEFITKAQIRR 138

Query:   137 AIEAEGIQYTYVSCNCFAGYFLPTLAQ--IGAPAPPREKVTIFGDGNAGAVYNKEDDIAT 194
             AIEA  I YTYV   CFAG F+P L Q  +   +PPR+KV+I+  GN  A+ N E+DI  
Sbjct:   139 AIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKVSIYDTGNGKAIVNTEEDIVA 198

Query:   195 YTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAP 254
             YT+ ++D PRTLNK LYI PP  + S N++V LWE KIGKTLEKTYV+EE+LLK IQ++ 
Sbjct:   199 YTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKIGKTLEKTYVSEEELLKTIQESK 258

Query:   255 IPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
              P++ L+ + +   VK D  +F I+ + GVEASELYPE
Sbjct:   259 PPMDFLVGLIHTILVKSDFTSFTIDPSFGVEASELYPE 296

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 126/272 (46%), Positives = 182/272 (66%)

Query:    21 SVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST 80
             S+++GHPTFAL+R +T SD +K        + GV +L G L+D  SL +A+ +VDVVIS 
Sbjct:    27 SIESGHPTFALIRNTTLSDKLKS-----LSDAGVTLLKGSLEDEGSLAEAVSKVDVVISA 81

Query:    81 VSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA 140
             +    + +Q  ++  +K+AG++KRF+P+E+G + D++Q V +     Y+ K +IR  IE+
Sbjct:    82 IPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANPDKTQ-VSDLDHDFYSKKSEIRHMIES 140

Query:   141 EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI 200
             EGI YTY+ C  F    LP+L Q G  +PP +KVT+FGDGN  AV+  + D+A +TI +I
Sbjct:   141 EGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDKVTVFGDGNVKAVFVNDVDVAAFTIKTI 200

Query:   201 DGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLNVL 260
             D PRTLNKTLY+ PPGN+ S N+LV LWE KI K LEKT+  E +LLK I++ P P N+ 
Sbjct:   201 DDPRTLNKTLYLSPPGNICSMNDLVELWEGKIEKKLEKTFATENQLLKKIKETPYPDNME 260

Query:   261 LAITYATFVKGDQANFEINTASGVEASELYPE 292
             +   Y+ F+KGD   F+I +  GV  +ELYP+
Sbjct:   261 MVFIYSVFIKGDHTYFDIESCGGVNGTELYPD 292

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS

TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 122/278 (43%), Positives = 168/278 (60%)

Query:    20 ASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS 79
             A +  GH T+ L R     D  K +L+  FK LG +++ G   DH+SL+ A+KQVDVV+S
Sbjct:    28 ACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEGSFSDHQSLVSAVKQVDVVVS 87

Query:    80 TVS-----RGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKI 134
              +S        IP Q K++AA+KEAGNVKRFLPSEFG D  R  + + P    +  K++I
Sbjct:    88 AMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDPSRMGHAMPPGSETFDQKMEI 147

Query:   135 RRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT 194
             R AI+A GI +TY+   CFA YF   L+Q+G   PP+ KV I+GDGN   V+  EDD+A 
Sbjct:   148 RNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPPKNKVDIYGDGNVKVVFVDEDDMAK 207

Query:   195 YTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAP 254
             YT  +++ PRTLNKT+Y+RP  N+ +  ELV +WE    K LEKTYV+    L DI+D  
Sbjct:   208 YTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIWEKLTEKELEKTYVSGNDFLADIEDKE 267

Query:   255 IPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
             I     L   Y  + +G   + E+      EA++LYP+
Sbjct:   268 ISHQAGLGHFYHIYYEGCLTDHEVGDDE--EATKLYPD 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 124/278 (44%), Positives = 166/278 (59%)

Query:    20 ASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS 79
             A +  GH T+ L R     +  K +L   FK LG  ++ G   DH+SL+ A+K VDVV+S
Sbjct:    28 ACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEGSFSDHQSLVSAVKLVDVVVS 87

Query:    80 TVS----RGQ-IPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKI 134
              +S    R   I  Q K++ A+KEAGNVKRFLPSEFG D  R  + + P +  +  K+++
Sbjct:    88 AMSGVHFRSHNILVQLKLVEAIKEAGNVKRFLPSEFGMDPPRMGHALPPGRETFDQKMEV 147

Query:   135 RRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT 194
             R+AIEA GI YTYV   CFA YF   L+Q+    PP+EKV I+GDGN   V+  EDDIA 
Sbjct:   148 RQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEKVNIYGDGNVKVVFADEDDIAK 207

Query:   195 YTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAP 254
             YT  +++ PRTLNKT+ IRPP NV +  ELV +WE   GK LEKT +A +  L +I+   
Sbjct:   208 YTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLTGKELEKTNIAAQDFLANIEQME 267

Query:   255 IPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
             IP    +   Y  F +G   + E+      EAS LYP+
Sbjct:   268 IPHQAGIGHFYHIFYEGCLTDHEVGEDE--EASSLYPD 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

ASPGD|ASPL0000047359 AN8968 [Emericella nidulans (taxid:162425)]

 Score = 185 (70.2 bits), Expect = 8.7e-13, P = 8.7e-13
 Identities = 47/168 (27%), Positives = 84/168 (50%)

Query:    42 KGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGN 101
             K K I   +   V++L GD+   + ++KA    D V+S + RG I +Q  ++    E+  
Sbjct:    45 KTKEINALREKAVDILVGDVTSKDEVLKAFDGFDTVVSALGRGVIAQQVHLVQWADESPQ 104

Query:   102 VKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI-EAEGIQYTYVSCNCFAGYFLPT 160
             +KRFLPSE+G D++ S  +    +  +  K+K+R AI E + ++Y +V    +A   +P 
Sbjct:   105 IKRFLPSEYGTDIEYS--LASANEKPHQQKLKVRAAIRETKNLEYAFVVTGPYAD--VPF 160

Query:   161 LAQIGAPAPPR--------EKVTIFGDGNAGAVYNKEDDIATYTINSI 200
                +GA   PR        +K  + GDGN         D+  + ++++
Sbjct:   161 Y--LGASKNPRGGSFDVKNKKAVLLGDGNGRISLVACADVGKFVVHTL 206

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

ASPGD|ASPL0000072559 AN8815 [Emericella nidulans (taxid:162425)]

 Score = 178 (67.7 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 70/234 (29%), Positives = 101/234 (43%)

Query:    21 SVKAG---HPTF---ALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-HESLIKAIKQ 73
             S+ AG   HPTF   AL+R  +A  P     +   ++ GV++   DL+   E L KA+  
Sbjct:    18 SIAAGLLEHPTFEIHALIRPRSAQKPA----VLALQDKGVHIRKCDLKSSEEELEKALSD 73

Query:    74 VDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYA--DK 131
             +DVVIS V   +  +Q  I  A K+AG VKRF+P  F         V  P    +   +K
Sbjct:    74 IDVVISCVGSAEQQDQIPIANAAKKAG-VKRFIPCGF-------ITVAPPGGIMWLRDEK 125

Query:   132 IKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAP-APPREKVTIFGDGNAGAVYNKED 190
               +   I+   + YT +    +     P L       A       I GDGN         
Sbjct:   126 EAVYNHIKQLHLPYTIIDVGWWYQLAYPRLESGKLDYAMTTSNNEIVGDGNTPLALTDLR 185

Query:   191 DIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
             DI  Y    I   RTLNK ++      V + NE+  L E   G+ + + Y++EE
Sbjct:   186 DIGRYVARIITDDRTLNKMVFAY--NTVLTQNEIFGLLEEISGEQITRNYISEE 237

GO:0005622 "intracellular" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P52575	IFR_MEDSA	1, ., 3, ., 1, ., 4, 5	0.5284	0.9794	0.8993	N/A	no
P52577	IFRH_ARATH	1, ., 3, ., 1, ., -	0.6827	0.9794	0.9225	yes	no
P52576	IFR_PEA	1, ., 3, ., 1, ., 4, 5	0.5150	0.9794	0.8993	N/A	no
P52579	IFRH_TOBAC	1, ., 3, ., 1, ., -	0.6319	0.9828	0.9258	N/A	no
P52580	IFRH_MAIZE	1, ., 3, ., 1, ., -	0.5451	0.9828	0.9288	N/A	no
P52578	IFRH_SOLTU	1, ., 3, ., 1, ., -	0.6423	0.9828	0.9318	N/A	no
E1U332	ALL12_OLEEU	1, ., 3, ., 1, ., -	0.6875	0.9828	0.9318	N/A	no
Q00016	IFR_CICAR	1, ., 3, ., 1, ., 4, 5	0.5183	0.9794	0.8993	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.963
3rd Layer	1.17.1.3	LOW CONFIDENCE prediction!
3rd Layer	1.17.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: ifrl4 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (308 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	292
pfam05368	232	pfam05368, NmrA, NmrA-like family	6e-92
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	2e-71
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-20
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	1e-16
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-16
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-16
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-11
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-10
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-09
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	6e-09
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	2e-08
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	6e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-07
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-07
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	4e-07
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	4e-06
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-05
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-05
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	3e-05
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	5e-05
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	1e-04
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-04
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	6e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	8e-04
pfam08659	181	pfam08659, KR, KR domain	9e-04
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	0.001
cd05303	301	cd05303, PGDH_2, Phosphoglycerate dehydrogenase (P	0.003
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	0.003
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	0.003

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score =  271 bits (696), Expect = 6e-92
 Identities = 119/235 (50%), Positives = 145/235 (61%), Gaps = 13/235 (5%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+ G TGY G  ++ AS+KAGHP  ALVR+       K +L +  K  GV ++ GDL DH
Sbjct: 2   LVFGATGYQGGSVVRASLKAGHPVRALVRDP------KSELAKSLKAAGVELVEGDLDDH 55

Query: 65  ESLIKAIKQVDVVISTVS---RGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVV 121
           ESL++A+K VDVV S        +I +  K+  A KEAG VK F+PSEFGNDVDRS N V
Sbjct: 56  ESLVEALKGVDVVFSVTGFWLSKEIEDGKKLADAAKEAG-VKHFIPSEFGNDVDRS-NGV 113

Query: 122 EPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGN 181
           EPA   +  K ++ R I A GI YT+V    F G FL  LA  G  APPR+KVT+ G GN
Sbjct: 114 EPAVPHFDSKAEVERYIRALGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTLLGPGN 173

Query: 182 AGAVYN-KEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKT 235
             AV    E+DI TY I  +D PR L K  YIRPPGN+ S NE+  LW  KIGKT
Sbjct: 174 PKAVPLDDEEDIGTYVIKILDDPRKL-KGKYIRPPGNILSGNEIAELWSKKIGKT 227

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score =  221 bits (566), Expect = 2e-71
 Identities = 94/274 (34%), Positives = 138/274 (50%), Gaps = 20/274 (7%)

Query: 5   LIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
            I G TG +G  I+ A + + G     L R S+ S          F+  GV V+  D   
Sbjct: 3   AIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNE-------FQPSGVKVVPVDYAS 55

Query: 64  HESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEP 123
           HESL+ A+K VD VIS +    I +Q K+I A   AG VKRF+PSEFG D DR      P
Sbjct: 56  HESLVAALKGVDAVISALGGAAIGDQLKLIDAAIAAG-VKRFIPSEFGVDYDR--IGALP 112

Query: 124 AKSAYADKIKIRRAIEA--EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGN 181
               + +K  +RR + A   G+ +TYVS   F  Y L  L  +          TI+GDG 
Sbjct: 113 LLDLFDEKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPLFGVV--DLANRTATIYGDGE 170

Query: 182 AGAVYNKEDDIATYTINSIDGP-RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTY 240
               +   +DI      ++  P RTLN+ +++   G+V + NEL+ L E   G+  E+TY
Sbjct: 171 TKFAFTTLEDIGRAVARALTHPDRTLNRVVFVA--GDVVTQNELIALVERVTGRKFERTY 228

Query: 241 VAEEKLLKDIQDAP--IPLNVLLAITYATFVKGD 272
           V+EE+LL+++ +A     LN ++A  +   + G 
Sbjct: 229 VSEEELLEELIEAAPAGLLNYVIAFLHGLGIGGG 262

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 85.9 bits (213), Expect = 2e-20
 Identities = 50/219 (22%), Positives = 76/219 (34%), Gaps = 55/219 (25%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LI+G TG+IG+ +    ++ GH    LVR +        +L +      V V+ GDL+D 
Sbjct: 2   LILGATGFIGRALARELLEQGHEVTLLVRNTK-------RLSKED-QEPVAVVEGDLRDL 53

Query: 65  ESLIKAIKQVDVVISTVS--------RGQIPEQAK-IIAAVKEAGNVKRFLPSEFGNDV- 114
           +SL  A++ VDVVI                 E  + ++ A KEAG VK F+         
Sbjct: 54  DSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFISSLGAYG 112

Query: 115 -DRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK 173
               +    P+    A K K    +    + YT V      G                  
Sbjct: 113 DLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG------------------ 154

Query: 174 VTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI 212
                            D+A    N++  P   N+T   
Sbjct: 155 -----------------DLARAIANAVVTPGKKNETFNA 176

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 78/278 (28%), Positives = 113/278 (40%), Gaps = 32/278 (11%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+ G TG +G  ++E  +       ALVR     +P K K    F   GV V  GD  D 
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVR-----NPEKAKA---FAADGVEVRQGDYDDP 53

Query: 65  ESLIKAIKQVDVV--ISTVSRG-QIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVV 121
           E+L +A + VD +  IS      +I +    I A K+AG VK  +        + S    
Sbjct: 54  ETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAKQAG-VKHIVYLSASGADEDS---- 108

Query: 122 EPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIF---G 178
            P   A  D     + +EA GI YT +    F    L  L  I       E+ TI+   G
Sbjct: 109 -PFLLA-RDHGATEKYLEASGIPYTILRPGWFMDNLLEFLPSI------LEEGTIYGPAG 160

Query: 179 DGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEK 238
           DG    V     DIA     ++  P    K   +  P    S+ EL  +    +GK +  
Sbjct: 161 DGKVAFV--DRRDIAEAAAAALTEPGHEGKVYNLTGP-EALSYAELAAILSEALGKPVRY 217

Query: 239 TYVAEEKLLKDIQDAPIPLNV--LLAITYATFVKGDQA 274
             V+ ++  +++  A +P     LLA  YA   KG+ A
Sbjct: 218 VPVSPDEAARELLAAGLPEGFAALLASLYAAIRKGELA 255

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 63/217 (29%), Positives = 92/217 (42%), Gaps = 33/217 (15%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L++G TG +G+ ++   +  G+   ALVR     DP + + +E     G  V+ GDL D 
Sbjct: 3   LVVGATGKVGRHVVRELLDRGYQVRALVR-----DPSQAEKLE---AAGAEVVVGDLTDA 54

Query: 65  ESLIKAIKQVDVVISTV-SRGQIPE---------QAKIIAAVKEAGNVKRF-LPSEFGND 113
           ESL  A++ +D VIS   S G+               +I A K+AG VKRF L S  G  
Sbjct: 55  ESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSSIG-- 111

Query: 114 VDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK 173
            D+  + +E        K K    + A G+ YT V      G      A  G       +
Sbjct: 112 ADKPSHPLEALGPYLDAKRKAEDYLRASGLDYTIVR----PGGLTDDPAGTG-------R 160

Query: 174 VTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL 210
           V + GDG          D+A     ++D P  + KT 
Sbjct: 161 VVLGGDGTRLDGPISRADVAEVLAEALDTPAAIGKTF 197

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 50/227 (22%), Positives = 86/227 (37%), Gaps = 41/227 (18%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            IIG TG  G  I+  ++  GH   ALVR     DP   KL    + L   V+ GD+ D 
Sbjct: 3   AIIGATGRTGSAIVREALARGHEVTALVR-----DP--AKLPAEHEKL--KVVQGDVLDL 53

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAK--------IIAAVKEAGNVKRF--------LPS 108
           E + +A++  D VIS +                  I++A+K AG VKR         L  
Sbjct: 54  EDVKEALEGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAG-VKRLIVVGGAGSLDD 112

Query: 109 EFGNDVDRSQNVVEPA-KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAP 167
                +     +  PA +    D  ++ + +   G+ +T V               +   
Sbjct: 113 RPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVR-----------PPALFDG 161

Query: 168 APPREKVTIFGDGNA--GAVYNKEDDIATYTINSIDGPRTLNKTLYI 212
                   +    +A  G+  ++  D+A + ++ ++ P  + K   I
Sbjct: 162 GATGGYYRVELLVDAKGGSRISRA-DLAIFMLDELETPEHVRKRPTI 207

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 40/180 (22%), Positives = 61/180 (33%), Gaps = 22/180 (12%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVR-ESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
            +IG TG  G+++++  +  GH   AL R  S A  P            GV  +  DL D
Sbjct: 2   AVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAP------------GVTPVQKDLFD 49

Query: 64  HESLIKAIKQVDVVISTVSRGQIPEQA--KIIAAVKEAGNVKRF-LPSEFGNDVDRSQNV 120
              L +A+  VD V+               ++ A   AG V+R  + S  G   D     
Sbjct: 50  LADLAEALAGVDAVVDAFGARPDDSDGVKHLLDAAARAG-VRRIVVVSAAGLYRDEPGTF 108

Query: 121 VEPA----KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI 176
                         K      + A G+ +T V              +IG    P  + +I
Sbjct: 109 RLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFD-EEGETYEIGTEGDPAGESSI 167

Length = 182

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 60.3 bits (146), Expect = 1e-10
 Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 31/232 (13%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+ G TG++G  ++   +  GH   A VR   A+  + G         GV V+ GDL+D 
Sbjct: 4   LVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAG---------GVEVVLGDLRDP 54

Query: 65  ESLIKAIKQVD--VVISTVSRGQIPEQAK----IIAAVKEAGN-VKRFLP-SEFGNDVDR 116
           +SL+   K VD  ++IS +  G    +A     ++ A + AG  VK  +  S  G D   
Sbjct: 55  KSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA- 113

Query: 117 SQNVVEPAKSAYAD-KIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT 175
                  + SA A  K  +  A+ + GI YT +     A Y     A I A       V 
Sbjct: 114 -------SPSALARAKAAVEAALRSSGIPYTTLRRA--AFYLGAGAAFIEAAEAAGLPVI 164

Query: 176 IFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTL 227
             G G    +    DD+A     ++D P T  +T  +  P    +  EL + 
Sbjct: 165 PRGIGRLSPIA--VDDVAEALAAALDAPATAGRTYELAGP-EALTLAELASG 213

Length = 275

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 63/262 (24%), Positives = 101/262 (38%), Gaps = 59/262 (22%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L++G TGYIGK ++   V+ G+   A+ RE +      GK     +  G  V++GD+ D 
Sbjct: 64  LVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA 123

Query: 65  ESLIKAIKQ----VDVVISTV-SRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQN 119
           +SL K +      VDVV+S + SR            VK++  +          D   ++N
Sbjct: 124 DSLRKVLFSEGDPVDVVVSCLASRTGG---------VKDSWKI----------DYQATKN 164

Query: 120 VVEPAKSAYADKIKIRRAI----------------EAE------GIQYTYVSCNCF---- 153
            ++  +   A    +  AI                EAE         Y+ V    F    
Sbjct: 165 SLDAGREVGAKHFVLLSAICVQKPLLEFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSL 224

Query: 154 AGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYN-KEDDIATYTINSIDGPRTLNKTLYI 212
            G     + + G P        +FGDG   A     E D+A++  + +     +NK L I
Sbjct: 225 GGQV--EIVKDGGP------YVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPI 276

Query: 213 RPPGNVYSFNELVTLWENKIGK 234
             PG   +  E   +    +GK
Sbjct: 277 GGPGKALTPLEQGEMLFRILGK 298

Length = 390

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 6  IIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE 65
          + G TG+IG  ++   V AGH    L R    +           +  G  V  GDL+D +
Sbjct: 5  VTGATGFIGSAVVRELVAAGHEVVGLARSDAGA--------AKLEAAGAQVHRGDLEDLD 56

Query: 66 SLIKAIKQVDVVIST 80
           L KA  + D VI  
Sbjct: 57 ILRKAAAEADAVIHL 71

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 34/249 (13%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+IG TG +G++I+  ++  G+    LVR    +           K  G  ++YGDL   
Sbjct: 4   LVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS--------FLKEWGAELVYGDLSLP 55

Query: 65  ESLIKAIKQVDVVIST-VSRGQIPEQAK---------IIAAVKEAGNVKRFLPSEFGNDV 114
           E+L  + K V  +I    SR      AK         +I A K A  +KRF+   F + +
Sbjct: 56  ETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFI---FFSIL 111

Query: 115 DRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV 174
           +  Q    P       K  I + ++  GI YT       AG+F   ++Q   P   ++ +
Sbjct: 112 NAEQYPYIPLMKL---KSDIEQKLKKSGIPYTIFRL---AGFFQGLISQYAIPILEKQPI 165

Query: 175 TIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFN--ELVTLWENKI 232
            I  + +    Y    D A + + S+  P T NKT    P     S+N  E+++L E   
Sbjct: 166 WITNE-STPISYIDTQDAAKFCLKSLSLPETKNKTF---PLVGPKSWNSSEIISLCEQLS 221

Query: 233 GKTLEKTYV 241
           G+  + + V
Sbjct: 222 GQKAKISRV 230

Length = 317

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 18/108 (16%)

Query: 6   IIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE 65
           IIG +G  G +IL+ ++K GH   A+VR     +  K    +     GV +L  D+ D  
Sbjct: 5   IIGASGKAGSRILKEALKRGHEVTAIVR-----NASKLAARQ-----GVTILQKDIFDLT 54

Query: 66  SLIKAIKQVDVVISTVSRGQIPEQAK-------IIAAVKEAGNVKRFL 106
           SL   +   D VIS    G              +I A+K AG V R L
Sbjct: 55  SLASDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGAG-VPRLL 101

Length = 211

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 22/115 (19%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+ G TG++G  ++ A +  G+   ALVR                  L V V+ GDL D 
Sbjct: 2   LVTGATGFLGSNLVRALLAQGYRVRALVRS---GSDAVL-----LDGLPVEVVEGDLTDA 53

Query: 65  ESLIKAIKQVDVV-----ISTVSRGQIPEQAKI--------IAAVKEAGNVKRFL 106
            SL  A+K  D V      +++      E  +         + A  EAG V+R +
Sbjct: 54  ASLAAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAG-VRRVV 107

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 65/271 (23%), Positives = 102/271 (37%), Gaps = 53/271 (19%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LIIGGT +IGK ++E  + AGH      R  T          +     GV  + GD  D 
Sbjct: 4   LIIGGTRFIGKALVEELLAAGHDVTVFNRGRT----------KPDLPEGVEHIVGDRNDR 53

Query: 65  ESLIKAIK--QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKR--FLPS-----EFGNDVD 115
           ++L + +     DVV+ T++    P Q +      + G VK+  F+ S     + G  + 
Sbjct: 54  DALEELLGGEDFDVVVDTIAY--TPRQVERALDAFK-GRVKQYIFISSASVYLKPGRVIT 110

Query: 116 RSQNVVEPAKSAYAD-----KIKI---RRAIEAEGIQYTYVSCNCFAGYFLPT------- 160
            S  + EP     +D     + K       IEA    YT V      G    T       
Sbjct: 111 ESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFF 170

Query: 161 --LAQ---IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPP 215
             LA+   I  P      V          ++ K  D+A   + +   P+ +     I   
Sbjct: 171 DRLARGRPILVPGDGHSLVQF--------IHVK--DLARALLGAAGNPKAIGGIFNITGD 220

Query: 216 GNVYSFNELVTLWENKIGKTLEKTYVAEEKL 246
             V +++EL+      +GK  E  +V E+ L
Sbjct: 221 EAV-TWDELLEACAKALGKEAEIVHVEEDFL 250

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 55/250 (22%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            + G TG+IG+ ++    K G       R     +    +L+ +     V  +  DL+D 
Sbjct: 4   TVFGATGFIGRYVVNRLAKRGSQVIVPYR----CEAYARRLLVMGDLGQVLFVEFDLRDD 59

Query: 65  ESLIKAIKQVDVVISTVSRGQIP----------EQAKIIA-AVKEAGNVKRFL------- 106
           ES+ KA++  DVVI+ V R              E  + +A A KEAG V+R +       
Sbjct: 60  ESIRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAG-VERLIHISALGA 118

Query: 107 ----PSEFGNDVDRSQNVVEPA-KSAYADKIKIRRAI----EAEGIQYTYVSCNCFAGYF 157
               PS++     RS+   E A + A+ +   +R ++    E   +   +         F
Sbjct: 119 DANSPSKYL----RSKAEGEEAVREAFPEATIVRPSVVFGREDRFLNR-FAK----LLAF 169

Query: 158 LPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGN 217
           LP    IG     + K           VY    D+A     ++  P T  KT  +  P  
Sbjct: 170 LPFPPLIG---GGQTKFQ--------PVY--VGDVAEAIARALKDPETEGKTYELVGP-K 215

Query: 218 VYSFNELVTL 227
           VY+  ELV L
Sbjct: 216 VYTLAELVEL 225

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 17/109 (15%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+ G TG IG K+    ++AG P  ALVR    +              G  V+ GDL D 
Sbjct: 2   LVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAA--------LAARGAEVVVGDLDDP 53

Query: 65  ESLIKAIKQVDVV--------ISTVSRGQIPEQAKIIAAVKEAGNVKRF 105
             L  A+  VD V         +    G +       +A++EAG VKR 
Sbjct: 54  AVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAG-VKRV 101

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 23/120 (19%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVN-----VLYG 59
           L+ G TG+I   I+E  +KAG+     VR  + S  +K     + K  G N     V+  
Sbjct: 3   LVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLK----ALLKAAGYNDRLEFVIVD 58

Query: 60  DLQDHESLIKAIKQVDVVISTVS----RGQIPEQAKIIAAV----------KEAGNVKRF 105
           DL    +  +A+K VD VI   S     G   E   I  AV          K AG+VKR 
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRV 118

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 40/214 (18%), Positives = 76/214 (35%), Gaps = 48/214 (22%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+ GGTG+IG  ++   ++ G+    L R   +     G          +    GDL D 
Sbjct: 2   LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTG---------RIRFHEGDLTDP 52

Query: 65  ESLIKAIK--QVDVVISTVSRGQIPEQAK---------------IIAAVKEAGNVKRFL- 106
           ++L + +   Q D VI   ++  +    +               ++ A + AG VKRF+ 
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFVF 111

Query: 107 ---PSEFGNDVDR------SQNVVEP---AKSAYADKIKIRRAIEAEGIQYTYVSCNCFA 154
                 +G+  D           + P   AK   A+++ +     A G++   +      
Sbjct: 112 ASSSEVYGDVADPPITEDTPLGPLSPYAAAK-LAAERL-VEAYARAYGLRAVILRLFNVY 169

Query: 155 GYFLPT------LAQIGAPAPPREKVTIFGDGNA 182
           G   P       +  +       + + + GDG  
Sbjct: 170 GPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQ 203

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 66/263 (25%), Positives = 99/263 (37%), Gaps = 45/263 (17%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTF---ALVRESTASDPVKGKLIEIFKNLGVNVLYGDL 61
           L+ G TG  G  ++ A +K   P F   AL R     DP       +    GV V+ GDL
Sbjct: 2   LVFGATGKQGGSVVRALLK--DPGFKVRALTR-----DPSSPAAKAL-AAPGVEVVQGDL 53

Query: 62  QDHESLIKAIKQVD---VVISTVSRGQIPE--QAKIIA-AVKEAGNVKRFLPSEFGNDVD 115
            D ESL  A+K V    +V      G   E  Q K +  A K AG V+ F+ S    DV+
Sbjct: 54  DDPESLEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAG-VQHFVFSSVP-DVE 111

Query: 116 RSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYV----SCNCFAGYFLPTLAQIG-----A 166
           +    V      +  K ++   I A G+  T +        F     P   + G      
Sbjct: 112 KLTLAVP----HFDSKAEVEEYIRASGLPATILRPAFFMENFLTPPAPQKMEDGTLTLVL 167

Query: 167 PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVT 226
           P  P  K+ +    + G                 D  +   KT+ +   G+  +  E+  
Sbjct: 168 PLDPDTKLPMIDVADIG-------PAVAAIFK--DPAKFNGKTIEL--AGDELTPEEIAA 216

Query: 227 LWENKIGKTLEKTYVAEEKLLKD 249
            +   +GK    TYV  E+ L++
Sbjct: 217 AFSKVLGK--PVTYVQVEEWLRE 237

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 16/58 (27%), Positives = 30/58 (51%)

Query: 49  FKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL 106
            K+  V V+ GD  + + L  A++  DVV + +    + +QA+ +    +A  VKR +
Sbjct: 41  LKSARVTVVEGDALNSDDLKAAMRGQDVVYANLGGTDLDQQAENVVQAMKAVGVKRLI 98

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 11/79 (13%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVR--ESTASDPVKGKLIEIFKNLGVNVLYGDLQ 62
          L+ G TGY+G +++   ++ GH   ALVR  E  A  P             V V+ GDL+
Sbjct: 2  LVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSE---------RVTVVRGDLE 52

Query: 63 DHESLIKAIKQVDVVISTV 81
          D ESL  A++ +D     V
Sbjct: 53 DPESLRAALEGIDTAYYLV 71

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFKNLGV-NVLYGDLQ 62
           L+ GG G++G+ I+   ++ G      ++E    D     +L+E F  L V   + GD+ 
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGE-----LQEVRVFDLRFSPELLEDFSKLQVITYIEGDVT 55

Query: 63  DHESLIKAIKQVDVVISTVS----RGQIPEQAKIIAAVKEAGNV 102
           D + L +A++  DVVI T +     G+      +   VK   NV
Sbjct: 56  DKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNV 99

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 4  TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
           L+ G TG++G  ++   ++ G     LVR ++    ++G        L V ++ GDL+D
Sbjct: 3  VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG--------LDVEIVEGDLRD 54

Query: 64 HESLIKAIKQVDVVI 78
            SL KA+     + 
Sbjct: 55 PASLRKAVAGCRALF 69

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 39.9 bits (93), Expect = 8e-04
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 27/119 (22%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L+ GG G+IG  ++E  + AGH    L R     DP+           GV  +  DL D 
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLS---------GVEFVVLDLTDR 54

Query: 65  ESLIKAIKQV-DVVI-----STVSRGQIPEQAK-----------IIAAVKEAGNVKRFL 106
           + + +  K V D VI     S+V      + A+           ++ A + AG VKRF+
Sbjct: 55  DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFV 112

Length = 314

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 39.0 bits (92), Expect = 9e-04
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLY--GDLQ 62
          L+ GG G +G ++     + G     L+  S A DP    L+   +  G  V     D+ 
Sbjct: 4  LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 63 DHESLIKAIKQVD 75
          D +++   + ++ 
Sbjct: 64 DRDAVRALLAEIR 76

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 17/103 (16%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            ++G +G IG+++     + G     + R  + S       +EI           D  D 
Sbjct: 3   HVLGASGPIGREVARELRRRGWDVRLVSR--SGSKLAWLPGVEIVA--------ADAMDA 52

Query: 65  ESLIKAIKQVDVVISTV-------SRGQIPEQAKIIAAVKEAG 100
            S+I A +  DV+                P    ++AA +  G
Sbjct: 53  SSVIAAARGADVIYHCANPAYTRWEELFPPLMENVVAAAEANG 95

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|240628 cd05303, PGDH_2, Phosphoglycerate dehydrogenase (PGDH) NAD-binding and catalytic domains

 Score = 38.3 bits (90), Expect = 0.003
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 37 ASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
           +D +    IE  +  G  V Y  L   E L++ IK  DV+I
Sbjct: 5  ITDGIDEIAIEKLEEAGFEVDYEPLIAKEELLEKIKDYDVLI 46

Phosphoglycerate dehydrogenase (PGDH) catalyzes the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDH comes in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Length = 301

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          LI+GG G+IG  +++A ++ G       R                   GV+ + GD ++ 
Sbjct: 3  LIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPP---------YELPLGGVDYIKGDYENR 53

Query: 65 ESLIKAIKQVDVVISTVS 82
            L  A+  +D VI   S
Sbjct: 54 ADLESALVGIDTVIHLAS 71

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 4  TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL-GVNVLYGDLQ 62
            + GGTG++G+ +++  ++ G     LVR S +      ++ E       V VL GDL 
Sbjct: 1  VFVTGGTGFLGRHLVKRLLENGFKVLVLVR-SESLGEAHERIEEAGLEADRVRVLEGDLT 59

Query: 63 ------DHESLIKAIKQVDVVI 78
                   +  +   +VD VI
Sbjct: 60 QPNLGLSAAASRELAGKVDHVI 81

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	292
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.98
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.97
PLN02572	442	UDP-sulfoquinovose synthase	99.97
PLN02427	386	UDP-apiose/xylose synthase	99.97
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.97
PLN00016	378	RNA-binding protein; Provisional	99.96
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.96
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.96
PLN02206	442	UDP-glucuronate decarboxylase	99.96
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.96
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
PLN02214	342	cinnamoyl-CoA reductase	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.95
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.95
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.95
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.95
PLN00198	338	anthocyanidin reductase; Provisional	99.95
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.95
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.95
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.95
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.95
PLN02650	351	dihydroflavonol-4-reductase	99.95
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.95
PLN02653	340	GDP-mannose 4,6-dehydratase	99.95
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.95
PLN02240	352	UDP-glucose 4-epimerase	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.95
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.94
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.94
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.94
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.94
PRK05865	854	hypothetical protein; Provisional	99.94
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.94
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.94
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.94
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.94
PLN02996	491	fatty acyl-CoA reductase	99.93
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.93
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.93
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.93
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.93
PLN02583	297	cinnamoyl-CoA reductase	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.92
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.92
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.91
PLN02778	298	3,5-epimerase/4-reductase	99.9
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.9
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.88
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.88
PRK12320	699	hypothetical protein; Provisional	99.88
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.87
PRK06482	276	short chain dehydrogenase; Provisional	99.85
COG2910	211	Putative NADH-flavin reductase [General function p	99.84
PRK08263	275	short chain dehydrogenase; Provisional	99.83
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.83
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.83
PLN02260	668	probable rhamnose biosynthetic enzyme	99.83
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.82
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.82
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.82
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.81
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.81
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07806	248	short chain dehydrogenase; Provisional	99.81
PRK06182	273	short chain dehydrogenase; Validated	99.81
PRK05875	276	short chain dehydrogenase; Provisional	99.8
PRK06180	277	short chain dehydrogenase; Provisional	99.8
PRK07074	257	short chain dehydrogenase; Provisional	99.79
PRK06194	287	hypothetical protein; Provisional	99.78
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.77
PRK07067	257	sorbitol dehydrogenase; Provisional	99.77
PRK10538	248	malonic semialdehyde reductase; Provisional	99.77
PRK06138	252	short chain dehydrogenase; Provisional	99.77
PRK07825	273	short chain dehydrogenase; Provisional	99.77
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.77
PRK09291	257	short chain dehydrogenase; Provisional	99.77
PRK12828	239	short chain dehydrogenase; Provisional	99.77
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK07775	274	short chain dehydrogenase; Provisional	99.76
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.76
PRK06914	280	short chain dehydrogenase; Provisional	99.75
PRK09135	249	pteridine reductase; Provisional	99.75
PRK05876	275	short chain dehydrogenase; Provisional	99.75
PRK08219	227	short chain dehydrogenase; Provisional	99.75
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK08017	256	oxidoreductase; Provisional	99.74
PRK12746	254	short chain dehydrogenase; Provisional	99.74
PRK12829	264	short chain dehydrogenase; Provisional	99.74
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.73
PRK09186	256	flagellin modification protein A; Provisional	99.73
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.73
PRK05650	270	short chain dehydrogenase; Provisional	99.73
PRK12827	249	short chain dehydrogenase; Provisional	99.73
PRK06841	255	short chain dehydrogenase; Provisional	99.72
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.72
PRK06181	263	short chain dehydrogenase; Provisional	99.72
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK06179	270	short chain dehydrogenase; Provisional	99.72
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.71
PRK07454	241	short chain dehydrogenase; Provisional	99.71
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.71
PRK07774	250	short chain dehydrogenase; Provisional	99.71
PRK07060	245	short chain dehydrogenase; Provisional	99.71
PRK08267	260	short chain dehydrogenase; Provisional	99.71
PRK12939	250	short chain dehydrogenase; Provisional	99.7
PRK05993	277	short chain dehydrogenase; Provisional	99.7
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.7
PRK07890	258	short chain dehydrogenase; Provisional	99.7
PRK07024	257	short chain dehydrogenase; Provisional	99.7
PRK06128	300	oxidoreductase; Provisional	99.69
PRK08324	681	short chain dehydrogenase; Validated	99.69
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.69
PRK07102	243	short chain dehydrogenase; Provisional	99.69
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK06701	290	short chain dehydrogenase; Provisional	99.68
PRK07326	237	short chain dehydrogenase; Provisional	99.68
PRK07904	253	short chain dehydrogenase; Provisional	99.68
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.68
PRK08265	261	short chain dehydrogenase; Provisional	99.68
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.68
PRK07041	230	short chain dehydrogenase; Provisional	99.68
PRK05717	255	oxidoreductase; Validated	99.68
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.68
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.68
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.68
PRK07814	263	short chain dehydrogenase; Provisional	99.67
PRK07577	234	short chain dehydrogenase; Provisional	99.67
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.67
PRK07109	334	short chain dehydrogenase; Provisional	99.67
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.67
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12744	257	short chain dehydrogenase; Provisional	99.67
PRK08628	258	short chain dehydrogenase; Provisional	99.67
PRK09134	258	short chain dehydrogenase; Provisional	99.67
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.66
PRK08643	256	acetoin reductase; Validated	99.66
PRK05693	274	short chain dehydrogenase; Provisional	99.66
PLN02253	280	xanthoxin dehydrogenase	99.66
PRK06196	315	oxidoreductase; Provisional	99.66
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK07478	254	short chain dehydrogenase; Provisional	99.66
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.65
PRK06101	240	short chain dehydrogenase; Provisional	99.65
PRK12937	245	short chain dehydrogenase; Provisional	99.65
PRK12743	256	oxidoreductase; Provisional	99.65
PRK07063	260	short chain dehydrogenase; Provisional	99.65
PRK06398	258	aldose dehydrogenase; Validated	99.65
PRK08226	263	short chain dehydrogenase; Provisional	99.65
PRK06924	251	short chain dehydrogenase; Provisional	99.65
PRK06500	249	short chain dehydrogenase; Provisional	99.65
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.65
PRK05866	293	short chain dehydrogenase; Provisional	99.65
PRK08589	272	short chain dehydrogenase; Validated	99.64
PRK08339	263	short chain dehydrogenase; Provisional	99.64
PRK06123	248	short chain dehydrogenase; Provisional	99.64
PRK07035	252	short chain dehydrogenase; Provisional	99.64
PRK06114	254	short chain dehydrogenase; Provisional	99.64
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.64
PRK05867	253	short chain dehydrogenase; Provisional	99.64
PRK07985	294	oxidoreductase; Provisional	99.63
PRK07069	251	short chain dehydrogenase; Validated	99.63
PRK07856	252	short chain dehydrogenase; Provisional	99.63
PRK06523	260	short chain dehydrogenase; Provisional	99.63
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.63
PRK06139	330	short chain dehydrogenase; Provisional	99.63
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.63
PRK08264	238	short chain dehydrogenase; Validated	99.63
PRK09242	257	tropinone reductase; Provisional	99.63
PRK06172	253	short chain dehydrogenase; Provisional	99.62
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.62
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.62
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.62
PRK06057	255	short chain dehydrogenase; Provisional	99.62
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.62
PRK08251	248	short chain dehydrogenase; Provisional	99.62
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.61
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.61
PRK07023	243	short chain dehydrogenase; Provisional	99.61
PRK06949	258	short chain dehydrogenase; Provisional	99.6
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.6
PRK06483	236	dihydromonapterin reductase; Provisional	99.6
PRK08177	225	short chain dehydrogenase; Provisional	99.6
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
PRK12742	237	oxidoreductase; Provisional	99.59
PRK09072	263	short chain dehydrogenase; Provisional	99.59
KOG2774	366	consensus NAD dependent epimerase [General functio	99.59
PRK12747	252	short chain dehydrogenase; Provisional	99.59
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.59
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.58
PRK07062	265	short chain dehydrogenase; Provisional	99.58
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.58
PRK07832	272	short chain dehydrogenase; Provisional	99.58
PRK07831	262	short chain dehydrogenase; Provisional	99.58
PRK07576	264	short chain dehydrogenase; Provisional	99.58
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.57
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.57
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK06198	260	short chain dehydrogenase; Provisional	99.56
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.56
PRK05872	296	short chain dehydrogenase; Provisional	99.56
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.56
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.56
PRK07677	252	short chain dehydrogenase; Provisional	99.55
PRK06484	520	short chain dehydrogenase; Validated	99.55
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.55
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.55
PRK05855	582	short chain dehydrogenase; Validated	99.55
PRK08703	239	short chain dehydrogenase; Provisional	99.54
PRK06125	259	short chain dehydrogenase; Provisional	99.54
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.54
PRK06953	222	short chain dehydrogenase; Provisional	99.54
PRK06940	275	short chain dehydrogenase; Provisional	99.53
PRK08278	273	short chain dehydrogenase; Provisional	99.53
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.53
PRK06197	306	short chain dehydrogenase; Provisional	99.52
PRK05884	223	short chain dehydrogenase; Provisional	99.51
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.51
PRK05599	246	hypothetical protein; Provisional	99.5
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.5
PRK07201	657	short chain dehydrogenase; Provisional	99.5
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.49
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.49
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.49
PRK07578	199	short chain dehydrogenase; Provisional	99.48
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.47
PRK12367	245	short chain dehydrogenase; Provisional	99.47
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.46
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.45
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.45
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.45
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.45
PRK07791	286	short chain dehydrogenase; Provisional	99.45
PRK06484	520	short chain dehydrogenase; Validated	99.45
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.45
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.43
PRK05854	313	short chain dehydrogenase; Provisional	99.43
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.42
PLN02780	320	ketoreductase/ oxidoreductase	99.42
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.42
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.41
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.41
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.37
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.37
PRK08862	227	short chain dehydrogenase; Provisional	99.36
PRK08303	305	short chain dehydrogenase; Provisional	99.34
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.33
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.27
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.27
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.26
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.23
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.21
KOG0725	270	consensus Reductases with broad range of substrate	99.19
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.19
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.18
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.17
PLN00015	308	protochlorophyllide reductase	99.16
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.15
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.13
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.13
PRK08309	177	short chain dehydrogenase; Provisional	99.12
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.1
KOG1208	314	consensus Dehydrogenases with different specificit	99.1
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.07
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.07
COG1028	251	FabG Dehydrogenases with different specificities (	99.06
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.93
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.93
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.87
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.86
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.85
PRK06720	169	hypothetical protein; Provisional	98.8
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.76
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.75
PTZ00325	321	malate dehydrogenase; Provisional	98.66
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.58
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.58
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.55
PRK09620	229	hypothetical protein; Provisional	98.54
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.45
PLN00106	323	malate dehydrogenase	98.43
COG3268	382	Uncharacterized conserved protein [Function unknow	98.31
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.31
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.28
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.27
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.25
PRK05086	312	malate dehydrogenase; Provisional	98.24
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.21
PRK14982	340	acyl-ACP reductase; Provisional	98.21
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.2
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.15
PRK04148	134	hypothetical protein; Provisional	98.13
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	98.13
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.11
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.09
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.08
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	98.06
PRK09496	453	trkA potassium transporter peripheral membrane com	98.06
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	98.04
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.02
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	98.01
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.97
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.94
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.9
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.87
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	97.86
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	97.84
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.83
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.81
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.76
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.76
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.76
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.73
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.73
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.71
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.7
PRK09496	453	trkA potassium transporter peripheral membrane com	97.69
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.63
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.61
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.61
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.56
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.54
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.54
PLN02383	344	aspartate semialdehyde dehydrogenase	97.52
PRK10669	558	putative cation:proton antiport protein; Provision	97.52
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.49
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	97.48
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.48
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.43
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.43
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.38
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.37
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	97.37
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	97.36
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.35
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	97.33
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.31
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.29
PRK06223	307	malate dehydrogenase; Reviewed	97.29
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.28
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.27
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	97.26
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.25
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.24
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.22
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.22
PRK08223	287	hypothetical protein; Validated	97.22
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.2
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.2
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.19
PRK13304	265	L-aspartate dehydrogenase; Reviewed	97.18
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.16
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.16
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.16
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.14
PRK08655	437	prephenate dehydrogenase; Provisional	97.14
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.13
PRK13303	265	L-aspartate dehydrogenase; Provisional	97.13
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.13
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.12
TIGR00036	266	dapB dihydrodipicolinate reductase.	97.12
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.11
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.09
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	97.08
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	97.03
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.03
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.03
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.02
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.01
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.01
PF10100	429	DUF2338: Uncharacterized protein conserved in bact	97.0
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	97.0
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.0
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.98
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.98
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.98
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.97
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.96
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.95
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.94
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.94
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.94
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.94
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.94
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.93
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.92
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.92
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.88
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.88
PRK07417	279	arogenate dehydrogenase; Reviewed	96.87
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.87
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.86
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.85
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	96.84
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.84
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.84
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.83
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.82
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.81
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.81
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.8
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.8
PRK05442	326	malate dehydrogenase; Provisional	96.79
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.79
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.78
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.78
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.77
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.77
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.77
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	96.76
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.75
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.75
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.74
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.73
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	96.72
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.71
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.71
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.7
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.69
PLN02928	347	oxidoreductase family protein	96.69
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.68
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.66
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.64
PLN00203	519	glutamyl-tRNA reductase	96.64
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.64
PRK08818	370	prephenate dehydrogenase; Provisional	96.63
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.61
PRK10537	393	voltage-gated potassium channel; Provisional	96.6
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.6
COG0743	385	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	96.59
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.58
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.58
PRK08328	231	hypothetical protein; Provisional	96.58
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.57
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.57
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.57
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.55
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.55
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.54
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.49
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.49
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.48
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	96.48
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.47
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.46
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.46
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.46
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.45
PRK08462	445	biotin carboxylase; Validated	96.45
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.45
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.44
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	96.44
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.43
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.43
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.43
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.41
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.41
PRK14851	679	hypothetical protein; Provisional	96.4
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.4
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	96.38
PRK07574	385	formate dehydrogenase; Provisional	96.37
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	96.36
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.36
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.35
PTZ00117	319	malate dehydrogenase; Provisional	96.35
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.35
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.34
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.34
PLN02602	350	lactate dehydrogenase	96.32
PLN02688	266	pyrroline-5-carboxylate reductase	96.31
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.31
PRK12480	330	D-lactate dehydrogenase; Provisional	96.3
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.29
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.29
PRK06988	312	putative formyltransferase; Provisional	96.27

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.3e-34  Score=232.73  Aligned_cols=233  Identities=21%  Similarity=0.334  Sum_probs=182.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+||||||+||||+|.+.+|++.|++|.+++.-+... .+..   ..   ..++++++|+.|.+.+.+.|+  ++|+|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~-~~~v---~~---~~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH-KIAL---LK---LQFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC-HHHh---hh---ccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            7899999999999999999999999999999865433 2111   11   117999999999999999998  6999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeeccC----CCCCCccC---CccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPSE----FGNDVDRS---QNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s~----~g~~~~~~---~~~~~~~~~~~~~K~~~e~~  137 (292)
                      +||...               +.++.+|+++|++++ +++|||||    ||......   +.+..|.+||+.||++.|++
T Consensus        74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~i  152 (329)
T COG1087          74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEI  152 (329)
T ss_pred             CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHH
Confidence            999866               789999999999999 99999953    77654422   77778899999999999999


Q ss_pred             HHH----cCccEEEEe-cceeccc--------------cccccccCCCCCCCCCceeecC------CCcceEEeeccchH
Q 039623          138 IEA----EGIQYTYVS-CNCFAGY--------------FLPTLAQIGAPAPPREKVTIFG------DGNAGAVYNKEDDI  192 (292)
Q Consensus       138 ~~~----~~~~~~~ir-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~v~D~  192 (292)
                      ++.    .+++++++| ++..+-.              .+|......  .-+...+.++|      +|...||+|||.|+
T Consensus       153 L~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A--~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DL  230 (329)
T COG1087         153 LRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAA--LGKRDKLFIFGDDYDTKDGTCIRDYIHVDDL  230 (329)
T ss_pred             HHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHH--hcCCceeEEeCCCCCCCCCCeeeeeeehhHH
Confidence            985    579999999 6555421              122222211  12344466666      56778999999999


Q ss_pred             HHHHHHhhcCCcCCCc-eEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHH
Q 039623          193 ATYTINSIDGPRTLNK-TLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE  244 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~-~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~  244 (292)
                      |.+.+.+++.-...+. ..+++|++..+|..|+++.+.++.|.++++...|.+
T Consensus       231 A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR  283 (329)
T COG1087         231 ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRR  283 (329)
T ss_pred             HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCC
Confidence            9999999875332232 344556788999999999999999999988777754

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.1e-33  Score=243.52  Aligned_cols=225  Identities=25%  Similarity=0.351  Sum_probs=181.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+|||||||+|++++++|+++||+|++++|+.     ++.   ..+...+++++.+|++|++++.++++++|+|||++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~-----~~~---~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~   72 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNL-----RKA---SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAS   72 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCh-----HHh---hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence            6899999999999999999999999999999983     322   22234589999999999999999999999999998


Q ss_pred             cCCC----------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEec
Q 039623           82 SRGQ----------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSC  150 (292)
Q Consensus        82 ~~~~----------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~  150 (292)
                      +...          +.++.+++++|++++ +++||+ |+++....       +..++..+|..+|+++++.+++++++||
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~-------~~~~~~~~K~~~e~~l~~~~l~~tilRp  144 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY-------PYIPLMKLKSDIEQKLKKSGIPYTIFRL  144 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc-------CCChHHHHHHHHHHHHHHcCCCeEEEee
Confidence            6432          467899999999999 999998 66654322       1345667999999999999999999999


Q ss_pred             ceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHH
Q 039623          151 NCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWEN  230 (292)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~  230 (292)
                      +.+++..........   ..+.+..+ ..+++.+++||++|+|++++.++.++...+++|+++|++ .+|++|+++.+.+
T Consensus       145 ~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~-~~s~~el~~~~~~  219 (317)
T CHL00194        145 AGFFQGLISQYAIPI---LEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPK-SWNSSEIISLCEQ  219 (317)
T ss_pred             cHHhhhhhhhhhhhh---ccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCC-ccCHHHHHHHHHH
Confidence            887765433221111   22334333 445677899999999999999998776678899998876 8999999999999


Q ss_pred             HhCCCcceeecCHHHHH
Q 039623          231 KIGKTLEKTYVAEEKLL  247 (292)
Q Consensus       231 ~~~~~~~~~~~~~~~~~  247 (292)
                      .+|.+..+..+|...+.
T Consensus       220 ~~g~~~~~~~vp~~~~~  236 (317)
T CHL00194        220 LSGQKAKISRVPLFLLK  236 (317)
T ss_pred             HhCCCCeEEeCCHHHHH
Confidence            99998888888876653

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=100.00  E-value=2.3e-31  Score=225.95  Aligned_cols=242  Identities=18%  Similarity=0.265  Sum_probs=190.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH------cc-CC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI------KQ-VD   75 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~------~~-~d   75 (292)
                      +|+||||||++|++++++|++.|++|++++|+++.     ..      ..+++.+.+|+.|++++.+++      .+ +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~-----~~------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSS-----SA------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc-----cc------CCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence            58999999999999999999999999999998432     21      347788899999999999999      56 99


Q ss_pred             EEEEcCcCCC--chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHc-CccEEEEecc
Q 039623           76 VVISTVSRGQ--IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAE-GIQYTYVSCN  151 (292)
Q Consensus        76 ~vi~~a~~~~--~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~-~~~~~~ir~~  151 (292)
                      .|+|+++...  .....+++++|+++| +++||+ |+.+.....            ..+...++++++. +++|+++||+
T Consensus        70 ~v~~~~~~~~~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~------------~~~~~~~~~l~~~~gi~~tilRp~  136 (285)
T TIGR03649        70 AVYLVAPPIPDLAPPMIKFIDFARSKG-VRRFVLLSASIIEKGG------------PAMGQVHAHLDSLGGVEYTVLRPT  136 (285)
T ss_pred             EEEEeCCCCCChhHHHHHHHHHHHHcC-CCEEEEeeccccCCCC------------chHHHHHHHHHhccCCCEEEEecc
Confidence            9999988643  567889999999999 999998 544432111            1344567788875 9999999999


Q ss_pred             eeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHH
Q 039623          152 CFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENK  231 (292)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~  231 (292)
                      +|++++........   .........+.++..+++++++|+|++++.++.++...++.|++.|++ .+|++|+++.+.+.
T Consensus       137 ~f~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~-~~s~~eia~~l~~~  212 (285)
T TIGR03649       137 WFMENFSEEFHVEA---IRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPE-LLTYDDVAEILSRV  212 (285)
T ss_pred             HHhhhhcccccccc---cccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCc-cCCHHHHHHHHHHH
Confidence            99987632211111   222222334567888999999999999999999876667889999876 99999999999999


Q ss_pred             hCCCcceeecCHHHHHHHHHhCCCChhhH--HhhhhheeeeCC
Q 039623          232 IGKTLEKTYVAEEKLLKDIQDAPIPLNVL--LAITYATFVKGD  272 (292)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  272 (292)
                      +|+++++..+|.+++.+.+...++|.+..  +..++.....|.
T Consensus       213 ~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~  255 (285)
T TIGR03649       213 LGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGA  255 (285)
T ss_pred             hCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCc
Confidence            99999999999999999999999998876  333333344443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2e-31  Score=214.69  Aligned_cols=231  Identities=17%  Similarity=0.178  Sum_probs=186.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCHHHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~--~~d~   76 (292)
                      |++|||||+||||+++++.++++.  .+|+.++.-.-   ..+.+.+..+. +++..++++|+.|.+.+.++++  ++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY---Agn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY---AGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc---cCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            689999999999999999999985  45777776543   33444445444 4699999999999999999998  6999


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCcc-----CCccCCCCcchHHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVDR-----SQNVVEPAKSAYADKI  132 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~~-----~~~~~~~~~~~~~~K~  132 (292)
                      |+|+|+..+               +.++.+||+++++.....+|++    .+||.-...     +.++..|.+||.+||+
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKA  157 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKA  157 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhh
Confidence            999999876               7899999999999972247776    357764332     2788899999999999


Q ss_pred             HHHHHHHH----cCccEEEEec-ceeccccccccccC--CCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          133 KIRRAIEA----EGIQYTYVSC-NCFAGYFLPTLAQI--GAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       133 ~~e~~~~~----~~~~~~~ir~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      ....+++.    +|+++++.|+ +.|+++.++.-+-.  ....+.+.+++++|+|.+.++|+||+|-|+++..++.+.+.
T Consensus       158 asD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~  237 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI  237 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC
Confidence            98888774    7999999985 45555544322111  11237899999999999999999999999999999999876


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                       |++||+.|.. ..+..|+++.+++.+++..+
T Consensus       238 -GE~YNIgg~~-E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         238 -GETYNIGGGN-ERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             -CceEEeCCCc-cchHHHHHHHHHHHhCcccc
Confidence             8999998776 77999999999999998666

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.5e-31  Score=233.09  Aligned_cols=230  Identities=19%  Similarity=0.161  Sum_probs=172.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hh---hhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EI---FKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      ||+|||||||||||++|+++|+++|++|++++|..... ......+ ..   ....++.++.+|+.|.+.+.++++++|+
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~   93 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGY-QHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY   93 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc-hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence            58999999999999999999999999999999864321 1111100 00   0113578999999999999999999999


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccCCCCcchHHHHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVVEPAKSAYADKIKI  134 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~~~~~~~~~~K~~~  134 (292)
                      |||+|+...               +.++.+++++|++.+ +++||+ |   +||......   +.+..|.++|..+|.++
T Consensus        94 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  172 (348)
T PRK15181         94 VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN  172 (348)
T ss_pred             EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            999998643               678999999999998 999987 3   376432211   33444666666699999


Q ss_pred             HHHHHH----cCccEEEEecceecccccccc------cc-CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLPTL------AQ-IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |++++.    .+++++++||+.++|+.....      .. .......++++.+.+++.+.++|+|++|+|++++.++...
T Consensus       173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~  252 (348)
T PRK15181        173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN  252 (348)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence            998764    589999999888888643111      00 0001245667788899999999999999999999877543


Q ss_pred             c--CCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          204 R--TLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       204 ~--~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      .  ..+++||+++. +.+|++|+++.+.+.++
T Consensus       253 ~~~~~~~~yni~~g-~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        253 DLASKNKVYNVAVG-DRTSLNELYYLIRDGLN  283 (348)
T ss_pred             cccCCCCEEEecCC-CcEeHHHHHHHHHHHhC
Confidence            2  24678888754 49999999999999886

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.98  E-value=4.6e-31  Score=217.55  Aligned_cols=226  Identities=31%  Similarity=0.508  Sum_probs=182.1

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCcC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSR   83 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~~   83 (292)
                      |+|+||||.+|+.+++.|++.+++|+++.|++      +.+..+.+...+++++.+|+.|.+++.++|+++|+||++.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~------~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP------SSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS------HHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc------chhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            79999999999999999999999999999984      222335566789999999999999999999999999999995


Q ss_pred             C---CchhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceeccccccc
Q 039623           84 G---QIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPT  160 (292)
Q Consensus        84 ~---~~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~~  160 (292)
                      .   ......++++||+++| +++||+|+++..... .....|..+.+..|..+|+++++.+++|+++|||.|++++...
T Consensus        75 ~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~-~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~  152 (233)
T PF05368_consen   75 SHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDE-SSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPP  152 (233)
T ss_dssp             SCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTT-TTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTT
T ss_pred             chhhhhhhhhhHHHhhhccc-cceEEEEEecccccc-cccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhh
Confidence            4   2889999999999999 999999998876643 2233345667789999999999999999999999999998765


Q ss_pred             cccCCCCCCCCCceeecCCCcceEEee-ccchHHHHHHHhhcCCcCC--CceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          161 LAQIGAPAPPREKVTIFGDGNAGAVYN-KEDDIATYTINSIDGPRTL--NKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~~~~~~l~~~~~~--~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      +............+.+.++++....++ +.+|++++++.++.++...  ++.+++.  ++.+|++|+++.+++.+|++++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~--~~~~t~~eia~~~s~~~G~~v~  230 (233)
T PF05368_consen  153 FAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA--GETLTYNEIAAILSKVLGKKVK  230 (233)
T ss_dssp             THHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG--GGEEEHHHHHHHHHHHHTSEEE
T ss_pred             hcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC--CCCCCHHHHHHHHHHHHCCccE
Confidence            444221112223467788888777775 9999999999999987654  5566665  4589999999999999999987


Q ss_pred             ee
Q 039623          238 KT  239 (292)
Q Consensus       238 ~~  239 (292)
                      +.
T Consensus       231 y~  232 (233)
T PF05368_consen  231 YV  232 (233)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=2.8e-30  Score=227.31  Aligned_cols=233  Identities=25%  Similarity=0.324  Sum_probs=182.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCc-chhhHhhhhcCCcEEEECCCCCHHHHHHHHc----cCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPV-KGKLIEIFKNLGVNVLYGDLQDHESLIKAIK----QVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d   75 (292)
                      +|+|+||||||+||++++++|+++|++|++++|+.+..... ...... ....+++++.+|++|++++.++++    ++|
T Consensus        60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~-~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D  138 (390)
T PLN02657         60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTK-KELPGAEVVFGDVTDADSLRKVLFSEGDPVD  138 (390)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHh-hhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence            36899999999999999999999999999999985321000 000000 113579999999999999999998    599


Q ss_pred             EEEEcCcCCC----------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH--cC
Q 039623           76 VVISTVSRGQ----------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA--EG  142 (292)
Q Consensus        76 ~vi~~a~~~~----------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~--~~  142 (292)
                      +||||++...          +..+.+++++|++.+ +++||+ |+.+..        .|...|..+|...|+.+..  .+
T Consensus       139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~--------~p~~~~~~sK~~~E~~l~~~~~g  209 (390)
T PLN02657        139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ--------KPLLEFQRAKLKFEAELQALDSD  209 (390)
T ss_pred             EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc--------CcchHHHHHHHHHHHHHHhccCC
Confidence            9999987532          467889999999998 999987 554321        1334566699999999886  78


Q ss_pred             ccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceE-EeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccH
Q 039623          143 IQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA-VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSF  221 (292)
Q Consensus       143 ~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~  221 (292)
                      ++++++||+.|++.....+ ...   ..++++.++++++..+ ++||++|+|++++.++.++...+++|++.|+++.+|+
T Consensus       210 l~~tIlRp~~~~~~~~~~~-~~~---~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~  285 (390)
T PLN02657        210 FTYSIVRPTAFFKSLGGQV-EIV---KDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTP  285 (390)
T ss_pred             CCEEEEccHHHhcccHHHH-Hhh---ccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCH
Confidence            9999999999887643222 111   3456667788887654 5799999999999999876666889999887668999


Q ss_pred             HHHHHHHHHHhCCCcceeecCHHHHH
Q 039623          222 NELVTLWENKIGKTLEKTYVAEEKLL  247 (292)
Q Consensus       222 ~e~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
                      +|+++.+.+.+|+++++..+|.+.+.
T Consensus       286 ~Eia~~l~~~lG~~~~~~~vp~~~~~  311 (390)
T PLN02657        286 LEQGEMLFRILGKEPKFFKVPIQIMD  311 (390)
T ss_pred             HHHHHHHHHHhCCCCceEEcCHHHHH
Confidence            99999999999999999988877554

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.97  E-value=1.7e-30  Score=218.47  Aligned_cols=230  Identities=20%  Similarity=0.234  Sum_probs=171.1

Q ss_pred             EEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            5 LIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         5 lItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||||+||+|++|+++|+++|  ++|++++|.....   ..   ..+...+. +++.+|++|.+++.++++++|+|||+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~---~~---~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A   74 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK---FL---KDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTA   74 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc---cc---hhhhcccceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence            699999999999999999999  7999999875422   11   11222333 499999999999999999999999999


Q ss_pred             cCCC--------------chhHHHHHHHHHHhCCcceeec-cCC---CCCC-------ccC--CccCCCCcchHHHHHHH
Q 039623           82 SRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-SEF---GNDV-------DRS--QNVVEPAKSAYADKIKI  134 (292)
Q Consensus        82 ~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s~~---g~~~-------~~~--~~~~~~~~~~~~~K~~~  134 (292)
                      +...              +.++++++++|++.+ ++++|+ |+.   +.+.       .++  ..+..+...|..||..+
T Consensus        75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A  153 (280)
T PF01073_consen   75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA  153 (280)
T ss_pred             ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence            8654              789999999999998 999998 443   2200       010  11112333444499999


Q ss_pred             HHHHHHc---------CccEEEEecceeccccccccccCCCCCC-CCCceeecCCCcceEEeeccchHHHHHHHhhcC--
Q 039623          135 RRAIEAE---------GIQYTYVSCNCFAGYFLPTLAQIGAPAP-PREKVTIFGDGNAGAVYNKEDDIATYTINSIDG--  202 (292)
Q Consensus       135 e~~~~~~---------~~~~~~ir~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~--  202 (292)
                      |+++.+.         .+..++|||+.++|+....+........ .+......+++....+++|++|+|.+++.+++.  
T Consensus       154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~  233 (280)
T PF01073_consen  154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALL  233 (280)
T ss_pred             HHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhc
Confidence            9988752         2788999999999986544433222112 233456677788899999999999999887642  


Q ss_pred             -----CcCCCceEEEcCCCcccc-HHHHHHHHHHHhCCCcce-eecC
Q 039623          203 -----PRTLNKTLYIRPPGNVYS-FNELVTLWENKIGKTLEK-TYVA  242 (292)
Q Consensus       203 -----~~~~~~~~~~~~~~~~~t-~~e~~~~~~~~~~~~~~~-~~~~  242 (292)
                           ....|+.|++...+ +.+ +.|+.+.+.+.+|.+.+. ..+|
T Consensus       234 ~~~~~~~~~G~~y~itd~~-p~~~~~~f~~~~~~~~G~~~~~~~~lp  279 (280)
T PF01073_consen  234 EPGKPERVAGQAYFITDGE-PVPSFWDFMRPLWEALGYPPPKSISLP  279 (280)
T ss_pred             cccccccCCCcEEEEECCC-ccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence                 24568899998665 777 999999999999987765 5554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=2.5e-30  Score=214.78  Aligned_cols=225  Identities=18%  Similarity=0.192  Sum_probs=166.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+|+|||||||||+++++.|+++||+|++.+|++..  +.+.+.+..+.  .++...+.+|+.|++++.+++++||.|||
T Consensus         7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~--~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED--EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch--hhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            689999999999999999999999999999999654  33444556664  34599999999999999999999999999


Q ss_pred             cCcCCC--------------chhHHHHHHHHHHhCCcceeec-cCCCCC------CccC----CccCCC------CcchH
Q 039623           80 TVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-SEFGND------VDRS----QNVVEP------AKSAY  128 (292)
Q Consensus        80 ~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~------~~~~----~~~~~~------~~~~~  128 (292)
                      +|.+..              +.++.+++++|++..+|+|+|+ |+...-      ....    +...++      ....|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            999865              7899999999999988999998 443211      1110    111111      12345


Q ss_pred             H-HHHHHHHHHH----HcCccEEEEecceeccccccccccCC---CCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 A-DKIKIRRAIE----AEGIQYTYVSCNCFAGYFLPTLAQIG---APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~-~K~~~e~~~~----~~~~~~~~ir~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      . +|..+|+...    +.+++.+.+.|+++.|+.+.......   .....++....+.+.  ...|+|++|+|.+.+.++
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~--~~~~VdVrDVA~AHv~a~  242 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF--WLAFVDVRDVALAHVLAL  242 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC--ceeeEeHHHHHHHHHHHH
Confidence            5 8988887664    46799999999999998665422111   111223333333333  345999999999999999


Q ss_pred             cCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          201 DGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      ++++..| .|.+.+ + ..++.|+++.+.+.+.
T Consensus       243 E~~~a~G-Ryic~~-~-~~~~~ei~~~l~~~~P  272 (327)
T KOG1502|consen  243 EKPSAKG-RYICVG-E-VVSIKEIADILRELFP  272 (327)
T ss_pred             cCcccCc-eEEEec-C-cccHHHHHHHHHHhCC
Confidence            9998765 566653 3 5669999999988765

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.97  E-value=1.8e-29  Score=220.17  Aligned_cols=228  Identities=19%  Similarity=0.253  Sum_probs=168.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-CHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-DHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-d~~~~~~~~~~~d~vi   78 (292)
                      ||+|||||||||||++|+++|+++ |++|++++|+.     ++..  ......+++++.+|+. +.+.+.++++++|+||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~-----~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi   73 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT-----DRLG--DLVNHPRMHFFEGDITINKEWIEYHVKKCDVIL   73 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH-----HHHH--HhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence            899999999999999999999987 69999999862     2221  1112346999999998 7778888889999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---Cc-cC------CCCcchHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QN-VV------EPAKSAYA  129 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~-~~------~~~~~~~~  129 (292)
                      |+|+...               +.++.+++++|++.+  +++|+ |   +||......   +. +.      .|.+.|..
T Consensus        74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~  151 (347)
T PRK11908         74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYAC  151 (347)
T ss_pred             ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHH
Confidence            9998532               467899999999876  57776 3   366432110   11 11      23334555


Q ss_pred             HHHHHHHHHHH----cCccEEEEecceecccccccc----------ccCCC-CCCCCCceeecCCCcceEEeeccchHHH
Q 039623          130 DKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTL----------AQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       130 ~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      +|..+|++++.    .+++++++||+.++|......          ....+ ....++++.+.+++++.++|+|++|+++
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~  231 (347)
T PRK11908        152 SKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGID  231 (347)
T ss_pred             HHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHH
Confidence            99999998864    689999999888877643211          00000 1134566677788899999999999999


Q ss_pred             HHHHhhcCCc--CCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          195 YTINSIDGPR--TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      +++.+++++.  ..+++||+++++..+|++|+++.+.+.++..+.
T Consensus       232 a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~  276 (347)
T PRK11908        232 ALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE  276 (347)
T ss_pred             HHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccc
Confidence            9999998753  346789998654579999999999999886443

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.97  E-value=2.5e-29  Score=224.44  Aligned_cols=239  Identities=18%  Similarity=0.196  Sum_probs=172.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCC-----cc-------hhhHh---hhhcCCcEEEECCCCCHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDP-----VK-------GKLIE---IFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~-------~~~~~---~~~~~~v~~v~~D~~d~~   65 (292)
                      ||+|||||||||||++|++.|+++|++|++++|.......     +.       .+.++   .....+++++.+|++|.+
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~  126 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE  126 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence            5789999999999999999999999999998753211100     00       01111   111246899999999999


Q ss_pred             HHHHHHc--cCCEEEEcCcCCC------------------chhHHHHHHHHHHhCCcc-eeec----cCCCCCCc---c-
Q 039623           66 SLIKAIK--QVDVVISTVSRGQ------------------IPEQAKIIAAVKEAGNVK-RFLP----SEFGNDVD---R-  116 (292)
Q Consensus        66 ~~~~~~~--~~d~vi~~a~~~~------------------~~~~~~l~~a~~~~~~~~-~~i~----s~~g~~~~---~-  116 (292)
                      .+.++++  ++|+|||+|+...                  +.++.+++++|++.+ ++ +||+    ++||....   + 
T Consensus       127 ~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~~~E~  205 (442)
T PLN02572        127 FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNIDIEEG  205 (442)
T ss_pred             HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCCCccc
Confidence            9999998  5899999996522                  568999999999998 75 7876    24774321   0 


Q ss_pred             ---------CC---ccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccccc------ccc-----------
Q 039623          117 ---------SQ---NVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT------LAQ-----------  163 (292)
Q Consensus       117 ---------~~---~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~------~~~-----------  163 (292)
                               .+   .+..|.++|..+|.+.|.+++.    .+++++++||+.++|.....      +..           
T Consensus       206 ~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~  285 (442)
T PLN02572        206 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTA  285 (442)
T ss_pred             ccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhH
Confidence                     01   1344556677799999988764    58999999988888864321      000           


Q ss_pred             ---CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCC--ceEEEcCCCccccHHHHHHHHHHH---hCCC
Q 039623          164 ---IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLN--KTLYIRPPGNVYSFNELVTLWENK---IGKT  235 (292)
Q Consensus       164 ---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~--~~~~~~~~~~~~t~~e~~~~~~~~---~~~~  235 (292)
                         .......++++.++++|++.++|+|++|+|++++.+++++...+  .+||+. ++ .+|++|+++.+.+.   +|.+
T Consensus       286 i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nig-s~-~~si~el~~~i~~~~~~~g~~  363 (442)
T PLN02572        286 LNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQF-TE-QFSVNELAKLVTKAGEKLGLD  363 (442)
T ss_pred             HHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeC-CC-ceeHHHHHHHHHHHHHhhCCC
Confidence               00011345567788999999999999999999999998653333  467775 44 79999999999998   8866


Q ss_pred             cceeecC
Q 039623          236 LEKTYVA  242 (292)
Q Consensus       236 ~~~~~~~  242 (292)
                      ..+...|
T Consensus       364 ~~~~~~p  370 (442)
T PLN02572        364 VEVISVP  370 (442)
T ss_pred             CCeeeCC
Confidence            5554443

>PLN02427 UDP-apiose/xylose synthase

Probab=99.97  E-value=1.3e-29  Score=223.98  Aligned_cols=226  Identities=18%  Similarity=0.217  Sum_probs=167.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |||||||||||||++|++.|+++ |++|++++|+.     ++...+...    ...+++++.+|+.|.+.+.++++++|+
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~-----~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~   89 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYN-----DKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL   89 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCc-----hhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence            68999999999999999999998 59999999873     332222111    124699999999999999999999999


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc---CCccC-------------
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR---SQNVV-------------  121 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~---~~~~~-------------  121 (292)
                      |||+|+...               +.++.+++++|++.+  ++||+ |   +||.....   .+.+.             
T Consensus        90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~  167 (386)
T PLN02427         90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDE  167 (386)
T ss_pred             EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccc
Confidence            999998532               556889999998876  67776 3   36643110   01110             


Q ss_pred             ---------CCCcchHHHHHHHHHHHHH----cCccEEEEecceecccccccc-------------ccC-CCCCCCCCce
Q 039623          122 ---------EPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTL-------------AQI-GAPAPPREKV  174 (292)
Q Consensus       122 ---------~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~-------------~~~-~~~~~~~~~~  174 (292)
                               .|.+.|..+|..+|+++..    .+++++++||+.++|......             ... ......++++
T Consensus       168 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  247 (386)
T PLN02427        168 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPL  247 (386)
T ss_pred             cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCe
Confidence                     1223566699999999874    589999999999988743110             000 0011356677


Q ss_pred             eecCCCcceEEeeccchHHHHHHHhhcCCc-CCCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          175 TIFGDGNAGAVYNKEDDIATYTINSIDGPR-TLNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       175 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                      .+.+++++.++|+|++|+|++++.+++++. ..+++||++++++.+|++|+++.+.+.+|.
T Consensus       248 ~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        248 KLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             EEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            788888899999999999999999998753 346789887553489999999999999874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.97  E-value=1.3e-28  Score=215.92  Aligned_cols=227  Identities=18%  Similarity=0.170  Sum_probs=171.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|||||||||||+++++.|.++||+|++++|.....    .   .. .....+++.+|++|.+.+..++.++|+|||+|
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~----~---~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   93 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH----M---SE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA   93 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc----c---cc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence            6899999999999999999999999999999863211    0   00 01236788999999999988899999999999


Q ss_pred             cCCC----------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc-----C--C--ccCCCCcchHHHHH
Q 039623           82 SRGQ----------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR-----S--Q--NVVEPAKSAYADKI  132 (292)
Q Consensus        82 ~~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~-----~--~--~~~~~~~~~~~~K~  132 (292)
                      +...                +.++.+++++|++.+ +++||+ |   .||.....     .  +  .+..|.+.|..+|.
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~  172 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL  172 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHH
Confidence            7531                557899999999998 999987 3   36643210     0  1  14456566666999


Q ss_pred             HHHHHHHH----cCccEEEEecceeccccccc----------cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          133 KIRRAIEA----EGIQYTYVSCNCFAGYFLPT----------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       133 ~~e~~~~~----~~~~~~~ir~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      ..|+++..    .+++++++||+.++|+....          +.....  ....++.+++++++.++|+|++|+++++..
T Consensus       173 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~  250 (370)
T PLN02695        173 ATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAL--TSTDEFEMWGDGKQTRSFTFIDECVEGVLR  250 (370)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHH--cCCCCeEEeCCCCeEEeEEeHHHHHHHHHH
Confidence            99998754    68999999998888864211          111110  124567888999999999999999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ++++.  .+++||+++.. .+|++|+++.+.+..|.+.++...|
T Consensus       251 ~~~~~--~~~~~nv~~~~-~~s~~el~~~i~~~~g~~~~i~~~~  291 (370)
T PLN02695        251 LTKSD--FREPVNIGSDE-MVSMNEMAEIALSFENKKLPIKHIP  291 (370)
T ss_pred             HHhcc--CCCceEecCCC-ceeHHHHHHHHHHHhCCCCCceecC
Confidence            88764  35788887554 8999999999999988766655443

>PLN00016 RNA-binding protein; Provisional

Probab=99.96  E-value=7.8e-29  Score=218.23  Aligned_cols=232  Identities=19%  Similarity=0.254  Sum_probs=171.4

Q ss_pred             CceEEEE----ccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCc---chhhHhhhhcCCcEEEECCCCCHHHHHHHH--
Q 039623            1 MAATLII----GGTGYIGKKILEASVKAGHPTFALVRESTASDPV---KGKLIEIFKNLGVNVLYGDLQDHESLIKAI--   71 (292)
Q Consensus         1 m~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~--   71 (292)
                      ||+||||    |||||||++|++.|+++||+|++++|+......-   ....+..+...+++++.+|+.|   +.+++  
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~  128 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG  128 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc
Confidence            3689999    9999999999999999999999999985421000   0011123334579999999977   33444  


Q ss_pred             ccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec-cC---CCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEE
Q 039623           72 KQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTY  147 (292)
Q Consensus        72 ~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~  147 (292)
                      .++|+|||+++.. ...+++++++|++.| +++||+ |+   ||...........+..+. .+|..+|+++++.++++++
T Consensus       129 ~~~d~Vi~~~~~~-~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~-~sK~~~E~~l~~~~l~~~i  205 (378)
T PLN00016        129 AGFDVVYDNNGKD-LDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKPK-AGHLEVEAYLQKLGVNWTS  205 (378)
T ss_pred             CCccEEEeCCCCC-HHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCCc-chHHHHHHHHHHcCCCeEE
Confidence            4799999998754 678999999999998 999997 43   443221100011111122 2899999999999999999


Q ss_pred             Eecceeccccccc-----cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHH
Q 039623          148 VSCNCFAGYFLPT-----LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFN  222 (292)
Q Consensus       148 ir~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~  222 (292)
                      +||+.++|.....     +...   ...++++.+.+++.+.++++|++|+|++++.+++++...+++|+++++. .+|+.
T Consensus       206 lRp~~vyG~~~~~~~~~~~~~~---~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~-~~s~~  281 (378)
T PLN00016        206 FRPQYIYGPGNNKDCEEWFFDR---LVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDR-AVTFD  281 (378)
T ss_pred             EeceeEECCCCCCchHHHHHHH---HHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCC-ccCHH
Confidence            9999998864221     1111   1345567777888999999999999999999999876567889998765 89999


Q ss_pred             HHHHHHHHHhCCCcceeecC
Q 039623          223 ELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       223 e~~~~~~~~~~~~~~~~~~~  242 (292)
                      |+++.+.+.+|.+..+...+
T Consensus       282 el~~~i~~~~g~~~~i~~~~  301 (378)
T PLN00016        282 GMAKACAKAAGFPEEIVHYD  301 (378)
T ss_pred             HHHHHHHHHhCCCCceeecC
Confidence            99999999999876654433

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.96  E-value=1.8e-28  Score=214.51  Aligned_cols=229  Identities=17%  Similarity=0.184  Sum_probs=167.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      ||+|||||||||||+++++.|+++|++++++.++...  ......+... ...+++++.+|++|.+++.++++  ++|+|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTY--AGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcc--ccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            8999999999999999999999999886655443211  1111111111 12357889999999999999998  49999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHh---------CCcceeec-c---CCCCCCc-----cCCccCCCC
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEA---------GNVKRFLP-S---EFGNDVD-----RSQNVVEPA  124 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~---------~~~~~~i~-s---~~g~~~~-----~~~~~~~~~  124 (292)
                      ||+||...               +.++.+++++|.+.         + ++++|+ |   .||....     .++.+..|.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVYGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhcCCCCCCCCCcCCCCCCCCC
Confidence            99998643               67899999999863         3 678876 3   3663211     113344566


Q ss_pred             cchHHHHHHHHHHHHH----cCccEEEEecceecccccc-c-cccCC-CCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLP-T-LAQIG-APAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      +.|..+|..+|.+++.    .+++++++||+.++|+... . +.... .....++++.+++++++.++|+|++|+|++++
T Consensus       158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~  237 (355)
T PRK10217        158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY  237 (355)
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHH
Confidence            6666699999988863    5899999999998886531 1 10000 01134566778899999999999999999999


Q ss_pred             HhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                      .+++... .+++||++++. .+|++|+++.+.+.++.
T Consensus       238 ~~~~~~~-~~~~yni~~~~-~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        238 CVATTGK-VGETYNIGGHN-ERKNLDVVETICELLEE  272 (355)
T ss_pred             HHHhcCC-CCCeEEeCCCC-cccHHHHHHHHHHHhcc
Confidence            9998753 46788887655 89999999999998875

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=1.8e-28  Score=218.15  Aligned_cols=228  Identities=15%  Similarity=0.283  Sum_probs=165.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||||||||||||++|+++|+++|++|++++|..... .++.  .......+++++.+|+.+.     .+.++|+|||+|
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~-~~~~--~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA  192 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR-KENL--VHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA  192 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc-HhHh--hhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence            6899999999999999999999999999999863211 1111  1111234688999998764     346899999999


Q ss_pred             cCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---C-----ccCCCCcchHHHHHHH
Q 039623           82 SRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---Q-----NVVEPAKSAYADKIKI  134 (292)
Q Consensus        82 ~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~-----~~~~~~~~~~~~K~~~  134 (292)
                      +...               +.++.+++++|++++ + ++|+ |   +||......   +     .+..|.+.|..+|..+
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a  270 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  270 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence            8532               667999999999998 6 5665 3   366432110   1     2334445566699999


Q ss_pred             HHHHHH----cCccEEEEecceecccccc----ccc-cCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLP----TLA-QIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      |++++.    .+++++++||+.++|....    ... ........++++.+++++++.++|+|++|+++++..++++.. 
T Consensus       271 E~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~-  349 (436)
T PLN02166        271 ETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH-  349 (436)
T ss_pred             HHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC-
Confidence            998864    5899999998888876421    110 000011456778888999999999999999999999997643 


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                       +++||+++++ .+|++|+++.+.+.+|.+..+...+
T Consensus       350 -~giyNIgs~~-~~Si~ela~~I~~~~g~~~~i~~~p  384 (436)
T PLN02166        350 -VGPFNLGNPG-EFTMLELAEVVKETIDSSATIEFKP  384 (436)
T ss_pred             -CceEEeCCCC-cEeHHHHHHHHHHHhCCCCCeeeCC
Confidence             4689987655 8999999999999998766554433

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.96  E-value=6.9e-28  Score=214.71  Aligned_cols=227  Identities=15%  Similarity=0.281  Sum_probs=164.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||||||||||||++|++.|+++|++|++++|..... .+.  ....+...+++++.+|+.+.     ++.++|+|||+|
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~-~~~--~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlA  191 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGR-KEN--VMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLA  191 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccc-hhh--hhhhccCCceEEEECCccCh-----hhcCCCEEEEee
Confidence            6899999999999999999999999999998763221 111  11122345789999998775     345799999999


Q ss_pred             cCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC--C------ccCCCCcchHHHHHHH
Q 039623           82 SRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS--Q------NVVEPAKSAYADKIKI  134 (292)
Q Consensus        82 ~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~--~------~~~~~~~~~~~~K~~~  134 (292)
                      +...               +.++.+++++|++.+ + ++|+ |   +||......  +      .+..+.+.|..+|..+
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~a  269 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTA  269 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHH
Confidence            8532               567899999999998 6 6665 3   365432110  1      1222334455599999


Q ss_pred             HHHHHH----cCccEEEEecceecccccc----cccc-CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLP----TLAQ-IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      |+++..    .+++++++||+.++|....    .... .......++++.+++++++.++|+|++|+|++++.++++.. 
T Consensus       270 E~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~-  348 (442)
T PLN02206        270 ETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH-  348 (442)
T ss_pred             HHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC-
Confidence            998864    5899999998888776421    1110 00011456677888999999999999999999999997642 


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeec
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYV  241 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~  241 (292)
                       ++.||+++++ .+|++|+++.+.+.++.+..+...
T Consensus       349 -~g~yNIgs~~-~~sl~Elae~i~~~~g~~~~i~~~  382 (442)
T PLN02206        349 -VGPFNLGNPG-EFTMLELAKVVQETIDPNAKIEFR  382 (442)
T ss_pred             -CceEEEcCCC-ceeHHHHHHHHHHHhCCCCceeeC
Confidence             4589987655 899999999999999866555443

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.96  E-value=5.8e-28  Score=226.25  Aligned_cols=226  Identities=22%  Similarity=0.256  Sum_probs=166.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHH-HHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHES-LIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~-~~~~~~~~d~vi   78 (292)
                      ||+|||||||||||++|+++|+++ ||+|++++|.+..     ..  ......+++++.+|++|.+. +.++++++|+||
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~-----~~--~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi  387 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA-----IS--RFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVL  387 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh-----hh--hhcCCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence            579999999999999999999986 7999999997421     11  11123478999999998655 567888999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCcc------C-CCCcchHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNV------V-EPAKSAYA  129 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~------~-~~~~~~~~  129 (292)
                      |+|+...               +.++.+++++|++++  ++||+ |   +||....   .++.+      . .|.+.|..
T Consensus       388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~  465 (660)
T PRK08125        388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSV  465 (660)
T ss_pred             ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHH
Confidence            9998543               567899999999987  67776 3   3664221   10211      1 12234556


Q ss_pred             HHHHHHHHHHH----cCccEEEEecceeccccccccc-----------cCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          130 DKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLA-----------QIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       130 ~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      +|..+|+++..    .+++++++||+.++|.......           ........++++.+.+++++.++|+|++|+|+
T Consensus       466 sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~  545 (660)
T PRK08125        466 SKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIE  545 (660)
T ss_pred             HHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHH
Confidence            99999999864    5899999999988876432110           00011134567777888999999999999999


Q ss_pred             HHHHhhcCCc--CCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          195 YTINSIDGPR--TLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      +++.+++++.  ..+++||++++.+.+|++|+++.+.+.+|..
T Consensus       546 a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        546 ALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             HHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            9999998753  2366888875534799999999999998854

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=5.9e-28  Score=210.25  Aligned_cols=231  Identities=19%  Similarity=0.189  Sum_probs=164.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh----hhcCCcEEEECCCCCHHHHHHHHc--cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI----FKNLGVNVLYGDLQDHESLIKAIK--QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~v~~v~~D~~d~~~~~~~~~--~~d   75 (292)
                      |+|||||||||||++|+++|++.|++|++++|++.....+..+.+..    ....+++++.+|++|.+.+.++++  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999853211111211110    012468999999999999999998  479


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhCCcc---eeec-c---CCCCCCc---cCCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAGNVK---RFLP-S---EFGNDVD---RSQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~---~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~  130 (292)
                      +|||+|+...               +.++.+++++|++.+ ++   +||+ |   .||....   .++.+..|.++|..+
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s  159 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAA  159 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHH
Confidence            9999999643               347899999999987 53   6776 3   3774321   114455566677779


Q ss_pred             HHHHHHHHHH----cCccEEEEec-ceeccccccccccC----CC-CCCCCC-ceeecCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA----EGIQYTYVSC-NCFAGYFLPTLAQI----GA-PAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~-~~~~~~~~~~~~~~----~~-~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|.+++.    .++++++.|+ +.+++.....+...    .+ ....++ ....++++++.++|+|++|+|++++.+
T Consensus       160 K~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~  239 (343)
T TIGR01472       160 KLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLM  239 (343)
T ss_pred             HHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHH
Confidence            9999998864    4788777774 44433211111100    00 001232 234568899999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      ++++.  ++.||+++ ++.+|++|+++.+.+.+|.+.
T Consensus       240 ~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~~  273 (343)
T TIGR01472       240 LQQDK--PDDYVIAT-GETHSVREFVEVSFEYIGKTL  273 (343)
T ss_pred             HhcCC--CccEEecC-CCceeHHHHHHHHHHHcCCCc
Confidence            98653  35788875 459999999999999998654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=1.6e-27  Score=224.25  Aligned_cols=231  Identities=16%  Similarity=0.164  Sum_probs=172.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHH--ccCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAI--KQVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~--~~~d   75 (292)
                      +|+|||||||||||++|++.|+++  +++|++++|....   ++...+.. ....+++++.+|+.|.+.+..++  .++|
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~---~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D   82 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC---SNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGID   82 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc---chhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence            479999999999999999999998  5889999875211   11111111 12357899999999998887776  4799


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc------CCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR------SQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~------~~~~~~~~~~~~~~  130 (292)
                      +|||+|+...               +.++.+++++|++.+.+++||+ |   +||.....      ++.+..|.++|..+
T Consensus        83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s  162 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT  162 (668)
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence            9999999753               4578999999999865789987 3   36643221      13344566677779


Q ss_pred             HHHHHHHHHH----cCccEEEEecceecccccc--cccc-CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFLP--TLAQ-IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..+|++++.    .+++++++||+.++|....  .+.. .......++++.+.+++++.++|+|++|+|+++..++++.
T Consensus       163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~  242 (668)
T PLN02260        163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG  242 (668)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence            9999998864    5899999998888876421  1110 0001134567788899999999999999999999998764


Q ss_pred             cCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          204 RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       204 ~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      . .+++||+.+++ .+|+.|+++.+.+.+|.+.
T Consensus       243 ~-~~~vyni~~~~-~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        243 E-VGHVYNIGTKK-ERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             C-CCCEEEECCCC-eeEHHHHHHHHHHHhCCCC
Confidence            3 46789987665 8999999999999998653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.96  E-value=2.2e-27  Score=206.21  Aligned_cols=223  Identities=18%  Similarity=0.178  Sum_probs=161.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ||+|+|||||||||++++++|+++|++|++++|+....   +...+..+.  ..+++++.+|++|.+++.++++++|+||
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDP---KNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhh---hHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            47899999999999999999999999999999974311   111112221  1358899999999999999999999999


Q ss_pred             EcCcCCC----------chhHHHHHHHHHHhCCcceeec-cC----CCCCCcc----C-Cc-------cCCCCcchHHHH
Q 039623           79 STVSRGQ----------IPEQAKIIAAVKEAGNVKRFLP-SE----FGNDVDR----S-QN-------VVEPAKSAYADK  131 (292)
Q Consensus        79 ~~a~~~~----------~~~~~~l~~a~~~~~~~~~~i~-s~----~g~~~~~----~-~~-------~~~~~~~~~~~K  131 (292)
                      |+|+...          +.++.+++++|++.+ ++++|+ |+    ||.....    . +.       +..|.+.|..+|
T Consensus        87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK  165 (342)
T PLN02214         87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGK  165 (342)
T ss_pred             EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHH
Confidence            9998754          678999999999998 888887 33    4432110    0 11       112334555599


Q ss_pred             HHHHHHHHH----cCccEEEEecceecccccccccc-C--C-CCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          132 IKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQ-I--G-APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       132 ~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      ..+|+++..    .+++++++||+.++|........ .  . .....+.. ...  +++.++|||++|+|++++.+++++
T Consensus       166 ~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~i~V~Dva~a~~~al~~~  242 (342)
T PLN02214        166 MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSA-KTY--ANLTQAYVDVRDVALAHVLVYEAP  242 (342)
T ss_pred             HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc-ccC--CCCCcCeeEHHHHHHHHHHHHhCc
Confidence            999998864    58999999999998875321100 0  0 00011222 222  345789999999999999999876


Q ss_pred             cCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          204 RTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       204 ~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      .. ++.|++++ + ..+++|+++.+.+.++
T Consensus       243 ~~-~g~yn~~~-~-~~~~~el~~~i~~~~~  269 (342)
T PLN02214        243 SA-SGRYLLAE-S-ARHRGEVVEILAKLFP  269 (342)
T ss_pred             cc-CCcEEEec-C-CCCHHHHHHHHHHHCC
Confidence            54 45788864 4 7899999999999885

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.96  E-value=1.5e-26  Score=201.17  Aligned_cols=238  Identities=18%  Similarity=0.256  Sum_probs=166.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||||||||||+++++.|+++|++|++++|..... ......+..+...++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCch-HhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            6899999999999999999999999999998753211 111111222223467889999999999999887  6999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc---cCCccC-CCCcchHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD---RSQNVV-EPAKSAYADKIKIRR  136 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~---~~~~~~-~~~~~~~~~K~~~e~  136 (292)
                      +|+...               +.++.+++++|++.+ ++++|+ |+   ||....   .++.+. .|...|..+|..+|+
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~  158 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence            998543               457889999999998 888887 33   443211   112332 355566669999999


Q ss_pred             HHHH-----cCccEEEEecceecccccc------------ccccCCCCCC--CCCceeecC------CCcceEEeeccch
Q 039623          137 AIEA-----EGIQYTYVSCNCFAGYFLP------------TLAQIGAPAP--PREKVTIFG------DGNAGAVYNKEDD  191 (292)
Q Consensus       137 ~~~~-----~~~~~~~ir~~~~~~~~~~------------~~~~~~~~~~--~~~~~~~~~------~~~~~~~~i~v~D  191 (292)
                      ++++     .+++++++|++.+++..-.            .+........  ....+.+.+      ++.+.++|+|++|
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D  238 (338)
T PRK10675        159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD  238 (338)
T ss_pred             HHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHH
Confidence            8874     2678999997666653200            0000000001  112233333      5778999999999


Q ss_pred             HHHHHHHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          192 IATYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       192 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +|++++.+++..  ...+++||++++. .+|++|+++.+.+.+|.+.++...|
T Consensus       239 ~a~~~~~~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  290 (338)
T PRK10675        239 LADGHVAAMEKLANKPGVHIYNLGAGV-GSSVLDVVNAFSKACGKPVNYHFAP  290 (338)
T ss_pred             HHHHHHHHHHhhhccCCCceEEecCCC-ceeHHHHHHHHHHHhCCCCCeeeCC
Confidence            999999999752  2335688887555 8999999999999999876665544

>PLN02686 cinnamoyl-CoA reductase

Probab=99.95  E-value=3.2e-27  Score=206.88  Aligned_cols=232  Identities=16%  Similarity=0.144  Sum_probs=164.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--------cCCcEEEECCCCCHHHHHHHHc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--------NLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      ||+||||||+||||+++++.|+++|++|++++|+     .++.+.+..+.        ..++.++.+|++|.+++.++++
T Consensus        53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~-----~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDT-----QEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999887     33332222221        1358899999999999999999


Q ss_pred             cCCEEEEcCcCCC---------------chhHHHHHHHHHHh-CCcceeec-cC-----CCCC--Cc--c-C-C------
Q 039623           73 QVDVVISTVSRGQ---------------IPEQAKIIAAVKEA-GNVKRFLP-SE-----FGND--VD--R-S-Q------  118 (292)
Q Consensus        73 ~~d~vi~~a~~~~---------------~~~~~~l~~a~~~~-~~~~~~i~-s~-----~g~~--~~--~-~-~------  118 (292)
                      ++|.|||+++...               +.++.+++++|++. + ++++|+ |+     ||..  ..  . . +      
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~  206 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE  206 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence            9999999987532               56789999999986 6 999987 33     3321  10  0 0 1      


Q ss_pred             -ccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHH
Q 039623          119 -NVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       119 -~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                       .+..|.++|..+|..+|+++..    .+++++++||+.++|+...............+...+++++  .++|+|++|+|
T Consensus       207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g--~~~~v~V~Dva  284 (367)
T PLN02686        207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADG--LLATADVERLA  284 (367)
T ss_pred             hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCC--CcCeEEHHHHH
Confidence             1122334555699999998853    5899999999999887532110000000112234455554  35799999999


Q ss_pred             HHHHHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          194 TYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       194 ~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ++++.+++..  ...+++| +++ ++.++++|+++.+.+.+|.+......+
T Consensus       285 ~A~~~al~~~~~~~~~~~y-i~~-g~~~s~~e~~~~i~~~~g~~~~~~~~~  333 (367)
T PLN02686        285 EAHVCVYEAMGNKTAFGRY-ICF-DHVVSREDEAEELARQIGLPINKIAGN  333 (367)
T ss_pred             HHHHHHHhccCCCCCCCcE-EEe-CCCccHHHHHHHHHHHcCCCCCcCCCc
Confidence            9999999852  2335566 654 458999999999999999765544433

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.95  E-value=2e-27  Score=196.17  Aligned_cols=202  Identities=27%  Similarity=0.397  Sum_probs=158.1

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEEEcC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVISTV   81 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi~~a   81 (292)
                      |||||||||+|++++++|+++|+.|+.+.|++..     .....  ...+++++.+|+.|.+.+.+++++  +|+|||+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~-----~~~~~--~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNS-----ESFEE--KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTG-----GHHHH--HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccc-----ccccc--ccceEEEEEeeccccccccccccccCceEEEEee
Confidence            7999999999999999999999999999998432     11111  122899999999999999999985  59999999


Q ss_pred             cCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCccC---CccCCCCcchHHHHHHHHHHHH
Q 039623           82 SRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVDRS---QNVVEPAKSAYADKIKIRRAIE  139 (292)
Q Consensus        82 ~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~~~---~~~~~~~~~~~~~K~~~e~~~~  139 (292)
                      +...               +..+.+++++|++.+ ++++++    +.|+......   +.+..|.++|..+|...|++++
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~  152 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLR  152 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9862               789999999999999 888887    3466552211   4444566666679999999987


Q ss_pred             H----cCccEEEEecceecccc----c-cccccCC-CCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCce
Q 039623          140 A----EGIQYTYVSCNCFAGYF----L-PTLAQIG-APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKT  209 (292)
Q Consensus       140 ~----~~~~~~~ir~~~~~~~~----~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  209 (292)
                      .    .+++++++||+.++|..    . ..+.... .....++++.+++++++.++++|++|+|++++.+++++...+++
T Consensus       153 ~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  232 (236)
T PF01370_consen  153 DYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGI  232 (236)
T ss_dssp             HHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEE
T ss_pred             ccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCE
Confidence            5    48999999999988876    1 1110000 01145666889999999999999999999999999998767889


Q ss_pred             EEEc
Q 039623          210 LYIR  213 (292)
Q Consensus       210 ~~~~  213 (292)
                      ||++
T Consensus       233 yNig  236 (236)
T PF01370_consen  233 YNIG  236 (236)
T ss_dssp             EEES
T ss_pred             EEeC
Confidence            9873

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.95  E-value=1.5e-26  Score=202.30  Aligned_cols=229  Identities=16%  Similarity=0.172  Sum_probs=165.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      |||||||||||||+++++.|+++|++ |++++|....   ...+.+..+ ...+++++.+|++|.+++.++++  ++|+|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA---GNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAV   77 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCcc---chHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence            68999999999999999999999976 5555553211   111111111 12457889999999999999997  48999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHh--------CCcceeec-c---CCCCCC-------------ccC
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEA--------GNVKRFLP-S---EFGNDV-------------DRS  117 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~--------~~~~~~i~-s---~~g~~~-------------~~~  117 (292)
                      ||+|+...               +.++.+++++|++.        +.++++|+ |   .||...             ..+
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence            99998642               67899999999874        12567876 3   366421             011


Q ss_pred             CccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceecccccc-c-cccCC-CCCCCCCceeecCCCcceEEeeccc
Q 039623          118 QNVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLP-T-LAQIG-APAPPREKVTIFGDGNAGAVYNKED  190 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~  190 (292)
                      +.+..|.+.|..+|..+|++++.    .+++++++|++.++|+... . +.... .....++.+.+++++++.++++|++
T Consensus       158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  237 (352)
T PRK10084        158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE  237 (352)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHH
Confidence            34455666666699999998864    5899999998888776421 1 11000 0113455677888899999999999


Q ss_pred             hHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          191 DIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       191 D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      |+|+++..+++++. .++.||+++++ ..|++|+++.+++.++..
T Consensus       238 D~a~a~~~~l~~~~-~~~~yni~~~~-~~s~~~~~~~i~~~~~~~  280 (352)
T PRK10084        238 DHARALYKVVTEGK-AGETYNIGGHN-EKKNLDVVLTICDLLDEI  280 (352)
T ss_pred             HHHHHHHHHHhcCC-CCceEEeCCCC-cCcHHHHHHHHHHHhccc
Confidence            99999999998643 46789987555 899999999999998853

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.95  E-value=5.3e-27  Score=200.23  Aligned_cols=207  Identities=18%  Similarity=0.219  Sum_probs=155.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      ||||||||+||||++|++.|+++| +|++++|...                   .+.+|++|.+.+.++++  ++|+|||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih   60 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKIRPDVIVN   60 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhcCCCEEEE
Confidence            689999999999999999999999 7999988621                   24689999999999998  5899999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc---cCCccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD---RSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~---~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      ||+...               +.++.+++++|++.+ + ++|+ |+   ||....   .++.+..|.++|..+|..+|++
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~  138 (299)
T PRK09987         61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKA  138 (299)
T ss_pred             CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence            998754               557899999999998 6 4665 33   554321   1145556767777799999999


Q ss_pred             HHHcCccEEEEecceeccccccccccCCC-CCCCCCceeecCC--CcceEEeeccchHHHHHHHhhcCCcCCCceEEEcC
Q 039623          138 IEAEGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPREKVTIFGD--GNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRP  214 (292)
Q Consensus       138 ~~~~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~  214 (292)
                      +.....+++++|+++++|+....+....+ ....++++.++++  +.+.+.+.+.+|++.++..++..+.. +++||+++
T Consensus       139 ~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~  217 (299)
T PRK09987        139 LQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVA  217 (299)
T ss_pred             HHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeC
Confidence            99888889999999988764322211111 1134566777776  55555666677788888877765432 46899887


Q ss_pred             CCccccHHHHHHHHHHHh
Q 039623          215 PGNVYSFNELVTLWENKI  232 (292)
Q Consensus       215 ~~~~~t~~e~~~~~~~~~  232 (292)
                      ++ .+|+.|+++.+.+..
T Consensus       218 ~~-~~s~~e~~~~i~~~~  234 (299)
T PRK09987        218 SG-TTTWHDYAALVFEEA  234 (299)
T ss_pred             CC-CccHHHHHHHHHHHH
Confidence            66 899999999997754

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.95  E-value=9.1e-27  Score=202.43  Aligned_cols=228  Identities=18%  Similarity=0.199  Sum_probs=157.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc-CCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN-LGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+||||||+||||++|++.|+++|++|++++|+....  .+...+..+.. .+++++.+|++|.+++.++++++|+|||
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQ--KKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCH--HHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            36899999999999999999999999999999884321  11111111111 2588999999999999999999999999


Q ss_pred             cCcCCC--------------chhHHHHHHHHHHhCCcceeec-cC---CCCCC----c---cCC---------ccCCCCc
Q 039623           80 TVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDV----D---RSQ---------NVVEPAK  125 (292)
Q Consensus        80 ~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~----~---~~~---------~~~~~~~  125 (292)
                      +|+...              +.++.+++++|.+.+.++++|+ |+   ||...    .   .+.         .+..|.+
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  166 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW  166 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence            998532              5678899999988633788887 33   55321    0   000         1223455


Q ss_pred             chHHHHHHHHHHHHH----cCccEEEEecceeccccccccccCC----CCCCCCCceeecC-CC----cceEEeeccchH
Q 039623          126 SAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIG----APAPPREKVTIFG-DG----NAGAVYNKEDDI  192 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~----~~~~~~i~v~D~  192 (292)
                      +|..+|..+|+++..    .+++++++||+.++|+.........    .....++.+.+.+ .+    +..++|+|++|+
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~  246 (338)
T PLN00198        167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDV  246 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHH
Confidence            566699999988764    5899999999988887432110000    0012233333333 22    224799999999


Q ss_pred             HHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          193 ATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      |++++.+++.+.. ++.| +++ +...|++|+++.+.+.++
T Consensus       247 a~a~~~~~~~~~~-~~~~-~~~-~~~~s~~el~~~i~~~~~  284 (338)
T PLN00198        247 CRAHIFLAEKESA-SGRY-ICC-AANTSVPELAKFLIKRYP  284 (338)
T ss_pred             HHHHHHHhhCcCc-CCcE-EEe-cCCCCHHHHHHHHHHHCC
Confidence            9999999987543 3456 433 347899999999998875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=7.4e-27  Score=201.68  Aligned_cols=223  Identities=20%  Similarity=0.222  Sum_probs=157.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|||||||||||++++++|+++|++|+++.|+....  ++...+...  ...+++++.+|++|.+.+.++++++|+|||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR--KKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch--HHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            6899999999999999999999999999999984321  111111111  124689999999999999999999999999


Q ss_pred             cCcCCC--------------chhHHHHHHHHHHhCCcceeec-cCC-----CCCC---c---cCCccC------CCCcch
Q 039623           80 TVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-SEF-----GNDV---D---RSQNVV------EPAKSA  127 (292)
Q Consensus        80 ~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s~~-----g~~~---~---~~~~~~------~~~~~~  127 (292)
                      +|+...              +.++.+++++|++...++++|+ |+.     +...   .   .++...      .+.+.|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  163 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY  163 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence            998632              5678999999998622889987 432     2211   0   001111      123445


Q ss_pred             HHHHHHHHHHHHH----cCccEEEEecceeccccccccccC----CCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQI----GAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..+|+++..    .+++++++||+.++|+........    ......+...  .  +.+.++|+|++|+|++++.+
T Consensus       164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a~~~a  239 (322)
T PLN02986        164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVDVRDVALAHIKA  239 (322)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHHHHHH
Confidence            5599999887754    689999999999998753211000    0000122221  2  24568999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      ++++.. ++.|++. .+ .+|++|+++.+.+.++
T Consensus       240 l~~~~~-~~~yni~-~~-~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        240 LETPSA-NGRYIID-GP-IMSVNDIIDILRELFP  270 (322)
T ss_pred             hcCccc-CCcEEEe-cC-CCCHHHHHHHHHHHCC
Confidence            998654 3478884 34 7999999999999876

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.95  E-value=2.3e-26  Score=197.98  Aligned_cols=227  Identities=18%  Similarity=0.230  Sum_probs=166.2

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHcc--CCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQ--VDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~--~d~v   77 (292)
                      +|+||||||+||++++++|+++|  ++|++++|.......++.   +.+ ...+++++.+|++|++++.+++++  +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL---ADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh---hhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            69999999999999999999987  789988874321111121   222 134688999999999999999986  9999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhCCcc-eeec-cC---CCCCCc----cCCccCCCCcchHHHHHH
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAGNVK-RFLP-SE---FGNDVD----RSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~~~~-~~i~-s~---~g~~~~----~~~~~~~~~~~~~~~K~~  133 (292)
                      ||+|+...               +.++.+++++|.+.+ .+ ++++ |+   ||....    ....+..|...|..+|..
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~  156 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAA  156 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHH
Confidence            99998643               456889999998875 33 6766 43   553221    113344455556669999


Q ss_pred             HHHHHHH----cCccEEEEecceecccccc--ccccCC-CCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCC
Q 039623          134 IRRAIEA----EGIQYTYVSCNCFAGYFLP--TLAQIG-APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTL  206 (292)
Q Consensus       134 ~e~~~~~----~~~~~~~ir~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  206 (292)
                      +|.+++.    .+++++++||+.++|....  .+.... .....++++..++++++.++|+|++|+|+++..++++. ..
T Consensus       157 ~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~-~~  235 (317)
T TIGR01181       157 SDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG-RV  235 (317)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC-CC
Confidence            9998763    5899999999988875321  111000 01134556777888889999999999999999999864 34


Q ss_pred             CceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          207 NKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       207 ~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      +++|+++++. .+|++|+++.+.+.++.+
T Consensus       236 ~~~~~~~~~~-~~s~~~~~~~i~~~~~~~  263 (317)
T TIGR01181       236 GETYNIGGGN-ERTNLEVVETILELLGKD  263 (317)
T ss_pred             CceEEeCCCC-ceeHHHHHHHHHHHhCCC
Confidence            6789998665 899999999999999864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=7.1e-27  Score=201.82  Aligned_cols=223  Identities=16%  Similarity=0.197  Sum_probs=157.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+|||||||||||++++++|+++|++|++++|+....  .+...+..+.  ..+++++.+|+.|++.+.++++++|+|||
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP--KKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch--hhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            5799999999999999999999999999999974321  1111111111  24689999999999999999999999999


Q ss_pred             cCcCCC--------------chhHHHHHHHHHHh-CCcceeec-cC-----CCCCCc------cCCccCCC------Ccc
Q 039623           80 TVSRGQ--------------IPEQAKIIAAVKEA-GNVKRFLP-SE-----FGNDVD------RSQNVVEP------AKS  126 (292)
Q Consensus        80 ~a~~~~--------------~~~~~~l~~a~~~~-~~~~~~i~-s~-----~g~~~~------~~~~~~~~------~~~  126 (292)
                      +|+...              +.++.+++++|.+. + ++++|+ |+     |+....      .++.+..|      ...
T Consensus        83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~  161 (322)
T PLN02662         83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLW  161 (322)
T ss_pred             eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccch
Confidence            998532              57889999999987 6 889887 33     332110      00111122      124


Q ss_pred             hHHHHHHHHHHHH----HcCccEEEEecceeccccccccccCC---C-CCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          127 AYADKIKIRRAIE----AEGIQYTYVSCNCFAGYFLPTLAQIG---A-PAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~~K~~~e~~~~----~~~~~~~~ir~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..+|..+|+++.    +.+++++++||+.++|+.........   . ....+..  ..  +++.++|+|++|+|++++.
T Consensus       162 Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~v~Dva~a~~~  237 (322)
T PLN02662        162 YVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ--TF--PNASYRWVDVRDVANAHIQ  237 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc--cC--CCCCcCeEEHHHHHHHHHH
Confidence            5559999998875    36899999999998887532110000   0 0011111  11  2457899999999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                      +++++.. ++.|++.|  ..+|++|+++.+.+..+.
T Consensus       238 ~~~~~~~-~~~~~~~g--~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        238 AFEIPSA-SGRYCLVE--RVVHYSEVVKILHELYPT  270 (322)
T ss_pred             HhcCcCc-CCcEEEeC--CCCCHHHHHHHHHHHCCC
Confidence            9987644 34788863  479999999999998763

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.3e-26  Score=196.80  Aligned_cols=224  Identities=22%  Similarity=0.247  Sum_probs=167.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccC-CEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQV-DVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~-d~vi~~   80 (292)
                      |+|||||||||||++|++.|+++||+|++++|.....     ....    .+++++.+|++|.+...++...+ |+|||+
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~----~~~~~~~~d~~~~~~~~~~~~~~~d~vih~   71 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL-----DPLL----SGVEFVVLDLTDRDLVDELAKGVPDAVIHL   71 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccc-----cccc----cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence            4599999999999999999999999999999985432     1111    57899999999998888888887 999999


Q ss_pred             CcCCC----------------chhHHHHHHHHHHhCCcceeec-cC---CCCC----CccCC-ccCCCCcchHHHHHHHH
Q 039623           81 VSRGQ----------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGND----VDRSQ-NVVEPAKSAYADKIKIR  135 (292)
Q Consensus        81 a~~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~----~~~~~-~~~~~~~~~~~~K~~~e  135 (292)
                      |+...                +.++.+++++|++.+ ++++|+ |+   ++..    ...++ .+..|.++|..+|+.+|
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E  150 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAE  150 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHH
Confidence            98764                567999999999977 999988 33   3322    11112 34555554555999999


Q ss_pred             HHHHHc----CccEEEEecceecccccccccc-CCC-----CCCCCCc-eeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          136 RAIEAE----GIQYTYVSCNCFAGYFLPTLAQ-IGA-----PAPPREK-VTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       136 ~~~~~~----~~~~~~ir~~~~~~~~~~~~~~-~~~-----~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      +.+...    +++++++||+.++|........ ...     ....+.+ ....+++...++++|++|++++++.+++++.
T Consensus       151 ~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  230 (314)
T COG0451         151 QLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD  230 (314)
T ss_pred             HHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCC
Confidence            999863    5999999988777654322110 000     0123443 5566677888999999999999999999875


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      ..  .||+.+.....+++|+++.+.+.+|....
T Consensus       231 ~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         231 GG--VFNIGSGTAEITVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             Cc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence            44  77776432378999999999999998755

>PLN02650 dihydroflavonol-4-reductase

Probab=99.95  E-value=2.5e-26  Score=200.70  Aligned_cols=222  Identities=15%  Similarity=0.193  Sum_probs=155.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-----cCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-----NLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      ++|||||||||||++++++|+++|++|++++|+..     +...+..+.     ..+++++.+|++|.+.+.++++++|+
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~   80 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPA-----NVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTG   80 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcc-----hhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCE
Confidence            68999999999999999999999999999999732     222212211     12578999999999999999999999


Q ss_pred             EEEcCcCCC--------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCcc---C-Ccc----------CCCC
Q 039623           77 VISTVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDR---S-QNV----------VEPA  124 (292)
Q Consensus        77 vi~~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~---~-~~~----------~~~~  124 (292)
                      |||+|+...              +.++.+++++|++.+.+++||+ |+   ++.....   . +..          ..|.
T Consensus        81 ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (351)
T PLN02650         81 VFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG  160 (351)
T ss_pred             EEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence            999998542              5578999999998764678887 43   3221100   0 110          1122


Q ss_pred             cchHHHHHHHHHHHHH----cCccEEEEecceeccccccccccCCC----CCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          125 KSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIGA----PAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ++|..+|..+|+++..    .+++++++||+.++|+..........    ....++. ...+. .+.++|+|++|+|+++
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~r~~v~V~Dva~a~  238 (351)
T PLN02650        161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNE-AHYSI-IKQGQFVHLDDLCNAH  238 (351)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCc-cccCc-CCCcceeeHHHHHHHH
Confidence            3555699999987754    58999999999988874321111000    0011111 11221 2347999999999999


Q ss_pred             HHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          197 INSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       197 ~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      +.+++++.. ++.| ++++ ..+|++|+++.+.+.++
T Consensus       239 ~~~l~~~~~-~~~~-i~~~-~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        239 IFLFEHPAA-EGRY-ICSS-HDATIHDLAKMLREKYP  272 (351)
T ss_pred             HHHhcCcCc-CceE-EecC-CCcCHHHHHHHHHHhCc
Confidence            999987644 3466 5444 47999999999999775

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.95  E-value=1.5e-26  Score=196.57  Aligned_cols=207  Identities=18%  Similarity=0.203  Sum_probs=159.1

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi~~   80 (292)
                      ||||||||||+|+++++.|+++|++|++++|+                       .+|+.|.+++.+++++  +|+|||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence            68999999999999999999999999999885                       5799999999999985  5999999


Q ss_pred             CcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc---cCCccCCCCcchHHHHHHHHHHH
Q 039623           81 VSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD---RSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        81 a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~---~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      ++...               +.++.+++++|++.+ . ++|+ |+   |+....   .++.+..|.+.|..+|..+|+++
T Consensus        58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~  135 (287)
T TIGR01214        58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAI  135 (287)
T ss_pred             CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHH
Confidence            98643               456899999999887 5 5665 33   543211   11334445556666999999999


Q ss_pred             HHcCccEEEEecceecccccc-ccccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCC
Q 039623          139 EAEGIQYTYVSCNCFAGYFLP-TLAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       139 ~~~~~~~~~ir~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      +..+.+++++||+.++|.... .+..... ....++++...+  ++.++++|++|+|+++..+++.+...+++||+++++
T Consensus       136 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~  213 (287)
T TIGR01214       136 RAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSG  213 (287)
T ss_pred             HHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCC
Confidence            988999999999998876431 1111100 113344555554  357899999999999999998764567899998766


Q ss_pred             ccccHHHHHHHHHHHhCCCcc
Q 039623          217 NVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       217 ~~~t~~e~~~~~~~~~~~~~~  237 (292)
                       .+|+.|+++.+.+.+|.+..
T Consensus       214 -~~s~~e~~~~i~~~~~~~~~  233 (287)
T TIGR01214       214 -QCSWYEFAQAIFEEAGADGL  233 (287)
T ss_pred             -CcCHHHHHHHHHHHhCcccc
Confidence             89999999999999997644

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.95  E-value=5e-26  Score=197.96  Aligned_cols=230  Identities=15%  Similarity=0.147  Sum_probs=163.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh---hhcCCcEEEECCCCCHHHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI---FKNLGVNVLYGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~--~~d~   76 (292)
                      |+|||||||||||++++++|+++|++|++++|++......+.+.+..   ....+++++.+|++|.+++.++++  ++|+
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   86 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDE   86 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCCE
Confidence            78999999999999999999999999999998743211112211110   012458899999999999999988  4799


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcc-----eeec-c---CCCCCCc--cCCccCCCCcchHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVK-----RFLP-S---EFGNDVD--RSQNVVEPAKSAYAD  130 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~-----~~i~-s---~~g~~~~--~~~~~~~~~~~~~~~  130 (292)
                      |||+|+...               +.++.+++++|++.+ ++     +||+ |   .||....  .++.+..|.+.|..+
T Consensus        87 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~s  165 (340)
T PLN02653         87 VYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVA  165 (340)
T ss_pred             EEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHH
Confidence            999999743               457899999999987 64     6766 3   4675322  114555566666679


Q ss_pred             HHHHHHHHHH----cCccEEEEe-cceeccccccccccCCC-----CCCCCCcee-ecCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA----EGIQYTYVS-CNCFAGYFLPTLAQIGA-----PAPPREKVT-IFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir-~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |.++|++++.    .+++++..| .+.+++.....+....+     ....+.... ..+++++.++|+|++|+|++++.+
T Consensus       166 K~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~  245 (340)
T PLN02653        166 KVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLM  245 (340)
T ss_pred             HHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHH
Confidence            9999999864    466666665 44444432211110000     001233333 458899999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      +++..  ++.||+++ ++.+|++|+++.+.+.+|.+
T Consensus       246 ~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        246 LQQEK--PDDYVVAT-EESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             HhcCC--CCcEEecC-CCceeHHHHHHHHHHHcCCC
Confidence            98753  46788864 45899999999999999854

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=3e-26  Score=187.81  Aligned_cols=209  Identities=16%  Similarity=0.201  Sum_probs=167.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||||++|++|+.|++.|. .+++|++++|.                       ..|++|++.+.++++  ++|+|||
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~-----------------------~~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRA-----------------------ELDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCc-----------------------cccccChHHHHHHHHhhCCCEEEE
Confidence            449999999999999999999 77999999997                       389999999999998  6899999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeeccC---CCCCC---ccCCccCCCCcchHHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPSE---FGNDV---DRSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s~---~g~~~---~~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      +|+.+.               ..+..+++++|.+.| .+.+..|+   |....   ..+++++.|.+-|+.||+..|+.+
T Consensus        57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v  135 (281)
T COG1091          57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAV  135 (281)
T ss_pred             CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHH
Confidence            999877               578999999999999 55554452   32222   222666777776666999999999


Q ss_pred             HHcCccEEEEecceeccccccccccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCc
Q 039623          139 EAEGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGN  217 (292)
Q Consensus       139 ~~~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~  217 (292)
                      ++.+.+..++|.+|+++..-.+|...++ ....++++.+..  ||..++++..|+|+++..++..... +++||+.+++ 
T Consensus       136 ~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g-  211 (281)
T COG1091         136 RAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSG-  211 (281)
T ss_pred             HHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCC-
Confidence            9999999999999999875544443322 123444555554  7899999999999999999987644 4499999988 


Q ss_pred             cccHHHHHHHHHHHhCCCccee
Q 039623          218 VYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       218 ~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      ..||.|+++.+.+..+.+....
T Consensus       212 ~~Swydfa~~I~~~~~~~~~v~  233 (281)
T COG1091         212 ECSWYEFAKAIFEEAGVDGEVI  233 (281)
T ss_pred             cccHHHHHHHHHHHhCCCcccc
Confidence            7899999999999998655433

>PLN02240 UDP-glucose 4-epimerase

Probab=99.95  E-value=7.8e-26  Score=197.71  Aligned_cols=238  Identities=18%  Similarity=0.207  Sum_probs=167.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~--~~d~   76 (292)
                      ++|+||||||++|+++++.|+++|++|++++|..... ......+...   ...+++++.+|++|.+.+.++++  ++|.
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~   84 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSS-EEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDA   84 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcch-HHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999998763221 1111111111   12468899999999999999886  6899


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc---cCCccCCCCcchHHHHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD---RSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~---~~~~~~~~~~~~~~~K~~~  134 (292)
                      |||+|+...               +.++.+++++|++.+ ++++|+ |+   ||....   .++.+..|...|..+|..+
T Consensus        85 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~  163 (352)
T PLN02240         85 VIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFI  163 (352)
T ss_pred             EEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            999998632               467889999999888 888887 43   553211   1144555666666699999


Q ss_pred             HHHHHH-----cCccEEEEecceecccccc-----------c-cccCCCCCC--CCCceeecC------CCcceEEeecc
Q 039623          135 RRAIEA-----EGIQYTYVSCNCFAGYFLP-----------T-LAQIGAPAP--PREKVTIFG------DGNAGAVYNKE  189 (292)
Q Consensus       135 e~~~~~-----~~~~~~~ir~~~~~~~~~~-----------~-~~~~~~~~~--~~~~~~~~~------~~~~~~~~i~v  189 (292)
                      |++++.     .+++++++|+..++|...+           . +........  ....+.+.+      ++.+.++|+|+
T Consensus       164 e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  243 (352)
T PLN02240        164 EEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHV  243 (352)
T ss_pred             HHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEH
Confidence            999863     3578889997666553210           0 000000001  112333443      67889999999


Q ss_pred             chHHHHHHHhhcCC----cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          190 DDIATYTINSIDGP----RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       190 ~D~a~~~~~~l~~~----~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +|+|++++.+++..    ...+++||++++. .+|++|+++.+.+.+|.+.++...+
T Consensus       244 ~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~  299 (352)
T PLN02240        244 MDLADGHIAALRKLFTDPDIGCEAYNLGTGK-GTSVLEMVAAFEKASGKKIPLKLAP  299 (352)
T ss_pred             HHHHHHHHHHHhhhhhccCCCCceEEccCCC-cEeHHHHHHHHHHHhCCCCCceeCC
Confidence            99999998888642    3345788887654 9999999999999999776665443

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.7e-26  Score=214.58  Aligned_cols=238  Identities=12%  Similarity=0.132  Sum_probs=170.4

Q ss_pred             ceEEEEccCCcchHHHHHHHH--hCCCCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEECCCCCH------HHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASV--KAGHPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYGDLQDH------ESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~D~~d~------~~~~~~~~   72 (292)
                      |+|||||||||||++|++.|+  +.|++|++++|+..   ..+...+ ......+++++.+|++|+      +.+.++ .
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS---LSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch---HHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            689999999999999999999  47899999999632   1222111 111125789999999984      455555 8


Q ss_pred             cCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCccC--C---ccCCCCcchHHHH
Q 039623           73 QVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDRS--Q---NVVEPAKSAYADK  131 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~~--~---~~~~~~~~~~~~K  131 (292)
                      ++|+|||||+...            +.++.+++++|++.+ ++++|+ |+   ||......  +   .+..+.++|..+|
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK  155 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTK  155 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCccccccchhhcCCCCchHHHH
Confidence            9999999998643            778999999999998 899887 33   44322110  1   1122334566699


Q ss_pred             HHHHHHHHH-cCccEEEEecceecccccccccc---------CCC--CCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          132 IKIRRAIEA-EGIQYTYVSCNCFAGYFLPTLAQ---------IGA--PAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       132 ~~~e~~~~~-~~~~~~~ir~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      +++|+++.+ .+++++++||+.++|........         ..+  ...........+.+....+++|++|+++++..+
T Consensus       156 ~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~  235 (657)
T PRK07201        156 FEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL  235 (657)
T ss_pred             HHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence            999999984 68999999999998853211000         000  001111233445556678999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc---ceeecCHHH
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL---EKTYVAEEK  245 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~---~~~~~~~~~  245 (292)
                      +..+...+++||+++++ .+|++|+++.+.+.+|.+.   ....+|...
T Consensus       236 ~~~~~~~g~~~ni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~  283 (657)
T PRK07201        236 MHKDGRDGQTFHLTDPK-PQRVGDIYNAFARAAGAPPDARLFGFLPGFV  283 (657)
T ss_pred             hcCcCCCCCEEEeCCCC-CCcHHHHHHHHHHHhCCCccccccccCChHH
Confidence            98765667899998766 8999999999999999877   556666554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.95  E-value=4e-26  Score=199.17  Aligned_cols=227  Identities=16%  Similarity=0.156  Sum_probs=163.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHc--cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      |+|||||||||||+++++.|+++|++|++++|+....    ......+ ...++.++.+|++|.+++.++++  ++|+||
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS----PNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccc----hhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            7899999999999999999999999999999874321    1111111 12357889999999999999998  479999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCC----ccCCccCCCCcchHHHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDV----DRSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~----~~~~~~~~~~~~~~~~K~~~e  135 (292)
                      |+|+...               +.++.+++++|++.+.++++|+ |+   ||...    ..+..+..|.++|..+|..+|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e  160 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAE  160 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHH
Confidence            9998532               5678999999987653678887 33   55321    111334455666777999999


Q ss_pred             HHHHHc-----------CccEEEEecceecccccc---ccccCCCC-CCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          136 RAIEAE-----------GIQYTYVSCNCFAGYFLP---TLAQIGAP-APPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       136 ~~~~~~-----------~~~~~~ir~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .+++..           +++++++||+.++|+...   .+...... ...++.+ .++++++.++|+|++|+|++++.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~~~~  239 (349)
T TIGR02622       161 LVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYLLLA  239 (349)
T ss_pred             HHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHHHHH
Confidence            888641           799999999988876321   11110001 1234444 4567889999999999999999887


Q ss_pred             cCC----cCCCceEEEcCC-CccccHHHHHHHHHHHhC
Q 039623          201 DGP----RTLNKTLYIRPP-GNVYSFNELVTLWENKIG  233 (292)
Q Consensus       201 ~~~----~~~~~~~~~~~~-~~~~t~~e~~~~~~~~~~  233 (292)
                      +..    ...++.||+.+. ++..+..|+++.+.+.++
T Consensus       240 ~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~  277 (349)
T TIGR02622       240 EKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW  277 (349)
T ss_pred             HHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence            642    123578998742 358999999999988765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.94  E-value=2.2e-27  Score=200.70  Aligned_cols=216  Identities=19%  Similarity=0.187  Sum_probs=152.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      ||||||||+|++|++|.+.|.+.|++|+++.|+                       ..|+.|.+.+.++++  ++|+|||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~~pd~Vin   57 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAFKPDVVIN   57 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence            899999999999999999999999999999775                       788999999999987  5999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeeccC---CCCC----CccCCccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPSE---FGND----VDRSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s~---~g~~----~~~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      ||+...               +.++.+++++|.+.+ ++.+..|+   |+..    ..+ ++++.|.+.|+.+|+++|+.
T Consensus        58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y~E-~d~~~P~~~YG~~K~~~E~~  135 (286)
T PF04321_consen   58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPYTE-DDPPNPLNVYGRSKLEGEQA  135 (286)
T ss_dssp             ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-T-TS----SSHHHHHHHHHHHH
T ss_pred             cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCccccccc-CCCCCCCCHHHHHHHHHHHH
Confidence            999865               678999999999998 65554443   5333    223 66777777777799999999


Q ss_pred             HHHcCccEEEEecceeccccccccccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc---CCCceEEEc
Q 039623          138 IEAEGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR---TLNKTLYIR  213 (292)
Q Consensus       138 ~~~~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~  213 (292)
                      +++...++.|+|+++++|.....+..... ....++.+.+..  ++.+++++++|+|+++..++++..   ...++||++
T Consensus       136 v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~  213 (286)
T PF04321_consen  136 VRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLS  213 (286)
T ss_dssp             HHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE--
T ss_pred             HHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEe
Confidence            99877799999999988873333322211 113455566655  668999999999999999998753   245899999


Q ss_pred             CCCccccHHHHHHHHHHHhCCCc-ceeecCHHH
Q 039623          214 PPGNVYSFNELVTLWENKIGKTL-EKTYVAEEK  245 (292)
Q Consensus       214 ~~~~~~t~~e~~~~~~~~~~~~~-~~~~~~~~~  245 (292)
                      |++ .+|+.|+++.+.+.+|.+. .+..++..+
T Consensus       214 ~~~-~~S~~e~~~~i~~~~~~~~~~i~~~~~~~  245 (286)
T PF04321_consen  214 GPE-RVSRYEFAEAIAKILGLDPELIKPVSSSE  245 (286)
T ss_dssp             -BS--EEHHHHHHHHHHHHTHCTTEEEEESSTT
T ss_pred             cCc-ccCHHHHHHHHHHHhCCCCceEEeccccc
Confidence            887 8999999999999999766 555555444

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=2.9e-25  Score=181.80  Aligned_cols=239  Identities=22%  Similarity=0.219  Sum_probs=179.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      ++||||||+||||+|.+-+|+++|++|.+++.-.... .+....++.+..  .++.++++|+.|.+.+.++|+  ++|.|
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~-~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY-LESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc-hhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            5799999999999999999999999999998754444 445555566655  789999999999999999998  79999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhCCcceeecc----CCCCCCccC---CccCC-CCcchHHHHHHH
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPS----EFGNDVDRS---QNVVE-PAKSAYADKIKI  134 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s----~~g~~~~~~---~~~~~-~~~~~~~~K~~~  134 (292)
                      +|+|+...               +.++.++++.|++++ ++.+++|    +||......   ..+.. |.++|.++|..+
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i  160 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI  160 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence            99999765               789999999999999 9999983    477643221   44444 788888899999


Q ss_pred             HHHHHH----cCccEEEEe-cceecc--c--------cccccccCCCC----------CCCCCceeecCCCcceEEeecc
Q 039623          135 RRAIEA----EGIQYTYVS-CNCFAG--Y--------FLPTLAQIGAP----------APPREKVTIFGDGNAGAVYNKE  189 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir-~~~~~~--~--------~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~v  189 (292)
                      |+++..    .+..++.+| ++.++.  .        ..+..+.....          ...+.+.+ ..+|+.++++||+
T Consensus       161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~-t~dgt~vrdyi~v  239 (343)
T KOG1371|consen  161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYT-TIDGTIVRDYIHV  239 (343)
T ss_pred             HHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCccc-ccCCCeeecceee
Confidence            999986    345667777 555551  1        11111111000          01112222 2345889999999


Q ss_pred             chHHHHHHHhhcCCcC--CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHH
Q 039623          190 DDIATYTINSIDGPRT--LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE  244 (292)
Q Consensus       190 ~D~a~~~~~~l~~~~~--~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~  244 (292)
                      -|+|.....++.+.+.  .-++||+ |.+...+..+++.+++++.|.++++..++.+
T Consensus       240 ~Dla~~h~~al~k~~~~~~~~i~Nl-gtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R  295 (343)
T KOG1371|consen  240 LDLADGHVAALGKLRGAAEFGVYNL-GTGKGSSVLELVTAFEKALGVKIKKKVVPRR  295 (343)
T ss_pred             EehHHHHHHHhhccccchheeeEee-cCCCCccHHHHHHHHHHHhcCCCCccccCCC
Confidence            9999999999987643  2346666 4666889999999999999998887777653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.94  E-value=1.3e-25  Score=193.71  Aligned_cols=211  Identities=20%  Similarity=0.293  Sum_probs=158.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHh-hhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIE-IFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+||||||+|+||++++++|+++|  ++|++++|+.     .+...+. .+...++.++.+|++|.+++.++++++|+||
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~-----~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vi   79 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDE-----LKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVV   79 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCCh-----hHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence            689999999999999999999986  7899999873     2222111 2223468899999999999999999999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH--
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA--  140 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~--  140 (292)
                      |+||...               +.++.+++++|++.+ ++++|+ |+..        +..|.++|..+|..+|++++.  
T Consensus        80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~--------~~~p~~~Y~~sK~~~E~l~~~~~  150 (324)
T TIGR03589        80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDK--------AANPINLYGATKLASDKLFVAAN  150 (324)
T ss_pred             ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC--------CCCCCCHHHHHHHHHHHHHHHHH
Confidence            9998643               468999999999988 888887 4421        123455666699999998753  


Q ss_pred             -----cCccEEEEecceecccc---ccccccCCCCCCCCC-ceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEE
Q 039623          141 -----EGIQYTYVSCNCFAGYF---LPTLAQIGAPAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLY  211 (292)
Q Consensus       141 -----~~~~~~~ir~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  211 (292)
                           .|++++++||+.++|+.   .+.+....   ..+. .+++ .++.+.++|+|++|++++++.+++... .+++| 
T Consensus       151 ~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~---~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~~~-  224 (324)
T TIGR03589       151 NISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLK---EEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GGEIF-  224 (324)
T ss_pred             hhccccCcEEEEEeecceeCCCCCcHHHHHHHH---HhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CCCEE-
Confidence                 57999999999998752   22222211   1232 3444 467888999999999999999998643 34555 


Q ss_pred             EcCCCccccHHHHHHHHHHHhC
Q 039623          212 IRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       212 ~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      + +.+..+++.|+++.+.+...
T Consensus       225 ~-~~~~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       225 V-PKIPSMKITDLAEAMAPECP  245 (324)
T ss_pred             c-cCCCcEEHHHHHHHHHhhCC
Confidence            4 44557999999999998653

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.94  E-value=1.1e-25  Score=193.26  Aligned_cols=214  Identities=16%  Similarity=0.162  Sum_probs=147.5

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HH-HHHHHc-----cC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ES-LIKAIK-----QV   74 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~-~~~~~~-----~~   74 (292)
                      |||||||||||++|++.|+++|++++++.|+....  .+.          .....+|+.|.   ++ +.+++.     ++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~--~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG--TKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcc--hHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            89999999999999999999999888877763211  000          01223455443   33 333432     68


Q ss_pred             CEEEEcCcCCC-------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc---cCCccCCCCcchHHHHHHH
Q 039623           75 DVVISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD---RSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        75 d~vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~---~~~~~~~~~~~~~~~K~~~  134 (292)
                      |+|||+|+...             +.++.+++++|++.+ ++ +|+ |+   ||....   .+..+..|.++|..+|..+
T Consensus        70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  147 (308)
T PRK11150         70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLF  147 (308)
T ss_pred             cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHH
Confidence            99999997432             567899999999988 74 666 43   664321   1133445666666799999


Q ss_pred             HHHHHH----cCccEEEEecceeccccccc--cccCC-----CCCCCCCceeec-CCCcceEEeeccchHHHHHHHhhcC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLPT--LAQIG-----APAPPREKVTIF-GDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      |++++.    .+++++++||+.++|.....  .....     ....+++...+. ++++..++|+|++|+|++++.++++
T Consensus       148 E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~  227 (308)
T PRK11150        148 DEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN  227 (308)
T ss_pred             HHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence            988875    48999999988888764311  10000     001233333333 5667789999999999999999886


Q ss_pred             CcCCCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          203 PRTLNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       203 ~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                      ..  +++||+++.. .+|+.|+++.+.+.++.
T Consensus       228 ~~--~~~yni~~~~-~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        228 GV--SGIFNCGTGR-AESFQAVADAVLAYHKK  256 (308)
T ss_pred             CC--CCeEEcCCCC-ceeHHHHHHHHHHHhCC
Confidence            43  4678887554 89999999999999874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.94  E-value=1.2e-25  Score=194.40  Aligned_cols=223  Identities=16%  Similarity=0.183  Sum_probs=156.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+||||||+||||+++++.|+++|++|++++|+....  .+...+....  ..+++++.+|++|.+++.++++++|+|||
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR--KKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch--hhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            6899999999999999999999999999999884321  1111111111  24688999999999999999999999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCC-----c---cCCccCCC------Ccc
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDV-----D---RSQNVVEP------AKS  126 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~-----~---~~~~~~~~------~~~  126 (292)
                      +||...               +.++.+++++|.+...++++|+ |+   |+...     .   .++.+..|      .+.
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            998532               5678899999988532678876 33   32211     0   10222222      234


Q ss_pred             hHHHHHHHHHHHHH----cCccEEEEecceeccccccccccC---CC-CCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          127 AYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQI---GA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..+|..+|+++..    .+++++++||+.++|+........   .+ ....++..  .+  .+.++|+|++|+|++++.
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dva~a~~~  239 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP--FN--TTHHRFVDVRDVALAHVK  239 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC--CC--CcCcCeeEHHHHHHHHHH
Confidence            55599999988764    589999999999988653221000   00 00122222  11  345789999999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      +++++.. ++.||+. .+ .+|++|+++.+.+.++
T Consensus       240 ~l~~~~~-~~~~ni~-~~-~~s~~ei~~~i~~~~~  271 (325)
T PLN02989        240 ALETPSA-NGRYIID-GP-VVTIKDIENVLREFFP  271 (325)
T ss_pred             HhcCccc-CceEEEe-cC-CCCHHHHHHHHHHHCC
Confidence            9987654 4588884 44 8999999999999987

>PRK05865 hypothetical protein; Provisional

Probab=99.94  E-value=1.4e-25  Score=210.20  Aligned_cols=194  Identities=16%  Similarity=0.229  Sum_probs=156.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+|||||||||++++++|+++|++|++++|+...    .       ...+++++.+|+.|.+++.++++++|+|||+|
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~----~-------~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA   69 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD----S-------WPSSADFIAADIRDATAVESAMTGADVVAHCA   69 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh----h-------cccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence            689999999999999999999999999999997321    0       12368899999999999999999999999999


Q ss_pred             cCCC------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceec
Q 039623           82 SRGQ------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFA  154 (292)
Q Consensus        82 ~~~~------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~  154 (292)
                      +...      +.++.+++++|++.+ ++++|+ |+..                   |.++|+++.+++++++++||+.++
T Consensus        70 a~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~VY  129 (854)
T PRK05865         70 WVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALIF  129 (854)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceEe
Confidence            8653      678999999999998 889887 4421                   889999998899999999999988


Q ss_pred             cccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHH
Q 039623          155 GYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENK  231 (292)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~  231 (292)
                      |...+.+....    ....+...+.++..++|+|++|+|+++..+++++...+++||+++++ .+|++|+++.+.+.
T Consensus       130 GP~~~~~i~~l----l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~-~~Si~EIae~l~~~  201 (854)
T PRK05865        130 GRNVDNWVQRL----FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPG-ELTFRRIAAALGRP  201 (854)
T ss_pred             CCChHHHHHHH----hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCC-cccHHHHHHHHhhh
Confidence            87543332221    11222333455667899999999999999997654456789998766 89999999998874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.94  E-value=2.9e-25  Score=192.15  Aligned_cols=229  Identities=18%  Similarity=0.236  Sum_probs=165.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|++.     +.   ..+...+++++.+|+.|.+++.++++++|+|||++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~-----~~---~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a   72 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTS-----DR---RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVA   72 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCc-----cc---cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence            58999999999999999999999999999999743     22   11223478999999999999999999999999999


Q ss_pred             cCCC-------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc----cCCccCCC---CcchHHHHHHHHHH
Q 039623           82 SRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD----RSQNVVEP---AKSAYADKIKIRRA  137 (292)
Q Consensus        82 ~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~----~~~~~~~~---~~~~~~~K~~~e~~  137 (292)
                      +...             +.++.++++++++.+ ++++|+ |+   ||....    .++.+..+   ...|..+|..+|++
T Consensus        73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  151 (328)
T TIGR03466        73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQA  151 (328)
T ss_pred             eecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHH
Confidence            7532             567899999999988 899887 33   553111    10222222   12344599999998


Q ss_pred             HHH----cCccEEEEecceecccccccccc---CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceE
Q 039623          138 IEA----EGIQYTYVSCNCFAGYFLPTLAQ---IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL  210 (292)
Q Consensus       138 ~~~----~~~~~~~ir~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  210 (292)
                      ++.    .+++++++||+.++|........   .......+ ......  +...+++|++|+|++++.+++++. .+..|
T Consensus       152 ~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~  227 (328)
T TIGR03466       152 ALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNG-KMPAYV--DTGLNLVHVDDVAEGHLLALERGR-IGERY  227 (328)
T ss_pred             HHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcC-CCceee--CCCcceEEHHHHHHHHHHHHhCCC-CCceE
Confidence            875    48999999999988764321100   00000111 112222  234689999999999999998754 45566


Q ss_pred             EEcCCCccccHHHHHHHHHHHhCCCcceeecCHHH
Q 039623          211 YIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEK  245 (292)
Q Consensus       211 ~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~  245 (292)
                      ++ ++ +.+|++|+++.+.+.+|.+.....+|...
T Consensus       228 ~~-~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~  260 (328)
T TIGR03466       228 IL-GG-ENLTLKQILDKLAEITGRPAPRVKLPRWL  260 (328)
T ss_pred             Ee-cC-CCcCHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence            55 44 48999999999999999877766666543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.94  E-value=3.4e-25  Score=175.88  Aligned_cols=176  Identities=28%  Similarity=0.395  Sum_probs=140.0

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCcC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSR   83 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~~   83 (292)
                      |+|+||||++|+.++++|+++|++|++++|+     +++.+.     ..+++++.+|+.|++++.++++++|+||++++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~-----~~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRS-----PSKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESS-----GGGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecC-----chhccc-----ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            7999999999999999999999999999999     555432     679999999999999999999999999999987


Q ss_pred             CC--chhHHHHHHHHHHhCCcceeec-cCCCCCCccC----CccCCCCcchHHHHHHHHHHHHHcCccEEEEecceeccc
Q 039623           84 GQ--IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRS----QNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGY  156 (292)
Q Consensus        84 ~~--~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~----~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~  156 (292)
                      ..  ....++++++|++++ ++++++ |+.+......    .........|+..|...|+++++.+++|+++||+.++++
T Consensus        71 ~~~~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~  149 (183)
T PF13460_consen   71 PPKDVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGN  149 (183)
T ss_dssp             TTTHHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBT
T ss_pred             hcccccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeC
Confidence            55  788999999999998 999887 5555333220    001111235667999999999999999999999999988


Q ss_pred             cccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          157 FLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      ... .           .......+....++|+.+|+|++++.++++
T Consensus       150 ~~~-~-----------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  150 PSR-S-----------YRLIKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             TSS-S-----------EEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             CCc-c-----------eeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            422 1           111111345566999999999999998864

...

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.94  E-value=6.6e-26  Score=181.46  Aligned_cols=225  Identities=20%  Similarity=0.288  Sum_probs=177.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~--~~d~   76 (292)
                      ++++||||+||||++.+..+...  .++.+.++--.--+  . ...++. ...++.+++.+|+.|...+.-++.  ..|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s--~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCS--N-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccc--c-cchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence            47999999999999999999987  35655554321111  1 111122 135789999999999998888886  6999


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCccC----CccCCCCcchHHHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVDRS----QNVVEPAKSAYADKIK  133 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~~~----~~~~~~~~~~~~~K~~  133 (292)
                      |||.|+..+               +.++..++++++..|++++|++    ++||+.....    .+.+.|.++|.++|++
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaA  163 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAA  163 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHH
Confidence            999999876               7789999999999988999998    5688765442    4567788888889999


Q ss_pred             HHHHHHH----cCccEEEEecceecccc------ccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          134 IRRAIEA----EGIQYTYVSCNCFAGYF------LPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       134 ~e~~~~~----~~~~~~~ir~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      +|+++++    ++++++++|.+.++|+.      +|-++..   ...+++.++.++|.+.++++|++|+++++-.++++.
T Consensus       164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l---~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg  240 (331)
T KOG0747|consen  164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKL---AMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG  240 (331)
T ss_pred             HHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHH---HHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC
Confidence            9999986    68999999977777652      2322221   245778889999999999999999999999999985


Q ss_pred             cCCCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          204 RTLNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       204 ~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                       ..|++||+. +.+..+..|+++.+.+...+
T Consensus       241 -~~geIYNIg-td~e~~~~~l~k~i~eli~~  269 (331)
T KOG0747|consen  241 -ELGEIYNIG-TDDEMRVIDLAKDICELFEK  269 (331)
T ss_pred             -Cccceeecc-CcchhhHHHHHHHHHHHHHH
Confidence             468888886 55599999999999987764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.94  E-value=5.2e-25  Score=189.47  Aligned_cols=226  Identities=15%  Similarity=0.160  Sum_probs=158.7

Q ss_pred             EEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc----cCCEEE
Q 039623            4 TLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK----QVDVVI   78 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~vi   78 (292)
                      |||||||||||+++++.|.++|+ +|.+++|....   .+.   ..+   ....+.+|+.+.+.+..+.+    ++|+||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~---~~~---~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG---HKF---LNL---ADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCc---hhh---hhh---hheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            69999999999999999999997 78888776321   111   111   12456788888887777664    799999


Q ss_pred             EcCcCCC-------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC--Ccc-CCCCcchHHHHHHHHHHH
Q 039623           79 STVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS--QNV-VEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        79 ~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~--~~~-~~~~~~~~~~K~~~e~~~  138 (292)
                      |+|+...             +.++.+++++|++.+ + ++|+ |   +||......  +.+ ..|.+.|..+|..+|+++
T Consensus        72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  149 (314)
T TIGR02197        72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYV  149 (314)
T ss_pred             ECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHH
Confidence            9998643             578899999999988 6 5665 4   355322111  222 235555556999999988


Q ss_pred             HH------cCccEEEEecceeccccccc------cccCCC-CCCCCCceee------cCCCcceEEeeccchHHHHHHHh
Q 039623          139 EA------EGIQYTYVSCNCFAGYFLPT------LAQIGA-PAPPREKVTI------FGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       139 ~~------~~~~~~~ir~~~~~~~~~~~------~~~~~~-~~~~~~~~~~------~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ++      .+++++++|++.++|.....      +....+ ....++++.+      ++++++.++++|++|+++++..+
T Consensus       150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~  229 (314)
T TIGR02197       150 RRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWL  229 (314)
T ss_pred             HHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHH
Confidence            64      24689999988888764221      000000 0123334433      35678889999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCH
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE  243 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  243 (292)
                      +..  ..+++||++++. .+|++|+++.+.+.+|.+..+...+.
T Consensus       230 ~~~--~~~~~yni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~  270 (314)
T TIGR02197       230 LEN--GVSGIFNLGTGR-ARSFNDLADAVFKALGKDEKIEYIPM  270 (314)
T ss_pred             Hhc--ccCceEEcCCCC-CccHHHHHHHHHHHhCCCCcceeccC
Confidence            987  345688887665 89999999999999997654444443

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=2.8e-24  Score=185.86  Aligned_cols=234  Identities=21%  Similarity=0.278  Sum_probs=166.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      +||||||||+||+++++.|+++|++|++++|..... .++.   .... ..+++.+.+|+.|.+++.++++  ++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGS-PEAL---KRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccc-hhhh---hhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            689999999999999999999999999887643211 1111   1111 1257889999999999999987  6999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      ++|...               +.++.+++++|.+.+ ++++++ |   .||....   .++.+..|...|..+|..+|++
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~  155 (328)
T TIGR01179        77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERI  155 (328)
T ss_pred             CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHH
Confidence            998642               567889999999988 888887 3   2443221   1133444556666699999998


Q ss_pred             HHH-----cCccEEEEecceeccccccccccC------CC-------CCCCCCceee------cCCCcceEEeeccchHH
Q 039623          138 IEA-----EGIQYTYVSCNCFAGYFLPTLAQI------GA-------PAPPREKVTI------FGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       138 ~~~-----~~~~~~~ir~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~------~~~~~~~~~~i~v~D~a  193 (292)
                      ++.     .+++++++||+.++|.........      .+       .....+.+..      .+++++.++|+|++|++
T Consensus       156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a  235 (328)
T TIGR01179       156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA  235 (328)
T ss_pred             HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence            874     579999999988887642211000      00       0001222222      23567789999999999


Q ss_pred             HHHHHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          194 TYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       194 ~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +++..++...  ...+++||++++. .+|++|+++.+.+.+|.+..+...+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~n~~~~~-~~s~~ei~~~~~~~~g~~~~~~~~~  285 (328)
T TIGR01179       236 DAHLAALEYLLNGGESHVYNLGYGQ-GFSVLEVIEAFKKVSGVDFPVELAP  285 (328)
T ss_pred             HHHHHHHhhhhcCCCcceEEcCCCC-cccHHHHHHHHHHHhCCCcceEeCC
Confidence            9999999752  2346788887655 8999999999999999877665444

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.94  E-value=6e-25  Score=188.42  Aligned_cols=210  Identities=18%  Similarity=0.177  Sum_probs=154.0

Q ss_pred             EEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEEcCc
Q 039623            5 LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVISTVS   82 (292)
Q Consensus         5 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~~a~   82 (292)
                      ||||||||||++|++.|++.|++|+++.+.                      ..+|+.|.+++.++++  ++|+|||||+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKEKPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence            699999999999999999999988766443                      1589999999999887  5899999997


Q ss_pred             CCC----------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---Cc----cCCCCcchHH-HHHHH
Q 039623           83 RGQ----------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QN----VVEPAKSAYA-DKIKI  134 (292)
Q Consensus        83 ~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~----~~~~~~~~~~-~K~~~  134 (292)
                      ...                +.++.+++++|++.+ ++++|+ |   .||......   +.    +..|.+..|. +|..+
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~  137 (306)
T PLN02725         59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG  137 (306)
T ss_pred             eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence            521                557999999999998 898887 3   355322111   11    3334444354 99999


Q ss_pred             HHHHH----HcCccEEEEecceeccccccc----------cccCC-CCCCCCCceee-cCCCcceEEeeccchHHHHHHH
Q 039623          135 RRAIE----AEGIQYTYVSCNCFAGYFLPT----------LAQIG-APAPPREKVTI-FGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       135 e~~~~----~~~~~~~~ir~~~~~~~~~~~----------~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |++++    ..+++++++||+.++|.....          +.... .....+.+... ++++++.++++|++|++++++.
T Consensus       138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            98765    368999999999888874321          00000 00022344444 6788999999999999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      +++.... .+.||+++ +..+|+.|+++.+.+.++.+..+.
T Consensus       218 ~~~~~~~-~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~~  256 (306)
T PLN02725        218 LMRRYSG-AEHVNVGS-GDEVTIKELAELVKEVVGFEGELV  256 (306)
T ss_pred             HHhcccc-CcceEeCC-CCcccHHHHHHHHHHHhCCCCcee
Confidence            9987533 45677765 449999999999999998765443

>PLN02996 fatty acyl-CoA reductase

Probab=99.93  E-value=1.6e-24  Score=195.63  Aligned_cols=233  Identities=14%  Similarity=0.150  Sum_probs=163.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC---CCEEEEecCCCCCCCc-ch--hh-----Hhh-----------hhcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG---HPTFALVRESTASDPV-KG--KL-----IEI-----------FKNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-~~--~~-----~~~-----------~~~~~v~~v~~   59 (292)
                      ++|+|||||||+|++|++.|++.+   .+|+++.|.....+.. +.  +.     +..           ....+++++.+
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            579999999999999999999865   3689999975432111 11  00     100           01257999999


Q ss_pred             CCC-------CHHHHHHHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc
Q 039623           60 DLQ-------DHESLIKAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR  116 (292)
Q Consensus        60 D~~-------d~~~~~~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~  116 (292)
                      |++       |.+.+..+++++|+|||+|+...            +.++.+++++|++.+.++++++ |   +||.....
T Consensus        92 Dl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~  171 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGL  171 (491)
T ss_pred             ccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCce
Confidence            998       45557778889999999998754            7889999999998633888887 3   35542210


Q ss_pred             C-Cc-----------------------------------------------------cCCCCcchHHHHHHHHHHHHH--
Q 039623          117 S-QN-----------------------------------------------------VVEPAKSAYADKIKIRRAIEA--  140 (292)
Q Consensus       117 ~-~~-----------------------------------------------------~~~~~~~~~~~K~~~e~~~~~--  140 (292)
                      . +.                                                     ...+.+.|..||+.+|+++.+  
T Consensus       172 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~  251 (491)
T PLN02996        172 ILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFK  251 (491)
T ss_pred             eeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhc
Confidence            0 00                                                     011234455599999999986  


Q ss_pred             cCccEEEEecceeccccccccccCC---------CC-CCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC--c-CCC
Q 039623          141 EGIQYTYVSCNCFAGYFLPTLAQIG---------AP-APPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP--R-TLN  207 (292)
Q Consensus       141 ~~~~~~~ir~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~-~~~  207 (292)
                      .+++++++||+.++|........+.         .. ...+....+++++++.+|++|++|++++++.++...  . ..+
T Consensus       252 ~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~  331 (491)
T PLN02996        252 ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSE  331 (491)
T ss_pred             CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCC
Confidence            4799999999999886432211100         00 122334457889999999999999999999998753  1 235


Q ss_pred             ceEEEcCC-CccccHHHHHHHHHHHhCC
Q 039623          208 KTLYIRPP-GNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       208 ~~~~~~~~-~~~~t~~e~~~~~~~~~~~  234 (292)
                      .+||++++ ..++|+.|+++.+.+..+.
T Consensus       332 ~vYNi~s~~~~~~s~~ei~~~~~~~~~~  359 (491)
T PLN02996        332 IIYHVGSSLKNPVKFSNLHDFAYRYFSK  359 (491)
T ss_pred             cEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence            67888744 2589999999999887764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.93  E-value=1.8e-24  Score=189.05  Aligned_cols=224  Identities=18%  Similarity=0.231  Sum_probs=154.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh-hcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF-KNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+||||||+||||++++++|+++|++|++++|+.     ++.+.+ ..+ ...+++++.+|++|.+.+.++++++|+|||
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   85 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDP-----AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH   85 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            6899999999999999999999999999999873     332211 111 124688999999999999999999999999


Q ss_pred             cCcCCC----------------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc--------cCC--ccC--
Q 039623           80 TVSRGQ----------------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD--------RSQ--NVV--  121 (292)
Q Consensus        80 ~a~~~~----------------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~--------~~~--~~~--  121 (292)
                      +|+...                      +.++.+++++|++.+.+++||+ |   +||....        .++  .+.  
T Consensus        86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~  165 (353)
T PLN02896         86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDH  165 (353)
T ss_pred             CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHH
Confidence            998632                      1467889999988743778886 3   3553210        101  111  


Q ss_pred             -----CCCcchHHHHHHHHHHHHH----cCccEEEEecceecccccccc----ccCCCCCCCCCc--eeecC---CCcce
Q 039623          122 -----EPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTL----AQIGAPAPPREK--VTIFG---DGNAG  183 (292)
Q Consensus       122 -----~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~---~~~~~  183 (292)
                           .+..+|..+|.++|+++..    .+++++++||+.++|+.....    .........+..  ....+   .....
T Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  245 (353)
T PLN02896        166 VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGS  245 (353)
T ss_pred             hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCc
Confidence                 1223555599999998764    589999999888888643211    100000001111  11111   11224


Q ss_pred             EEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          184 AVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       184 ~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      ++|||++|+|++++.+++.+.. ++.|+. + +..+|++|+++.+.+.++
T Consensus       246 ~dfi~v~Dva~a~~~~l~~~~~-~~~~~~-~-~~~~s~~el~~~i~~~~~  292 (353)
T PLN02896        246 IALVHIEDICDAHIFLMEQTKA-EGRYIC-C-VDSYDMSELINHLSKEYP  292 (353)
T ss_pred             eeEEeHHHHHHHHHHHHhCCCc-CccEEe-c-CCCCCHHHHHHHHHHhCC
Confidence            6999999999999999986543 346643 3 448999999999999886

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=3e-24  Score=171.99  Aligned_cols=223  Identities=22%  Similarity=0.300  Sum_probs=165.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+||||.||||+||+..|..+||.|++++.-....   |...-....+.+++.+.-|+..+     ++..+|.|+|+|
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~---k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLA   99 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR---KENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLA   99 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc---hhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhc
Confidence            5899999999999999999999999999998753321   22111223467788888887654     778899999999


Q ss_pred             cCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC--------CccCCCCcchHHHHHHH
Q 039623           82 SRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS--------QNVVEPAKSAYADKIKI  134 (292)
Q Consensus        82 ~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~--------~~~~~~~~~~~~~K~~~  134 (292)
                      ++.+               +.++.+.+-.|++.+  ++|++ |   +||......        -.+..|..-|...|..+
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~a  177 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVA  177 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHH
Confidence            9876               678999999999988  55554 3   488754332        11222233344499999


Q ss_pred             HHHHHH----cCccEEEEecceeccccccccccCC-----CCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIG-----APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      |.++..    .|+++.|.|+-..+|+.+.+.-...     ...+++++++++++|.|+++|.+++|+.++++.+++++..
T Consensus       178 E~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~  257 (350)
T KOG1429|consen  178 ETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR  257 (350)
T ss_pred             HHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc
Confidence            998875    5899999995444444332211111     1237899999999999999999999999999999998754


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      .  -+|+..|+ .+|+.|+++++.+..+....
T Consensus       258 ~--pvNiGnp~-e~Tm~elAemv~~~~~~~s~  286 (350)
T KOG1429|consen  258 G--PVNIGNPG-EFTMLELAEMVKELIGPVSE  286 (350)
T ss_pred             C--CcccCCcc-ceeHHHHHHHHHHHcCCCcc
Confidence            3  47887777 99999999999999864433

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.93  E-value=3.1e-24  Score=188.38  Aligned_cols=243  Identities=15%  Similarity=0.178  Sum_probs=166.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhh-h----------hcCCcEEEECCCCC------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEI-F----------KNLGVNVLYGDLQD------   63 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~----------~~~~v~~v~~D~~d------   63 (292)
                      +|+|||||||+|++++++|+++|  ++|++++|+.+..  ...+.+.. +          ...+++++.+|+++      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~   78 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEE--HAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLS   78 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHH--HHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcC
Confidence            68999999999999999999998  6799999984311  01111111 0          01579999999875      


Q ss_pred             HHHHHHHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc---cCCcc----
Q 039623           64 HESLIKAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD---RSQNV----  120 (292)
Q Consensus        64 ~~~~~~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~---~~~~~----  120 (292)
                      .+.+..+..++|+|||+|+...            +.++.+++++|.+.+ ++++++ |+   ++....   ..+.+    
T Consensus        79 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~  157 (367)
T TIGR01746        79 DAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTP  157 (367)
T ss_pred             HHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCcccccccccc
Confidence            3567777789999999998643            678999999999988 787776 43   332111   00111    


Q ss_pred             -CCCCcchHHHHHHHHHHHHH---cCccEEEEecceeccccccccccC-CCC--CCC-CCceeecCCCc-ceEEeeccch
Q 039623          121 -VEPAKSAYADKIKIRRAIEA---EGIQYTYVSCNCFAGYFLPTLAQI-GAP--APP-REKVTIFGDGN-AGAVYNKEDD  191 (292)
Q Consensus       121 -~~~~~~~~~~K~~~e~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~-~~~--~~~-~~~~~~~~~~~-~~~~~i~v~D  191 (292)
                       ..+...|..+|+.+|++++.   .|++++++||+.++|......... ...  ... .......+... ...++++++|
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vdd  237 (367)
T TIGR01746       158 PPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDY  237 (367)
T ss_pred             ccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHH
Confidence             11223455699999998875   389999999999987521110000 000  000 00011222233 2568999999


Q ss_pred             HHHHHHHhhcCCcC--CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHHHHHHHh
Q 039623          192 IATYTINSIDGPRT--LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQD  252 (292)
Q Consensus       192 ~a~~~~~~l~~~~~--~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (292)
                      ++++++.++..+..  .+++||+.++. .++++|+++.+.+ .|.+++  .++.++|...+..
T Consensus       238 va~ai~~~~~~~~~~~~~~~~~v~~~~-~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~~  296 (367)
T TIGR01746       238 VARAIVALSSQPAASAGGPVFHVVNPE-PVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLED  296 (367)
T ss_pred             HHHHHHHHHhCCCcccCCceEEecCCC-CCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHHH
Confidence            99999999987653  26789998765 9999999999998 787765  6888888887754

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.93  E-value=4.4e-24  Score=171.26  Aligned_cols=228  Identities=17%  Similarity=0.204  Sum_probs=155.8

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEEEcCc
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVISTVS   82 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi~~a~   82 (292)
                      |+||||||+||++|+..|.+.||+|++++|++...        +...+.++.       ..+.+.++.. ++|+|||+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~--------~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKA--------SQNLHPNVT-------LWEGLADALTLGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcch--------hhhcCcccc-------ccchhhhcccCCCCEEEECCC
Confidence            68999999999999999999999999999995433        111122222       2233444555 7999999999


Q ss_pred             CCC-----------------chhHHHHHHHHHHhCC-cceeec-cC---CCCCCccCCccCCCCcchHHHHH--HHHHHH
Q 039623           83 RGQ-----------------IPEQAKIIAAVKEAGN-VKRFLP-SE---FGNDVDRSQNVVEPAKSAYADKI--KIRRAI  138 (292)
Q Consensus        83 ~~~-----------------~~~~~~l~~a~~~~~~-~~~~i~-s~---~g~~~~~~~~~~~~~~~~~~~K~--~~e~~~  138 (292)
                      ..-                 +..|+.+.++..+... .+.+|. |.   ||...+..-+...|...-+.++.  ..|+..
T Consensus        66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a  145 (297)
T COG1090          66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEA  145 (297)
T ss_pred             CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHH
Confidence            765                 7889999998875542 456776 32   66654433111133333333322  234433


Q ss_pred             H---HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCC
Q 039623          139 E---AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPP  215 (292)
Q Consensus       139 ~---~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~  215 (292)
                      .   ..|.+++.+|.|+|.+..-..+..+. ...+.+----+|+|.|.++|||++|++++|..+++++. ..+.||+++|
T Consensus       146 ~~a~~~gtRvvllRtGvVLs~~GGaL~~m~-~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~-lsGp~N~taP  223 (297)
T COG1090         146 LQAQQLGTRVVLLRTGVVLSPDGGALGKML-PLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ-LSGPFNLTAP  223 (297)
T ss_pred             hhhhhcCceEEEEEEEEEecCCCcchhhhc-chhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC-CCCcccccCC
Confidence            3   35889999999999875322222211 00111222457999999999999999999999999865 4568999988


Q ss_pred             CccccHHHHHHHHHHHhCCCcceeecCHHHHHHHH
Q 039623          216 GNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDI  250 (292)
Q Consensus       216 ~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (292)
                      . +++.+++.+.+.++++++ ....+|...+...+
T Consensus       224 ~-PV~~~~F~~al~r~l~RP-~~~~vP~~~~rl~L  256 (297)
T COG1090         224 N-PVRNKEFAHALGRALHRP-AILPVPSFALRLLL  256 (297)
T ss_pred             C-cCcHHHHHHHHHHHhCCC-ccccCcHHHHHHHh
Confidence            8 999999999999999975 44556665555444

>PLN02583 cinnamoyl-CoA reductase

Probab=99.93  E-value=1e-23  Score=179.81  Aligned_cols=221  Identities=13%  Similarity=0.135  Sum_probs=152.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|+|||||||||++++++|+++||+|++++|+...  ....+.+..+.  ..+++++.+|++|.+++.+++.++|.|+|
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~--~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGE--TEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchh--hhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            579999999999999999999999999999996321  11111122221  24688999999999999999999999999


Q ss_pred             cCcCCC-------------chhHHHHHHHHHHhCCcceeec-cCC-----CCC-Ccc--C--CccCCCC------cchHH
Q 039623           80 TVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-SEF-----GND-VDR--S--QNVVEPA------KSAYA  129 (292)
Q Consensus        80 ~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s~~-----g~~-~~~--~--~~~~~~~------~~~~~  129 (292)
                      +++...             +.++.+++++|.+...++++|+ |+.     +.. ...  .  +....+.      ...|.
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            875432             6789999999988733788887 432     211 000  0  1111111      11355


Q ss_pred             -HHHHHHHHHH----HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          130 -DKIKIRRAIE----AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       130 -~K~~~e~~~~----~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                       +|..+|+++.    ..+++++++||+.++|.........    ..+ .....+.  ..++++|++|+|++++.+++.+.
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~----~~~-~~~~~~~--~~~~~v~V~Dva~a~~~al~~~~  237 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPY----LKG-AAQMYEN--GVLVTVDVNFLVDAHIRAFEDVS  237 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhh----hcC-CcccCcc--cCcceEEHHHHHHHHHHHhcCcc
Confidence             9999999885    3589999999999988754321111    111 1122222  24679999999999999999876


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      ..+ .|.+.++. ...+.++++.+.+.+.
T Consensus       238 ~~~-r~~~~~~~-~~~~~~~~~~~~~~~p  264 (297)
T PLN02583        238 SYG-RYLCFNHI-VNTEEDAVKLAQMLSP  264 (297)
T ss_pred             cCC-cEEEecCC-CccHHHHHHHHHHhCC
Confidence            555 56666433 5557889999888765

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=3.4e-24  Score=171.71  Aligned_cols=231  Identities=21%  Similarity=0.276  Sum_probs=185.9

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC-CcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL-GVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      +-|+|||||+|+.++++|.+.|-+|++..|....+ +   ..++-+-+. .+-+...|+.|+++++++++..++|||++|
T Consensus        64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~-~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIG  139 (391)
T KOG2865|consen   64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD-P---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIG  139 (391)
T ss_pred             EEEecccccccHHHHHHHhhcCCeEEEeccCCccc-h---hheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeec
Confidence            46889999999999999999999999999974322 2   111222122 377888999999999999999999999999


Q ss_pred             CCC-----------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEec
Q 039623           83 RGQ-----------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSC  150 (292)
Q Consensus        83 ~~~-----------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~  150 (292)
                      -..           +...+++++.|++.| +.+||+ |..|.+-..       .+.+..+|...|..+++.=.+.+|+||
T Consensus       140 rd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~s-------~Sr~LrsK~~gE~aVrdafPeAtIirP  211 (391)
T KOG2865|consen  140 RDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVKS-------PSRMLRSKAAGEEAVRDAFPEATIIRP  211 (391)
T ss_pred             cccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccccccC-------hHHHHHhhhhhHHHHHhhCCcceeech
Confidence            644           788999999999999 999998 888855332       567777999999999998888999999


Q ss_pred             ceecccc---ccccccCCCCCCCCCceeecCCCc-ceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHH
Q 039623          151 NCFAGYF---LPTLAQIGAPAPPREKVTIFGDGN-AGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVT  226 (292)
Q Consensus       151 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~  226 (292)
                      ..++|..   +..+....   .+-+.++.+..|. ....++++-|+|.+|+++++++.+.|++|.+.||. .+...|+++
T Consensus       212 a~iyG~eDrfln~ya~~~---rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~-~yql~eLvd  287 (391)
T KOG2865|consen  212 ADIYGTEDRFLNYYASFW---RKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD-RYQLSELVD  287 (391)
T ss_pred             hhhcccchhHHHHHHHHH---HhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc-hhhHHHHHH
Confidence            9999863   33222221   2345667777664 45678999999999999999999999999999998 999999999


Q ss_pred             HHHHHhCCCcceeecCHHHHHHHH
Q 039623          227 LWENKIGKTLEKTYVAEEKLLKDI  250 (292)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~  250 (292)
                      .|.+....-..+...|.+-++...
T Consensus       288 ~my~~~~~~~ry~r~~mP~f~a~a  311 (391)
T KOG2865|consen  288 IMYDMAREWPRYVRLPMPIFKAMA  311 (391)
T ss_pred             HHHHHHhhccccccCCcHHHHHHH
Confidence            999988776677777777655444

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.92  E-value=2.1e-23  Score=173.81  Aligned_cols=211  Identities=20%  Similarity=0.257  Sum_probs=149.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-HHHHHHHH-ccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-HESLIKAI-KQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~-~~~d~vi   78 (292)
                      ||+|+||||||++|+.++++|+++||+|+++.|+     +++...... ...+++++.+|++| .+.+.+.+ .++|+||
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD-----VDKAKTSLP-QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC-----HHHHHHhcc-cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            5899999999999999999999999999999998     333221111 13468999999998 46777778 6899999


Q ss_pred             EcCcCCC-----------chhHHHHHHHHHHhCCcceeec-cCCC---CCCccCCccC----CCCcchHHHHHHHHHHHH
Q 039623           79 STVSRGQ-----------IPEQAKIIAAVKEAGNVKRFLP-SEFG---NDVDRSQNVV----EPAKSAYADKIKIRRAIE  139 (292)
Q Consensus        79 ~~a~~~~-----------~~~~~~l~~a~~~~~~~~~~i~-s~~g---~~~~~~~~~~----~~~~~~~~~K~~~e~~~~  139 (292)
                      +++|...           ..++.++++++++.+ ++++|+ |+.+   ........+.    .+...++..|..+|++++
T Consensus        91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~  169 (251)
T PLN00141         91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIR  169 (251)
T ss_pred             ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            9988642           246899999999988 899887 5433   2211100000    011122347888999999


Q ss_pred             HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCC--Cc
Q 039623          140 AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPP--GN  217 (292)
Q Consensus       140 ~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~--~~  217 (292)
                      +.+++++++||+++.+....            +.+...........+|+.+|+|++++.++.++...+.++.+.+.  ..
T Consensus       170 ~~gi~~~iirpg~~~~~~~~------------~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        170 KSGINYTIVRPGGLTNDPPT------------GNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             hcCCcEEEEECCCccCCCCC------------ceEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            99999999999998765211            11111111111235799999999999999987766778888762  32


Q ss_pred             cccHHHHHHHHHH
Q 039623          218 VYSFNELVTLWEN  230 (292)
Q Consensus       218 ~~t~~e~~~~~~~  230 (292)
                      ..++++++..+++
T Consensus       238 ~~~~~~~~~~~~~  250 (251)
T PLN00141        238 KRSYKDLFASIKQ  250 (251)
T ss_pred             chhHHHHHHHhhc
Confidence            4788888887754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.92  E-value=1.5e-23  Score=178.52  Aligned_cols=225  Identities=19%  Similarity=0.201  Sum_probs=150.9

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCcC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSR   83 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~~   83 (292)
                      |||||||||||+++++.|++.|++|++++|+....     ....   ...    ..|+.. +.....+.++|+|||+|+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~---~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG-----ANTK---WEG----YKPWAP-LAESEALEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC-----Cccc---cee----eecccc-cchhhhcCCCCEEEECCCC
Confidence            69999999999999999999999999999985432     1100   011    112222 3445667799999999985


Q ss_pred             CC-----------------chhHHHHHHHHHHhCCcc--eeec-cC---CCCCCccC---CccCCCCcchHH-HHHHHHH
Q 039623           84 GQ-----------------IPEQAKIIAAVKEAGNVK--RFLP-SE---FGNDVDRS---QNVVEPAKSAYA-DKIKIRR  136 (292)
Q Consensus        84 ~~-----------------~~~~~~l~~a~~~~~~~~--~~i~-s~---~g~~~~~~---~~~~~~~~~~~~-~K~~~e~  136 (292)
                      ..                 +.++++++++|++++ ++  .+++ |+   ||......   +.+..+ .+++. .+...|+
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~-~~~~~~~~~~~e~  145 (292)
T TIGR01777        68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEEDSPAG-DDFLAELCRDWEE  145 (292)
T ss_pred             CcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcccCCCC-CChHHHHHHHHHH
Confidence            31                 556899999999998 63  4554 32   55432111   222222 33444 5555555


Q ss_pred             HHH---HcCccEEEEecceeccccccccccC--CCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEE
Q 039623          137 AIE---AEGIQYTYVSCNCFAGYFLPTLAQI--GAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLY  211 (292)
Q Consensus       137 ~~~---~~~~~~~~ir~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  211 (292)
                      .+.   +.+++++++||+.++|.........  ........   .++++++.++++|++|+|+++..+++++.. +++|+
T Consensus       146 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~  221 (292)
T TIGR01777       146 AAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGG---PLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN  221 (292)
T ss_pred             HhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCccc---ccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence            543   3579999999999988632111100  00001111   256788899999999999999999987543 46888


Q ss_pred             EcCCCccccHHHHHHHHHHHhCCCcceeecCHHHHHHH
Q 039623          212 IRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKD  249 (292)
Q Consensus       212 ~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (292)
                      +++++ .+|++|+++.+.+.+|.+.. ..+|.+.+...
T Consensus       222 ~~~~~-~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~  257 (292)
T TIGR01777       222 ATAPE-PVRNKEFAKALARALHRPAF-FPVPAFVLRAL  257 (292)
T ss_pred             ecCCC-ccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHH
Confidence            87655 99999999999999997654 34676655443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.91  E-value=1.1e-22  Score=172.52  Aligned_cols=238  Identities=18%  Similarity=0.211  Sum_probs=169.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      .+++||||+||+|++|+++|++++  .+|++++..+... ....+... +....++++.+|+.|..++.+++.++ .|+|
T Consensus         5 ~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~-~~~~e~~~-~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    5 LSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS-NLPAELTG-FRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             CEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc-ccchhhhc-ccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            479999999999999999999998  8999999885422 11111100 12567999999999999999999999 7777


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-cCC----CC-C--CccC--CccCCCCcchHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SEF----GN-D--VDRS--QNVVEPAKSAYADKIKI  134 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~~----g~-~--~~~~--~~~~~~~~~~~~~K~~~  134 (292)
                      ||+...               +.++.+++++|.+.+ ++++|+ |+.    +. .  ..++  +.|......|..||+.+
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~a  160 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALA  160 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHH
Confidence            776543               789999999999999 999998 442    21 1  1111  22211223444599999


Q ss_pred             HHHHHHcC----ccEEEEecceeccccccccccCCCC-CCCCCceeecCCCcceEEeeccchHHHHHHHhhc-----CCc
Q 039623          135 RRAIEAEG----IQYTYVSCNCFAGYFLPTLAQIGAP-APPREKVTIFGDGNAGAVYNKEDDIATYTINSID-----GPR  204 (292)
Q Consensus       135 e~~~~~~~----~~~~~ir~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~-----~~~  204 (292)
                      |+++.+.+    +..+.+||+.++|+..+........ ...+......++++...++++++.++.+.+.+..     .+.
T Consensus       161 E~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~  240 (361)
T KOG1430|consen  161 EKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS  240 (361)
T ss_pred             HHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence            99998643    7799999999998865544332211 1344445667777888999999999888777553     344


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhCCCcc-eeecCHH
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE-KTYVAEE  244 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~-~~~~~~~  244 (292)
                      ..|+.|++.... +...-++...+.+.+|...+ ...+|..
T Consensus       241 ~~Gq~yfI~d~~-p~~~~~~~~~l~~~lg~~~~~~~~~p~~  280 (361)
T KOG1430|consen  241 VNGQFYFITDDT-PVRFFDFLSPLVKALGYCLPSSIKLPLF  280 (361)
T ss_pred             cCceEEEEeCCC-cchhhHHHHHHHHhcCCCCCceeecchH
Confidence            568888888555 66666666688889998777 4445544

>PLN02778 3,5-epimerase/4-reductase

Probab=99.90  E-value=9.3e-23  Score=173.72  Aligned_cols=196  Identities=15%  Similarity=0.126  Sum_probs=137.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      ||||||||+||||++|++.|+++|++|+...+                          |+.|.+.+...++  ++|+|||
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~ViH   63 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTHVFN   63 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCEEEE
Confidence            68999999999999999999999999875322                          2334445555555  6999999


Q ss_pred             cCcCCC------------------chhHHHHHHHHHHhCCcceeecc---CCCCC----------CccCCccCCCC-cch
Q 039623           80 TVSRGQ------------------IPEQAKIIAAVKEAGNVKRFLPS---EFGND----------VDRSQNVVEPA-KSA  127 (292)
Q Consensus        80 ~a~~~~------------------~~~~~~l~~a~~~~~~~~~~i~s---~~g~~----------~~~~~~~~~~~-~~~  127 (292)
                      +|+...                  +.++.+++++|++.+ ++++++|   .|+..          ..+ +.++.+. +.|
T Consensus        64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~~vy~~~~~~p~~~~~~~~E-e~~p~~~~s~Y  141 (298)
T PLN02778         64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATGCIFEYDDAHPLGSGIGFKE-EDTPNFTGSFY  141 (298)
T ss_pred             CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecceEeCCCCCCCcccCCCCCc-CCCCCCCCCch
Confidence            998641                  568999999999998 8877763   24421          111 2333333 455


Q ss_pred             HHHHHHHHHHHHHcCccEEEEecceecccc--c-cccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          128 YADKIKIRRAIEAEGIQYTYVSCNCFAGYF--L-PTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       128 ~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      ..+|.++|+++..+. +..++|+.+..+..  . ..+....   ..+.++...+     .+++|++|++++++.+++...
T Consensus       142 g~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~---~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~  212 (298)
T PLN02778        142 SKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKI---TRYEKVVNIP-----NSMTILDELLPISIEMAKRNL  212 (298)
T ss_pred             HHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHH---HcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC
Confidence            569999999998754 55677876543321  1 1222211   2333333332     268999999999999997643


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                        +++||+++++ .+|++|+++.+.+.++.+.+
T Consensus       213 --~g~yNigs~~-~iS~~el~~~i~~~~~~~~~  242 (298)
T PLN02778        213 --TGIYNFTNPG-VVSHNEILEMYRDYIDPSFT  242 (298)
T ss_pred             --CCeEEeCCCC-cccHHHHHHHHHHHhCCCce
Confidence              3689986555 99999999999999997644

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.90  E-value=1.2e-22  Score=177.99  Aligned_cols=217  Identities=18%  Similarity=0.281  Sum_probs=172.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi   78 (292)
                      |+||||||+|-||+.+++++++.+ .+++.++|+..+.+.-..+..+.+....+.++.||+.|.+.+..++++  +|+||
T Consensus       251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            689999999999999999999987 678889998432211111111112236789999999999999999997  99999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHc-
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAE-  141 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~-  141 (292)
                      |+|+.-+               +.++.+++++|.+++ ++++|. |+        +...+|.+-++.||..+|+++... 
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iST--------DKAV~PtNvmGaTKr~aE~~~~a~~  401 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLIST--------DKAVNPTNVMGATKRLAEKLFQAAN  401 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEec--------CcccCCchHhhHHHHHHHHHHHHHh
Confidence            9999866               789999999999999 999997 65        667778888889999999998752 


Q ss_pred             ------CccEEEEecceeccc---cccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEE
Q 039623          142 ------GIQYTYVSCNCFAGY---FLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI  212 (292)
Q Consensus       142 ------~~~~~~ir~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  212 (292)
                            +..++.+|.|.+.|.   ..|-+.+..   .++++++ ..+.+.++-|+++.|.++.++.+....+  ++..++
T Consensus       402 ~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI---~~GgplT-vTdp~mtRyfMTI~EAv~LVlqA~a~~~--gGeifv  475 (588)
T COG1086         402 RNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQI---AEGGPLT-VTDPDMTRFFMTIPEAVQLVLQAGAIAK--GGEIFV  475 (588)
T ss_pred             hccCCCCcEEEEEEecceecCCCCCHHHHHHHH---HcCCCcc-ccCCCceeEEEEHHHHHHHHHHHHhhcC--CCcEEE
Confidence                  367899999999875   345554442   4455554 5567889999999999999999998753  444555


Q ss_pred             cCCCccccHHHHHHHHHHHhC
Q 039623          213 RPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       213 ~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      ...+++++..|+++.|.+..|
T Consensus       476 ldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         476 LDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             EcCCCCeEHHHHHHHHHHHhC
Confidence            556679999999999999987

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.90  E-value=2.2e-23  Score=172.00  Aligned_cols=211  Identities=18%  Similarity=0.270  Sum_probs=149.3

Q ss_pred             EEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhh-h----hcCCcE----EEECCCCCHHHHHHHHc-
Q 039623            4 TLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEI-F----KNLGVN----VLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~----~~~~v~----~v~~D~~d~~~~~~~~~-   72 (292)
                      ||||||+|.||+.|+++|++.+ .++++++|+     ..+.-.++. +    .+.++.    .+.+|+.|.+.+..+++ 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~-----E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRD-----ENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES------HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCC-----hhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh
Confidence            7999999999999999999998 689999998     444322222 2    234454    45899999999999999 


Q ss_pred             -cCCEEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHH
Q 039623           73 -QVDVVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        73 -~~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e  135 (292)
                       ++|+|||+|+.-+               +.++++++++|.+++ ++++|. |+        +....|.+-+++||..+|
T Consensus        76 ~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~IST--------DKAv~PtnvmGatKrlaE  146 (293)
T PF02719_consen   76 YKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFIST--------DKAVNPTNVMGATKRLAE  146 (293)
T ss_dssp             -T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEE--------CGCSS--SHHHHHHHHHH
T ss_pred             cCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccc--------cccCCCCcHHHHHHHHHH
Confidence             8999999999877               789999999999999 999998 54        555567778888999999


Q ss_pred             HHHHHc-------CccEEEEecceeccc---cccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          136 RAIEAE-------GIQYTYVSCNCFAGY---FLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       136 ~~~~~~-------~~~~~~ir~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      +++...       +.+++++|.|.|.+.   ..|.+....   ..++++++ .+.+..+-|+++++.++.++.++.... 
T Consensus       147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi---~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~-  221 (293)
T PF02719_consen  147 KLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQI---KNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAK-  221 (293)
T ss_dssp             HHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHH---HTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH---
T ss_pred             HHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHH---HcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCC-
Confidence            999863       357899999888763   455554442   34555554 445789999999999999999997653 


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                      .|+ .++...+++++..|+++.+.+..|.
T Consensus       222 ~ge-ifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  222 GGE-IFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             TTE-EEEE---TCEECCCHHHHHHHHTT-
T ss_pred             CCc-EEEecCCCCcCHHHHHHHHHhhccc
Confidence            344 4454565699999999999999874

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.89  E-value=1.8e-21  Score=177.32  Aligned_cols=230  Identities=15%  Similarity=0.183  Sum_probs=158.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC---CEEEEecCCCCCCCcchhhH-hhh--------------------hcCCcEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH---PTFALVRESTASDPVKGKLI-EIF--------------------KNLGVNVL   57 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-~~~--------------------~~~~v~~v   57 (292)
                      ++|||||||||+|.+|++.|++.+.   +|+++.|.....  ...+.+ +.+                    ...++..+
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~--~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKE--AAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCch--hHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            5899999999999999999998764   679999974322  111111 011                    02468999


Q ss_pred             ECCCCCH------HHHHHHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc
Q 039623           58 YGDLQDH------ESLIKAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD  115 (292)
Q Consensus        58 ~~D~~d~------~~~~~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~  115 (292)
                      .+|++++      +....+.+++|+|||+|+...            +.++.+++++|++.+.++++++ |   +||...+
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G  277 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG  277 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence            9999986      456666678999999999755            7789999999988754788887 3   2444321


Q ss_pred             cC-CccC-----------------------------------------------------------CCCcchHH-HHHHH
Q 039623          116 RS-QNVV-----------------------------------------------------------EPAKSAYA-DKIKI  134 (292)
Q Consensus       116 ~~-~~~~-----------------------------------------------------------~~~~~~~~-~K~~~  134 (292)
                      .. +.+.                                                           .+..+.|. +|..+
T Consensus       278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA  357 (605)
T PLN02503        278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG  357 (605)
T ss_pred             eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence            10 0000                                                           11225566 99999


Q ss_pred             HHHHHHc--CccEEEEecceeccc-------cccc--cccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          135 RRAIEAE--GIQYTYVSCNCFAGY-------FLPT--LAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       135 e~~~~~~--~~~~~~ir~~~~~~~-------~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      |+++.+.  ++|++|+||++|.+.       +.++  ...........+.+. .+++++...|+|+++.++++++.++..
T Consensus       358 E~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~  437 (605)
T PLN02503        358 EMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAK  437 (605)
T ss_pred             HHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHh
Confidence            9999864  799999999999542       2222  111111112233333 667888999999999999999998432


Q ss_pred             -C---cCCCceEEEcCC-CccccHHHHHHHHHHHhC
Q 039623          203 -P---RTLNKTLYIRPP-GNVYSFNELVTLWENKIG  233 (292)
Q Consensus       203 -~---~~~~~~~~~~~~-~~~~t~~e~~~~~~~~~~  233 (292)
                       .   ...+.+||++.+ ..++++.++.+.+.+...
T Consensus       438 ~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~  473 (605)
T PLN02503        438 HGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK  473 (605)
T ss_pred             hhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence             1   123678998744 359999999999987654

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.88  E-value=1.8e-21  Score=174.34  Aligned_cols=214  Identities=16%  Similarity=0.166  Sum_probs=150.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-----------cCCcEEEECCCCCHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-----------NLGVNVLYGDLQDHESLIK   69 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-----------~~~v~~v~~D~~d~~~~~~   69 (292)
                      ++|+||||+|+||++++++|++.|++|++++|+     .++.+.+.. +.           ..+++++.+|+.|.+++.+
T Consensus        81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn-----~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-----AQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            469999999999999999999999999999998     444432221 10           1358899999999999999


Q ss_pred             HHccCCEEEEcCcCCC-------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccC-CccCCCCcchHHHHHHH
Q 039623           70 AIKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRS-QNVVEPAKSAYADKIKI  134 (292)
Q Consensus        70 ~~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~-~~~~~~~~~~~~~K~~~  134 (292)
                      ++.++|+|||++|...             +.++.+++++|++.+ +++||+ |+.|...... .........++..|..+
T Consensus       156 aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~sk~~~~~~Kraa  234 (576)
T PLN03209        156 ALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKA  234 (576)
T ss_pred             HhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhhHHHHHHHHHHH
Confidence            9999999999998642             357899999999998 899987 6665431110 11111223355588899


Q ss_pred             HHHHHHcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc-CCCceEEEc
Q 039623          135 RRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR-TLNKTLYIR  213 (292)
Q Consensus       135 e~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~~~  213 (292)
                      |+.+...|++|++||||++.+......        ..+.+............+..+|+|++++.++.++. ..++++.+.
T Consensus       235 E~~L~~sGIrvTIVRPG~L~tp~d~~~--------~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi  306 (576)
T PLN03209        235 EEALIASGLPYTIVRPGGMERPTDAYK--------ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVI  306 (576)
T ss_pred             HHHHHHcCCCEEEEECCeecCCccccc--------cccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEE
Confidence            999999999999999998864421110        01111111111112235889999999999999764 567888887


Q ss_pred             CCCccccHHHHHHHHHH
Q 039623          214 PPGNVYSFNELVTLWEN  230 (292)
Q Consensus       214 ~~~~~~t~~e~~~~~~~  230 (292)
                      ... ......+.+.+.+
T Consensus       307 ~~~-~~p~~~~~~~~~~  322 (576)
T PLN03209        307 AET-TAPLTPMEELLAK  322 (576)
T ss_pred             eCC-CCCCCCHHHHHHh
Confidence            543 3344555555544

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.88  E-value=7.7e-21  Score=160.38  Aligned_cols=231  Identities=24%  Similarity=0.306  Sum_probs=176.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+||||||||++|++++++|+++|++|++++|+     +++...+.    .++++..+|+.++..+...+++.|.++++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~-----~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~   71 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRN-----PEAAAALA----GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS   71 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeC-----HHHHHhhc----CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence            689999999999999999999999999999999     55554333    789999999999999999999999999998


Q ss_pred             cCCC------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEeccee
Q 039623           82 SRGQ------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCF  153 (292)
Q Consensus        82 ~~~~------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~  153 (292)
                      +...      ......+++.+++.+ .++++++ |.++.....       ...|..+|..+|+.+.+.+++++++|++.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~-------~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~  144 (275)
T COG0702          72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS-------PSALARAKAAVEAALRSSGIPYTTLRRAAF  144 (275)
T ss_pred             cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC-------ccHHHHHHHHHHHHHHhcCCCeEEEecCee
Confidence            8431      233444444444433 2677776 677655433       457777999999999999999999995555


Q ss_pred             ccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          154 AGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      +.+....+....  ...+.+....+.+  ..+++..+|++.++...+..+...+++|.+.|+. ..+..+.++.+....|
T Consensus       145 ~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~-~~~~~~~~~~l~~~~g  219 (275)
T COG0702         145 YLGAGAAFIEAA--EAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATAGRTYELAGPE-ALTLAELASGLDYTIG  219 (275)
T ss_pred             eeccchhHHHHH--HhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCc-eecHHHHHHHHHHHhC
Confidence            544332211110  0222233333333  7899999999999999999887778999999885 9999999999999999


Q ss_pred             CCcceeecCHHHHHHHHHhC
Q 039623          234 KTLEKTYVAEEKLLKDIQDA  253 (292)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~  253 (292)
                      ++..+...+...........
T Consensus       220 r~~~~~~~~~~~~~~~~~~~  239 (275)
T COG0702         220 RPVGLIPEALAALTLALSGL  239 (275)
T ss_pred             CcceeeCCcHHHHHHHhccc
Confidence            99998777766666665543

>PRK12320 hypothetical protein; Provisional

Probab=99.88  E-value=2.7e-21  Score=178.17  Aligned_cols=193  Identities=15%  Similarity=0.153  Sum_probs=141.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ||||||||+||||++|++.|+++|++|++++|.+..           ....+++++.+|++|+. +.+++.++|+|||++
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-----------~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA   68 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-----------ALDPRVDYVCASLRNPV-LQELAGEADAVIHLA   68 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-----------cccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence            589999999999999999999999999999987321           11347899999999985 778888999999999


Q ss_pred             cCCC-------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecce
Q 039623           82 SRGQ-------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNC  152 (292)
Q Consensus        82 ~~~~-------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~  152 (292)
                      +...       +.++.+++++|++.+ ++ +|+ |+ +|..  .         .|    ...|.++...+++++++|+..
T Consensus        69 a~~~~~~~~vNv~Gt~nLleAA~~~G-vR-iV~~SS~~G~~--~---------~~----~~aE~ll~~~~~p~~ILR~~n  131 (699)
T PRK12320         69 PVDTSAPGGVGITGLAHVANAAARAG-AR-LLFVSQAAGRP--E---------LY----RQAETLVSTGWAPSLVIRIAP  131 (699)
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHcC-Ce-EEEEECCCCCC--c---------cc----cHHHHHHHhcCCCEEEEeCce
Confidence            8653       577999999999998 74 665 43 2211  0         11    147778877889999999988


Q ss_pred             eccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHH
Q 039623          153 FAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENK  231 (292)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~  231 (292)
                      ++|..........+...    +.... ..+...+||++|++++++.+++.+.  +++||+++++ .+|++|+++.+...
T Consensus       132 VYGp~~~~~~~r~I~~~----l~~~~-~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~-~~Si~el~~~i~~~  202 (699)
T PRK12320        132 PVGRQLDWMVCRTVATL----LRSKV-SARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPD-TTNVVTAWRLLRSV  202 (699)
T ss_pred             ecCCCCcccHhHHHHHH----HHHHH-cCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCC-eeEHHHHHHHHHHh
Confidence            88864321100000000    00000 1234556999999999999997643  4589998776 99999999988765

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=1.4e-20  Score=151.11  Aligned_cols=232  Identities=17%  Similarity=0.192  Sum_probs=168.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch--hhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG--KLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~   76 (292)
                      ||+.||||-||+-|++|++.|++.|+.|+++.|+++..+..+.  .......+.++.++.+|++|...+..+++  .+|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            3568999999999999999999999999999998776655543  11122345568999999999999999998  6999


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCc-ceeec-cC---CCCCCcc---CCccCCCCcchHHHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNV-KRFLP-SE---FGNDVDR---SQNVVEPAKSAYADKIK  133 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~-~~~i~-s~---~g~~~~~---~~~~~~~~~~~~~~K~~  133 (292)
                      |+|+++...               -.++.+++++++..+.. -+|+. |+   ||.....   +.+|..|.+||..+|.-
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            999999876               46899999999998721 24554 22   6643222   27788888888889987


Q ss_pred             HHHHHH----HcCccEEEEecceeccc--------cccccccCCCC--CCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          134 IRRAIE----AEGIQYTYVSCNCFAGY--------FLPTLAQIGAP--APPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       134 ~e~~~~----~~~~~~~~ir~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      +.....    ++|+-.   +.|+.+..        |...-+...+.  ......-..+|+.+..+||-|..|.++++...
T Consensus       162 a~W~tvNYResYgl~A---cnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlm  238 (345)
T COG1089         162 AYWITVNYRESYGLFA---CNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLM  238 (345)
T ss_pred             HHheeeehHhhcCcee---ecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHH
Confidence            665544    345422   23333322        22221111111  12222345678999999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcce
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEK  238 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  238 (292)
                      ++.++  ...|.+. ++...|.+|+++.-.+..|.++.+
T Consensus       239 LQq~~--PddyViA-Tg~t~sVrefv~~Af~~~g~~l~w  274 (345)
T COG1089         239 LQQEE--PDDYVIA-TGETHSVREFVELAFEMVGIDLEW  274 (345)
T ss_pred             HccCC--CCceEEe-cCceeeHHHHHHHHHHHcCceEEE
Confidence            99876  3456665 566999999999999999977664

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.4e-20  Score=155.50  Aligned_cols=218  Identities=20%  Similarity=0.188  Sum_probs=144.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      +++|||||+|+||+++++.|+++|++|++++|+     +++.+.+......++.++.+|++|.+++.++++       ++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRR-----PDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998     544444333334578999999999998877764       47


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |+|||++|...                   +.++.++++++    ++.+ .+++|+ |+++.....     ++...|..+
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~s  151 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAY-----PGFSLYHAT  151 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCC-----CCCchhHHH
Confidence            99999998643                   44566677775    5555 677776 555432221     223455559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCC-CCCCc---e-eecCCCcceEEeeccchHHHHHHH
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPA-PPREK---V-TIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~-~~~~~---~-~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |+.++.+++.       .+++++++||+.+...+........... .....   + .....+. ..-+.+++|++++++.
T Consensus       152 K~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~a~~~  230 (276)
T PRK06482        152 KWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS-FAIPGDPQKMVQAMIA  230 (276)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc-CCCCCCHHHHHHHHHH
Confidence            9999887763       4899999999988544322211100000 00000   0 0011111 1113678999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      ++..+.. +..|++ |.+...+..|+++.+.+.++
T Consensus       231 ~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        231 SADQTPA-PRRLTL-GSDAYASIRAALSERLAALE  263 (276)
T ss_pred             HHcCCCC-CeEEec-ChHHHHHHHHHHHHHHHHHH
Confidence            9986543 344555 55557788888777776654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.84  E-value=1.8e-19  Score=135.82  Aligned_cols=192  Identities=24%  Similarity=0.313  Sum_probs=140.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||.|+||||.+|+.++++.+++||+|++++|+     ++|...+     +++.+++.|+.|++++.+.+.+.|+||...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn-----~~K~~~~-----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~   70 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRN-----ASKLAAR-----QGVTILQKDIFDLTSLASDLAGHDAVISAF   70 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeC-----hHhcccc-----ccceeecccccChhhhHhhhcCCceEEEec
Confidence            799999999999999999999999999999999     4444321     578999999999999999999999999988


Q ss_pred             cCCC-------chhHHHHHHHHHHhCCcceeec-cCCCC---CC-ccC-CccCCCCcchHH-HHHHHH--HHHHH-cCcc
Q 039623           82 SRGQ-------IPEQAKIIAAVKEAGNVKRFLP-SEFGN---DV-DRS-QNVVEPAKSAYA-DKIKIR--RAIEA-EGIQ  144 (292)
Q Consensus        82 ~~~~-------~~~~~~l~~a~~~~~~~~~~i~-s~~g~---~~-~~~-~~~~~~~~~~~~-~K~~~e--~~~~~-~~~~  144 (292)
                      +...       ......+++..+..+ +.|++. ...|.   ++ ... +.|.- +..|+. ++...|  +.++. ..++
T Consensus        71 ~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~f-P~ey~~~A~~~ae~L~~Lr~~~~l~  148 (211)
T COG2910          71 GAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDF-PAEYKPEALAQAEFLDSLRAEKSLD  148 (211)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCC-chhHHHHHHHHHHHHHHHhhccCcc
Confidence            7763       556777888888888 777764 22221   11 111 33333 356777 676666  44543 4699


Q ss_pred             EEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEE
Q 039623          145 YTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI  212 (292)
Q Consensus       145 ~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  212 (292)
                      ||++.|..++.+.- .....   .+.+..+..-..|+   +.|+.+|.|-+++..++++...++.+-+
T Consensus       149 WTfvSPaa~f~PGe-rTg~y---rlggD~ll~n~~G~---SrIS~aDYAiA~lDe~E~~~h~rqRftv  209 (211)
T COG2910         149 WTFVSPAAFFEPGE-RTGNY---RLGGDQLLVNAKGE---SRISYADYAIAVLDELEKPQHIRQRFTV  209 (211)
T ss_pred             eEEeCcHHhcCCcc-ccCce---EeccceEEEcCCCc---eeeeHHHHHHHHHHHHhcccccceeeee
Confidence            99999988886632 11111   02233333333333   7899999999999999999887776655

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.3e-19  Score=153.04  Aligned_cols=218  Identities=15%  Similarity=0.136  Sum_probs=141.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+.......+.++.+|++|.+++.++++       .+
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARD-----TATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            569999999999999999999999999999998     444433333334568889999999988877664       57


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |+||||+|...                   +.+    .+.+++.+++.+ .+++|+ |+.+.....     .....|..+
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~~~~~Y~~s  152 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAF-----PMSGIYHAS  152 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCC-----CCccHHHHH
Confidence            99999999753                   233    344444456666 677776 443322221     122345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEe-eccchHHHHHHHhhc
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVY-NKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-i~v~D~a~~~~~~l~  201 (292)
                      |+.++.+.+.       .|++++++||+.+.+................... ...........+ .+++|++++++.+++
T Consensus       153 Kaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~  232 (275)
T PRK08263        153 KWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVD  232 (275)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHc
Confidence            9998777653       5899999999988765432111100000000000 001111122345 789999999999999


Q ss_pred             CCcCCCceEEEcCCCccccHHHHHHHHHHH
Q 039623          202 GPRTLNKTLYIRPPGNVYSFNELVTLWENK  231 (292)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~  231 (292)
                      .+...++ |++.+....+++.++.+.+.+.
T Consensus       233 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        233 AENPPLR-LFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             CCCCCeE-EEeCchHHHHHHHHHHHHHHHH
Confidence            8765555 4443333478889988888764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.83  E-value=6.6e-20  Score=152.45  Aligned_cols=188  Identities=18%  Similarity=0.212  Sum_probs=105.5

Q ss_pred             EEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhH-hh------------hhcCCcEEEECCCCCH------
Q 039623            6 IIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLI-EI------------FKNLGVNVLYGDLQDH------   64 (292)
Q Consensus         6 ItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~------------~~~~~v~~v~~D~~d~------   64 (292)
                      |||||||+|++|+++|++.+.  +|+++.|..+..  +..+.+ +.            ....+++++.||++++      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~--~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~   78 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ--SALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSD   78 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH--HHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--H
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc--cchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCCh
Confidence            799999999999999999876  899999984321  111111 11            1267899999999964      


Q ss_pred             HHHHHHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cC-C--CCCCcc---------C--
Q 039623           65 ESLIKAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SE-F--GNDVDR---------S--  117 (292)
Q Consensus        65 ~~~~~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~-~--g~~~~~---------~--  117 (292)
                      +.+..+.+.+|+|||||+...            +.+++++++.|.+.. .++|++ |+ +  +.....         .  
T Consensus        79 ~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~  157 (249)
T PF07993_consen   79 EDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDD  157 (249)
T ss_dssp             HHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--E
T ss_pred             HHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCccccccccccccc
Confidence            667778789999999999876            889999999999766 557776 33 1  111100         0  


Q ss_pred             -CccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccccccccCC-------CCCCCCCcee-ecCCCcceE
Q 039623          118 -QNVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIG-------APAPPREKVT-IFGDGNAGA  184 (292)
Q Consensus       118 -~~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~  184 (292)
                       .......+.|..||+.+|+++++    .|++++++||+.+.|.-.+......       ......+.++ ..+..+...
T Consensus       158 ~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  237 (249)
T PF07993_consen  158 LDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARL  237 (249)
T ss_dssp             EE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT-
T ss_pred             chhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceE
Confidence             11112234455599999999985    3899999999999984222111100       0001112222 334444568


Q ss_pred             EeeccchHHHHH
Q 039623          185 VYNKEDDIATYT  196 (292)
Q Consensus       185 ~~i~v~D~a~~~  196 (292)
                      ++++|+.+|++|
T Consensus       238 d~vPVD~va~aI  249 (249)
T PF07993_consen  238 DLVPVDYVARAI  249 (249)
T ss_dssp             -EEEHHHHHHHH
T ss_pred             eEECHHHHHhhC
Confidence            999999999886

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=3.3e-19  Score=138.57  Aligned_cols=216  Identities=18%  Similarity=0.219  Sum_probs=158.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~   76 (292)
                      ||||||||++|.+|+++.+.+...|+  +-+++.-+                      -.+|+++.++.+++|+  ++..
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~ekPth   58 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESEKPTH   58 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhccCCce
Confidence            79999999999999999999999886  44444333                      1679999999999997  6999


Q ss_pred             EEEcCcCCC----------------chhHHHHHHHHHHhCCcceeec--c--------CCCCCCccC-CccCCCCcchHH
Q 039623           77 VISTVSRGQ----------------IPEQAKIIAAVKEAGNVKRFLP--S--------EFGNDVDRS-QNVVEPAKSAYA  129 (292)
Q Consensus        77 vi~~a~~~~----------------~~~~~~l~~a~~~~~~~~~~i~--s--------~~g~~~~~~-~~~~~~~~~~~~  129 (292)
                      |||+|+...                ++..-+++..|-+.| ++++++  |        +|..++... ..|+.|.+..|+
T Consensus        59 VIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYs  137 (315)
T KOG1431|consen   59 VIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYS  137 (315)
T ss_pred             eeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHH
Confidence            999998765                567789999999999 888876  2        333333322 667777777788


Q ss_pred             -HHHHH----HHHHHHcCccEEEEecceeccccc----------cccccCCC--CCCCCCceeecCCCcceEEeeccchH
Q 039623          130 -DKIKI----RRAIEAEGIQYTYVSCNCFAGYFL----------PTLAQIGA--PAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       130 -~K~~~----e~~~~~~~~~~~~ir~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                       +|.++    ..+..+.|-.++.+-|..++|+..          |.+++...  ..-....+.++|.|...+.|+|++|+
T Consensus       138 yAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DL  217 (315)
T KOG1431|consen  138 YAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDL  217 (315)
T ss_pred             HHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHH
Confidence             88654    334456788888888766666422          22222110  11233368999999999999999999


Q ss_pred             HHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          193 ATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      |+++++++.+-+....+.--.|..+.+|.+|+++.+.++.+...+..
T Consensus       218 A~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~  264 (315)
T KOG1431|consen  218 ADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV  264 (315)
T ss_pred             HHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEE
Confidence            99999999875433333333344559999999999999998655543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.83  E-value=3.2e-19  Score=168.19  Aligned_cols=206  Identities=16%  Similarity=0.135  Sum_probs=140.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      ||||||||+||||++|++.|.++|++|..   .                       .+|++|.+.+...+.  ++|+|||
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~---~-----------------------~~~l~d~~~v~~~i~~~~pd~Vih  434 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY---G-----------------------KGRLEDRSSLLADIRNVKPTHVFN  434 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEe---e-----------------------ccccccHHHHHHHHHhhCCCEEEE
Confidence            78999999999999999999999988731   1                       235677788877776  7999999


Q ss_pred             cCcCCC------------------chhHHHHHHHHHHhCCcceeeccC---CCCC---------CccCCccCCCC-cchH
Q 039623           80 TVSRGQ------------------IPEQAKIIAAVKEAGNVKRFLPSE---FGND---------VDRSQNVVEPA-KSAY  128 (292)
Q Consensus        80 ~a~~~~------------------~~~~~~l~~a~~~~~~~~~~i~s~---~g~~---------~~~~~~~~~~~-~~~~  128 (292)
                      ||+...                  +.++.+++++|++.+ ++++++|+   |+..         ...++.++.|. +.|.
T Consensus       435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg  513 (668)
T PLN02260        435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYS  513 (668)
T ss_pred             CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhh
Confidence            998641                  668999999999998 88776633   4321         11113333343 5566


Q ss_pred             HHHHHHHHHHHHcCccEEEEecceecccc---ccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          129 ADKIKIRRAIEAEGIQYTYVSCNCFAGYF---LPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       129 ~~K~~~e~~~~~~~~~~~~ir~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      .+|.++|+++... .++.++|+.++++..   ..++....   ++.......+     .+..+++|++.+++.+++... 
T Consensus       514 ~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~---~~~~~~~~vp-----~~~~~~~~~~~~~~~l~~~~~-  583 (668)
T PLN02260        514 KTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKI---SRYNKVVNIP-----NSMTVLDELLPISIEMAKRNL-  583 (668)
T ss_pred             HHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHH---hccceeeccC-----CCceehhhHHHHHHHHHHhCC-
Confidence            6999999999876 356677766665422   11222221   1111211111     235677888888888887432 


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHH
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKL  246 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~  246 (292)
                       +++||+++++ .+|+.|+++.+.+.++....+..++.+++
T Consensus       584 -~giyni~~~~-~~s~~e~a~~i~~~~~~~~~~~~~~~~~~  622 (668)
T PLN02260        584 -RGIWNFTNPG-VVSHNEILEMYKDYIDPGFKWSNFTLEEQ  622 (668)
T ss_pred             -CceEEecCCC-cCcHHHHHHHHHHhcCCcccccccCHHHh
Confidence             5799998877 89999999999998753332455555554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.82  E-value=5.9e-19  Score=179.04  Aligned_cols=244  Identities=16%  Similarity=0.146  Sum_probs=165.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC----CCEEEEecCCCCCCCcchhhHhh-h---------hcCCcEEEECCCC-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG----HPTFALVRESTASDPVKGKLIEI-F---------KNLGVNVLYGDLQ-----   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~-~---------~~~~v~~v~~D~~-----   62 (292)
                      ++|+|||||||+|+++++.|++++    ++|+++.|+....  +..+.+.. .         ...+++++.+|++     
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE--AGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH--HHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            579999999999999999999887    7899999974321  11111111 0         0236899999997     


Q ss_pred             -CHHHHHHHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cC---CCCCC-----------
Q 039623           63 -DHESLIKAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDV-----------  114 (292)
Q Consensus        63 -d~~~~~~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~-----------  114 (292)
                       +.+.+..+..++|+|||+|+...            +.++.+++++|++.+ ++++++ |+   |+...           
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~ 1128 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQA 1128 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhc
Confidence             45667777789999999998754            678999999999887 888877 33   43210           


Q ss_pred             -----ccC----CccCCCCcchHHHHHHHHHHHHH---cCccEEEEecceeccccccccccC-C-CC-CCC-CCceeecC
Q 039623          115 -----DRS----QNVVEPAKSAYADKIKIRRAIEA---EGIQYTYVSCNCFAGYFLPTLAQI-G-AP-APP-REKVTIFG  178 (292)
Q Consensus       115 -----~~~----~~~~~~~~~~~~~K~~~e~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~-~-~~-~~~-~~~~~~~~  178 (292)
                           .+.    .....+...|..+|+.+|+++..   .|++++++||+.++|......... . +. ... ......++
T Consensus      1129 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p 1208 (1389)
T TIGR03443      1129 GGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIP 1208 (1389)
T ss_pred             cCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcC
Confidence                 000    00111223455699999999875   489999999999987632211000 0 00 000 00122334


Q ss_pred             CCcceEEeeccchHHHHHHHhhcCCcC--CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHHHHHHHh
Q 039623          179 DGNAGAVYNKEDDIATYTINSIDGPRT--LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQD  252 (292)
Q Consensus       179 ~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (292)
                      +....+++++++|+|++++.++.++..  .+.+||+.++. .+++.++++.+.+ .|.+.  ..++..+|...+..
T Consensus      1209 ~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~l~~-~g~~~--~~~~~~~w~~~l~~ 1280 (1389)
T TIGR03443      1209 NINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP-RIRFNDFLGTLKT-YGYDV--EIVDYVHWRKSLER 1280 (1389)
T ss_pred             CCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC-CCcHHHHHHHHHH-hCCCC--CccCHHHHHHHHHH
Confidence            455678999999999999999876532  33578887555 8999999999976 46554  44777777776643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.82  E-value=9.7e-19  Score=146.23  Aligned_cols=200  Identities=13%  Similarity=0.089  Sum_probs=134.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|++|++++++|+++|++|++++|+     +++.+.+ ..+.  ..++..+.+|++|.+++.++++      
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLN-----DEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     3333222 2221  3568899999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|+|||+++...                       +...+.+++++++.+ .+++++ |+.......     .....|
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~-----~~~~~y  153 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGS-----AGKAAY  153 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCC-----CCcchh
Confidence             5899999998643                       223666777777777 788887 433222221     123455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-----eecCCCcceEEeeccchHHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-----TIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ..+|...+.+.+.       .+++++.+||+.+.+............ ..+...     ..+......+.+++++|+|++
T Consensus       154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  232 (258)
T PRK12429        154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAK-ERGISEEEVLEDVLLPLVPQKRFTTVEEIADY  232 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhcc-ccCCChHHHHHHHHhccCCccccCCHHHHHHH
Confidence            5599888776653       478899999999987654321111000 000000     112222334679999999999


Q ss_pred             HHHhhcCCc--CCCceEEEc
Q 039623          196 TINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~  213 (292)
                      +..++....  ..++.|++.
T Consensus       233 ~~~l~~~~~~~~~g~~~~~~  252 (258)
T PRK12429        233 ALFLASFAAKGVTGQAWVVD  252 (258)
T ss_pred             HHHHcCccccCccCCeEEeC
Confidence            999997643  235666665

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.82  E-value=6.6e-19  Score=146.98  Aligned_cols=202  Identities=14%  Similarity=0.138  Sum_probs=131.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |++||||||+|++|+++++.|+++|++|++++|+     +++.+.+...   ...++..+.+|+.|.+++.++++     
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG-----EAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE   75 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999998     4443333222   13468889999999997665553     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHH----HHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAK----IIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~----l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||+++...                   +.++..    +++.+++.+ ++++++ |+.+.....     .....
T Consensus        76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~-----~~~~~  149 (255)
T TIGR01963        76 FGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVAS-----PFKSA  149 (255)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCC-----CCCch
Confidence              5899999998643                   223333    444445666 788877 332211111     11234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCC--CCCCCce--eecCCCcceEEeeccchHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAP--APPREKV--TIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      |..+|..++.+++.       .+++++++||+.+.+............  .......  .....+...+++++++|+|++
T Consensus       150 y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  229 (255)
T TIGR01963       150 YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAET  229 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHH
Confidence            55599888777653       479999999999987643221111000  0000000  012234456789999999999


Q ss_pred             HHHhhcCCc--CCCceEEEc
Q 039623          196 TINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~  213 (292)
                      ++.++.+..  ..++.|++.
T Consensus       230 ~~~~~~~~~~~~~g~~~~~~  249 (255)
T TIGR01963       230 ALFLASDAAAGITGQAIVLD  249 (255)
T ss_pred             HHHHcCccccCccceEEEEc
Confidence            999998642  235666665

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.81  E-value=1.1e-18  Score=146.18  Aligned_cols=201  Identities=10%  Similarity=0.087  Sum_probs=133.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|+||+++++.|+++|++|++++|++     ++.+ ..+.+.  ...+.++.+|++|.+.+.++++      
T Consensus         8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQ-----DGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCh-----HHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5699999999999999999999999999999983     3322 122222  2347789999999998887765      


Q ss_pred             -cCCEEEEcCcCCC-------------------c----hhHHHHHHHH-HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------I----PEQAKIIAAV-KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~----~~~~~l~~a~-~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|+||||+|...                   +    ..++.+++++ ++.+ .+++++ |+.+.....     .+...
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~-----~~~~~  156 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEAS-----PLKSA  156 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCC-----CCCcc
Confidence             3899999998743                   2    2267778888 5555 788887 543322211     12345


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCC--CCCCC--ceeecCCCcceEEeeccchHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAP--APPRE--KVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      |..+|..++.+++.       .+++++++||+.+.+............  .....  ...++..+....++++++|++++
T Consensus       157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a  236 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQT  236 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            55699988877653       478999999999887643221111000  00000  00122334446789999999999


Q ss_pred             HHHhhcCCcC--CCceEEEc
Q 039623          196 TINSIDGPRT--LNKTLYIR  213 (292)
Q Consensus       196 ~~~~l~~~~~--~~~~~~~~  213 (292)
                      ++.++..+..  .++.|++.
T Consensus       237 ~~~l~~~~~~~~~g~~~~~~  256 (262)
T PRK13394        237 VLFLSSFPSAALTGQSFVVS  256 (262)
T ss_pred             HHHHcCccccCCcCCEEeeC
Confidence            9999986532  25556554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.81  E-value=1.8e-18  Score=145.49  Aligned_cols=153  Identities=17%  Similarity=0.209  Sum_probs=114.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH---------hhhhcCCcEEEECCCC------CHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI---------EIFKNLGVNVLYGDLQ------DHE   65 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~v~~v~~D~~------d~~   65 (292)
                      ++||+||||||+|++|+.+|+..- .+|++++|..+.. ..+.+..         ++.-..+++++.+|+.      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E-~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDE-AALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHH-HHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            579999999999999999999875 6999999985522 1111111         1233568999999999      567


Q ss_pred             HHHHHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCC---CCCcc-----C-------
Q 039623           66 SLIKAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFG---NDVDR-----S-------  117 (292)
Q Consensus        66 ~~~~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g---~~~~~-----~-------  117 (292)
                      .+..+.+.+|.|||+++...            +.++..+++.|.+.. .|.+++ |+.+   .....     .       
T Consensus        80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~  158 (382)
T COG3320          80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTR  158 (382)
T ss_pred             HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccccccccc
Confidence            88888889999999999765            899999999999876 676665 3321   11100     0       


Q ss_pred             CccCCCCcchHHHHHHHHHHHHH---cCccEEEEecceeccc
Q 039623          118 QNVVEPAKSAYADKIKIRRAIEA---EGIQYTYVSCNCFAGY  156 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~~---~~~~~~~ir~~~~~~~  156 (292)
                      .....+..+|..|||.+|.++++   .|++++|+|||.+.+.
T Consensus       159 ~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gd  200 (382)
T COG3320         159 NVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGD  200 (382)
T ss_pred             cccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeecc
Confidence            12222346677799999999986   5799999999999875

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=1.3e-18  Score=144.59  Aligned_cols=197  Identities=13%  Similarity=0.101  Sum_probs=131.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh--hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF--KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~--~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ||+|+||||||++|+++++.|+++|++|+++.|+...    ..+.+. ..  ...++.++.+|+.|.+++.++++     
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEE----AAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHH----HHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999887877321    111111 11  23568899999999998887764     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||++|...                   +.+..++++++    ++.+ .+++++ |+.+.....     .....
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~-----~~~~~  155 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGW-----PGRSN  155 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCC-----CCchH
Confidence              5799999998532                   23344444444    5666 778886 443332221     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+++.       .+++++++||+.+.++.........   .... ..    ......+++++|+++++..+
T Consensus       156 y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~-~~----~~~~~~~~~~~dva~~~~~~  227 (249)
T PRK12825        156 YAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA---REAK-DA----ETPLGRSGTPEDIARAVAFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh---HHhh-hc----cCCCCCCcCHHHHHHHHHHH
Confidence            55599887766642       5899999999999987644322111   0000 00    11122378999999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +.+..  ..|++|++.|.
T Consensus       228 ~~~~~~~~~g~~~~i~~g  245 (249)
T PRK12825        228 CSDASDYITGQVIEVTGG  245 (249)
T ss_pred             hCccccCcCCCEEEeCCC
Confidence            97653  35778888754

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=144.41  Aligned_cols=205  Identities=16%  Similarity=0.161  Sum_probs=135.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||++++++|+++|++|++++|+..    .+.+.+ ..+.  ..++.++.+|++|++++.++++      
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA----PRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCch----HhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            67999999999999999999999999999998732    112111 1121  3457889999999998877765      


Q ss_pred             -cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHHHHHH
Q 039623           73 -QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~  136 (292)
                       ++|+|||+++...             +.++.++++++.+.- ...++|+ |+.+........+.+....|..+|..+|.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~  162 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGED  162 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHH
Confidence             5899999997532             567888888888652 1236665 54332211101111113355569999999


Q ss_pred             HHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCce
Q 039623          137 AIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKT  209 (292)
Q Consensus       137 ~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  209 (292)
                      +++.       .++++++++|+.+.+.....+....    ..+...  ........+++++|+|++++.+++.+...+++
T Consensus       163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~  236 (248)
T PRK07806        163 ALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL----NPGAIE--ARREAAGKLYTVSEFAAEVARAVTAPVPSGHI  236 (248)
T ss_pred             HHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC----CHHHHH--HHHhhhcccCCHHHHHHHHHHHhhccccCccE
Confidence            8875       4688888888877665432221110    000000  00011236899999999999999976566888


Q ss_pred             EEEcCCC
Q 039623          210 LYIRPPG  216 (292)
Q Consensus       210 ~~~~~~~  216 (292)
                      |++.|+.
T Consensus       237 ~~i~~~~  243 (248)
T PRK07806        237 EYVGGAD  243 (248)
T ss_pred             EEecCcc
Confidence            8888765

>PRK06182 short chain dehydrogenase; Validated

Probab=99.81  E-value=1.9e-18  Score=145.82  Aligned_cols=187  Identities=16%  Similarity=0.189  Sum_probs=126.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||++++++|+++|++|++++|+     .++.+   .+...++.++.+|++|.+++.++++       ++
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~l~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARR-----VDKME---DLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHH---HHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998     44443   2334578999999999999888776       68


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc-hHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS-AYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~-~~~  129 (292)
                      |++||++|...                       +..++.+++.+++.+ ..++|+ |+.+.....      |... |..
T Consensus        76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~------~~~~~Y~~  148 (273)
T PRK06182         76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYT------PLGAWYHA  148 (273)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCC------CCccHhHH
Confidence            99999998643                       223567777777776 677776 554322221      2233 444


Q ss_pred             HHHHHHHHHH-------HcCccEEEEecceeccccccccccCCCCCCCCCce--------eecCCCcceEEeeccchHHH
Q 039623          130 DKIKIRRAIE-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV--------TIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       130 ~K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~v~D~a~  194 (292)
                      +|..++.+.+       ..++++++++||.+.+++.................        ..+........+.+.+|+|+
T Consensus       149 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~  228 (273)
T PRK06182        149 TKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIAD  228 (273)
T ss_pred             HHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHH
Confidence            9999988754       25899999999999876432211110000000000        00111112335678899999


Q ss_pred             HHHHhhcCC
Q 039623          195 YTINSIDGP  203 (292)
Q Consensus       195 ~~~~~l~~~  203 (292)
                      +++.++...
T Consensus       229 ~i~~~~~~~  237 (273)
T PRK06182        229 AISKAVTAR  237 (273)
T ss_pred             HHHHHHhCC
Confidence            999988764

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.3e-18  Score=143.31  Aligned_cols=213  Identities=12%  Similarity=0.161  Sum_probs=139.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.. +.+.    ..++.++.+|++|++++.++++    
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN-----PDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            679999999999999999999999999999997     3333221 2221    2467889999999998887776    


Q ss_pred             ---cCCEEEEcCcCCC--------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ--------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                         ++|++||++|...                    +.+...+++++.+    .+ ..++++ |+.......     .+.
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~~-----~~~  156 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNTH-----RWF  156 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCCC-----CCC
Confidence               5899999998531                    2344455554433    33 346665 443222111     223


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ..|..+|..++.+++.       .+++++.+||+.+.+........       .... ...........+++++|+|+++
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~  229 (276)
T PRK05875        157 GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-------SPELSADYRACTPLPRVGEVEDVANLA  229 (276)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-------CHHHHHHHHcCCCCCCCcCHHHHHHHH
Confidence            4566699999998874       36889999999886554322110       1010 0000111123467899999999


Q ss_pred             HHhhcCCcC--CCceEEEcCCCccc----cHHHHHHHHHHHhC
Q 039623          197 INSIDGPRT--LNKTLYIRPPGNVY----SFNELVTLWENKIG  233 (292)
Q Consensus       197 ~~~l~~~~~--~~~~~~~~~~~~~~----t~~e~~~~~~~~~~  233 (292)
                      ..++..+..  .++.+++.+.. .+    +..|+++.+.+..+
T Consensus       230 ~~l~~~~~~~~~g~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        230 MFLLSDAASWITGQVINVDGGH-MLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             HHHcCchhcCcCCCEEEECCCe-eccCCccHHHHHHHHhhHHH
Confidence            999987543  36778876543 54    77777777665443

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3e-18  Score=144.91  Aligned_cols=202  Identities=13%  Similarity=0.145  Sum_probs=130.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     +++.+.+......++..+.+|++|.+++.++++       .+
T Consensus         5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRS-----EAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC-----HHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998     555444333334468899999999998887776       48


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |+|||++|...                   +.++.+++++    +++.+ .+++|+ |+.+.....     ++...|..+
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~-----~~~~~Y~~s  153 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITM-----PGIGYYCGS  153 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCC-----CCcchhHHH
Confidence            99999999743                   3345555555    34444 567776 543322221     123455559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCC-c-eeecC---CCcceEEeeccchHHHHHHH
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPRE-K-VTIFG---DGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~---~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..++.+++.       .|++++++||+.+.+.+............... . .....   .......+..++|+|++++.
T Consensus       154 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  233 (277)
T PRK06180        154 KFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILA  233 (277)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHH
Confidence            9988887653       48999999999987654321111000000000 0 00000   00012245688999999999


Q ss_pred             hhcCCcCCCceEEEcCCC
Q 039623          199 SIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~  216 (292)
                      +++.+...  ..++.|+.
T Consensus       234 ~l~~~~~~--~~~~~g~~  249 (277)
T PRK06180        234 AVESDEPP--LHLLLGSD  249 (277)
T ss_pred             HHcCCCCC--eeEeccHH
Confidence            99876543  33555554

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.1e-18  Score=143.16  Aligned_cols=210  Identities=16%  Similarity=0.124  Sum_probs=139.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     +++.+.+ +.+.+.++..+.+|+.|.+++.+++.       +
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDID-----AAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            569999999999999999999999999999998     4443322 22233468899999999999887775       4


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|+|||++|...                   +.+...+++++    .+.+ .+++++ |+.......      ....|..
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------~~~~y~~  150 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAAL------GHPAYSA  150 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCC------CCcccHH
Confidence            899999998643                   23333444444    4445 567776 432211111      1224555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHHhhc
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      +|..++.+++.       .++++..++|+++.+........      ..... ..........++++++|++++++.++.
T Consensus       151 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~  224 (257)
T PRK07074        151 AKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA------ANPQVFEELKKWYPLQDFATPDDVANAVLFLAS  224 (257)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc------cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            99998887764       37899999999887654221100      00011 000112234678999999999999997


Q ss_pred             CC-cC-CCceEEEcCCCccccHHHHHHHHHH
Q 039623          202 GP-RT-LNKTLYIRPPGNVYSFNELVTLWEN  230 (292)
Q Consensus       202 ~~-~~-~~~~~~~~~~~~~~t~~e~~~~~~~  230 (292)
                      .. .. .|..+++. .+...+.+|+.+.+.+
T Consensus       225 ~~~~~~~g~~~~~~-~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        225 PAARAITGVCLPVD-GGLTAGNREMARTLTL  254 (257)
T ss_pred             chhcCcCCcEEEeC-CCcCcCChhhhhhhcc
Confidence            53 22 35555555 4558889999987754

>PRK06194 hypothetical protein; Provisional

Probab=99.78  E-value=2.2e-17  Score=140.34  Aligned_cols=201  Identities=8%  Similarity=-0.002  Sum_probs=129.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++||||||+|+||++++++|+++|++|++++|+     .++.+. .+.+.  ..++.++.+|++|.+++.++++      
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQ-----QDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            679999999999999999999999999999997     333322 22222  2357779999999999888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHH----HHHHHHHHhCCc------ceeec-cCCCCCCccCCccC
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQA----KIIAAVKEAGNV------KRFLP-SEFGNDVDRSQNVV  121 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~----~l~~a~~~~~~~------~~~i~-s~~g~~~~~~~~~~  121 (292)
                       .+|+|||+||...                   +.++.    .++..+.+.+ .      .++|+ |+.+.....     
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~~~~~g~iv~~sS~~~~~~~-----  155 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-EKDPAYEGHIVNTASMAGLLAP-----  155 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCCCCCCeEEEEeCChhhccCC-----
Confidence             4799999999743                   22233    3334455554 2      45665 433222111     


Q ss_pred             CCCcchHHHHHHHHHHHHH----cC-----ccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchH
Q 039623          122 EPAKSAYADKIKIRRAIEA----EG-----IQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       122 ~~~~~~~~~K~~~e~~~~~----~~-----~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                      .+...|..+|..++.+++.    .+     +++..+.|+++.......        ...++..+.+++.+.+++++++|.
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T PRK06194        156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS--------ERNRPADLANTAPPTRSQLIAQAM  227 (287)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc--------cccCchhcccCccccchhhHHHHH
Confidence            1234455599999888764    22     444455555443332111        223455666777788888888888


Q ss_pred             HHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcce
Q 039623          193 ATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEK  238 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  238 (292)
                      +..+....                 .++..|+++.+.+.+......
T Consensus       228 ~~~~~~~~-----------------~~s~~dva~~i~~~~~~~~~~  256 (287)
T PRK06194        228 SQKAVGSG-----------------KVTAEEVAQLVFDAIRAGRFY  256 (287)
T ss_pred             HHhhhhcc-----------------CCCHHHHHHHHHHHHHcCCeE
Confidence            77653211                 157888888888876543333

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=1.2e-17  Score=139.06  Aligned_cols=197  Identities=14%  Similarity=0.103  Sum_probs=128.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|++|++++++|+++|++|++++|+     +++.+.+.. +. ..++.++.+|+.|++++.++++       
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRN-----EEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999998     444332222 11 2457899999999999988775       


Q ss_pred             cCCEEEEcCcCCC--------------------c----hhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ--------------------I----PEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~--------------------~----~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      .+|+|||++|...                    +    ..++.+++.+++.+ .+++|+ |+.+.....     .+...|
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~y  154 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPR-----PGLGWY  154 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCC-----CCchHH
Confidence            4799999998632                    1    23455555555555 677776 554332222     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|...+.+++.       .+++++.++|+.+.+..........    .......+........+++++|+|.+++.++
T Consensus       155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  230 (251)
T PRK07231        155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP----TPENRAKFLATIPLGRLGTPEDIANAALFLA  230 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc----ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            4599888777653       3789999999999765433221110    0000000111122335689999999999999


Q ss_pred             cCCcC--CCceEEEc
Q 039623          201 DGPRT--LNKTLYIR  213 (292)
Q Consensus       201 ~~~~~--~~~~~~~~  213 (292)
                      ..+..  .|..+.+.
T Consensus       231 ~~~~~~~~g~~~~~~  245 (251)
T PRK07231        231 SDEASWITGVTLVVD  245 (251)
T ss_pred             CccccCCCCCeEEEC
Confidence            76532  24445554

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.77  E-value=1.3e-17  Score=138.77  Aligned_cols=195  Identities=15%  Similarity=0.098  Sum_probs=129.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+|+||||+|++|++++++|+++|++|++++|+.     ++.... +.+.  ..++.++.+|+.|.+++.+++.      
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICG-----DDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999983     332211 2222  2358899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCC-CccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGND-VDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~-~~~~~~~~~~~~~  126 (292)
                       ++|+|||+++...                   +.+...+++++    .+.+ .+++++ |+.+.. ...     .+...
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~-----~~~~~  155 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGY-----PGLAH  155 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCC-----CCccH
Confidence             6899999997643                   23344555555    4445 567776 443322 111     12234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+++.       .+++++++||+.+.++.........       .............+++++|+|+++..+
T Consensus       156 y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~l  228 (251)
T PRK12826        156 YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ-------WAEAIAAAIPLGRLGEPEDIAAAVLFL  228 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH-------HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            44499888777764       4789999999999876432211100       000011111112578999999999998


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +..+.  ..|+++++.|
T Consensus       229 ~~~~~~~~~g~~~~~~~  245 (251)
T PRK12826        229 ASDEARYITGQTLPVDG  245 (251)
T ss_pred             hCccccCcCCcEEEECC
Confidence            87643  2467777764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.77  E-value=7.3e-18  Score=140.95  Aligned_cols=203  Identities=12%  Similarity=0.139  Sum_probs=135.2

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QVD   75 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d   75 (292)
                      +++||||+|+||+++++.|+++|++|++++|+     .++.+.+.......+.++.+|++|.+++.++++       .+|
T Consensus         8 ~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          8 VALLTGAASGIGEAVAERYLAEGARVVIADIK-----PARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999998     444433333234568899999999998888775       489


Q ss_pred             EEEEcCcCCC-------------------chhHHHHHHHHHHhC----Ccceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           76 VVISTVSRGQ-------------------IPEQAKIIAAVKEAG----NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        76 ~vi~~a~~~~-------------------~~~~~~l~~a~~~~~----~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      ++||++|...                   +.++..+++++.+.-    .-.++|+ |+.+.....     .+...|..+|
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK  157 (257)
T PRK07067         83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE-----ALVSHYCATK  157 (257)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC-----CCCchhhhhH
Confidence            9999998642                   446667777765431    0135555 443322221     2334555599


Q ss_pred             HHHHHHHHH-------cCccEEEEecceeccccccccccCC--CCCC-CCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          132 IKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG--APAP-PREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       132 ~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      ..++.+.+.       .+++++.++|+.+.+..........  .... ........+.......+++++|+|+++..++.
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  237 (257)
T PRK07067        158 AAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS  237 (257)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhC
Confidence            998887763       5789999999999876432211000  0000 00111122333445678999999999999998


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      ...  ..|+++++.|.
T Consensus       238 ~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        238 ADADYIVAQTYNVDGG  253 (257)
T ss_pred             cccccccCcEEeecCC
Confidence            643  24678888653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.77  E-value=2.4e-17  Score=137.10  Aligned_cols=184  Identities=12%  Similarity=0.090  Sum_probs=124.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+|+||||||++|.++++.|+++|++|++++|+     +++.+.+......++.++.+|++|.+++.++++       ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998     555544433334578899999999988877764       68


Q ss_pred             CEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |+|||++|...                        +..++.++.++++.+ .++++. |+.+.....     .+...|..
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~~  149 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY-----AGGNVYGA  149 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCC-----CCCchhHH
Confidence            99999998631                        123556666666666 677776 443322111     12334555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceecccccccc-ccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTL-AQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      +|..++.+.+.       .++++.+++||.+.+...... ...     ..........   ...++..+|+|++++.++.
T Consensus       150 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~dvA~~~~~l~~  221 (248)
T PRK10538        150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-----DDGKAEKTYQ---NTVALTPEDVSEAVWWVAT  221 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC-----cHHHHHhhcc---ccCCCCHHHHHHHHHHHhc
Confidence            99998887763       468899999999964422110 000     0000000000   1134789999999999997


Q ss_pred             CCc
Q 039623          202 GPR  204 (292)
Q Consensus       202 ~~~  204 (292)
                      .+.
T Consensus       222 ~~~  224 (248)
T PRK10538        222 LPA  224 (248)
T ss_pred             CCC
Confidence            664

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.9e-17  Score=137.93  Aligned_cols=198  Identities=12%  Similarity=0.134  Sum_probs=128.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh-hcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF-KNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.. +.+ ...++.++.+|++|++++.++++       
T Consensus         6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRD-----AEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC-----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999998     3332221 111 13457899999999999888765       


Q ss_pred             cCCEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|+|||++|...                   +.    ..+.+++++++.+ .+++++ |+.+.....     .....|.
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~-----~~~~~Y~  154 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGG-----RGRAAYV  154 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCC-----CCccHHH
Confidence            6899999999643                   22    2345555666666 677776 443322221     1123444


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .+|...+.+++.       .+++++.+||+.+.+..........   ....... ..........+++++|++++++.++
T Consensus       155 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  231 (252)
T PRK06138        155 ASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARH---ADPEALREALRARHPMNRFGTAEEVAQAALFLA  231 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccc---cChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            599998887764       3799999999998776433221110   0000000 0110111223688999999999999


Q ss_pred             cCCcC--CCceEEEc
Q 039623          201 DGPRT--LNKTLYIR  213 (292)
Q Consensus       201 ~~~~~--~~~~~~~~  213 (292)
                      .++..  .|..+.+.
T Consensus       232 ~~~~~~~~g~~~~~~  246 (252)
T PRK06138        232 SDESSFATGTTLVVD  246 (252)
T ss_pred             CchhcCccCCEEEEC
Confidence            87532  24445444

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.7e-17  Score=137.95  Aligned_cols=217  Identities=13%  Similarity=0.060  Sum_probs=139.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||||.||+++++.|+++|++|++++|+     +++.+.+.... ..+.++.+|++|++++.++++       ++
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLD-----EALAKETAAEL-GLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh-ccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     55543322211 258899999999988766654       57


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                       +..++.++..+++.+ ..+++. |+.+.....     .....|..+
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  153 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPV-----PGMATYCAS  153 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCC-----CCCcchHHH
Confidence            99999999643                       223455666666666 677776 544322221     123455569


Q ss_pred             HHHHHHHHH-------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIE-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+       ..|+++++++|+.+.+.......                 ......+++++|+|+.++.++.++
T Consensus       154 Kaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~-----------------~~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        154 KHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG-----------------GAKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc-----------------cccCCCCCCHHHHHHHHHHHHhCC
Confidence            988776544       35899999999988655321110                 011224578999999999999876


Q ss_pred             cCCCceEEEcCC---CccccHHHHHHHHHHHhCCCcceeecCHHHHH
Q 039623          204 RTLNKTLYIRPP---GNVYSFNELVTLWENKIGKTLEKTYVAEEKLL  247 (292)
Q Consensus       204 ~~~~~~~~~~~~---~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
                      +.........+.   -..+....+.+.+.+.++.+..+...+.+...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (273)
T PRK07825        217 RPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARA  263 (273)
T ss_pred             CCEEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccceeechhhHHHH
Confidence            431100000000   01233356666676666666555544444433

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.77  E-value=2.3e-17  Score=131.27  Aligned_cols=184  Identities=17%  Similarity=0.172  Sum_probs=133.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc-CCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN-LGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      .++|||||+.||.++++.|.++|++|++..|+     .++++.+..... ..+..+..|++|.+++.+++.       ++
T Consensus         8 v~lITGASSGiG~A~A~~l~~~G~~vvl~aRR-----~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           8 VALITGASSGIGEATARALAEAGAKVVLAARR-----EERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecc-----HHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            48999999999999999999999999999999     777766655544 468899999999988665553       69


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-c-CCCCCCccCCccCCCCcchH-
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-S-EFGNDVDRSQNVVEPAKSAY-  128 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s-~~g~~~~~~~~~~~~~~~~~-  128 (292)
                      |++||+||...                       +..++.++-.+.+++ ..++|. | ..|....       |..+.| 
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y-------~~~~vY~  154 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPY-------PGGAVYG  154 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccC-------CCCccch
Confidence            99999999865                       456777777777776 567775 4 4443333       244444 


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      ++|+.+..+.+.       .+++++.|-||.+.+..+......       +.-.-...-.....++..+|+|+++.++++
T Consensus       155 ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~-------g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~  227 (246)
T COG4221         155 ATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE-------GDDERADKVYKGGTALTPEDIAEAVLFAAT  227 (246)
T ss_pred             hhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC-------chhhhHHHHhccCCCCCHHHHHHHHHHHHh
Confidence            599999888653       578999999999976544332211       000001100112356899999999999999


Q ss_pred             CCcCC
Q 039623          202 GPRTL  206 (292)
Q Consensus       202 ~~~~~  206 (292)
                      .|...
T Consensus       228 ~P~~v  232 (246)
T COG4221         228 QPQHV  232 (246)
T ss_pred             CCCcc
Confidence            88653

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.3e-17  Score=139.34  Aligned_cols=191  Identities=18%  Similarity=0.151  Sum_probs=122.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc-cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK-QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-~~d~v   77 (292)
                      ++||||||||+||+++++.|+++|++|++++|+     +++.+.+...   ...++.++.+|++|++++.+++. ++|+|
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~v   77 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQI-----APQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVL   77 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEE
Confidence            579999999999999999999999999999997     3333222221   13468899999999999988887 89999


Q ss_pred             EEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHH
Q 039623           78 ISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        78 i~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~  133 (292)
                      |||+|...                       +...+.+++.+++.+ .+++|+ |+.+.....     .....|..+|..
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~-----~~~~~Y~~sK~a  151 (257)
T PRK09291         78 LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITG-----PFTGAYCASKHA  151 (257)
T ss_pred             EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCC-----CCcchhHHHHHH
Confidence            99998542                       123445566666666 678876 544322211     123345559999


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCC-CCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAP-PREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      ++.+.+.       .|++++++|||++..++............ .........+.......+..+|++..++.++..+
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCC
Confidence            8876542       58999999999987654322111000000 0000001111122234466777777777777554

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.5e-17  Score=134.48  Aligned_cols=187  Identities=13%  Similarity=0.042  Sum_probs=128.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhhhcCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFKNLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      ++||||||+|+||+++++.|+++|++|++++|++     ++. +.++.+...+.+.+.+|+.|.+++.++++       +
T Consensus         8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGA-----APLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh-----HhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999983     332 22334445678899999999988877765       5


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|+|||++|...                   +.++..+++++.    +.+ .+++++ |+.+.....     .+...|..
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~y~~  156 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAG-----PGMGAYAA  156 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCC-----CCcchhHH
Confidence            899999998532                   234455555553    445 678776 544322221     12334555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|...+.+++.       .++++..+||+.+.+.......              ..  .....+++++|+|+++..++.+
T Consensus       157 sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~--------------~~--~~~~~~~~~~dva~~~~~~l~~  220 (239)
T PRK12828        157 AKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM--------------PD--ADFSRWVTPEQIAAVIAFLLSD  220 (239)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC--------------Cc--hhhhcCCCHHHHHHHHHHHhCc
Confidence            99887776653       4799999999988876321110              00  1122378999999999999986


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      ..  ..++.+.+.|.
T Consensus       221 ~~~~~~g~~~~~~g~  235 (239)
T PRK12828        221 EAQAITGASIPVDGG  235 (239)
T ss_pred             ccccccceEEEecCC
Confidence            52  24666677653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=2.4e-17  Score=137.19  Aligned_cols=196  Identities=14%  Similarity=0.111  Sum_probs=127.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchhhH-hhh--hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|+++ .|+     .++.+.+ +.+  .+.++.++.+|++|++++.++++     
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARS-----RKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999998764 666     3332221 122  13468889999999998888775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||++|...                   +.++..+++++.    +.+ .+++|+ |+.+.....     .+...
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~-----~~~~~  153 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYL-----ENYTT  153 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCC-----CCccH
Confidence              4899999998643                   223444445444    344 568887 554432221     12345


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..+|..++.+++.       .+++++.++|+++.+.....+...       .... ..........+++.+|+|++++.
T Consensus       154 y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~  226 (250)
T PRK08063        154 VGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-------EELLEDARAKTPAGRMVEPEDVANAVLF  226 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-------hHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            55599999998764       578999999999876643221110       0000 00000111246889999999999


Q ss_pred             hhcCCc--CCCceEEEcCC
Q 039623          199 SIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++.  ..|+.+++.|.
T Consensus       227 ~~~~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        227 LCSPEADMIRGQTIIVDGG  245 (250)
T ss_pred             HcCchhcCccCCEEEECCC
Confidence            997643  24667777644

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.5e-17  Score=139.06  Aligned_cols=198  Identities=15%  Similarity=0.103  Sum_probs=125.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|.++|++|.+++|+     .++.+.+. .+.  ...+.++.+|++|.+++.++++      
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGFPVALGARR-----VEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999987     33332221 121  2357788999999999887775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||++|...                   +.++.++++++.    +.+ ..++++ |+.......     .+...|
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  159 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQR-----PHMGAY  159 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC-----CCcchH
Confidence             5799999998743                   334455555543    334 456776 443221111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+++.       .|++++++|||.+.+............ .........+ ......+++++|+|++++.++
T Consensus       160 ~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~dva~a~~~~~  237 (274)
T PRK07775        160 GAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIG-PMLEDWAKWG-QARHDYFLRASDLARAITFVA  237 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhh-HHHHHHHHhc-ccccccccCHHHHHHHHHHHh
Confidence            5599999988864       389999999987754321111000000 0000000111 222456899999999999999


Q ss_pred             cCCcCCCceEEEc
Q 039623          201 DGPRTLNKTLYIR  213 (292)
Q Consensus       201 ~~~~~~~~~~~~~  213 (292)
                      +++. .+.+|++.
T Consensus       238 ~~~~-~~~~~~~~  249 (274)
T PRK07775        238 ETPR-GAHVVNME  249 (274)
T ss_pred             cCCC-CCCeeEEe
Confidence            8754 34456654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.76  E-value=3.3e-17  Score=136.84  Aligned_cols=197  Identities=17%  Similarity=0.210  Sum_probs=129.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhc--CCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKN--LGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~--~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+..  ..+..+.+|++|.+++.++++      
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRD-----PAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998     3333222 22222  347889999999999888875      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|+|||++|...                   +.++..+++++.+    .+ .+++|+ |+......     ......|
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~-----~~~~~~y  159 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALA-----RPGIAPY  159 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccC-----CCCCccH
Confidence             4899999999743                   3345555555543    34 567776 44322211     1123445


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+++.       .|+++..+||+.+.+.........      ......+........+.+++|+|.+++.++
T Consensus       160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  233 (255)
T PRK07523        160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD------PEFSAWLEKRTPAGRWGKVEELVGACVFLA  233 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            5599998888763       579999999998877643221100      000000111112234678999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ..+.  ..|+.+++.|.
T Consensus       234 ~~~~~~~~G~~i~~~gg  250 (255)
T PRK07523        234 SDASSFVNGHVLYVDGG  250 (255)
T ss_pred             CchhcCccCcEEEECCC
Confidence            7642  23667777643

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.9e-17  Score=137.71  Aligned_cols=198  Identities=13%  Similarity=0.172  Sum_probs=125.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-h----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-K----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|++|+++++.|+++|++|++++|+     +++.+.+... .    +.++.++.+|++|++++.+ ++    
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~   77 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRN-----PEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK   77 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence            459999999999999999999999999999998     4433322221 1    2468899999999988765 42    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|+||||+|...                   +.++..++++    +++.+ ..++++ |+.+.....     .+..
T Consensus        78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~~~~  151 (280)
T PRK06914         78 EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGF-----PGLS  151 (280)
T ss_pred             hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCC-----CCCc
Confidence               5799999998643                   2233444444    56565 677776 443222221     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCC-CCcee-----ecCC-CcceEEeeccch
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPP-REKVT-----IFGD-GNAGAVYNKEDD  191 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~-~~~~~~~i~v~D  191 (292)
                      .|..+|..++.+++.       .+++++++|||.+.++.............. .....     +... ......+++++|
T Consensus       152 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  231 (280)
T PRK06914        152 PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPID  231 (280)
T ss_pred             hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHH
Confidence            555599998887764       489999999999887643211100000000 00000     0000 011245689999


Q ss_pred             HHHHHHHhhcCCcCCCceEEE
Q 039623          192 IATYTINSIDGPRTLNKTLYI  212 (292)
Q Consensus       192 ~a~~~~~~l~~~~~~~~~~~~  212 (292)
                      +|++++.++++++.. ..|++
T Consensus       232 va~~~~~~~~~~~~~-~~~~~  251 (280)
T PRK06914        232 VANLIVEIAESKRPK-LRYPI  251 (280)
T ss_pred             HHHHHHHHHcCCCCC-ccccc
Confidence            999999999987543 34444

>PRK09135 pteridine reductase; Provisional

Probab=99.75  E-value=3e-17  Score=136.43  Aligned_cols=198  Identities=14%  Similarity=0.089  Sum_probs=126.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH----hhhhcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI----EIFKNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++|+||||+|+||++++++|+++|++|++++|+..    .+.+.+    .......+.++.+|++|.+++.++++     
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSA----AEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999998732    122111    11112358899999999998888776     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                        ++|+|||++|...                   +.++.++++++.+.-  .-..++. ++...     ..+..+...|.
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Y~  157 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----ERPLKGYPVYC  157 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----cCCCCCchhHH
Confidence              4799999998521                   567778888876421  0123333 22111     22333455666


Q ss_pred             HHHHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          129 ADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       129 ~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      .+|..+|.+++.      .+++++.+||+.+.+..........   . .. . .. .......+.+++|+|+++..++..
T Consensus       158 ~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~---~-~~-~-~~-~~~~~~~~~~~~d~a~~~~~~~~~  230 (249)
T PRK09135        158 AAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEE---A-RQ-A-IL-ARTPLKRIGTPEDIAEAVRFLLAD  230 (249)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHH---H-HH-H-HH-hcCCcCCCcCHHHHHHHHHHHcCc
Confidence            699999988874      2588999999998876432110000   0 00 0 00 000111223579999999777654


Q ss_pred             C-cCCCceEEEcCC
Q 039623          203 P-RTLNKTLYIRPP  215 (292)
Q Consensus       203 ~-~~~~~~~~~~~~  215 (292)
                      . ...|++|++.+.
T Consensus       231 ~~~~~g~~~~i~~g  244 (249)
T PRK09135        231 ASFITGQILAVDGG  244 (249)
T ss_pred             cccccCcEEEECCC
Confidence            3 235677887643

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-16  Score=133.71  Aligned_cols=214  Identities=16%  Similarity=0.103  Sum_probs=134.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|.++|++|++.+|+     .++.+. .+.+.  ...+.++.+|++|.+++.++++      
T Consensus         7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          7 RGAVITGGASGIGLATGTEFARRGARVVLGDVD-----KPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            469999999999999999999999999999988     333322 22232  2347789999999998887765      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++..+++++    .+.+...++|. |+......     ..+...|
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----~~~~~~Y  156 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----NAGLGAY  156 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----CCCCchH
Confidence             4799999999642                   23444555554    34431245665 44322111     1223455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCC-CCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG-APAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..++.+.+.       .|+++++++|+.+.+.......... ............+......++++++|+|+.++..
T Consensus       157 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~a  236 (275)
T PRK05876        157 GVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADA  236 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHH
Confidence            5599986555442       4799999999998776543221110 0001111112233333456789999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHh
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKI  232 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~  232 (292)
                      +.++    +.+.+.  + .....++.+.+.+..
T Consensus       237 i~~~----~~~~~~--~-~~~~~~~~~~~~~~~  262 (275)
T PRK05876        237 ILAN----RLYVLP--H-AASRASIRRRFERID  262 (275)
T ss_pred             HHcC----CeEEec--C-hhhHHHHHHHHHHHH
Confidence            9764    234443  2 345566666655543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.75  E-value=6.5e-17  Score=132.54  Aligned_cols=185  Identities=17%  Similarity=0.151  Sum_probs=122.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |+++||||+|++|+++++.|+++ ++|++++|+     .++.+.+... ..+++++.+|++|++++.+++.   ++|.||
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRP-----AERLDELAAE-LPGATPFPVDLTDPEAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCC-----HHHHHHHHHH-hccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999 999999998     4443322221 2468899999999999998887   599999


Q ss_pred             EcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           79 STVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        79 ~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      |++|...                       +..++.+++++++.+  .++++ |+.......     .+...|..+|..+
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~-----~~~~~y~~~K~a~  149 (227)
T PRK08219         77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRAN-----PGWGSYAASKFAL  149 (227)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcC-----CCCchHHHHHHHH
Confidence            9998643                       122555566555544  45555 432221111     1234555599988


Q ss_pred             HHHHHH-----cC-ccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCc
Q 039623          135 RRAIEA-----EG-IQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNK  208 (292)
Q Consensus       135 e~~~~~-----~~-~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~  208 (292)
                      +.+++.     .+ +++..++|+.+.+........       . .    +.......+++++|++++++.+++.++ .+.
T Consensus       150 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-------~-~----~~~~~~~~~~~~~dva~~~~~~l~~~~-~~~  216 (227)
T PRK08219        150 RALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA-------Q-E----GGEYDPERYLRPETVAKAVRFAVDAPP-DAH  216 (227)
T ss_pred             HHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh-------h-h----ccccCCCCCCCHHHHHHHHHHHHcCCC-CCc
Confidence            877653     24 788888887665432211110       0 0    000112357999999999999998764 344


Q ss_pred             eEEEc
Q 039623          209 TLYIR  213 (292)
Q Consensus       209 ~~~~~  213 (292)
                      ++++.
T Consensus       217 ~~~~~  221 (227)
T PRK08219        217 ITEVV  221 (227)
T ss_pred             cceEE
Confidence            55543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.75  E-value=5.7e-17  Score=134.41  Aligned_cols=195  Identities=13%  Similarity=0.111  Sum_probs=127.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|++|.++++.|.++|++|++++|+     +++.+.+ ..+.  ...+.++.+|+.|++++.++++      
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSN-----EEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     3333222 2121  3457888999999988877765      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|.|||++|...                   +.+..++++++    .+.+ .+++++ |+.+.....     .+...|
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~-----~~~~~y  154 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGN-----PGQTNY  154 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCC-----CCCcHh
Confidence             3699999998743                   23445555555    4555 678876 443322221     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|...+.+.+.       .+++++++||+.+.+.....+....    ...    .........+++++|+++++..++
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~dva~~~~~~~  226 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEV----KAE----ILKEIPLGRLGQPEEVANAVAFLA  226 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHH----HHH----HHhcCCCCCCcCHHHHHHHHHHHc
Confidence            4599877666553       4789999999999776432211100    000    000011245678899999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..+..+++.|.
T Consensus       227 ~~~~~~~~g~~~~~~gg  243 (246)
T PRK05653        227 SDAASYITGQVIPVNGG  243 (246)
T ss_pred             CchhcCccCCEEEeCCC
Confidence            7532  34667777643

>PRK08017 oxidoreductase; Provisional

Probab=99.74  E-value=7.2e-17  Score=134.81  Aligned_cols=184  Identities=17%  Similarity=0.195  Sum_probs=125.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--------   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--------   72 (292)
                      |++|+||||+|+||.++++.|.++|++|++++|+     .++.+.+   ...+++.+.+|+.|.+++.++++        
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~-----~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRK-----PDDVARM---NSLGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHhHHH---HhCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            1479999999999999999999999999999998     4444332   23468899999999888766553        


Q ss_pred             cCCEEEEcCcCCC-------------------c----hhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-------------------I----PEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~----~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~  127 (292)
                      .+|.++|++|...                   +    ...+.+++++++.+ .+++++ |+ ++....      .....|
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------~~~~~Y  146 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIST------PGRGAY  146 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCC------CCccHH
Confidence            3689999998642                   1    12334577777776 677766 43 332211      123345


Q ss_pred             HHHHHHHHHHHH-------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIE-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+       ..++++++++||.+.+.+.......      .........+...+.+++++|+++++..++
T Consensus       147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~  220 (256)
T PRK08017        147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT------QSDKPVENPGIAARFTLGPEAVVPKLRHAL  220 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch------hhccchhhhHHHhhcCCCHHHHHHHHHHHH
Confidence            559999887654       3579999999988765543222110      001111222333456799999999999999


Q ss_pred             cCCcC
Q 039623          201 DGPRT  205 (292)
Q Consensus       201 ~~~~~  205 (292)
                      ++++.
T Consensus       221 ~~~~~  225 (256)
T PRK08017        221 ESPKP  225 (256)
T ss_pred             hCCCC
Confidence            87653

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.4e-16  Score=132.85  Aligned_cols=196  Identities=12%  Similarity=0.092  Sum_probs=126.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcch-hhHhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKG-KLIEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++|+||||+|+||++++++|+++|++|.++ .|+     .++. +..+.+.  ...+.++.+|++|++++.++++     
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRN-----KQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999875 465     3332 2222222  2357889999999999887766     


Q ss_pred             --------cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh-CCcceeec-cCCCCCCccCCccCCC
Q 039623           73 --------QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA-GNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 --------~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~-~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                              ++|+|||++|...                   +.++.++++++.+. ....++++ |+.......     .+
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~-----~~  156 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF-----TG  156 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-----CC
Confidence                    4899999998743                   44566666666543 11345665 443222111     12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ...|..+|..++.+++.       .++++++++|+.+.+........       .... ...........+++++|++++
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~  229 (254)
T PRK12746        157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD-------DPEIRNFATNSSVFGRIGQVEDIADA  229 (254)
T ss_pred             CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc-------ChhHHHHHHhcCCcCCCCCHHHHHHH
Confidence            34455599998887653       47899999999887654321110       0000 000011112355789999999


Q ss_pred             HHHhhcCCc--CCCceEEEcC
Q 039623          196 TINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +..++.++.  ..|++|++.+
T Consensus       230 ~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        230 VAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             HHHHcCcccCCcCCCEEEeCC
Confidence            999887643  2467777753

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.1e-16  Score=134.27  Aligned_cols=202  Identities=14%  Similarity=0.119  Sum_probs=128.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      +++|||||+|++|+++++.|+++|++|++++|+     .+..+.+.. ....++.++.+|++|++++.++++       +
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS-----EAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            579999999999999999999999999999997     333322222 222256889999999998877764       6


Q ss_pred             CCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCc-ceeec-cCCCCCCccCCccCCCCcch
Q 039623           74 VDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNV-KRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        74 ~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~-~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      +|+|||++|...                    +.++..+++++    +..+ . ++++. |+.......     .....|
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~-----~~~~~y  160 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGY-----PGRTPY  160 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCC-----CCCchh
Confidence            899999999761                    33445555554    4444 4 45555 443222121     122345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeec----CCCcceEEeeccchHHHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIF----GDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v~D~a~~~  196 (292)
                      ..+|...+.+++.       .+++++++||+.+.+............ ..+......    ........+++++|+|+++
T Consensus       161 ~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  239 (264)
T PRK12829        161 AASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQ-QLGIGLDEMEQEYLEKISLGRMVEPEDIAATA  239 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhh-ccCCChhHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            5599998888764       479999999999977643322111000 000000000    0001123579999999999


Q ss_pred             HHhhcCC--cCCCceEEEcCC
Q 039623          197 INSIDGP--RTLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~--~~~~~~~~~~~~  215 (292)
                      ..++...  ...++.|++.+.
T Consensus       240 ~~l~~~~~~~~~g~~~~i~~g  260 (264)
T PRK12829        240 LFLASPAARYITGQAISVDGN  260 (264)
T ss_pred             HHHcCccccCccCcEEEeCCC
Confidence            9988643  234667777653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.7e-16  Score=132.15  Aligned_cols=202  Identities=8%  Similarity=0.021  Sum_probs=127.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|+||++++++|+++|++|++..|+..   ......+..+.  ...+..+.+|+++++++.++++       
T Consensus         7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA---EEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCh---HHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999988776532   11111122222  2356788999999988877765       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      .+|+|||++|...                   +.+...+++++.+.- ...++|+ |+.....     +..+...|..+|
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y~~sK  158 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----PAYGLSIYGAMK  158 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----CCCCchHHHHHH
Confidence            5799999999622                   334555566655431 1245665 4322211     112344555599


Q ss_pred             HHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          132 IKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       132 ~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      ..++.+++.      .++.+..++|+++.+..........  ....+..  .........+++++|+|++++.++..+..
T Consensus       159 ~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~dva~~~~~~~~~~~~  234 (252)
T PRK06077        159 AAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVL--GMSEKEF--AEKFTLMGKILDPEEVAEFVAAILKIESI  234 (252)
T ss_pred             HHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcc--cccHHHH--HHhcCcCCCCCCHHHHHHHHHHHhCcccc
Confidence            998888774      2678888899988665322211100  0000000  01111123679999999999999986655


Q ss_pred             CCceEEEcCC
Q 039623          206 LNKTLYIRPP  215 (292)
Q Consensus       206 ~~~~~~~~~~  215 (292)
                      .+++|++.+.
T Consensus       235 ~g~~~~i~~g  244 (252)
T PRK06077        235 TGQVFVLDSG  244 (252)
T ss_pred             CCCeEEecCC
Confidence            5778888754

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.73  E-value=1.7e-16  Score=129.91  Aligned_cols=179  Identities=18%  Similarity=0.224  Sum_probs=131.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-c---CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-N---LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~---~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++|||||+.||..+++.|.++|++|+.+.|+     .+|.+.+..-. .   -.++++.+|+++++++..+..     
T Consensus         7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~-----~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           7 KTALITGASSGIGAELAKQLARRGYNLILVARR-----EDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-----HHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            579999999999999999999999999999999     77775554432 2   237899999999998888774     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~  125 (292)
                        .+|++|||||...                       +..++.++.-+.+.+ -.++|-  |..|....      +...
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~------p~~a  154 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPT------PYMA  154 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC------cchH
Confidence              5999999999866                       456777788888877 677775  44443222      1234


Q ss_pred             chHHHHHHHHHHHH-------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIE-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|++||..+..+.+       ..|+.++.+.||.+...|.. . ..       ......   ...+-+...+|+|+..+.
T Consensus       155 vY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~-~~-------~~~~~~---~~~~~~~~~~~va~~~~~  222 (265)
T COG0300         155 VYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A-KG-------SDVYLL---SPGELVLSPEDVAEAALK  222 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c-cc-------cccccc---cchhhccCHHHHHHHHHH
Confidence            56669998766654       36899999999999888764 1 10       011110   113356788999999999


Q ss_pred             hhcCCc
Q 039623          199 SIDGPR  204 (292)
Q Consensus       199 ~l~~~~  204 (292)
                      .+.+.+
T Consensus       223 ~l~~~k  228 (265)
T COG0300         223 ALEKGK  228 (265)
T ss_pred             HHhcCC
Confidence            998753

>PRK09186 flagellin modification protein A; Provisional

Probab=99.73  E-value=8.8e-17  Score=134.27  Aligned_cols=194  Identities=16%  Similarity=0.154  Sum_probs=125.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh----hcCCcEEEECCCCCHHHHHHHHcc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF----KNLGVNVLYGDLQDHESLIKAIKQ---   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~----~~~~v~~v~~D~~d~~~~~~~~~~---   73 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+    ....+.++.+|++|++++.++++.   
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADID-----KEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE   79 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecC-----hHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999987     4433222 222    123467789999999999888763   


Q ss_pred             ----CCEEEEcCcCCC--------------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCcc----C
Q 039623           74 ----VDVVISTVSRGQ--------------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDR----S  117 (292)
Q Consensus        74 ----~d~vi~~a~~~~--------------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~----~  117 (292)
                          +|+|||||+...                          +..++.+++++++.+ .+++|+ |+ ++.....    .
T Consensus        80 ~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~  158 (256)
T PRK09186         80 KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYE  158 (256)
T ss_pred             HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhcc
Confidence                799999996421                          234556667777666 678776 33 3321110    0


Q ss_pred             CccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccc
Q 039623          118 QNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKED  190 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  190 (292)
                      ..+......|..+|...+.+.+.       .++++++++|+.+.+.........    ...        ......+++++
T Consensus       159 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~----~~~--------~~~~~~~~~~~  226 (256)
T PRK09186        159 GTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNA----YKK--------CCNGKGMLDPD  226 (256)
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHH----HHh--------cCCccCCCCHH
Confidence            11111223455599998888752       478999999987754321111000    000        00112468999


Q ss_pred             hHHHHHHHhhcCCc-C-CCceEEEc
Q 039623          191 DIATYTINSIDGPR-T-LNKTLYIR  213 (292)
Q Consensus       191 D~a~~~~~~l~~~~-~-~~~~~~~~  213 (292)
                      |+|++++.++.+.. . .+..+.+.
T Consensus       227 dva~~~~~l~~~~~~~~~g~~~~~~  251 (256)
T PRK09186        227 DICGTLVFLLSDQSKYITGQNIIVD  251 (256)
T ss_pred             HhhhhHhheeccccccccCceEEec
Confidence            99999999997543 2 35555554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.73  E-value=1.8e-16  Score=131.93  Aligned_cols=198  Identities=16%  Similarity=0.146  Sum_probs=127.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN-----REAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999998     3333222 1121  3468999999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||++|...                   +.+...+++++    ++.+ .+++++ |+.+.....     .....|
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~-----~~~~~Y  152 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGS-----SGEAVY  152 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCC-----CCCchH
Confidence             5899999998532                   33444444444    4555 677776 443222221     112345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|.+++.+++.       .++++++++||.+.+..........   .....+ ..+........+...+|+|+++..+
T Consensus       153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  229 (250)
T TIGR03206       153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---ENPEKLREAFTRAIPLGRLGQPDDLPGAILFF  229 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---CChHHHHHHHHhcCCccCCcCHHHHHHHHHHH
Confidence            5599887777663       3799999999998876543322110   000000 0001111122346789999999999


Q ss_pred             hcCCc--CCCceEEEc
Q 039623          200 IDGPR--TLNKTLYIR  213 (292)
Q Consensus       200 l~~~~--~~~~~~~~~  213 (292)
                      +..+.  ..|+.+.+.
T Consensus       230 ~~~~~~~~~g~~~~~~  245 (250)
T TIGR03206       230 SSDDASFITGQVLSVS  245 (250)
T ss_pred             cCcccCCCcCcEEEeC
Confidence            87643  235667665

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.5e-16  Score=134.08  Aligned_cols=185  Identities=13%  Similarity=0.116  Sum_probs=123.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+|+||||||+||+++++.|.++|++|++++|+     .++.+. ...+.  +.++.++.+|++|.+++.++++      
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   75 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVN-----EEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW   75 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999999997     433322 22222  3467889999999988877764      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||++|...                       +..++.+++.+++.+ ..++++ |+.......     .....|
T Consensus        76 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~~~~~Y  149 (270)
T PRK05650         76 GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQG-----PAMSSY  149 (270)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCC-----CCchHH
Confidence             5899999999643                       223445666666666 677776 443222111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|...+.+.+.       .++++++++|+.+.++........      ...............+++++|+|+.++.++
T Consensus       150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l  223 (270)
T PRK05650        150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP------NPAMKAQVGKLLEKSPITAADIADYIYQQV  223 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccC------chhHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence            5599987766543       478999999999987654322111      000000000011224589999999999999


Q ss_pred             cCC
Q 039623          201 DGP  203 (292)
Q Consensus       201 ~~~  203 (292)
                      ++.
T Consensus       224 ~~~  226 (270)
T PRK05650        224 AKG  226 (270)
T ss_pred             hCC
Confidence            864

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.1e-16  Score=129.59  Aligned_cols=195  Identities=13%  Similarity=0.129  Sum_probs=127.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|..... .++.+.+ +.+.  ..++.++.+|+.|.+++.++++      
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRG-RAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF   85 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccccc-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6799999999999999999999999999988753322 2222222 1121  3468899999999998887764      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH-----HhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK-----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~-----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|.|||++|...                   +.+...+++++.     +.+ .+++|. |+.+.....     .+...
T Consensus        86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~  159 (249)
T PRK12827         86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGN-----RGQVN  159 (249)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCC-----CCCch
Confidence             5899999998643                   345677777776     344 566765 544332221     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|...+.+++.       .+++++.+||+.+.+.........       +..  .. ......+.+++|+|+++..+
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-------~~~--~~-~~~~~~~~~~~~va~~~~~l  229 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-------EHL--LN-PVPVQRLGEPDEVAALVAFL  229 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-------HHH--Hh-hCCCcCCcCHHHHHHHHHHH
Confidence            55599987776653       479999999999987643221100       000  00 00011245789999999999


Q ss_pred             hcCCcC--CCceEEEc
Q 039623          200 IDGPRT--LNKTLYIR  213 (292)
Q Consensus       200 l~~~~~--~~~~~~~~  213 (292)
                      +.+...  .++.+.+.
T Consensus       230 ~~~~~~~~~g~~~~~~  245 (249)
T PRK12827        230 VSDAASYVTGQVIPVD  245 (249)
T ss_pred             cCcccCCccCcEEEeC
Confidence            965422  24555554

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.9e-16  Score=131.08  Aligned_cols=195  Identities=16%  Similarity=0.129  Sum_probs=128.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .+..+.........+..+.+|++|++++.++++       ++
T Consensus        16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRS-----EDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999997     333333333334567799999999998877765       57


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                   +.+...+++++.+    .+ .+++++ |+.+.....     .....|..+
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~s  164 (255)
T PRK06841         91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVAL-----ERHVAYCAS  164 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCC-----CCCchHHHH
Confidence            99999998643                   3445555555543    34 567776 443322221     112345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .++++..++||++..........       +..............+.+++|+|++++.++..+
T Consensus       165 K~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  237 (255)
T PRK06841        165 KAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-------GEKGERAKKLIPAGRFAYPEEIAAAALFLASDA  237 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-------hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9998877763       47899999999887654321100       000000111111235678999999999999764


Q ss_pred             c--CCCceEEEcC
Q 039623          204 R--TLNKTLYIRP  214 (292)
Q Consensus       204 ~--~~~~~~~~~~  214 (292)
                      .  ..|+++.+.|
T Consensus       238 ~~~~~G~~i~~dg  250 (255)
T PRK06841        238 AAMITGENLVIDG  250 (255)
T ss_pred             ccCccCCEEEECC
Confidence            3  2356666653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=4.1e-16  Score=130.25  Aligned_cols=199  Identities=14%  Similarity=0.102  Sum_probs=127.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      .++++||||+|+||+++++.|.++|++|++++|+...   ...+..+.+.  ..++.++.+|++|++++.++++      
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDE---ELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchh---HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            1569999999999999999999999999999987321   1111222222  3468899999999988777664      


Q ss_pred             -cCCEEEEcCcCCC---------------------chhHHHHHHHHHHh----CC-----cceeec-cCCCCCCccCCcc
Q 039623           73 -QVDVVISTVSRGQ---------------------IPEQAKIIAAVKEA----GN-----VKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        73 -~~d~vi~~a~~~~---------------------~~~~~~l~~a~~~~----~~-----~~~~i~-s~~g~~~~~~~~~  120 (292)
                       .+|+|||++|...                     +.++..+++++.+.    ..     .+++++ |+.......    
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  154 (256)
T PRK12745         79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS----  154 (256)
T ss_pred             CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC----
Confidence             5899999998631                     34455666655432    11     345665 443322211    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                       .+...|..+|..++.+++.       .++++++++|+.+.+..........     .....  ........+.+++|++
T Consensus       155 -~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~d~a  226 (256)
T PRK12745        155 -PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKY-----DALIA--KGLVPMPRWGEPEDVA  226 (256)
T ss_pred             -CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhH-----Hhhhh--hcCCCcCCCcCHHHHH
Confidence             1245666699999887663       5789999999988765432211110     00000  0001123467899999


Q ss_pred             HHHHHhhcCCc--CCCceEEEcC
Q 039623          194 TYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       194 ~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +++..++....  ..|..|++.|
T Consensus       227 ~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        227 RAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             HHHHHHhCCcccccCCCEEEECC
Confidence            99999886542  2467777764

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5e-16  Score=130.29  Aligned_cols=185  Identities=13%  Similarity=0.087  Sum_probs=123.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |++|+||||+|+||+++++.|++.|++|++++|+     +.+.+.+ +.+.  ..++.++.+|++|.+++..+++     
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   75 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN-----ETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR   75 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999998     3332221 2221  3467889999999998887775     


Q ss_pred             --cCCEEEEcCcCCC--------------------chhHHHHHHHHHH---hCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ--------------------IPEQAKIIAAVKE---AGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~---~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||++|...                    +.++..+++.+.+   .+ .+++|. |+.......     .+...
T Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~  149 (263)
T PRK06181         76 FGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGV-----PTRSG  149 (263)
T ss_pred             cCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCC-----CCccH
Confidence              5899999998643                    2334455565542   22 355654 433222111     12345


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+++.       .++++++++||.+.+.........     .+..  ....+.+...+++++|+|++++.+
T Consensus       150 Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~dva~~i~~~  222 (263)
T PRK06181        150 YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG-----DGKP--LGKSPMQESKIMSAEECAEAILPA  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc-----cccc--cccccccccCCCCHHHHHHHHHHH
Confidence            55599998888753       478999999998876643322110     0111  111112233689999999999999


Q ss_pred             hcCC
Q 039623          200 IDGP  203 (292)
Q Consensus       200 l~~~  203 (292)
                      ++..
T Consensus       223 ~~~~  226 (263)
T PRK06181        223 IARR  226 (263)
T ss_pred             hhCC
Confidence            9853

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.72  E-value=3.1e-16  Score=130.11  Aligned_cols=196  Identities=16%  Similarity=0.135  Sum_probs=125.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||||++|+++++.|+++|++|+++.|++...   .....+.+  ....+.++.+|++|.+++.++++       
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG---AEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999888874211   11111222  23467889999999998887765       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|+|||++|...                   +.+...+++++.+    .+ .+++++ |+.+.....     .....|.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~-----~~~~~y~  156 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGN-----PGQANYA  156 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCC-----CCCchhH
Confidence            5799999998643                   2344555555543    34 566776 443322221     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|...+.+++.       .++++++++|+.+.+.........        .............+.+++|+++++..++.
T Consensus       157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (248)
T PRK05557        157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPED--------VKEAILAQIPLGRLGQPEEIASAVAFLAS  228 (248)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            599988766653       478999999998865432211100        00000001112235788999999999887


Q ss_pred             CC--cCCCceEEEcC
Q 039623          202 GP--RTLNKTLYIRP  214 (292)
Q Consensus       202 ~~--~~~~~~~~~~~  214 (292)
                      ..  ...++.+++.|
T Consensus       229 ~~~~~~~g~~~~i~~  243 (248)
T PRK05557        229 DEAAYITGQTLHVNG  243 (248)
T ss_pred             cccCCccccEEEecC
Confidence            62  23466777764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.9e-16  Score=131.48  Aligned_cols=141  Identities=21%  Similarity=0.262  Sum_probs=103.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||||+||++++++|.++|++|++++|+..     +.+     ...+++++.+|++|++++.++++       .+
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~-----~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPA-----RAA-----PIPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChh-----hcc-----ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            36999999999999999999999999999999832     221     13478899999999999988886       37


Q ss_pred             CEEEEcCcCCC-------------------c----hhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------I----PEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~----~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||+|...                   +    ...+.+++.+++.+ .+++|. |+.......     +....|..+
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~~s  148 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPA-----PYMALYAAS  148 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCC-----CCccHHHHH
Confidence            99999999743                   2    23344444456666 778776 443221111     112345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccc
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~  158 (292)
                      |..++.+++.       .|+++++++|+.+.+.+.
T Consensus       149 K~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~  183 (270)
T PRK06179        149 KHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD  183 (270)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence            9998887654       589999999999887654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.71  E-value=3.6e-16  Score=129.89  Aligned_cols=194  Identities=14%  Similarity=0.136  Sum_probs=127.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHcc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK--NLGVNVLYGDLQDHESLIKAIKQ-----   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~~-----   73 (292)
                      ++++||||+|+||+++++.|+++|++|+++.++.    +++.+. .+.+.  ..++.++.+|++|.+++.++++.     
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSS----KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCc----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999999998765542    222222 22222  23588899999999998887763     


Q ss_pred             --CCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cC-CCCCCccCCccCCCCcc
Q 039623           74 --VDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SE-FGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        74 --~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~  126 (292)
                        +|+|||++|...                   +.++..+++++.+    .+ ..++++ |+ ++....      .+...
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------~~~~~  155 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGG------FGQTN  155 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCC------CCCcc
Confidence              799999999743                   3345555566543    33 356665 44 332211      13445


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++++++|+.+.+.........        .............+.+++|++++++.+
T Consensus       156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~edva~~~~~~  227 (247)
T PRK12935        156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEE--------VRQKIVAKIPKKRFGQADEIAKGVVYL  227 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHH--------HHHHHHHhCCCCCCcCHHHHHHHHHHH
Confidence            66699988777653       479999999998865432211100        000011122345679999999999999


Q ss_pred             hcCCc-CCCceEEEcC
Q 039623          200 IDGPR-TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~-~~~~~~~~~~  214 (292)
                      ++... ..++.|++.|
T Consensus       228 ~~~~~~~~g~~~~i~~  243 (247)
T PRK12935        228 CRDGAYITGQQLNING  243 (247)
T ss_pred             cCcccCccCCEEEeCC
Confidence            97643 3467777764

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6e-16  Score=128.13  Aligned_cols=179  Identities=16%  Similarity=0.156  Sum_probs=120.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |++++||||+|.+|+.+++.|+++|++|++++|+     +++.+.+.. +.  ..++.++.+|++|.+++.++++     
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVARS-----QDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ   80 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999998     433322221 11  2468899999999998877765     


Q ss_pred             --cCCEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++||++|...                   +.    ..+.+++.+++.+ ..+++. |+.......     .....
T Consensus        81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~  154 (241)
T PRK07454         81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAF-----PQWGA  154 (241)
T ss_pred             cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCC-----CCccH
Confidence              4899999998642                   22    3334445555555 567776 433221111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .+++++++|||.+........          .......    ....+..+|+|++++.+
T Consensus       155 Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~----------~~~~~~~----~~~~~~~~~va~~~~~l  220 (241)
T PRK07454        155 YCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE----------TVQADFD----RSAMLSPEQVAQTILHL  220 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc----------ccccccc----cccCCCHHHHHHHHHHH
Confidence            55599998877653       489999999998865432110          0000000    11347889999999999


Q ss_pred             hcCCc
Q 039623          200 IDGPR  204 (292)
Q Consensus       200 l~~~~  204 (292)
                      +..+.
T Consensus       221 ~~~~~  225 (241)
T PRK07454        221 AQLPP  225 (241)
T ss_pred             HcCCc
Confidence            98764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.71  E-value=5.6e-16  Score=129.76  Aligned_cols=200  Identities=12%  Similarity=0.066  Sum_probs=126.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+.     ...+..+.+.  ...+.++.+|++|.+++.++++       
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-----LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-----HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999972     2222222332  2357789999999888777665       


Q ss_pred             cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++|++||+||...                        +..++.+++.+++.+ ..++|+ |+.... ..      +..+|
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-~~------~~~~Y  155 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR-GI------NRVPY  155 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc-CC------CCCcc
Confidence            5899999998421                        123456666666666 567776 443211 11      13456


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCC-CCCCCCCce----eecCCCcceEEeeccchHHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG-APAPPREKV----TIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ..+|..++.+.+.       .++++..++|+.+.+.......... .........    ...-.......+.+++|+|++
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  235 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAA  235 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHH
Confidence            6699999888764       3799999999999875311000000 000000000    000001112234578999999


Q ss_pred             HHHhhcCCc--CCCceEEEcC
Q 039623          196 TINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~  214 (292)
                      ++.++....  ..++.+++.|
T Consensus       236 ~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        236 ILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             HHHHcCcccccccCcEEeecC
Confidence            999997542  2456777754

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.8e-16  Score=129.35  Aligned_cols=193  Identities=11%  Similarity=0.060  Sum_probs=124.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++..+.+|++|.+++.++++      
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADIN-----AEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999997     3332222 2221  2356788999999988877665      


Q ss_pred             -cCCEEEEcCcCCC----------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 -QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 -~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                       ++|+|||++|...                      +.++.++++++.+.    + .+++++ |+.+..        .+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~--------~~~  152 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAW--------LYS  152 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEeccccc--------CCc
Confidence             5899999999631                      34555566655543    3 456765 442221        123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+++.       .+++++.++||.+..........       ..............-+.+++|+|++++
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~a~~~~  225 (250)
T PRK07774        153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-------KEFVADMVKGIPLSRMGTPEDLVGMCL  225 (250)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-------HHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            4566699999888774       36889999998876543221100       000000000011112457899999999


Q ss_pred             HhhcCCc--CCCceEEEcCC
Q 039623          198 NSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~  215 (292)
                      .++....  ..++.|++.+.
T Consensus       226 ~~~~~~~~~~~g~~~~v~~g  245 (250)
T PRK07774        226 FLLSDEASWITGQIFNVDGG  245 (250)
T ss_pred             HHhChhhhCcCCCEEEECCC
Confidence            9987642  34667777643

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.4e-16  Score=129.17  Aligned_cols=194  Identities=15%  Similarity=0.113  Sum_probs=127.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      ++++||||+|++|+++++.|.++|++|++++|+     +++.+.+..  ..+..++.+|++|.+++.++++   ++|+||
T Consensus        10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060         10 KSVLVTGASSGIGRACAVALAQRGARVVAAARN-----AAALDRLAG--ETGCEPLRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            579999999999999999999999999999998     444433222  2257789999999998888876   489999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      |++|...                   +.+...+++++.+.    +...++++ |+.+.....     .+...|..+|..+
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~y~~sK~a~  157 (245)
T PRK07060         83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL-----PDHLAYCASKAAL  157 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC-----CCCcHhHHHHHHH
Confidence            9998643                   34455556655442    21256665 443221111     1234555599999


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--C
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--T  205 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~  205 (292)
                      +.+++.       .+++++.+||+.+.+..........   .....  .. .......+++++|+|+++..++..+.  .
T Consensus       158 ~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~---~~~~~--~~-~~~~~~~~~~~~d~a~~~~~l~~~~~~~~  231 (245)
T PRK07060        158 DAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDP---QKSGP--ML-AAIPLGRFAEVDDVAAPILFLLSDAASMV  231 (245)
T ss_pred             HHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCH---HHHHH--HH-hcCCCCCCCCHHHHHHHHHHHcCcccCCc
Confidence            887763       3789999999998776432110000   00000  00 01113457899999999999998653  2


Q ss_pred             CCceEEEc
Q 039623          206 LNKTLYIR  213 (292)
Q Consensus       206 ~~~~~~~~  213 (292)
                      .|+.+++.
T Consensus       232 ~G~~~~~~  239 (245)
T PRK07060        232 SGVSLPVD  239 (245)
T ss_pred             cCcEEeEC
Confidence            35666654

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.9e-16  Score=130.72  Aligned_cols=182  Identities=17%  Similarity=0.087  Sum_probs=118.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |++++||||||+||+++++.|+++|++|.+++|+     +++.+.+.. ....++.++.+|++|.+++.++++       
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDIN-----EAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATG   75 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            8899999999999999999999999999999998     444433322 223568999999999988877765       


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|+||||+|...                   +.++..+++++    +..+ ..++++ |+.......     .....|
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y  149 (260)
T PRK08267         76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQ-----PGLAVY  149 (260)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCC-----CCchhh
Confidence             4699999999753                   33444454544    3444 456665 443222221     112344


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .+++++.++|+.+-.........         .. .........-.+..+|+|++++.++
T Consensus       150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~---------~~-~~~~~~~~~~~~~~~~va~~~~~~~  219 (260)
T PRK08267        150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN---------EV-DAGSTKRLGVRLTPEDVAEAVWAAV  219 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc---------hh-hhhhHhhccCCCCHHHHHHHHHHHH
Confidence            4599998877764       47899999998886543221000         00 0000000111356699999999999


Q ss_pred             cCC
Q 039623          201 DGP  203 (292)
Q Consensus       201 ~~~  203 (292)
                      +..
T Consensus       220 ~~~  222 (260)
T PRK08267        220 QHP  222 (260)
T ss_pred             hCC
Confidence            654

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.70  E-value=8.9e-16  Score=127.69  Aligned_cols=195  Identities=14%  Similarity=0.108  Sum_probs=127.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGL-----AAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999887     4433222 2222  2468899999999999888774      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|+|||++|...                   +.+...+++++.+    .+ ..++++ |+.+.....     .....|
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~y  156 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGA-----PKLGAY  156 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCC-----CCcchH
Confidence             5899999998742                   3344455555443    33 347776 442221111     112345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+++.       .+++++.++||.+.+........       ......+........+++++|+|++++.++
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  229 (250)
T PRK12939        157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-------DERHAYYLKGRALERLQVPDDVAGAVLFLL  229 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-------hHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            5599998887763       47889999999886554321100       000111111222345689999999999999


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      ....  ..|+.+.+.|
T Consensus       230 ~~~~~~~~G~~i~~~g  245 (250)
T PRK12939        230 SDAARFVTGQLLPVNG  245 (250)
T ss_pred             CccccCccCcEEEECC
Confidence            7642  2466676664

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.1e-16  Score=131.27  Aligned_cols=142  Identities=20%  Similarity=0.241  Sum_probs=107.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--------~   73 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     +++.+   .+...+++++.+|++|.+++.++++        .
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~-----~~~~~---~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGWRVFATCRK-----EEDVA---ALEAEGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHH---HHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998     44443   3334578999999999988777664        4


Q ss_pred             CCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcchH
Q 039623           74 VDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        74 ~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~  128 (292)
                      +|++||+||...                       +..++.+++.+++.+ ..++|+ |+ .|...      ..+...|.
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~------~~~~~~Y~  149 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVP------MKYRGAYN  149 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCC------CCccchHH
Confidence            799999998643                       223677888888877 678876 44 33221      12234555


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~  158 (292)
                      .+|+.++.+.+.       .|+++++++||.+...+.
T Consensus       150 asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        150 ASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence            699999988653       589999999999876643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.70  E-value=4.1e-16  Score=130.54  Aligned_cols=205  Identities=11%  Similarity=0.058  Sum_probs=126.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     .++.+.+. .+.    ...+.++.+|++|.+++.++++    
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   77 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN-----SEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDE   77 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999997     33332221 121    1358899999999988877664    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHH----HHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQA----KIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~----~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         .+|+|||++|...                   +.++.    .+++.+++.+.-.++++ |+.......     ....
T Consensus        78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-----~~~~  152 (259)
T PRK12384         78 IFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS-----KHNS  152 (259)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC-----CCCc
Confidence               5799999998643                   23333    44444444441136665 332211111     1223


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccc-cccccccCCC--CCC-CCCceeecCCCcceEEeeccchHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGY-FLPTLAQIGA--PAP-PREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      .|..+|+.++.+++.       .|+++..+|||.+.+. ..........  ... .......+.++.....+++++|++.
T Consensus       153 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~  232 (259)
T PRK12384        153 GYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLN  232 (259)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHH
Confidence            455599997776653       5799999999976432 2111110000  000 0111111222334567889999999


Q ss_pred             HHHHhhcCCc--CCCceEEEcCCC
Q 039623          195 YTINSIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~~~  216 (292)
                      ++..++.+..  ..|+.|++.|..
T Consensus       233 ~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        233 MLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             HHHHHcCcccccccCceEEEcCCE
Confidence            9999987543  246777876543

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1e-15  Score=127.96  Aligned_cols=203  Identities=12%  Similarity=0.067  Sum_probs=127.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+     +++.+.+ ..+.  ..++..+.+|++|.+++..+++      
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAART-----AERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999997     3333222 2222  3457899999999988877664      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       .+|+|||++|...                    +.+...+++++.+.-  +..++|+ |+......     ..+...|.
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----~~~~~~Y~  155 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----QPKYGAYK  155 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----CCCcchhH
Confidence             5799999998632                    334556666665421  1246666 44332211     12234555


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCC-CC-Cc-eeecCCCcceEEeeccchHHHHHHH
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAP-PR-EK-VTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .+|..++.+++.       .++++..++|+.+.+.............. .. .. ............+.+++|++++++.
T Consensus       156 ~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~  235 (258)
T PRK07890        156 MAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLF  235 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHH
Confidence            599998888764       37999999999998765432211100000 00 00 0000011122346788999999999


Q ss_pred             hhcCC--cCCCceEEEcC
Q 039623          199 SIDGP--RTLNKTLYIRP  214 (292)
Q Consensus       199 ~l~~~--~~~~~~~~~~~  214 (292)
                      +++..  ...|+.+.+.|
T Consensus       236 l~~~~~~~~~G~~i~~~g  253 (258)
T PRK07890        236 LASDLARAITGQTLDVNC  253 (258)
T ss_pred             HcCHhhhCccCcEEEeCC
Confidence            99753  23355555543

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.2e-15  Score=127.49  Aligned_cols=173  Identities=17%  Similarity=0.155  Sum_probs=118.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hhcC-CcEEEECCCCCHHHHHHHHc------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FKNL-GVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~-~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ||+|+||||+|+||+++++.|.++|++|++++|+     +++.+.+.. +... ++.++.+|++|.+++.++++      
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   76 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARR-----TDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH   76 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999998     444433222 1111 68899999999998887765      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHH----HHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAK----IIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~----l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                       .+|++||++|...                    +.++..    ++.++++.+ ..++|. |+ .+....      +...
T Consensus        77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~------~~~~  149 (257)
T PRK07024         77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGL------PGAG  149 (257)
T ss_pred             CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC------CCCc
Confidence             3799999998632                    223333    444666665 567775 33 332111      1123


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .+++++.++|+.+.+......       .       +...    ..+..+|+++.++.
T Consensus       150 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~-------~~~~----~~~~~~~~a~~~~~  211 (257)
T PRK07024        150 AYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------P-------YPMP----FLMDADRFAARAAR  211 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------C-------CCCC----CccCHHHHHHHHHH
Confidence            455599999888753       589999999999876532110       0       0000    12578999999999


Q ss_pred             hhcCC
Q 039623          199 SIDGP  203 (292)
Q Consensus       199 ~l~~~  203 (292)
                      ++.+.
T Consensus       212 ~l~~~  216 (257)
T PRK07024        212 AIARG  216 (257)
T ss_pred             HHhCC
Confidence            99764

>PRK06128 oxidoreductase; Provisional

Probab=99.69  E-value=9.9e-16  Score=130.98  Aligned_cols=200  Identities=14%  Similarity=0.109  Sum_probs=128.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |++|||||+|+||+++++.|+++|++|++..|+...   ...+ ..+.+.  ...+.++.+|++|.+++.++++      
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEE---QDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcch---HHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            679999999999999999999999999888775321   1111 112221  3357789999999988877764      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                       ++|++||+||...                    +.++..+++++.+.- .-.++|+ |+.......     .....|..
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~a  207 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS-----PTLLDYAS  207 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-----CCchhHHH
Confidence             5899999999632                    445667777776531 0135665 443222111     11234555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+++.       .|+++..++||.+.+.......      ........+........+.+.+|+|.+++.++..
T Consensus       208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~------~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~  281 (300)
T PRK06128        208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG------QPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQ  281 (300)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC------CCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence            99998888764       4899999999998776432110      0001111122222233467889999999999876


Q ss_pred             CcC--CCceEEEcCC
Q 039623          203 PRT--LNKTLYIRPP  215 (292)
Q Consensus       203 ~~~--~~~~~~~~~~  215 (292)
                      ...  .|+.+++.|.
T Consensus       282 ~~~~~~G~~~~v~gg  296 (300)
T PRK06128        282 ESSYVTGEVFGVTGG  296 (300)
T ss_pred             cccCccCcEEeeCCC
Confidence            432  3677777653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.69  E-value=1e-15  Score=144.36  Aligned_cols=203  Identities=13%  Similarity=0.035  Sum_probs=132.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     .++.+.+.....  .++..+.+|++|.+++.++++       
T Consensus       423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~-----~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLD-----EEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999998     444333222212  378899999999998877765       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCc-ceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNV-KRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~-~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++|+|||++|...                   +.+...+++++    ++.+ . .++++ |+.......     .....|
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS~~~~~~~-----~~~~~Y  571 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIASKNAVNPG-----PNFGAY  571 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECCccccCCC-----CCcHHH
Confidence            5899999999543                   23345554444    4444 3 45665 443222111     123455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceec--cccccccccCCCCCCCCCce----eecCCCcceEEeeccchHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFA--GYFLPTLAQIGAPAPPREKV----TIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~D~a~  194 (292)
                      ..+|...+.+++.       .+++++.++|+.++  ................+...    ..+..+.....+++++|+|+
T Consensus       572 ~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~  651 (681)
T PRK08324        572 GAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAE  651 (681)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHH
Confidence            5599999988764       36899999999995  32221110000000001010    12344555678899999999


Q ss_pred             HHHHhhc--CCcCCCceEEEcCC
Q 039623          195 YTINSID--GPRTLNKTLYIRPP  215 (292)
Q Consensus       195 ~~~~~l~--~~~~~~~~~~~~~~  215 (292)
                      +++.++.  .....|.++++.|.
T Consensus       652 a~~~l~s~~~~~~tG~~i~vdgG  674 (681)
T PRK08324        652 AVVFLASGLLSKTTGAIITVDGG  674 (681)
T ss_pred             HHHHHhCccccCCcCCEEEECCC
Confidence            9999985  33445677888654

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.69  E-value=5.1e-16  Score=122.55  Aligned_cols=228  Identities=18%  Similarity=0.211  Sum_probs=158.1

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      .||||-||.-|++|++.|+.+||+|+++.|+++.-+..+++.+-.-    .........+|++|...+.+++.  +++-|
T Consensus        31 ALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEi  110 (376)
T KOG1372|consen   31 ALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEV  110 (376)
T ss_pred             EEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhh
Confidence            6999999999999999999999999999998876655565544221    22457899999999999999997  78999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhCCc--ceeec-c---CCCCCCcc---CCccCCCCcchHHHHHH
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAGNV--KRFLP-S---EFGNDVDR---SQNVVEPAKSAYADKIK  133 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~~~--~~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K~~  133 (292)
                      +|+|+..+               ..++.+++++.+..+-.  -+|.. |   -||.....   +.+|..|.+||..+|..
T Consensus       111 YnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy  190 (376)
T KOG1372|consen  111 YNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMY  190 (376)
T ss_pred             hhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhh
Confidence            99999877               46899999999988711  23333 2   26643221   16777788888878876


Q ss_pred             HHHHH----HHcCccEEEEecceec--------cccccccccCCCCC--CCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          134 IRRAI----EAEGIQYTYVSCNCFA--------GYFLPTLAQIGAPA--PPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       134 ~e~~~----~~~~~~~~~ir~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      +-.++    +.+++   +-+.|+.+        .+|...-+...+..  .....-..+++.+..+||-|..|.+++|+..
T Consensus       191 ~~WivvNyREAYnm---fAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~m  267 (376)
T KOG1372|consen  191 GYWIVVNYREAYNM---FACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLM  267 (376)
T ss_pred             heEEEEEhHHhhcc---eeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHH
Confidence            43322    22222   11223333        22333222221111  1222234578888999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      ++++++.  .|.+. .++..|.+|+++.-...+|..+.
T Consensus       268 LQ~d~Pd--DfViA-Tge~hsVrEF~~~aF~~ig~~l~  302 (376)
T KOG1372|consen  268 LQQDSPD--DFVIA-TGEQHSVREFCNLAFAEIGEVLN  302 (376)
T ss_pred             HhcCCCC--ceEEe-cCCcccHHHHHHHHHHhhCcEEe
Confidence            9987643  34554 56699999999988877775443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.69  E-value=7.1e-16  Score=127.83  Aligned_cols=174  Identities=17%  Similarity=0.193  Sum_probs=119.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh---hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF---KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ||+|+||||+|+||.++++.|+++|++|++++|+     +++.+.. +.+   ...++.++.+|++|.+++.++++    
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARD-----VERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA   75 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC-----HHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh
Confidence            8899999999999999999999999999999998     4333221 111   23478999999999998887765    


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|.+||++|...                   +.++..+++++.    +.+ .+++++ |+.....+.     .....|.
T Consensus        76 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~  149 (243)
T PRK07102         76 LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGR-----ASNYVYG  149 (243)
T ss_pred             cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCC-----CCCcccH
Confidence            4799999998643                   334444555443    344 567775 433221111     1233555


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .++++..++|+.+.+......           ..   .    ......++|+++.++..++
T Consensus       150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-----------~~---~----~~~~~~~~~~a~~i~~~~~  211 (243)
T PRK07102        150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-----------KL---P----GPLTAQPEEVAKDIFRAIE  211 (243)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-----------CC---C----ccccCCHHHHHHHHHHHHh
Confidence            699988777763       478999999998876532110           00   0    0124578999999999998


Q ss_pred             CC
Q 039623          202 GP  203 (292)
Q Consensus       202 ~~  203 (292)
                      ++
T Consensus       212 ~~  213 (243)
T PRK07102        212 KG  213 (243)
T ss_pred             CC
Confidence            65

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.5e-15  Score=125.97  Aligned_cols=193  Identities=12%  Similarity=0.123  Sum_probs=123.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchhhH-hhh--hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++|+||||||+||.++++.|+++|++|+++ .|+     +++.+.+ +.+  ...++.++.+|++|++++.++++     
T Consensus         6 ~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          6 KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDIN-----EEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999998 887     3333222 112  13458899999999998877775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||++|...                   +.+..++++++.    +.+ .+++++ |+.+.....     .....
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~-----~~~~~  154 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGA-----SCEVL  154 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCC-----CCccH
Confidence              6899999998653                   233334444443    444 456665 543322221     11234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|...+.+++.       .+++++.++||.+.+..........     ....  .. ......+...+|++++++.+
T Consensus       155 y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~-----~~~~--~~-~~~~~~~~~~~~va~~~~~l  226 (247)
T PRK05565        155 YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED-----KEGL--AE-EIPLGRLGKPEEIAKVVLFL  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH-----HHHH--Hh-cCCCCCCCCHHHHHHHHHHH
Confidence            44599887766653       5899999999988655332211100     0000  00 01123456889999999999


Q ss_pred             hcCCc--CCCceEEEc
Q 039623          200 IDGPR--TLNKTLYIR  213 (292)
Q Consensus       200 l~~~~--~~~~~~~~~  213 (292)
                      +....  ..++.+++.
T Consensus       227 ~~~~~~~~~g~~~~~~  242 (247)
T PRK05565        227 ASDDASYITGQIITVD  242 (247)
T ss_pred             cCCccCCccCcEEEec
Confidence            97643  245555554

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.7e-15  Score=128.79  Aligned_cols=197  Identities=15%  Similarity=0.151  Sum_probs=127.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+...    ..+.+ ..+.  ..++.++.+|++|.+++.++++      
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE----DANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch----HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999987421    11111 1122  2357889999999998877764      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHh-CCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEA-GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~-~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                       ++|+|||+||...                    +.+..++++++.+. ....++|+ |+.......     .....|..
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~-----~~~~~Y~~  197 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN-----ETLIDYSA  197 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC-----CCcchhHH
Confidence             5899999998632                    34566666666542 10245665 433222111     11234555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+++.       .+++++.++||.+.........       .......+........+.+++|+|++++.++..
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~  270 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-------DEEKVSQFGSNTPMQRPGQPEELAPAYVFLASP  270 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-------CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc
Confidence            99998887763       4789999999988765432210       011111111222234578899999999999986


Q ss_pred             Cc--CCCceEEEcC
Q 039623          203 PR--TLNKTLYIRP  214 (292)
Q Consensus       203 ~~--~~~~~~~~~~  214 (292)
                      ..  ..+..+.+.|
T Consensus       271 ~~~~~~G~~i~idg  284 (290)
T PRK06701        271 DSSYITGQMLHVNG  284 (290)
T ss_pred             ccCCccCcEEEeCC
Confidence            43  2456666654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.68  E-value=4.7e-15  Score=122.40  Aligned_cols=175  Identities=23%  Similarity=0.220  Sum_probs=118.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhc-CCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKN-LGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|++|++++++|+++|++|++++|+     +++.+.+ +.+.. .++..+.+|+.|.+++.++++       
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARD-----QKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC-----HHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            479999999999999999999999999999998     4443222 22211 568899999999998887775       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHH---hCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE---AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~---~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      ++|+|||++|...                   +.+...+++++.+   .+ .+++|. |+......     ......|..
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~-----~~~~~~y~~  155 (237)
T PRK07326         82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLAGTNF-----FAGGAAYNA  155 (237)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChhhccC-----CCCCchHHH
Confidence            6899999998642                   2333455555543   23 466765 44322111     112334555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|+.++.+.+.       .+++++.+||+.+.+++.....        ...         ....+..+|++++++.++..
T Consensus       156 sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~--------~~~---------~~~~~~~~d~a~~~~~~l~~  218 (237)
T PRK07326        156 SKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP--------SEK---------DAWKIQPEDIAQLVLDLLKM  218 (237)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc--------chh---------hhccCCHHHHHHHHHHHHhC
Confidence            99887776653       5899999999998766432110        000         00136889999999999987


Q ss_pred             Cc
Q 039623          203 PR  204 (292)
Q Consensus       203 ~~  204 (292)
                      +.
T Consensus       219 ~~  220 (237)
T PRK07326        219 PP  220 (237)
T ss_pred             Cc
Confidence            64

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.1e-15  Score=125.78  Aligned_cols=178  Identities=16%  Similarity=0.142  Sum_probs=119.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~   74 (292)
                      ++|+||||+|.||++++++|+++| ++|++++|+.+....+..+.+......+++++.+|++|.+++.++++      ++
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i   88 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV   88 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence            579999999999999999999995 99999999843200111111222112368999999999887655543      69


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                       +...+.+++++++.+ ..++++ |+.+.....     .+...|..+
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~-----~~~~~Y~~s  162 (253)
T PRK07904         89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVR-----RSNFVYGST  162 (253)
T ss_pred             CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC-----CCCcchHHH
Confidence            99999998753                       122355777888776 677776 443321111     122345559


Q ss_pred             HHHHHHHHH-------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIE-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |+.+..+.+       ..++++++++||.+.+......        .. .          ...+..+|+|+.++..+.++
T Consensus       163 Kaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------~~-~----------~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        163 KAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------KE-A----------PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------CC-C----------CCCCCHHHHHHHHHHHHHcC
Confidence            998775543       3689999999999976532110        00 0          01368899999999999875


Q ss_pred             c
Q 039623          204 R  204 (292)
Q Consensus       204 ~  204 (292)
                      +
T Consensus       224 ~  224 (253)
T PRK07904        224 K  224 (253)
T ss_pred             C
Confidence            3

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.68  E-value=2.1e-15  Score=125.43  Aligned_cols=197  Identities=14%  Similarity=0.130  Sum_probs=122.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||.+++++|+++|++|++++|+..   .+..+.+.. ....+..+.+|++|.+++.++++       ++
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~---~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP---SETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH---HHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999998631   111111121 13458899999999998876664       48


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                   +.+...+++++.    +.+...++|+ |+.......     .....|..+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~~s  156 (248)
T TIGR01832        82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-----IRVPSYTAS  156 (248)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-----CCCchhHHH
Confidence            99999998643                   233444555543    2221245665 332211111     112345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+++.       .+++++.++||.+.+.........      ...............+.+.+|+|++++.++...
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (248)
T TIGR01832       157 KHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD------EDRNAAILERIPAGRWGTPDDIGGPAVFLASSA  230 (248)
T ss_pred             HHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC------hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9998888764       379999999998876643211000      000000000011246788999999999999754


Q ss_pred             cC--CCceEEEc
Q 039623          204 RT--LNKTLYIR  213 (292)
Q Consensus       204 ~~--~~~~~~~~  213 (292)
                      ..  .|..+.+.
T Consensus       231 ~~~~~G~~i~~d  242 (248)
T TIGR01832       231 SDYVNGYTLAVD  242 (248)
T ss_pred             ccCcCCcEEEeC
Confidence            32  34444444

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.6e-15  Score=125.85  Aligned_cols=198  Identities=14%  Similarity=0.150  Sum_probs=123.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++       .+
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGARVAIVDID-----ADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998     443333322224568899999999998877765       57


Q ss_pred             CEEEEcCcCCC------------------chhHHHHHHHHHH---hCCcceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           75 DVVISTVSRGQ------------------IPEQAKIIAAVKE---AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        75 d~vi~~a~~~~------------------~~~~~~l~~a~~~---~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      |++||++|...                  +.+...+++++.+   .+ -.++|+ |+.......     .....|..+|.
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~-----~~~~~Y~asKa  155 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGAIVNFTSISAKFAQ-----TGRWLYPASKA  155 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCC-----CCCchhHHHHH
Confidence            99999998632                  2233333433322   22 245655 443222211     11234555999


Q ss_pred             HHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc-
Q 039623          133 KIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR-  204 (292)
Q Consensus       133 ~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-  204 (292)
                      .++.+.+.       .++++..++||.+.+.......... . .....+.  ........+...+|+|++++.++.... 
T Consensus       156 a~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~-~-~~~~~~~--~~~~p~~r~~~p~dva~~~~~l~s~~~~  231 (261)
T PRK08265        156 AIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGD-R-AKADRVA--APFHLLGRVGDPEEVAQVVAFLCSDAAS  231 (261)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccc-h-hHHHHhh--cccCCCCCccCHHHHHHHHHHHcCcccc
Confidence            98887764       4789999999987665432211000 0 0000000  000111234578999999999997542 


Q ss_pred             -CCCceEEEcC
Q 039623          205 -TLNKTLYIRP  214 (292)
Q Consensus       205 -~~~~~~~~~~  214 (292)
                       ..|..+.+.|
T Consensus       232 ~~tG~~i~vdg  242 (261)
T PRK08265        232 FVTGADYAVDG  242 (261)
T ss_pred             CccCcEEEECC
Confidence             2455666653

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.68  E-value=2.7e-15  Score=125.57  Aligned_cols=198  Identities=13%  Similarity=0.128  Sum_probs=126.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||.++++.|+++|++|++++|+     .++.+.... +.  +.++.++.+|++|.+++.+++.      
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARK-----AEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999997     444332222 21  2457789999999998866654      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh-----CCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA-----GNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~-----~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|+|||++|...                   +.++..+++++.+.     + ..++++ |+.+..... .....+...
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~-~~~~~~~~~  165 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGN-PPEVMDTIA  165 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCC-CccccCcch
Confidence             5899999998632                   45667777776554     4 567776 443222211 111112345


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|+.++.+++.       .++++..++|+.+-+.........    ... .   .-.......+...+|++.++..+
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~----~~~-~---~~~~~~~~~~~~~~~va~~~~~l  237 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER----LGE-D---LLAHTPLGRLGDDEDLKGAALLL  237 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH----HHH-H---HHhcCCCCCCcCHHHHHHHHHHH
Confidence            55599999888764       378889999988865432211100    000 0   00001111234579999999988


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +....  ..|..+.+.|
T Consensus       238 ~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        238 ASDASKHITGQILAVDG  254 (259)
T ss_pred             hCccccCccCCEEEECC
Confidence            86542  2356666653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-15  Score=125.13  Aligned_cols=196  Identities=14%  Similarity=0.048  Sum_probs=123.8

Q ss_pred             EEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-cCCcEEEECCCCCHHHHHHHHc---cCCEEEE
Q 039623            5 LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-NLGVNVLYGDLQDHESLIKAIK---QVDVVIS   79 (292)
Q Consensus         5 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~v~~v~~D~~d~~~~~~~~~---~~d~vi~   79 (292)
                      +||||+|+||+++++.|+++|++|++++|+     +++.+.+.. +. ..+++++.+|++|.+++.++++   .+|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRS-----RDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence            699999999999999999999999999998     444332221 11 3468899999999999999887   4799999


Q ss_pred             cCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHH
Q 039623           80 TVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIE  139 (292)
Q Consensus        80 ~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~  139 (292)
                      ++|...                   +.+...++++....+ ..++++ |+.+.....     .+...|..+|..++.+.+
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~-----~~~~~Y~~sK~a~~~~~~  149 (230)
T PRK07041         76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPS-----ASGVLQGAINAALEALAR  149 (230)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCC-----CcchHHHHHHHHHHHHHH
Confidence            998633                   234455555444434 567776 443322211     123345559999999887


Q ss_pred             Hc-----CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcC
Q 039623          140 AE-----GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRP  214 (292)
Q Consensus       140 ~~-----~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~  214 (292)
                      ..     +++++.++|+.+.+.........    .................+...+|+|+++..++.+....++.|.+.|
T Consensus       150 ~la~e~~~irv~~i~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        150 GLALELAPVRVNTVSPGLVDTPLWSKLAGD----AREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             HHHHHhhCceEEEEeecccccHHHHhhhcc----chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence            52     45677777777655432211000    0000000000000011235679999999999987544567777765


Q ss_pred             C
Q 039623          215 P  215 (292)
Q Consensus       215 ~  215 (292)
                      .
T Consensus       226 g  226 (230)
T PRK07041        226 G  226 (230)
T ss_pred             C
Confidence            3

>PRK05717 oxidoreductase; Validated

Probab=99.68  E-value=3.4e-15  Score=124.71  Aligned_cols=194  Identities=10%  Similarity=0.057  Sum_probs=123.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++       .+
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLD-----RERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999887     333322222223468899999999988766553       47


Q ss_pred             CEEEEcCcCCC---------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ---------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~---------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                     +.++..+++++.+.  ....++|. |+.......     .....|..+
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-----~~~~~Y~~s  160 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-----PDTEAYAAS  160 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-----CCCcchHHH
Confidence            99999998642                     44677777777532  11245554 443222211     113345559


Q ss_pred             HHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceee-cCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI-FGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+++.      .++++..++|+++.+........        ..... .........+.+++|+|.++..++...
T Consensus       161 Kaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        161 KGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA--------EPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc--------hHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            9999888764      24788888999887653211100        00000 000011123568899999999988653


Q ss_pred             c--CCCceEEEc
Q 039623          204 R--TLNKTLYIR  213 (292)
Q Consensus       204 ~--~~~~~~~~~  213 (292)
                      .  ..|+.+.+.
T Consensus       233 ~~~~~g~~~~~~  244 (255)
T PRK05717        233 AGFVTGQEFVVD  244 (255)
T ss_pred             hcCccCcEEEEC
Confidence            2  235556554

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.68  E-value=2.5e-15  Score=125.23  Aligned_cols=193  Identities=13%  Similarity=0.078  Sum_probs=125.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||++++++|+++|++|++++|+..          . .....+..+.+|++|.+++.++++       .+
T Consensus         9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~----------~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL----------T-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh----------h-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999730          1 113468899999999999888775       37


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |+|||++|...                   +.+...+++++    ++.+ ..++++ |+.+....     ..+...|..+
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~-----~~~~~~Y~~s  151 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVP-----RIGMAAYGAS  151 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccC-----CCCCchhHHH
Confidence            99999999753                   23344455554    3344 456765 44432222     1223445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCC----ceeecCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPRE----KVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..++.+++.       .+++++.++|+.+.+...........  ....    .............+++++|+|++++.+
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  229 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDED--GEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFL  229 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchh--hhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHH
Confidence            9998887753       57899999999997764322110000  0000    000111112234678999999999999


Q ss_pred             hcCCc--CCCceEEEc
Q 039623          200 IDGPR--TLNKTLYIR  213 (292)
Q Consensus       200 l~~~~--~~~~~~~~~  213 (292)
                      +....  ..++++.+.
T Consensus       230 ~~~~~~~~~g~~i~~~  245 (252)
T PRK08220        230 ASDLASHITLQDIVVD  245 (252)
T ss_pred             hcchhcCccCcEEEEC
Confidence            97542  234555554

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.68  E-value=4.5e-15  Score=129.77  Aligned_cols=231  Identities=15%  Similarity=0.180  Sum_probs=153.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC---CCEEEEecCCCCCCCc-ch------hhHhhhh------cCCcEEEECCCCC--
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG---HPTFALVRESTASDPV-KG------KLIEIFK------NLGVNVLYGDLQD--   63 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-~~------~~~~~~~------~~~v~~v~~D~~d--   63 (292)
                      ++|+|||||||+|.-+++.|+...   .++..+.|.....+.. +.      +.++.+.      ..++..+.||+.+  
T Consensus        13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~   92 (467)
T KOG1221|consen   13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD   92 (467)
T ss_pred             CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence            579999999999999999999863   4788888875432111 11      1122221      2568999999995  


Q ss_pred             ----HHHHHHHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cC-CCCCC-----ccC---
Q 039623           64 ----HESLIKAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDV-----DRS---  117 (292)
Q Consensus        64 ----~~~~~~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~-----~~~---  117 (292)
                          +.++..+.+.+|+|||+|+...            ..+++++++.|++..+.+.+++ |. |....     +..   
T Consensus        93 LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~  172 (467)
T KOG1221|consen   93 LGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPM  172 (467)
T ss_pred             cCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCc
Confidence                3556667778999999999865            6799999999999876777876 32 32200     000   


Q ss_pred             ------------------------CccC--CCCcchHHHHHHHHHHHHH--cCccEEEEecceeccccccccccCC----
Q 039623          118 ------------------------QNVV--EPAKSAYADKIKIRRAIEA--EGIQYTYVSCNCFAGYFLPTLAQIG----  165 (292)
Q Consensus       118 ------------------------~~~~--~~~~~~~~~K~~~e~~~~~--~~~~~~~ir~~~~~~~~~~~~~~~~----  165 (292)
                                              ....  ..++.|.-+|+.+|+.+.+  .++|.+|+||+++...+...+.-+.    
T Consensus       173 ~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~  252 (467)
T KOG1221|consen  173 PETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLN  252 (467)
T ss_pred             cccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCC
Confidence                                    0000  0133444599999999986  5799999999999764322221110    


Q ss_pred             -----CCCCCCCce-eecCCCcceEEeeccchHHHHHHHhhcCC-c----CCCceEEEc-CCCccccHHHHHHHHHHHh
Q 039623          166 -----APAPPREKV-TIFGDGNAGAVYNKEDDIATYTINSIDGP-R----TLNKTLYIR-PPGNVYSFNELVTLWENKI  232 (292)
Q Consensus       166 -----~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~----~~~~~~~~~-~~~~~~t~~e~~~~~~~~~  232 (292)
                           +.....+.+ ....+.+...++|++|.++++++.+...- .    ....+||++ +...++++.++.+...+..
T Consensus       253 gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~  331 (467)
T KOG1221|consen  253 GPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYF  331 (467)
T ss_pred             CCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhc
Confidence                 001122222 23456677889999999999999776321 1    123588887 3455899999999887654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.68  E-value=2.8e-15  Score=124.34  Aligned_cols=194  Identities=12%  Similarity=0.113  Sum_probs=123.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|+.|.+..|+     .++.+.+......++.++.+|++|.+++.++++       ++
T Consensus         7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTR-----VEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999998888887     444433322224468899999999998887754       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |+|||++|...                   +.+...+++++.    +.+ ..++|+ |+.......     .....|..+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~s  155 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGN-----PGQANYCAS  155 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCC-----CCCcchHHH
Confidence            99999999642                   334444555543    334 567776 443222221     112345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .+++++.++|+++.+.........     ....  ... ......+.+.+|+++++..++...
T Consensus       156 k~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-----~~~~--~~~-~~~~~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        156 KAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK-----QKEA--IMG-AIPMKRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH-----HHHH--Hhc-CCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9877666542       479999999998765432211100     0000  000 011223457899999999888654


Q ss_pred             cC--CCceEEEcC
Q 039623          204 RT--LNKTLYIRP  214 (292)
Q Consensus       204 ~~--~~~~~~~~~  214 (292)
                      ..  .|+.+++.+
T Consensus       228 ~~~~~G~~~~~~~  240 (245)
T PRK12936        228 AAYVTGQTIHVNG  240 (245)
T ss_pred             ccCcCCCEEEECC
Confidence            32  356676653

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.5e-15  Score=125.23  Aligned_cols=194  Identities=14%  Similarity=0.132  Sum_probs=124.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||.++++.|+++|++|++++|+     +++.+.+. .+.  ..++.++.+|++|++++.++++      
T Consensus        11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814         11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAART-----ESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     44433222 221  3467889999999998877765      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHH-----hCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE-----AGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~-----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|+|||+||...                   +.++.++.+++.+     .+ ..+++. |+.......     .+...
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~-----~~~~~  159 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRLAG-----RGFAA  159 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccCCC-----CCCch
Confidence             5899999998532                   4456667777653     23 456665 443222111     23445


Q ss_pred             hHHHHHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.      .+++++.++||.+.+.......       ..... ...............+|+|++++.+
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVA-------ANDELRAPMEKATPLRRLGDPEDIAAAAVYL  232 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhcc-------CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            66699999888874      2467778888877654322110       00000 0000001112345789999999999


Q ss_pred             hcCCc--CCCceEEEc
Q 039623          200 IDGPR--TLNKTLYIR  213 (292)
Q Consensus       200 l~~~~--~~~~~~~~~  213 (292)
                      +....  ..++.+.+.
T Consensus       233 ~~~~~~~~~g~~~~~~  248 (263)
T PRK07814        233 ASPAGSYLTGKTLEVD  248 (263)
T ss_pred             cCccccCcCCCEEEEC
Confidence            97532  235555554

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.8e-15  Score=122.71  Aligned_cols=188  Identities=14%  Similarity=0.154  Sum_probs=122.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc------cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK------QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d   75 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+....             ...+++.+|++|.+++.++++      ++|
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   70 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-------------FPGELFACDLADIEQTAATLAQINEIHPVD   70 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-------------cCceEEEeeCCCHHHHHHHHHHHHHhCCCc
Confidence            6799999999999999999999999999999984321             122578999999998887775      589


Q ss_pred             EEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           76 VVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        76 ~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      +|||++|...                       +...+.+++++++.+ .+++++ |+.+. ...     .....|..+|
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~-~~~-----~~~~~Y~~sK  143 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAI-FGA-----LDRTSYSAAK  143 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccc-cCC-----CCchHHHHHH
Confidence            9999999743                       122444556666666 677776 44332 111     1134555599


Q ss_pred             HHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          132 IKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       132 ~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      ...+.+++.       .+++++.+|||.+.+..........    ....-.... ..........+|+|.+++.++..+.
T Consensus       144 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~~~~~  218 (234)
T PRK07577        144 SALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG----SEEEKRVLA-SIPMRRLGTPEEVAAAIAFLLSDDA  218 (234)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc----hhHHHHHhh-cCCCCCCcCHHHHHHHHHHHhCccc
Confidence            998877763       4899999999998765432211000    000000000 0011123477999999999997642


Q ss_pred             --CCCceEEEcC
Q 039623          205 --TLNKTLYIRP  214 (292)
Q Consensus       205 --~~~~~~~~~~  214 (292)
                        ..+..+.+.|
T Consensus       219 ~~~~g~~~~~~g  230 (234)
T PRK07577        219 GFITGQVLGVDG  230 (234)
T ss_pred             CCccceEEEecC
Confidence              2356666654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=3.2e-15  Score=124.58  Aligned_cols=196  Identities=16%  Similarity=0.128  Sum_probs=125.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--------   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--------   73 (292)
                      ++++||||+|+||+++++.|+++|++|++..++.    .++.+.+......++.++.+|++|++++.++++.        
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQS----EDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4799999999999999999999999998876642    2233222222234688999999999988887752        


Q ss_pred             CCEEEEcCcCC--------C-----------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCC
Q 039623           74 VDVVISTVSRG--------Q-----------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        74 ~d~vi~~a~~~--------~-----------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                      +|++||++|..        .                 +.+...+++++.    +.+ ..++++ ++...     ..+..+
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~-----~~~~~~  155 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLF-----QNPVVP  155 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccc-----cCCCCC
Confidence            89999999752        0                 334555566554    334 456665 33211     112223


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+++.       .++++..++||++.........       ................+.+.+|+++++
T Consensus       156 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~  228 (253)
T PRK08642        156 YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-------PDEVFDLIAATTPLRKVTTPQEFADAV  228 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-------CHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            45566699999998875       3688888899988654221100       000000000111123468899999999


Q ss_pred             HHhhcCCc--CCCceEEEcC
Q 039623          197 INSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~  214 (292)
                      ..++....  ..|..+.+.|
T Consensus       229 ~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        229 LFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             HHHcCchhcCccCCEEEeCC
Confidence            99997542  3456666654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.67  E-value=1.8e-15  Score=125.47  Aligned_cols=196  Identities=16%  Similarity=0.180  Sum_probs=126.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|++|+++++.|.++|++|++++|+...   ...+.....  ....+.++.+|+.|.+++.++++       
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   79 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG   79 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999998421   111111111  12358899999999998877764       


Q ss_pred             cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      .+|++||++|...                   +.+    ++.+++.+++.+ ..++|+ |+.+.....      +..+.|
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~------~~~~~Y  152 (245)
T PRK12824         80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQ------FGQTNY  152 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCC------CCChHH
Confidence            4899999998643                   223    344456666666 677776 444332221      233445


Q ss_pred             H-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 A-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      . +|..++.+++.       .++++++++|+.+.+........        .....+........+..++|+++++..++
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~va~~~~~l~  224 (245)
T PRK12824        153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP--------EVLQSIVNQIPMKRLGTPEEIAAAVAFLV  224 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH--------HHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            5 99987776653       47899999999887653211100        00000011111233557899999999988


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       225 ~~~~~~~~G~~~~~~~g  241 (245)
T PRK12824        225 SEAAGFITGETISINGG  241 (245)
T ss_pred             CccccCccCcEEEECCC
Confidence            6532  34677777643

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.5e-15  Score=129.27  Aligned_cols=187  Identities=12%  Similarity=0.106  Sum_probs=126.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|.||+++++.|.++|++|++++|+     .++.+.+ +.+.  ...+..+.+|++|.+++.++++      
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~-----~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGAKVVLLARG-----EEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            469999999999999999999999999999998     4444322 2222  3457889999999998887764      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++||++|...                       +..++.+++.+++.+ ..++|. |+.......     +....|
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~-----~~~~~Y  157 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSI-----PLQSAY  157 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCC-----CcchHH
Confidence             5899999999642                       335566777777765 567776 443322221     123345


Q ss_pred             HHHHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          128 YADKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       128 ~~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      ..+|..++.+.+.         .+++++.++|+.+.+.+.......    ....       ......+..++|+|++++.
T Consensus       158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~----~~~~-------~~~~~~~~~pe~vA~~i~~  226 (334)
T PRK07109        158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR----LPVE-------PQPVPPIYQPEVVADAILY  226 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh----cccc-------ccCCCCCCCHHHHHHHHHH
Confidence            5599988776653         258899999998876543321110    0000       0011234688999999999


Q ss_pred             hhcCCcCCCceEEEc
Q 039623          199 SIDGPRTLNKTLYIR  213 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~  213 (292)
                      ++.++   ++.+++.
T Consensus       227 ~~~~~---~~~~~vg  238 (334)
T PRK07109        227 AAEHP---RRELWVG  238 (334)
T ss_pred             HHhCC---CcEEEeC
Confidence            99875   3455664

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.67  E-value=3.1e-15  Score=125.00  Aligned_cols=195  Identities=16%  Similarity=0.176  Sum_probs=125.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     +++.+.+ +.+.  ..++..+.+|++|++++.++++      
T Consensus        12 k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124         12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRN-----AATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999998     3333222 2222  3458899999999998887775      


Q ss_pred             -cCCEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++||++|...                   +.    ..+.+++.+.+.+ .+++|+ |+.......     .....|
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-----~~~~~Y  160 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVAR-----AGDAVY  160 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCC-----CCccHh
Confidence             4699999999643                   22    3333445554455 677776 443222111     112345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+++.       .++++..++|+.+.+.........      ...............+++++|++.+++.++
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  234 (256)
T PRK06124        161 PAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD------PAVGPWLAQRTPLGRWGRPEEIAGAAVFLA  234 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            4599998877663       479999999999887642211100      000000000011224688999999999999


Q ss_pred             cCCcC--CCceEEEc
Q 039623          201 DGPRT--LNKTLYIR  213 (292)
Q Consensus       201 ~~~~~--~~~~~~~~  213 (292)
                      .++..  .|+.+.+.
T Consensus       235 ~~~~~~~~G~~i~~d  249 (256)
T PRK06124        235 SPAASYVNGHVLAVD  249 (256)
T ss_pred             CcccCCcCCCEEEEC
Confidence            87532  35555554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=3.5e-15  Score=123.39  Aligned_cols=176  Identities=19%  Similarity=0.182  Sum_probs=119.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||.+++++|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLART-----EENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            369999999999999999999999999999998     3333221 2222  3468889999999999888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|+|||++|...                   +.++..+++++.    +.+ .+++++ |+.......     .+...|
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-----~~~~~Y  156 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGA-----AVTSAY  156 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCC-----CCCcch
Confidence             6899999998643                   233344555544    344 466665 443222221     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+++.       .+++++++|||.+.+.......      ...+      .   ...++..+|+|++++.++
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~~------~---~~~~~~~~~~a~~~~~~l  221 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG------LTDG------N---PDKVMQPEDLAEFIVAQL  221 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc------cccc------C---CCCCCCHHHHHHHHHHHH
Confidence            5599987777653       5899999999998766432110      0000      0   123478899999999999


Q ss_pred             cCC
Q 039623          201 DGP  203 (292)
Q Consensus       201 ~~~  203 (292)
                      .++
T Consensus       222 ~~~  224 (239)
T PRK07666        222 KLN  224 (239)
T ss_pred             hCC
Confidence            875

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.67  E-value=5.4e-15  Score=123.63  Aligned_cols=203  Identities=17%  Similarity=0.125  Sum_probs=125.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||.++++.|+++|++|.++.+++... .++.+ ..+.+.  +..+.++.+|++|++++.++++      
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAAS-KADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccc-hHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            5799999999999999999999999988887764322 22222 122222  3467889999999999887765      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceee--ccC-CCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFL--PSE-FGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i--~s~-~g~~~~~~~~~~~~~~~~~  128 (292)
                       ++|++||+||...                   +.++..+++++.+.- .-.+++  .|+ .+....       ....|.
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~-------~~~~Y~  160 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP-------FYSAYA  160 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC-------Ccccch
Confidence             5899999999632                   334455556654321 012333  233 232211       134555


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .+++++.++||.+.+...............  .............+.+++|++.++..+++
T Consensus       161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~l~~  238 (257)
T PRK12744        161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYH--KTAAALSPFSKTGLTDIEDIVPFIRFLVT  238 (257)
T ss_pred             hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcc--cccccccccccCCCCCHHHHHHHHHHhhc
Confidence            699999998875       368999999999976543211100000000  00000111111246789999999999998


Q ss_pred             CCcC-CCceEEEcC
Q 039623          202 GPRT-LNKTLYIRP  214 (292)
Q Consensus       202 ~~~~-~~~~~~~~~  214 (292)
                      .... .|+++++.|
T Consensus       239 ~~~~~~g~~~~~~g  252 (257)
T PRK12744        239 DGWWITGQTILING  252 (257)
T ss_pred             ccceeecceEeecC
Confidence            5332 356676654

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3e-15  Score=125.18  Aligned_cols=199  Identities=13%  Similarity=0.099  Sum_probs=126.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+.     ++.+..+.+.  ..++.++.+|++|++++.++++       
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA-----PDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCCh-----hhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999999999983     3333333332  3468899999999998888775       


Q ss_pred             cCCEEEEcCcCCC------------------chhHHHHHHHHHH---hCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           73 QVDVVISTVSRGQ------------------IPEQAKIIAAVKE---AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------------~~~~~~l~~a~~~---~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      ++|+|||++|...                  +.+...+.+++.+   .+ ..++++ |+.......     .+...|..+
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-----~~~~~Y~~s  156 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQ-----GGTSGYAAA  156 (258)
T ss_pred             CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCC-----CCCchhHHH
Confidence            5899999999532                  2233344444432   22 356665 443222111     123445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-ee-ecCCCcceEEeeccchHHHHHHHhhc
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VT-IFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      |..++.+++.       .+++++.++||.+.+..........   ..... .. ..........+..++|+|++++.++.
T Consensus       157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  233 (258)
T PRK08628        157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATF---DDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS  233 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhc---cCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhC
Confidence            9999888874       4789999999999876433211110   00000 00 00000001246788999999999997


Q ss_pred             CC--cCCCceEEEcC
Q 039623          202 GP--RTLNKTLYIRP  214 (292)
Q Consensus       202 ~~--~~~~~~~~~~~  214 (292)
                      ..  ...+..+.+.|
T Consensus       234 ~~~~~~~g~~~~~~g  248 (258)
T PRK08628        234 ERSSHTTGQWLFVDG  248 (258)
T ss_pred             hhhccccCceEEecC
Confidence            64  23456666653

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.3e-15  Score=125.91  Aligned_cols=199  Identities=12%  Similarity=0.038  Sum_probs=124.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhh--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIF--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|+++.|+.    .++.+. .+.+  ...++.++.+|++|.+++.++++      
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRS----RDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999887752    222211 1222  13457889999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC---Ccceeec-cCCCCCCccCCccCCCC-cch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG---NVKRFLP-SEFGNDVDRSQNVVEPA-KSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~---~~~~~i~-s~~g~~~~~~~~~~~~~-~~~  127 (292)
                       ++|+|||+||...                   +.++..+++++.+..   .-.+++. ++-.....      .|. ..|
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~------~p~~~~Y  159 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL------NPDFLSY  159 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC------CCCchHH
Confidence             4799999998632                   445566666655432   0234444 22111111      122 345


Q ss_pred             HHHHHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          128 YADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       128 ~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      ..+|..++.+.+.      .+++++.++||.+.+.........      ........    .....+++|+|++++.+++
T Consensus       160 ~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~----~~~~~~~~d~a~~~~~~~~  229 (258)
T PRK09134        160 TLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDF------ARQHAATP----LGRGSTPEEIAAAVRYLLD  229 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHH------HHHHhcCC----CCCCcCHHHHHHHHHHHhc
Confidence            5599988887764      237888889988765321100000      00000000    1123678999999999998


Q ss_pred             CCcCCCceEEEcCCCccccH
Q 039623          202 GPRTLNKTLYIRPPGNVYSF  221 (292)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~t~  221 (292)
                      ++...++.+++.|.. .+++
T Consensus       230 ~~~~~g~~~~i~gg~-~~~~  248 (258)
T PRK09134        230 APSVTGQMIAVDGGQ-HLAW  248 (258)
T ss_pred             CCCcCCCEEEECCCe-eccc
Confidence            765567777776543 4443

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.66  E-value=3.5e-15  Score=124.83  Aligned_cols=198  Identities=13%  Similarity=0.100  Sum_probs=125.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++||||||+|.||.++++.|+++|++|++++|+..   .++......-...++.++.+|++|.+++.++++       .+
T Consensus        16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN---WDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999998721   111111111113468899999999998887776       57


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                       +..++.+++.+++.+ ..++++ |+.......     .....|..+
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  166 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGG-----KFVPAYTAS  166 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCC-----CCchhhHHH
Confidence            99999998643                       223445555555555 566665 443221111     112345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+++.       .|++++.++||.+...........     ......... ......+...+|++..+..++...
T Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        167 KHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-----KNRNDEILK-RIPAGRWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-----hHHHHHHHh-cCCCCCCCCHHHHHHHHHHHcChh
Confidence            9999888764       478999999998876532211100     000000000 011224577899999999998754


Q ss_pred             c--CCCceEEEcC
Q 039623          204 R--TLNKTLYIRP  214 (292)
Q Consensus       204 ~--~~~~~~~~~~  214 (292)
                      .  ..|.++.+.|
T Consensus       241 ~~~~~G~~i~~dg  253 (258)
T PRK06935        241 SDYVNGHILAVDG  253 (258)
T ss_pred             hcCCCCCEEEECC
Confidence            2  2456666653

>PRK08643 acetoin reductase; Validated

Probab=99.66  E-value=8e-15  Score=122.50  Aligned_cols=202  Identities=13%  Similarity=0.140  Sum_probs=122.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ ..+.  ..++.++.+|++|++++.++++      
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN-----EETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF   77 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999997     3333222 2222  2467889999999998877765      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHH----HHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQA----KIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~----~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++|||+|...                   +.++.    .+++.+++.+.-.++++ |+.......     .....|
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y  152 (256)
T PRK08643         78 GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-----PELAVY  152 (256)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-----CCCchh
Confidence             5899999998643                   22222    33333333321235554 443322221     123445


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce---eecCCCcceEEeeccchHHHHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV---TIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..+|..++.+.+.       .|++++.++|+++.+...................   ..+-.......+...+|+|.++.
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  232 (256)
T PRK08643        153 SSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVS  232 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            5599998877663       5789999999988765432211100000000000   00000001123467899999999


Q ss_pred             HhhcCCc--CCCceEEEc
Q 039623          198 NSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~  213 (292)
                      .++....  ..|..+.+.
T Consensus       233 ~L~~~~~~~~~G~~i~vd  250 (256)
T PRK08643        233 FLAGPDSDYITGQTIIVD  250 (256)
T ss_pred             HHhCccccCccCcEEEeC
Confidence            9997542  335555554

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.66  E-value=7.7e-15  Score=123.86  Aligned_cols=143  Identities=22%  Similarity=0.231  Sum_probs=101.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      ||+++||||+|+||+++++.|.++|++|++++|+     .++.+   .+...++.++.+|++|.+++.++++       +
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARK-----AEDVE---ALAAAGFTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHH---HHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            8899999999999999999999999999999998     44432   2334578899999999988877764       5


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHHHH---hCCcceeec-cC-CCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAVKE---AGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~~~---~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|+|||++|...                   +.++..+++++.+   .+ ..+++. |+ .+....      .....|..
T Consensus        73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~------~~~~~Y~~  145 (274)
T PRK05693         73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT------PFAGAYCA  145 (274)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC------CCccHHHH
Confidence            899999999643                   2234444454432   22 345554 33 332211      12344555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccc
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~  158 (292)
                      +|..++.+.+.       .|++++.++||.+.+.+.
T Consensus       146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~  181 (274)
T PRK05693        146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFA  181 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccc
Confidence            99998877653       589999999999976643

>PLN02253 xanthoxin dehydrogenase

Probab=99.66  E-value=4.7e-15  Score=125.59  Aligned_cols=201  Identities=12%  Similarity=0.118  Sum_probs=124.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh-cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK-NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+. ..++.++.+|++|.+++.++++       
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ-----DDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999987     3332222 2221 2358899999999999888776       


Q ss_pred             cCCEEEEcCcCCC---------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 QVDVVISTVSRGQ---------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 ~~d~vi~~a~~~~---------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                      ++|++||+||...                     +.++..+++++.+    .+ -.+++. ++.......     .....
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~-----~~~~~  167 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGG-----LGPHA  167 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccC-----CCCcc
Confidence            5899999998631                     3344555555543    22 234444 332221111     11235


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce----eecCCCcc-eEEeeccchHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV----TIFGDGNA-GAVYNKEDDIAT  194 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~i~v~D~a~  194 (292)
                      |..+|..++.+.+.       .++++..++|+.+.+...........  ......    ........ ....++++|+|+
T Consensus       168 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~  245 (280)
T PLN02253        168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDE--RTEDALAGFRAFAGKNANLKGVELTVDDVAN  245 (280)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccccc--chhhhhhhhHHHhhcCCCCcCCCCCHHHHHH
Confidence            55699999888874       37889999999886653211100000  000000    00000000 123478999999


Q ss_pred             HHHHhhcCCc--CCCceEEEcCC
Q 039623          195 YTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +++.++....  ..|..+.+.|.
T Consensus       246 ~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
T PLN02253        246 AVLFLASDEARYISGLNLMIDGG  268 (280)
T ss_pred             HHHhhcCcccccccCcEEEECCc
Confidence            9999987542  23566777643

>PRK06196 oxidoreductase; Provisional

Probab=99.66  E-value=3.8e-15  Score=128.29  Aligned_cols=190  Identities=16%  Similarity=0.124  Sum_probs=121.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      ++|+||||+|+||++++++|+++|++|++++|+     .++.+.+ +.+  .++.++.+|++|.+++.++++       +
T Consensus        27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~-----~~~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARR-----PDVAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998     4443322 222  248899999999998877764       5


Q ss_pred             CCEEEEcCcCCC---------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCcc--C-----CccCCCC
Q 039623           74 VDVVISTVSRGQ---------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDR--S-----QNVVEPA  124 (292)
Q Consensus        74 ~d~vi~~a~~~~---------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~--~-----~~~~~~~  124 (292)
                      +|++||+||...                     +..++.++..+++.+ ..++|+ |+.+.....  .     ..+..+.
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~  178 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDKW  178 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCChH
Confidence            899999998642                     223566666666665 467776 443321110  0     0111223


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCC-Ccce-EEeeccchHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGD-GNAG-AVYNKEDDIATY  195 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~i~v~D~a~~  195 (292)
                      ..|..+|...+.+.+.       .|++++.++||.+.++.........   ...  ...... +... ..+..++|.|..
T Consensus       179 ~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~a~~  253 (315)
T PRK06196        179 LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE---QVA--LGWVDEHGNPIDPGFKTPAQGAAT  253 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh---hhh--hhhhhhhhhhhhhhcCCHhHHHHH
Confidence            3455599998877643       4799999999999876432211000   000  000000 0000 024577999999


Q ss_pred             HHHhhcCCc
Q 039623          196 TINSIDGPR  204 (292)
Q Consensus       196 ~~~~l~~~~  204 (292)
                      ++.++..+.
T Consensus       254 ~~~l~~~~~  262 (315)
T PRK06196        254 QVWAATSPQ  262 (315)
T ss_pred             HHHHhcCCc
Confidence            999997643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=5.9e-15  Score=123.24  Aligned_cols=196  Identities=17%  Similarity=0.173  Sum_probs=124.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|.||+++++.|.++|++|+++.|+.    .+..   +.+...++.++.+|++|++++.++++       ++
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~---~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA----ENEA---KELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc----HHHH---HHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999887753    2222   22333468899999999998888775       57


Q ss_pred             CEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++|||+|...                   +.    .++.+++.+++.+ ..++|+ |+ .+.....     .....|..
T Consensus        81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~-----~~~~~Y~a  154 (255)
T PRK06463         81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAA-----EGTTFYAI  154 (255)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCC-----CCccHhHH
Confidence            99999998742                   22    2456666666555 467766 33 2221111     11233445


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHHhhc
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      +|..++.+.+.       .++++..++||++-..........    ...... ..+........+...+|+|++++.++.
T Consensus       155 sKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  230 (255)
T PRK06463        155 TKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ----EEAEKLRELFRNKTVLKTTGKPEDIANIVLFLAS  230 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc----cchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcC
Confidence            99998888764       478999999998865532111000    000000 000111112345678999999999997


Q ss_pred             CCc--CCCceEEEcC
Q 039623          202 GPR--TLNKTLYIRP  214 (292)
Q Consensus       202 ~~~--~~~~~~~~~~  214 (292)
                      ...  ..|..+.+.|
T Consensus       231 ~~~~~~~G~~~~~dg  245 (255)
T PRK06463        231 DDARYITGQVIVADG  245 (255)
T ss_pred             hhhcCCCCCEEEECC
Confidence            643  2355565543

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.66  E-value=6e-15  Score=123.12  Aligned_cols=195  Identities=12%  Similarity=0.108  Sum_probs=125.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||.++++.|.++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARR-----QAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            479999999999999999999999999999998     4433322 2222  2357889999999998887775      


Q ss_pred             -cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                       .+|++||+||...                        +...+.+++.+++.+ ..++++ |+ .+.....     ....
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~-----~~~~  155 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGF-----PGMA  155 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCC-----CCcc
Confidence             5899999998631                        123444555665555 566765 43 3321111     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..++.+.+.       .++++..++||.+-.........       .... ...........+...+|+|++++
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~  228 (254)
T PRK07478        156 AYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD-------TPEALAFVAGLHALKRMAQPEEIAQAAL  228 (254)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC-------CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            455599998887763       36889999999886553211100       0000 00000011123568899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++.++.  ..|..+.+.|
T Consensus       229 ~l~s~~~~~~~G~~~~~dg  247 (254)
T PRK07478        229 FLASDAASFVTGTALLVDG  247 (254)
T ss_pred             HHcCchhcCCCCCeEEeCC
Confidence            9997542  2355666653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.65  E-value=7.3e-15  Score=122.58  Aligned_cols=196  Identities=11%  Similarity=0.116  Sum_probs=125.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|.||+++++.|+++|++|++.+|+     .++.+.+ +.+.  ...+..+.+|++|++++.+++.      
T Consensus        10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085         10 KNILITGSAQGIGFLLATGLAEYGAEIIINDIT-----AERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998     3333222 2222  2356788999999998887764      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHH----HHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIA----AVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~----a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++||++|...                   +.+...+++    .+++.+ ..++|+ |+.......     .....|
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y  158 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGR-----DTITPY  158 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCC-----CCCcch
Confidence             4899999998632                   223333344    443444 466765 443322211     123456


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|+++..++||++.+.........      ...............+...+|+++++..++
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~~va~~~~~l~  232 (254)
T PRK08085        159 AASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED------EAFTAWLCKRTPAARWGDPQELIGAAVFLS  232 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            6699998888774       479999999998876643221100      000000001111234678899999999999


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      ....  ..|..+.+.|
T Consensus       233 ~~~~~~i~G~~i~~dg  248 (254)
T PRK08085        233 SKASDFVNGHLLFVDG  248 (254)
T ss_pred             CccccCCcCCEEEECC
Confidence            7532  2355555543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.65  E-value=8.8e-15  Score=121.10  Aligned_cols=173  Identities=17%  Similarity=0.126  Sum_probs=121.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc----CCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ----VDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~----~d~   76 (292)
                      |++++||||||+||++++++|+++|++|++++|+     +++.+.+... ..++.++.+|++|.+++.++++.    +|.
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~   74 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRN-----QSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPFIPEL   74 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence            7899999999999999999999999999999998     5554333221 34688999999999999998874    689


Q ss_pred             EEEcCcCCC-------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           77 VISTVSRGQ-------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        77 vi~~a~~~~-------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      ++|++|...                   +.++.++++++.+.  + -.+++. |+.+.....     .....|..+|..+
T Consensus        75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~asK~a~  148 (240)
T PRK06101         75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIASELAL-----PRAEAYGASKAAV  148 (240)
T ss_pred             EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhhccCC-----CCCchhhHHHHHH
Confidence            999997532                   34566777776653  2 234544 443222111     1233555599999


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      +.+.+.       .+++++.++|+.+.+......           ..   ..    ...+..+|+++.++..++.+
T Consensus       149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-----------~~---~~----~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        149 AYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-----------TF---AM----PMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-----------CC---CC----CcccCHHHHHHHHHHHHhcC
Confidence            888653       589999999999876532210           00   00    01368899999999999875

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.6e-15  Score=123.01  Aligned_cols=196  Identities=12%  Similarity=0.085  Sum_probs=124.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|.++|++|+++.|+..    ... +..+.+.  ..++.++.+|++|.+++.++++      
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSA----AAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCH----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999988877632    111 1112221  3468899999999998888876      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                       ++|++||++|...                   +.++..+++++.+.- ...++++ |+.+.....     ++...|..+
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~~~Y~~s  156 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL-----PGYGPYAAS  156 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-----CCCchhHHH
Confidence             5899999999642                   345556666665431 1235665 443322211     223455569


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+++.       .++.++.++||++-+.........       .....+........+.+++|+++++..++..+
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  229 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA-------EQIDQLAGLAPLERLGTPEEIAAAVAFLAGPD  229 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH-------HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            9999888764       368888999988765532111000       00000111111223457799999999999764


Q ss_pred             cC--CCceEEEc
Q 039623          204 RT--LNKTLYIR  213 (292)
Q Consensus       204 ~~--~~~~~~~~  213 (292)
                      ..  .+..+++.
T Consensus       230 ~~~~~g~~~~~~  241 (245)
T PRK12937        230 GAWVNGQVLRVN  241 (245)
T ss_pred             ccCccccEEEeC
Confidence            32  35556554

>PRK12743 oxidoreductase; Provisional

Probab=99.65  E-value=7e-15  Score=122.88  Aligned_cols=196  Identities=14%  Similarity=0.068  Sum_probs=123.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|.||+++++.|+++|++|.++.|+.    .++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSD----EEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCC----hHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999887653    2222211 2221  3468899999999988777664      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++||++|...                   +.+...+++++.+    .++-.++|+ |+......     ..+...|
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-----~~~~~~Y  153 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP-----LPGASAY  153 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC-----CCCcchh
Confidence             4899999998643                   3344455555443    221246665 44332221     1233456


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+++.       .+++++.++||.+.+.......        ...............+.+.+|++.++..++
T Consensus       154 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  225 (256)
T PRK12743        154 TAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD--------SDVKPDSRPGIPLGRPGDTHEIASLVAWLC  225 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC--------hHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            6699998887763       4789999999988765321110        000000000001112457899999999998


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      ....  ..|..+.+.|
T Consensus       226 ~~~~~~~~G~~~~~dg  241 (256)
T PRK12743        226 SEGASYTTGQSLIVDG  241 (256)
T ss_pred             CccccCcCCcEEEECC
Confidence            7543  2355666654

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.6e-15  Score=123.28  Aligned_cols=199  Identities=11%  Similarity=0.053  Sum_probs=124.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+     +++.+.+ +.+.    ..++.++.+|++|++++.++++    
T Consensus         8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          8 KVALVTGAAQGIGAAIARAFAREGAAVALADLD-----AALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            479999999999999999999999999999997     4333222 2222    3457889999999988887775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         .+|++||+||...                   +.++    +.++..+++.+ ..++|. |+.......     ....
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~  156 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKII-----PGCF  156 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCC-----CCch
Confidence               5899999999642                   2233    33444444444 466776 443222111     1223


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..++.+.+.       .|+++..++||++-...........   ...... ...........+...+|+|.+++
T Consensus       157 ~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~va~~~~  233 (260)
T PRK07063        157 PYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ---PDPAAARAETLALQPMKRIGRPEEVAMTAV  233 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc---CChHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            455599998888764       4788999999988655322111000   000000 00000001123467899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++.+..  ..|+.+.+.|
T Consensus       234 fl~s~~~~~itG~~i~vdg  252 (260)
T PRK07063        234 FLASDEAPFINATCITIDG  252 (260)
T ss_pred             HHcCccccccCCcEEEECC
Confidence            9997643  2355555543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.65  E-value=1.2e-14  Score=121.69  Aligned_cols=194  Identities=12%  Similarity=0.149  Sum_probs=123.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      +++|||||+|.||+++++.|.++|++|++++|+...             ..++.++.+|++|++++.++++       .+
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999997321             1257889999999988877775       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..++++    +++.+ ..++|+ |+......     ......|..+
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~s  147 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAV-----TRNAAAYVTS  147 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccC-----CCCCchhhhh
Confidence            99999998643                   2334444444    44444 567776 44322211     1223455559


Q ss_pred             HHHHHHHHHH------cCccEEEEecceeccccccccccCCC-CCCC--CCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          131 KIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGA-PAPP--REKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      |..++.+.+.      .++++..++||++............. ....  ......+........+..++|+|++++.++.
T Consensus       148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s  227 (258)
T PRK06398        148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLAS  227 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcC
Confidence            9999888874      23778888898886553322110000 0000  0000001111112345688999999999997


Q ss_pred             CCc--CCCceEEEcC
Q 039623          202 GPR--TLNKTLYIRP  214 (292)
Q Consensus       202 ~~~--~~~~~~~~~~  214 (292)
                      ...  ..|+.+.+.|
T Consensus       228 ~~~~~~~G~~i~~dg  242 (258)
T PRK06398        228 DLASFITGECVTVDG  242 (258)
T ss_pred             cccCCCCCcEEEECC
Confidence            542  2456666654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.65  E-value=5.8e-15  Score=123.84  Aligned_cols=202  Identities=17%  Similarity=0.154  Sum_probs=124.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     ....+..+.+.  ...+.++.+|++|.+++.++++       
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDIS-----PEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999997     32222222222  3357789999999998887765       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cC-CCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~  127 (292)
                      .+|++||++|...                   +.+...+++++.    +.+ ..+++. |+ .+.....     .....|
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----~~~~~Y  155 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVAD-----PGETAY  155 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCC-----CCcchH
Confidence            5799999999643                   334555555544    333 456665 33 3221111     112344


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|...+.+.+.       .++++..++||.+.+..............................+...+|+|+++..++
T Consensus       156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~  235 (263)
T PRK08226        156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLA  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc
Confidence            4599998887764       378999999998876643221110000000000000001111223468899999999988


Q ss_pred             cCC--cCCCceEEEcC
Q 039623          201 DGP--RTLNKTLYIRP  214 (292)
Q Consensus       201 ~~~--~~~~~~~~~~~  214 (292)
                      ...  ...++.+.+.|
T Consensus       236 ~~~~~~~~g~~i~~dg  251 (263)
T PRK08226        236 SDESSYLTGTQNVIDG  251 (263)
T ss_pred             CchhcCCcCceEeECC
Confidence            643  22355555553

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.8e-15  Score=125.97  Aligned_cols=198  Identities=13%  Similarity=0.068  Sum_probs=121.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccC------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQV------   74 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~------   74 (292)
                      ||+|+||||+|+||+++++.|+++|++|++++|+..    +..+.+......++.++.+|++|.+++.++++.+      
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN----KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch----HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            789999999999999999999999999999999732    2222222222456889999999999988877521      


Q ss_pred             -----CEEEEcCcCCC--------------------c----hhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           75 -----DVVISTVSRGQ--------------------I----PEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        75 -----d~vi~~a~~~~--------------------~----~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                           .++||++|...                    +    ...+.+++.+++.+..+++++ |+.....     +..+.
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~  151 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----PYFGW  151 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----CCCCc
Confidence                 17889987632                    1    224555555555331356665 4322111     11233


Q ss_pred             cchHHHHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceee---cCCCcceEEeeccchH
Q 039623          125 KSAYADKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI---FGDGNAGAVYNKEDDI  192 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~  192 (292)
                      ..|..+|..++.+.+.         .++++..++||.+-++........     .......   .........+..++|+
T Consensus       152 ~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dv  226 (251)
T PRK06924        152 SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSS-----SKEDFTNLDRFITLKEEGKLLSPEYV  226 (251)
T ss_pred             HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhc-----CcccchHHHHHHHHhhcCCcCCHHHH
Confidence            4455599999888763         257888889998876542211000     0000000   0000001135788999


Q ss_pred             HHHHHHhhcCCc-CCCceEEE
Q 039623          193 ATYTINSIDGPR-TLNKTLYI  212 (292)
Q Consensus       193 a~~~~~~l~~~~-~~~~~~~~  212 (292)
                      |+.++.++.++. ..|+.+.+
T Consensus       227 a~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        227 AKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             HHHHHHHHhcccCCCCCEeeh
Confidence            999999998633 33444443

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.65  E-value=6.1e-15  Score=122.62  Aligned_cols=189  Identities=14%  Similarity=0.088  Sum_probs=119.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+.+.......+.++.+|++|.+++.++++       ++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRD-----PASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999987     444332222223467889999999887766553       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      |++||++|...                   +.++..+++++.+.  . ..+++. ++.+.....     .....|..+|.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~i~~~S~~~~~~~-----~~~~~Y~~sK~  155 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-PASIVLNGSINAHIGM-----PNSSVYAASKA  155 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEechHhccCC-----CCccHHHHHHH
Confidence            99999998632                   45677788887642  2 233443 443222111     12334555999


Q ss_pred             HHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          133 KIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       133 ~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      ..+.+++.       .++++.+++|+.+.+...........  ................-+..++|+|+++..++.+.
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        156 ALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEA--TLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCcc--chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99888853       37899999999887654321100000  00000000000001112357899999999998754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.65  E-value=1.3e-14  Score=121.83  Aligned_cols=201  Identities=15%  Similarity=0.157  Sum_probs=126.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||.+++++|+++|++|+++.|+     .++.+.. +.+.  ..++..+.+|++|.+++.+++.      
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGATIVFNDIN-----QELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            569999999999999999999999999999887     4333222 2222  2358889999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------c----hhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------I----PEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~----~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++||++|...                   +    ...+.++..+++.+ ..++++ |+.......     .+...|
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  159 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGR-----ETVSAY  159 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCC-----CCCccH
Confidence             4899999999743                   1    22334555555555 566766 443222221     123455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..++.+.+.       .|++++.++||.+.+............ ....... ..........+...+|+|..++.+
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFDQFIIAKTPAARWGDPEDLAGPAVFL  238 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHHHHHHhcCCccCCcCHHHHHHHHHHH
Confidence            5599998888764       479999999999976643221110000 0000000 000011122356789999999999


Q ss_pred             hcCC--cCCCceEEEcC
Q 039623          200 IDGP--RTLNKTLYIRP  214 (292)
Q Consensus       200 l~~~--~~~~~~~~~~~  214 (292)
                      +.+.  ...++.+.+.|
T Consensus       239 ~~~~~~~~~g~~~~~~g  255 (265)
T PRK07097        239 ASDASNFVNGHILYVDG  255 (265)
T ss_pred             hCcccCCCCCCEEEECC
Confidence            9863  22455556553

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1e-14  Score=124.21  Aligned_cols=175  Identities=15%  Similarity=0.168  Sum_probs=119.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     .++.+.+. .+.  ...+.++.+|++|.+++.++++      
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~-----~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARR-----EDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     44443322 221  2346789999999998888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ-------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                       .+|++|||||...                         +..++.++..+++.+ ..++|. |+.+.....    .+...
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----~p~~~  190 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEA----SPLFS  190 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC----CCCcc
Confidence             6899999998642                         112334444555666 577776 554322111    11133


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|+.++.+++.       .+++++.++||.+-+.......       ..       .   ....+..+++|+.++.
T Consensus       191 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-------~~-------~---~~~~~~pe~vA~~~~~  253 (293)
T PRK05866        191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-------AY-------D---GLPALTADEAAEWMVT  253 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-------cc-------c---CCCCCCHHHHHHHHHH
Confidence            455599998887664       4789999999877655321100       00       0   0123678999999999


Q ss_pred             hhcCC
Q 039623          199 SIDGP  203 (292)
Q Consensus       199 ~l~~~  203 (292)
                      .+++.
T Consensus       254 ~~~~~  258 (293)
T PRK05866        254 AARTR  258 (293)
T ss_pred             HHhcC
Confidence            99864

>PRK08589 short chain dehydrogenase; Validated

Probab=99.64  E-value=1e-14  Score=122.95  Aligned_cols=200  Identities=13%  Similarity=0.118  Sum_probs=123.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+ .    ...+..+.+.  ..++..+.+|++|++++.++++       
T Consensus         7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-E----AVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-H----HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999997 2    2222223332  2358899999999988877765       


Q ss_pred             cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      .+|++||+||...                        +...+.++..+++.+  .++|+ |+.......     .....|
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~Y  154 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAAD-----LYRSGY  154 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCCC-----CCCchH
Confidence            4799999998642                        122334445554443  45665 443322211     112345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..++.+.+.       .|+++..+.||.+.............. ....... ..........+..++|+|++++.+
T Consensus       155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  233 (272)
T PRK08589        155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSED-EAGKTFRENQKWMTPLGRLGKPEEVAKLVVFL  233 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchh-hHHHHHhhhhhccCCCCCCcCHHHHHHHHHHH
Confidence            5599998888764       478999999999876543221100000 0000000 000000111346789999999999


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +....  ..|+.+.+.|
T Consensus       234 ~s~~~~~~~G~~i~vdg  250 (272)
T PRK08589        234 ASDDSSFITGETIRIDG  250 (272)
T ss_pred             cCchhcCcCCCEEEECC
Confidence            97532  2455666654

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.64  E-value=7.6e-15  Score=123.14  Aligned_cols=201  Identities=13%  Similarity=0.137  Sum_probs=128.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+     .++.+.+. .+   .+.++..+.+|++|++++.++++     
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGADVILLSRN-----EENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence            468999999999999999999999999999998     44433222 22   13468899999999998888775     


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||++|...                       +..++.+++.+++.+ ..++|. |+.......      |....
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~------~~~~~  156 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPI------PNIAL  156 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCC------Ccchh
Confidence             4899999998642                       334667777777666 567776 443322111      23344


Q ss_pred             H-HHHHHHHHHHHH-------cCccEEEEecceeccccccccccC-CC-CCCC-CCceeecCCCcceEEeeccchHHHHH
Q 039623          128 Y-ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQI-GA-PAPP-REKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       128 ~-~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      | .+|..++.+.+.       .|+++..+.||.+........... .. .... ...............+..++|+|.++
T Consensus       157 y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  236 (263)
T PRK08339        157 SNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLV  236 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHH
Confidence            4 499998887764       578999999999876543211000 00 0000 00000000011122456789999999


Q ss_pred             HHhhcCCc--CCCceEEEcC
Q 039623          197 INSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~  214 (292)
                      ..++....  ..|+.+.+.|
T Consensus       237 ~fL~s~~~~~itG~~~~vdg  256 (263)
T PRK08339        237 AFLASDLGSYINGAMIPVDG  256 (263)
T ss_pred             HHHhcchhcCccCceEEECC
Confidence            99997542  2355555553

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.6e-15  Score=122.78  Aligned_cols=199  Identities=10%  Similarity=0.056  Sum_probs=121.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      .++++||||+|+||.+++++|+++|++|+...+++    +++.+.+ +.+.  +..+.++.+|++|.+++.++++     
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRN----RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE   77 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCC----HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH
Confidence            04699999999999999999999999988776542    2222222 2222  3457789999999998888775     


Q ss_pred             --cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-----Cc-ceeec-cCCCCCCccCCccCCC
Q 039623           73 --QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-----NV-KRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 --~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-----~~-~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                        .+|+|||++|...                    +.++..+++++.+.-     .. .++++ |+.+..... .   ..
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~---~~  153 (248)
T PRK06123         78 LGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS-P---GE  153 (248)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC-C---CC
Confidence              5899999998642                    334455555554431     01 23544 443322221 0   00


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+++.       .+++++++||+.+.+.........       ..+..........-..+++|+++++
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~-------~~~~~~~~~~p~~~~~~~~d~a~~~  226 (248)
T PRK06123        154 YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEP-------GRVDRVKAGIPMGRGGTAEEVARAI  226 (248)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCH-------HHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            12455699999887763       379999999999987643211000       0000000000011124679999999


Q ss_pred             HHhhcCCc--CCCceEEEcC
Q 039623          197 INSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~  214 (292)
                      +.++....  ..++.|++.|
T Consensus       227 ~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        227 LWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             HHHhCccccCccCCEEeecC
Confidence            99987642  3466777654

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.4e-14  Score=120.80  Aligned_cols=194  Identities=12%  Similarity=0.073  Sum_probs=123.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||.++++.|.++|++|++++|+     .++.+.+ +.+.  ...+..+.+|+.|.+++.++++      
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK-----LDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            569999999999999999999999999999997     3333222 2222  2346788999999988877664      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHH----HHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQA----KIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~----~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                       ++|++||++|...                    +.+..    .+++.+++.+ ..++++ |+ .+....      .+..
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------~~~~  156 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPG------DFQG  156 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCC------CCCc
Confidence             4899999998531                    22333    4444445554 566665 33 332111      1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+++.       .|++++.+.||.+...+.......      ...............+...+|+|+.+..
T Consensus       157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~~~~  230 (252)
T PRK07035        157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN------DAILKQALAHIPLRRHAEPSEMAGAVLY  230 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC------HHHHHHHHccCCCCCcCCHHHHHHHHHH
Confidence            455599999988874       478999999998876543221110      0000000000011235678999999999


Q ss_pred             hhcCCc--CCCceEEEc
Q 039623          199 SIDGPR--TLNKTLYIR  213 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~  213 (292)
                      ++.+..  ..|+.+.+.
T Consensus       231 l~~~~~~~~~g~~~~~d  247 (252)
T PRK07035        231 LASDASSYTTGECLNVD  247 (252)
T ss_pred             HhCccccCccCCEEEeC
Confidence            997643  245555554

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.4e-14  Score=120.83  Aligned_cols=199  Identities=12%  Similarity=0.092  Sum_probs=123.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|.||+++++.|.++|++|++++|+...   ...+..+.+.  ..++..+.+|++|++++.++++       
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDD---GLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcch---HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            569999999999999999999999999999997421   1112222232  3357889999999988887765       


Q ss_pred             cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ..|++|||+|...                   +.+    .+.++..+++.+ ..++|+ |+....... .  ..+...|.
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-~--~~~~~~Y~  161 (254)
T PRK06114         86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVN-R--GLLQAHYN  161 (254)
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCC-C--CCCcchHH
Confidence            3799999999743                   222    344455555554 456665 332211111 0  01123454


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .|+++.+++||++.+.....   ..   . ...............+..++|++.+++.++.
T Consensus       162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~---~~---~-~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s  234 (254)
T PRK06114        162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR---PE---M-VHQTKLFEEQTPMQRMAKVDEMVGPAVFLLS  234 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc---cc---c-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            599988887764       47899999999886653221   00   0 0000000001111234678999999999997


Q ss_pred             CCc--CCCceEEEcC
Q 039623          202 GPR--TLNKTLYIRP  214 (292)
Q Consensus       202 ~~~--~~~~~~~~~~  214 (292)
                      +..  ..|+++.+.|
T Consensus       235 ~~~~~~tG~~i~~dg  249 (254)
T PRK06114        235 DAASFCTGVDLLVDG  249 (254)
T ss_pred             ccccCcCCceEEECc
Confidence            532  2355666653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.64  E-value=1.6e-14  Score=119.85  Aligned_cols=195  Identities=16%  Similarity=0.178  Sum_probs=123.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      +.++||||+|+||+++++.|.++|++|++..+...   ..+.+.++.+.  ...+..+.+|+.|.+++.++++       
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS---PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999888654321   22222233332  2346677899999988877764       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|+|||++|...                       +..++.+++.+++.+ ..++++ |+.......     .....|.
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~y~  154 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ-----FGQTNYS  154 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCC-----CCChhHH
Confidence            5899999999742                       223455666666666 677776 443221111     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .+++++.++|+.+.+.......        ...............+...+|++.++..++.
T Consensus       155 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~  226 (246)
T PRK12938        155 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR--------PDVLEKIVATIPVRRLGSPDEIGSIVAWLAS  226 (246)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC--------hHHHHHHHhcCCccCCcCHHHHHHHHHHHcC
Confidence            599987776653       5789999999998766432210        0000000011122345678999999999987


Q ss_pred             CCc--CCCceEEEc
Q 039623          202 GPR--TLNKTLYIR  213 (292)
Q Consensus       202 ~~~--~~~~~~~~~  213 (292)
                      .+.  ..+..+.+.
T Consensus       227 ~~~~~~~g~~~~~~  240 (246)
T PRK12938        227 EESGFSTGADFSLN  240 (246)
T ss_pred             cccCCccCcEEEEC
Confidence            642  245555554

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.4e-14  Score=120.88  Aligned_cols=195  Identities=13%  Similarity=0.116  Sum_probs=123.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+     .++.+.+. .+.  ..++..+.+|++|++++.++++      
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEAGAQVAIAARH-----LDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999997     44433322 221  2357889999999988877764      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cC-CCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++||++|...                   +.+...+++++    .+.+.-.++++ |+ .+.....    ......
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----~~~~~~  160 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV----PQQVSH  160 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC----CCCccc
Confidence             6899999998643                   23344444443    33321134554 33 3321111    001234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .|+++..++||.+...........     .. .   .........+...+|+|++++.+
T Consensus       161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~-----~~-~---~~~~~~~~r~~~p~~va~~~~~L  231 (253)
T PRK05867        161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY-----QP-L---WEPKIPLGRLGRPEELAGLYLYL  231 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH-----HH-H---HHhcCCCCCCcCHHHHHHHHHHH
Confidence            55599999888774       478999999999976543211100     00 0   00001112356889999999999


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +....  ..|+.+.+.|
T Consensus       232 ~s~~~~~~tG~~i~vdg  248 (253)
T PRK05867        232 ASEASSYMTGSDIVIDG  248 (253)
T ss_pred             cCcccCCcCCCeEEECC
Confidence            97542  2355666653

>PRK07985 oxidoreductase; Provisional

Probab=99.63  E-value=1.5e-14  Score=123.26  Aligned_cols=199  Identities=12%  Similarity=0.063  Sum_probs=125.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-h--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-K--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++..|+..   .++.+.+... .  ...+.++.+|++|.+++.++++      
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVE---EEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcc---hhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999998877532   2222222222 1  2357789999999988877664      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                       ++|++||++|...                    +.++..+++++.+.- .-.++|+ |+.......     .....|..
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~-----~~~~~Y~a  201 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS-----PHLLDYAA  201 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----CCcchhHH
Confidence             4799999998531                    445566666665421 0145665 443222111     11234555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..++||.+.+.......      ...+....+........+...+|+|.+++.++..
T Consensus       202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~  275 (294)
T PRK07985        202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG------QTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQ  275 (294)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC------CCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCh
Confidence            99998877763       4899999999999876431100      0000000111111122456789999999999976


Q ss_pred             Cc--CCCceEEEcC
Q 039623          203 PR--TLNKTLYIRP  214 (292)
Q Consensus       203 ~~--~~~~~~~~~~  214 (292)
                      ..  ..+..+.+.|
T Consensus       276 ~~~~itG~~i~vdg  289 (294)
T PRK07985        276 ESSYVTAEVHGVCG  289 (294)
T ss_pred             hcCCccccEEeeCC
Confidence            43  2356666654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.63  E-value=8.9e-15  Score=121.75  Aligned_cols=188  Identities=11%  Similarity=0.090  Sum_probs=119.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhhc----CCcEEEECCCCCHHHHHHHHc-----
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFKN----LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~----~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      +|+||||+|+||+++++.|.++|++|++++|+..    ++.+.+. .+..    ..+..+.+|++|.+++.++++     
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDA----AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADA   76 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcc----hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999998732    1222211 1211    123467899999998877764     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||++|...                       +..++.+++++++.+ .+++++ |+.......     .....
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~-----~~~~~  150 (251)
T PRK07069         77 MGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAE-----PDYTA  150 (251)
T ss_pred             cCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCC-----CCCch
Confidence              5799999998653                       125678888888776 677776 443222211     11234


Q ss_pred             hHHHHHHHHHHHHH-------c--CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------E--GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~--~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      |..+|...+.+.+.       .  +++++.++|+.+.+..........   .................+.+++|++++++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~  227 (251)
T PRK07069        151 YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL---GEEEATRKLARGVPLGRLGEPDDVAHAVL  227 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc---cchhHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            55599998887763       2  377888899988776543221110   00000000111111223467899999999


Q ss_pred             HhhcCC
Q 039623          198 NSIDGP  203 (292)
Q Consensus       198 ~~l~~~  203 (292)
                      .++..+
T Consensus       228 ~l~~~~  233 (251)
T PRK07069        228 YLASDE  233 (251)
T ss_pred             HHcCcc
Confidence            988654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.2e-14  Score=121.20  Aligned_cols=194  Identities=13%  Similarity=0.085  Sum_probs=123.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|.||+++++.|.++|++|++++|+.     ++     .....++.++.+|+.|++++.++++       .+
T Consensus         7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~-----~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRA-----PE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCh-----hh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999983     22     1123468899999999998888775       46


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                   +.++..+++++.+    .+...++|+ |+.......     .....|..+
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~~~~~Y~~s  151 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----PGTAAYGAA  151 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----CCCchhHHH
Confidence            99999998643                   3345555555543    211356665 443322221     123445559


Q ss_pred             HHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          131 KIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       131 K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      |..++.+++.      ..+.+..++||.+.+........      .......+........+..++|+|.+++.++....
T Consensus       152 K~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~  225 (252)
T PRK07856        152 KAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG------DAEGIAAVAATVPLGRLATPADIAWACLFLASDLA  225 (252)
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc------CHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9999988874      12677777888876543211100      00000000000111234678999999999997542


Q ss_pred             --CCCceEEEcCCC
Q 039623          205 --TLNKTLYIRPPG  216 (292)
Q Consensus       205 --~~~~~~~~~~~~  216 (292)
                        ..|..+.+.|..
T Consensus       226 ~~i~G~~i~vdgg~  239 (252)
T PRK07856        226 SYVSGANLEVHGGG  239 (252)
T ss_pred             CCccCCEEEECCCc
Confidence              245666776544

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.8e-14  Score=120.69  Aligned_cols=198  Identities=15%  Similarity=0.163  Sum_probs=123.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|.||+++++.|.++|++|++++|+....           ...++.++.+|++|.+++.++++       .+
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999973211           13457889999999988776553       58


Q ss_pred             CEEEEcCcCCC---------------------c----hhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           75 DVVISTVSRGQ---------------------I----PEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        75 d~vi~~a~~~~---------------------~----~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      |+|||+||...                     +    ...+.+++.+++.+ ..++|+ |+.......    ..+...|.
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~----~~~~~~Y~  153 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPL----PESTTAYA  153 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC----CCCcchhH
Confidence            99999998421                     2    22344455555555 566765 443221111    01234555


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccC-CC-CCCCCCce--eec--CCCcceEEeeccchHHHH
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQI-GA-PAPPREKV--TIF--GDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~-~~-~~~~~~~~--~~~--~~~~~~~~~i~v~D~a~~  195 (292)
                      .+|..++.+++.       .++++..++||.+.+......... .. ........  .+.  -.......+..++|+|++
T Consensus       154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~  233 (260)
T PRK06523        154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAEL  233 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHH
Confidence            599998887764       479999999999977643221100 00 00000000  000  000011234578999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +..++.+..  ..|+.+.+.|.
T Consensus       234 ~~~l~s~~~~~~~G~~~~vdgg  255 (260)
T PRK06523        234 IAFLASDRAASITGTEYVIDGG  255 (260)
T ss_pred             HHHHhCcccccccCceEEecCC
Confidence            999997542  34566777653

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.63  E-value=1.9e-14  Score=124.00  Aligned_cols=197  Identities=21%  Similarity=0.267  Sum_probs=130.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-h-hhhcCCcEEEECCCCCHHH-HHHHHc----cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-E-IFKNLGVNVLYGDLQDHES-LIKAIK----QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~v~~v~~D~~d~~~-~~~~~~----~~   74 (292)
                      ++|+|+||||.+|+-+++.|+++|+.|+++.|+     .++.+.+ . ...+.+...+..|...+.+ +..+..    ..
T Consensus        80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd-----~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRD-----EQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CeEEEecCCCchhHHHHHHHHHCCCeeeeeccC-----hhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence            579999999999999999999999999999999     4443222 1 1224455666666555433 333333    24


Q ss_pred             CEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCC--CcchHHHHHHHHHHHH
Q 039623           75 DVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEP--AKSAYADKIKIRRAIE  139 (292)
Q Consensus        75 d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~--~~~~~~~K~~~e~~~~  139 (292)
                      .+++-|++-..            ..+++++++||+..| +++++. ++++...... .+...  ....+..|..+|++++
T Consensus       155 ~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~-~~~~~~~~~~~~~~k~~~e~~~~  232 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQ-PPNILLLNGLVLKAKLKAEKFLQ  232 (411)
T ss_pred             eeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCC-CchhhhhhhhhhHHHHhHHHHHH
Confidence            46666665433            568999999999999 999987 7887665541 11111  1123358899999999


Q ss_pred             HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEE
Q 039623          140 AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLY  211 (292)
Q Consensus       140 ~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  211 (292)
                      +.|+++++||++.+..+........    ..+.+.....  +..--.+.-.|+|+.++.++.++...++.+.
T Consensus       233 ~Sgl~ytiIR~g~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~i~r~~vael~~~all~~~~~~~k~~  298 (411)
T KOG1203|consen  233 DSGLPYTIIRPGGLEQDTGGQREVV----VDDEKELLTV--DGGAYSISRLDVAELVAKALLNEAATFKKVV  298 (411)
T ss_pred             hcCCCcEEEeccccccCCCCcceec----ccCccccccc--cccceeeehhhHHHHHHHHHhhhhhccceeE
Confidence            9999999999988876543322211    1111111111  1111358889999999999988765553333

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.9e-14  Score=124.31  Aligned_cols=181  Identities=19%  Similarity=0.195  Sum_probs=119.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|.||+++++.|.++|++|++++|+     .++.+.+. .+.  ...+.++.+|++|.+++.++++      
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARD-----EEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            469999999999999999999999999999998     44443322 222  3357788999999999888773      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++|||||...                       +..++.++..+++.+ ..++|. ++.+.....     +....|
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~-----p~~~~Y  156 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQ-----PYAAAY  156 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCC-----CCchhH
Confidence             5899999998643                       223334444455554 456665 443322111     112345


Q ss_pred             HHHHHHHHHHHHH--------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA--------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..+..+.+.        .++.++.+.|+.+.+.+.......     .....      .....+.+.+|+|++++.+
T Consensus       157 ~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-----~~~~~------~~~~~~~~pe~vA~~il~~  225 (330)
T PRK06139        157 SASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-----TGRRL------TPPPPVYDPRRVAKAVVRL  225 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-----ccccc------cCCCCCCCHHHHHHHHHHH
Confidence            5599987776653        268888899988876643221110     01000      0112356889999999999


Q ss_pred             hcCCc
Q 039623          200 IDGPR  204 (292)
Q Consensus       200 l~~~~  204 (292)
                      +.+++
T Consensus       226 ~~~~~  230 (330)
T PRK06139        226 ADRPR  230 (330)
T ss_pred             HhCCC
Confidence            98764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.63  E-value=1.1e-14  Score=120.83  Aligned_cols=197  Identities=11%  Similarity=0.084  Sum_probs=118.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |++++||||+|+||++++++|+++|++|+++ .|+     +++.+ ....+.  ..++..+.+|++|++++.++++    
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   75 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQN-----LHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ   75 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC-----hHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            7889999999999999999999999999875 454     33322 112222  2357889999999998888775    


Q ss_pred             ---cCCEEEEcCcCCC--------------------chhHHHHHHHHHH----hC--Ccceeec-cCCCCCCccCCccCC
Q 039623           73 ---QVDVVISTVSRGQ--------------------IPEQAKIIAAVKE----AG--NVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 ---~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~----~~--~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                         ++|+|||++|...                    +.++..+++++..    ..  .-.++|+ |+.+..... .   .
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~-~---~  151 (247)
T PRK09730         76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA-P---G  151 (247)
T ss_pred             hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-C---C
Confidence               4689999999642                    2223233333322    21  1234665 443322221 0   0


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ....|..+|..++.+++.       .+++++++||+.+.++.........       ...............+++|+|++
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~  224 (247)
T PRK09730        152 EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPG-------RVDRVKSNIPMQRGGQPEEVAQA  224 (247)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHH-------HHHHHHhcCCCCCCcCHHHHHHH
Confidence            113455599998877653       4799999999999876432110000       00000000000012378999999


Q ss_pred             HHHhhcCCc--CCCceEEEc
Q 039623          196 TINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~  213 (292)
                      ++.++.+..  ..+..+.+.
T Consensus       225 ~~~~~~~~~~~~~g~~~~~~  244 (247)
T PRK09730        225 IVWLLSDKASYVTGSFIDLA  244 (247)
T ss_pred             HHhhcChhhcCccCcEEecC
Confidence            999987542  234455444

>PRK08264 short chain dehydrogenase; Validated

Probab=99.63  E-value=7e-15  Score=121.47  Aligned_cols=166  Identities=16%  Similarity=0.122  Sum_probs=116.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~v   77 (292)
                      ++|+||||+|++|+++++.|+++|+ +|++++|+.     ++.+.    ...++.++.+|+.|.+++.++++   .+|+|
T Consensus         7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~-----~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP-----ESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh-----hhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            3799999999999999999999998 999999983     33221    24578999999999999988887   48999


Q ss_pred             EEcCcC-CC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           78 ISTVSR-GQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        78 i~~a~~-~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      ||++|. ..                   +.+...+++++.    +.+ ..++++ |+.......     .+...|..+|.
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~-----~~~~~y~~sK~  151 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNF-----PNLGTYSASKA  151 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCC-----CCchHhHHHHH
Confidence            999997 21                   334555555543    344 566775 443221111     12345555999


Q ss_pred             HHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          133 KIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       133 ~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      .++.+.+.       .+++++++||+.+.+.....           .      .    ...+..+|+++.++..+...
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-----------~------~----~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-----------L------D----APKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-----------C------C----cCCCCHHHHHHHHHHHHhCC
Confidence            98877663       37899999998775442110           0      0    01467789999999988754

>PRK09242 tropinone reductase; Provisional

Probab=99.63  E-value=3e-14  Score=119.10  Aligned_cols=196  Identities=10%  Similarity=0.050  Sum_probs=124.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|.||+++++.|.++|++|++++|+     .++.+.+. .+.    +.++.++.+|++|.+++.++++    
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGLGADVLIVARD-----ADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     43332222 221    2457889999999988776664    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++||++|...                   +.+...+++++    ++.+ ..++++ |+.......     .+..
T Consensus        85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~-----~~~~  158 (257)
T PRK09242         85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHV-----RSGA  158 (257)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCC-----CCCc
Confidence               5799999998632                   33444555544    4444 466765 443222111     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+++.       .+++++.++||++.+.........      ..............-+...+|++.++..
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~~~~  232 (257)
T PRK09242        159 PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD------PDYYEQVIERTPMRRVGEPEEVAAAVAF  232 (257)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC------hHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            555599998887763       478999999998876543221100      0000000000111224567999999999


Q ss_pred             hhcCCc--CCCceEEEcC
Q 039623          199 SIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~  214 (292)
                      ++....  ..|+.+.+.|
T Consensus       233 l~~~~~~~~~g~~i~~~g  250 (257)
T PRK09242        233 LCMPAASYITGQCIAVDG  250 (257)
T ss_pred             HhCcccccccCCEEEECC
Confidence            997532  2356666653

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.8e-14  Score=120.16  Aligned_cols=196  Identities=11%  Similarity=0.100  Sum_probs=123.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||++++++|.++|++|++++|+     .++.+.+ +.+.  +.++..+.+|++|.+++.++++      
T Consensus         8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          8 KVALVTGGAAGIGRATALAFAREGAKVVVADRD-----AAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     3332211 2221  3468899999999988887765      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|+|||++|...                    +.+.    +.++..+.+.+ ..++++ |+.+.....     .....
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~-----~~~~~  156 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAA-----PKMSI  156 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCC-----CCCch
Confidence             4699999998632                    1222    33344444444 456665 443222111     12234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..+|..++.+.+.       .++++..+.||.+-..........      .... ..+........+...+|++..++.
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~~ia~~~~~  230 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA------DPRKAEFAAAMHPVGRIGKVEEVASAVLY  230 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc------ChHHHHHHhccCCCCCccCHHHHHHHHHH
Confidence            44499998888764       368899999998866543322110      0000 000000111234678999999999


Q ss_pred             hhcCCc--CCCceEEEcC
Q 039623          199 SIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~  214 (292)
                      ++.+..  ..|+.+.+.|
T Consensus       231 l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        231 LCSDGASFTTGHALMVDG  248 (253)
T ss_pred             HhCccccCcCCcEEEECC
Confidence            997642  2455556653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.62  E-value=2.1e-14  Score=119.61  Aligned_cols=196  Identities=14%  Similarity=0.135  Sum_probs=121.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|.||+++++.|.++|++|++++|+..   ....+.++. ...++.++.+|++|.+++.++++       ++
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA---PETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH---HHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            56999999999999999999999999999888621   111111111 23467889999999999888775       48


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++||+||...                   +.+    ++.+++.+.+.+.-.++|+ |+ .+.....      ....|..
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------~~~~Y~a  158 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI------RVPSYTA  158 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC------CCcchHH
Confidence            99999998643                   223    3344444444331245665 33 2221111      1234555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..++||.+............   ......  .. ......+...+|+|.++..++..
T Consensus       159 sK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~---~~~~~~--~~-~~p~~~~~~peeva~~~~~L~s~  232 (251)
T PRK12481        159 SKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADT---ARNEAI--LE-RIPASRWGTPDDLAGPAIFLSSS  232 (251)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccCh---HHHHHH--Hh-cCCCCCCcCHHHHHHHHHHHhCc
Confidence            99998888763       5899999999988755332211000   000000  00 00112356889999999999975


Q ss_pred             Cc--CCCceEEEc
Q 039623          203 PR--TLNKTLYIR  213 (292)
Q Consensus       203 ~~--~~~~~~~~~  213 (292)
                      ..  ..|+.+.+.
T Consensus       233 ~~~~~~G~~i~vd  245 (251)
T PRK12481        233 ASDYVTGYTLAVD  245 (251)
T ss_pred             cccCcCCceEEEC
Confidence            32  235555554

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.62  E-value=1.4e-14  Score=120.35  Aligned_cols=198  Identities=10%  Similarity=0.080  Sum_probs=118.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |++|+||||+|+||..+++.|+++|++|.++.++.    +++.+.+ ..+.  ..++..+.+|++|.+++.++++     
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARD----AAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA   77 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh
Confidence            35799999999999999999999999998765442    3332222 2221  3468899999999988877664     


Q ss_pred             --cCCEEEEcCcCCC--------------------chhHHHHHHHHHHh-C-----Ccceeec-cCCCCCCccCCccCCC
Q 039623           73 --QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEA-G-----NVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 --~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~-~-----~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                        .+|++||++|...                    +.+...+++++.+. .     .-.++|+ |+.+..... .   ..
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-~---~~  153 (248)
T PRK06947         78 FGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS-P---NE  153 (248)
T ss_pred             cCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-C---CC
Confidence              5899999998642                    22333444332221 1     0123554 433221111 0   01


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+++.       .++++++++||++.+.........       .................++|+++.+
T Consensus       154 ~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~e~va~~~  226 (248)
T PRK06947        154 YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-------GRAARLGAQTPLGRAGEADEVAETI  226 (248)
T ss_pred             CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-------HHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            23466699998877653       479999999999876643210000       0000000000011235789999999


Q ss_pred             HHhhcCCc--CCCceEEEc
Q 039623          197 INSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~  213 (292)
                      +.++.++.  ..|+.+.+.
T Consensus       227 ~~l~~~~~~~~~G~~~~~~  245 (248)
T PRK06947        227 VWLLSDAASYVTGALLDVG  245 (248)
T ss_pred             HHHcCccccCcCCceEeeC
Confidence            99988653  245555554

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.62  E-value=6.3e-15  Score=123.43  Aligned_cols=195  Identities=17%  Similarity=0.135  Sum_probs=121.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|.||+++++.|+++|++|+++.|+.    .++.+.+ +.+   ....+.++.+|++|++++.++++     
T Consensus         9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSN----VEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            5799999999999999999999999998887642    2332221 222   13467899999999988877775     


Q ss_pred             --cCCEEEEcCcCC---------C--------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCcc
Q 039623           73 --QVDVVISTVSRG---------Q--------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        73 --~~d~vi~~a~~~---------~--------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                        ++|++||+||..         .                    +..++.++..+++.+ ..++|+ |+.+.....    
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  159 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYI----  159 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCC----
Confidence              479999999742         1                    122344444555444 456776 443322111    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~  192 (292)
                       +....|..+|..++.+.+.       .|+++..+.||.+-......+..       ..... ..........+..++|+
T Consensus       160 -~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-------~~~~~~~~~~~~~~~r~~~p~~v  231 (260)
T PRK08416        160 -ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-------YEEVKAKTEELSPLNRMGQPEDL  231 (260)
T ss_pred             -CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-------CHHHHHHHHhcCCCCCCCCHHHH
Confidence             1123455599999888764       47899999998886553211110       00000 00000111235688999


Q ss_pred             HHHHHHhhcCCc-C-CCceEEEc
Q 039623          193 ATYTINSIDGPR-T-LNKTLYIR  213 (292)
Q Consensus       193 a~~~~~~l~~~~-~-~~~~~~~~  213 (292)
                      |.+++.++.... . .|+.+.+.
T Consensus       232 a~~~~~l~~~~~~~~~G~~i~vd  254 (260)
T PRK08416        232 AGACLFLCSEKASWLTGQTIVVD  254 (260)
T ss_pred             HHHHHHHcChhhhcccCcEEEEc
Confidence            999999997542 2 35555554

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.62  E-value=2e-14  Score=119.99  Aligned_cols=195  Identities=13%  Similarity=0.126  Sum_probs=120.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||.+++++|.++|++|++++|+     ..+.+....  ..+..++.+|++|.+++.++++       ++
T Consensus         8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          8 RVAVITGGGSGIGLATARRLAAEGATVVVGDID-----PEAGKAAAD--EVGGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--HcCCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999997     333322211  1133688999999998888775       47


Q ss_pred             CEEEEcCcCCC---------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           75 DVVISTVSRGQ---------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        75 d~vi~~a~~~~---------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      |+|||++|...                     +.    .++.++..+++.+ ..+++. |+.......    ..+...|.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~----~~~~~~Y~  155 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGS----ATSQISYT  155 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCC----CCCCcchH
Confidence            99999998531                     11    2333444444444 455554 432211111    01123455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|+.++.+.+.       .+++++.++||.+.+........... ....+.....+    ...+.+++|+++++..++.
T Consensus       156 ~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~a~~~~~l~~  230 (255)
T PRK06057        156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDP-ERAARRLVHVP----MGRFAEPEEIAAAVAFLAS  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCH-HHHHHHHhcCC----CCCCcCHHHHHHHHHHHhC
Confidence            599876666552       47999999999997664332211000 00000000111    1246889999999998887


Q ss_pred             CCc--CCCceEEEc
Q 039623          202 GPR--TLNKTLYIR  213 (292)
Q Consensus       202 ~~~--~~~~~~~~~  213 (292)
                      +..  ..+..+.+.
T Consensus       231 ~~~~~~~g~~~~~~  244 (255)
T PRK06057        231 DDASFITASTFLVD  244 (255)
T ss_pred             ccccCccCcEEEEC
Confidence            542  234555554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.62  E-value=1.8e-14  Score=118.92  Aligned_cols=192  Identities=14%  Similarity=0.158  Sum_probs=120.9

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      |+|||++|+||+++++.|.++|++|++++|+..    ++.+ ....+.  ...+.++.+|++|.+++.+++.       .
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE----EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGP   76 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCch----hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999998742    1111 112222  2247889999999998888775       4


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|.|||++|...                   +.++..+++++.+    .+ .+++++ |+.+.....     .....|..
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~-----~~~~~y~~  150 (239)
T TIGR01830        77 IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGN-----AGQANYAA  150 (239)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCC-----CCCchhHH
Confidence            799999999742                   3445566666654    33 457776 443322221     11234445


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|...+.+++.       .++++++++|+.+.+.........    ...   .... ......+.+++|++++++.++..
T Consensus       151 ~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~----~~~---~~~~-~~~~~~~~~~~~~a~~~~~~~~~  222 (239)
T TIGR01830       151 SKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEK----VKK---KILS-QIPLGRFGTPEEVANAVAFLASD  222 (239)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChH----HHH---HHHh-cCCcCCCcCHHHHHHHHHHHhCc
Confidence            99887766543       478999999988755422111000    000   0000 01112356789999999998855


Q ss_pred             Cc--CCCceEEEc
Q 039623          203 PR--TLNKTLYIR  213 (292)
Q Consensus       203 ~~--~~~~~~~~~  213 (292)
                      ..  ..+++|++.
T Consensus       223 ~~~~~~g~~~~~~  235 (239)
T TIGR01830       223 EASYITGQVIHVD  235 (239)
T ss_pred             ccCCcCCCEEEeC
Confidence            32  345666664

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3.4e-14  Score=118.07  Aligned_cols=173  Identities=14%  Similarity=0.133  Sum_probs=116.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+.. +.    ..++.++.+|++|.+++.++++    
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARR-----TDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD   77 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence            679999999999999999999999999999998     444332221 11    3468889999999988877664    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++||++|...                   +.+...++++    +++.+ .+++|+ |+.+.....    ..+..
T Consensus        78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----~~~~~  152 (248)
T PRK08251         78 ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGL----PGVKA  152 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCC----CCCcc
Confidence               5899999998543                   2233334443    44555 567766 443322221    01234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .+++++.++|+++.+......         +.          ....++.+|.|+.++.
T Consensus       153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---------~~----------~~~~~~~~~~a~~i~~  213 (248)
T PRK08251        153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA---------KS----------TPFMVDTETGVKALVK  213 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc---------cc----------CCccCCHHHHHHHHHH
Confidence            555599998877653       368889999998865532110         00          0124678999999999


Q ss_pred             hhcCC
Q 039623          199 SIDGP  203 (292)
Q Consensus       199 ~l~~~  203 (292)
                      .+++.
T Consensus       214 ~~~~~  218 (248)
T PRK08251        214 AIEKE  218 (248)
T ss_pred             HHhcC
Confidence            99764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.61  E-value=4.1e-14  Score=118.17  Aligned_cols=196  Identities=13%  Similarity=0.093  Sum_probs=125.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     .++.+.+ ..+.  ..++.++.+|++|.+++.++++      
T Consensus        12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113         12 KCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999887     3333222 2222  2357788999999998877654      


Q ss_pred             -cCCEEEEcCcCCC------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       ++|++||++|...                  +.++..+++++.    +.+ ..++|+ |+.......     .+...|.
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~  160 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN-----INMTSYA  160 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC-----CCcchhH
Confidence             4799999998632                  345555666654    333 346665 443222111     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+++.       .++++..+.||.+...........       +.............+..++|++++++.++.
T Consensus       161 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~  233 (255)
T PRK06113        161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP-------EIEQKMLQHTPIRRLGQPQDIANAALFLCS  233 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCH-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            599999888864       468888889988875532211000       000000000111235688999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      ...  ..|+.+.+.|.
T Consensus       234 ~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        234 PAASWVSGQILTVSGG  249 (255)
T ss_pred             ccccCccCCEEEECCC
Confidence            542  23666777653

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.61  E-value=4.3e-14  Score=116.95  Aligned_cols=195  Identities=17%  Similarity=0.186  Sum_probs=122.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhh--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIF--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|+||+++++.|+++|++|+++.|..    +++.+. ....  ...++.++.+|++|++++.++++      
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPN----EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL   76 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999998832    222221 1112  13468899999999988877664      


Q ss_pred             -cCCEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|+|||++|...                   +.    ..+.++..+++.+ .+++++ |+.......     .....|
T Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~-----~~~~~y  150 (242)
T TIGR01829        77 GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQ-----FGQTNY  150 (242)
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC-----CCcchh
Confidence             4899999998642                   12    2344556666666 677776 443222221     112334


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+++.       .+++++.++|+.+.+.........        ....+........+...+|+++++..++
T Consensus       151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~~~~l~  222 (242)
T TIGR01829       151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRED--------VLNSIVAQIPVGRLGRPEEIAAAVAFLA  222 (242)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            4499877766553       478999999999876543211100        0000000011122356689999998888


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      .++.  ..|+.+.+.|
T Consensus       223 ~~~~~~~~G~~~~~~g  238 (242)
T TIGR01829       223 SEEAGYITGATLSING  238 (242)
T ss_pred             CchhcCccCCEEEecC
Confidence            6542  3466666653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.4e-14  Score=120.04  Aligned_cols=144  Identities=13%  Similarity=0.131  Sum_probs=101.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--------   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--------   72 (292)
                      ||+++||||||+||++++++|+++|++|++++|+..     +.  +......++.++.+|++|.+++.+++.        
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~-----~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   73 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH-----PS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV   73 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc-----hh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence            899999999999999999999999999999999742     11  111123468889999999988877432        


Q ss_pred             ---cCCEEEEcCcCCC--------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ--------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~--------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                         +.|++||++|...                    +.+    ++.+++.+.+.+ .+++|+ |+.+....     ..+.
T Consensus        74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~  147 (243)
T PRK07023         74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNA-----YAGW  147 (243)
T ss_pred             cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCC-----CCCc
Confidence               4789999998632                    223    444555555444 567776 54432211     1223


Q ss_pred             cchHHHHHHHHHHHHH------cCccEEEEecceecccc
Q 039623          125 KSAYADKIKIRRAIEA------EGIQYTYVSCNCFAGYF  157 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~  157 (292)
                      ..|..+|..++.+++.      .++++..++||.+-+..
T Consensus       148 ~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  186 (243)
T PRK07023        148 SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM  186 (243)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence            4455599999998873      37888889998886543

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.60  E-value=4.7e-14  Score=117.90  Aligned_cols=195  Identities=11%  Similarity=0.094  Sum_probs=122.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|.++|++|++++|+     .++.+.+.. +.  ..++.++.+|+++.+++.++++      
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRR-----VERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999998     555433322 11  2468899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCC-------cceeec-cCCCCCCccCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGN-------VKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~-------~~~~i~-s~~g~~~~~~~~~  120 (292)
                       .+|++||++|...                   +.+...+++++.    +...       ..++++ |+.+....     
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----  159 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV-----  159 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC-----
Confidence             5899999999532                   233444444443    2210       135554 33221111     


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                      ......|..+|...+.+++.       .++++++++||.+.+.........    .....  .... -....+...+|++
T Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~--~~~~-~~~~~~~~p~~~~  232 (258)
T PRK06949        160 LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET----EQGQK--LVSM-LPRKRVGKPEDLD  232 (258)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh----HHHHH--HHhc-CCCCCCcCHHHHH
Confidence            11234555599988887764       479999999999876643211000    00000  0000 0012345679999


Q ss_pred             HHHHHhhcCCc--CCCceEEEc
Q 039623          194 TYTINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       194 ~~~~~~l~~~~--~~~~~~~~~  213 (292)
                      +++..++....  ..|..+.+.
T Consensus       233 ~~~~~l~~~~~~~~~G~~i~~d  254 (258)
T PRK06949        233 GLLLLLAADESQFINGAIISAD  254 (258)
T ss_pred             HHHHHHhChhhcCCCCcEEEeC
Confidence            99999987532  234444443

>TIGR02415 23BDH acetoin reductases

Probab=99.60  E-value=2.4e-14  Score=119.41  Aligned_cols=192  Identities=14%  Similarity=0.126  Sum_probs=118.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||.++++.|++.|++|+++.|+     .++.+ ..+.+.  ..++.++.+|++|++++.++++      
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   75 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLN-----EETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF   75 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999987     33222 222222  3357889999999998887764      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHH----HHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQA----KIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~----~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|+|||++|...                   +.++.    .+++.+++.+...++++ |+.......     +....|
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y  150 (254)
T TIGR02415        76 GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----PILSAY  150 (254)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----CCCcch
Confidence             4799999998642                   22233    33444444431246665 443222221     123455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc----eeecCCCcceEEeeccchHHHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK----VTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ..+|..++.+++.       .++.+..++|+++.+.......... .......    ...+........+.+++|+++++
T Consensus       151 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  229 (254)
T TIGR02415       151 SSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEET-SEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLV  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhh-hhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence            5599998888763       3688999999988655322211100 0000000    00000001112367889999999


Q ss_pred             HHhhcCCc
Q 039623          197 INSIDGPR  204 (292)
Q Consensus       197 ~~~l~~~~  204 (292)
                      ..++....
T Consensus       230 ~~l~~~~~  237 (254)
T TIGR02415       230 SFLASEDS  237 (254)
T ss_pred             Hhhccccc
Confidence            99998753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.60  E-value=9.4e-14  Score=114.59  Aligned_cols=191  Identities=11%  Similarity=0.124  Sum_probs=117.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|.||+++++.|.++|++|++++|+..     +.  .+.+...++.++.+|++|.+++.++++       ++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY-----PA--IDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch-----hH--HHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            57999999999999999999999999999999742     11  122333467899999999988877664       48


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++||++|...                   +.+    ++.+++.+++.+ ...++++ |+.......     .....|..
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----~~~~~Y~a  150 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS-----DKHIAYAA  150 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC-----CCCccHHH
Confidence            99999998642                   122    233444443332 0235555 443222111     12334555


Q ss_pred             HHHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          130 DKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       130 ~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      +|..++.+.+.      .++++..|+||.+........ ..     ..   .... .....-+...+|+++++..++...
T Consensus       151 sKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~-~~-----~~---~~~~-~~~~~~~~~~~~va~~~~~l~~~~  220 (236)
T PRK06483        151 SKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDA-AY-----RQ---KALA-KSLLKIEPGEEEIIDLVDYLLTSC  220 (236)
T ss_pred             HHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCH-HH-----HH---HHhc-cCccccCCCHHHHHHHHHHHhcCC
Confidence            99999998874      247788888887742211000 00     00   0000 000112346799999999999754


Q ss_pred             cCCCceEEEcC
Q 039623          204 RTLNKTLYIRP  214 (292)
Q Consensus       204 ~~~~~~~~~~~  214 (292)
                      ...|..+.+.|
T Consensus       221 ~~~G~~i~vdg  231 (236)
T PRK06483        221 YVTGRSLPVDG  231 (236)
T ss_pred             CcCCcEEEeCc
Confidence            34456666653

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.60  E-value=5.1e-14  Score=115.35  Aligned_cols=146  Identities=14%  Similarity=0.102  Sum_probs=101.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-----cCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-----QVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-----~~d   75 (292)
                      |++|+||||+|++|+++++.|.++|++|++++|+.     ++.+.+..  ..++.++.+|++|.+++.++++     ++|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~id   73 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGP-----QQDTALQA--LPGVHIEKLDMNDPASLDQLLQRLQGQRFD   73 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC-----cchHHHHh--ccccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence            78999999999999999999999999999999983     33333332  2467888999999988887776     489


Q ss_pred             EEEEcCcCCC---------------------chhHHHHHHHHHHhC--Ccceeec--cCCCCCCccCCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ---------------------IPEQAKIIAAVKEAG--NVKRFLP--SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~---------------------~~~~~~l~~a~~~~~--~~~~~i~--s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      +|||++|...                     +.+...+++++.+.-  ....+++  |.+|.....   +......|..+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~---~~~~~~~Y~~s  150 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELP---DGGEMPLYKAS  150 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccC---CCCCccchHHH
Confidence            9999998642                     334555555554321  0234443  445433211   11122345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccc
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGY  156 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~  156 (292)
                      |..++.+++.       .++.+..++||++...
T Consensus       151 K~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        151 KAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            9999988874       3577888889888655

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=6.8e-14  Score=116.50  Aligned_cols=195  Identities=13%  Similarity=0.099  Sum_probs=122.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||..+++.|+++|++|++++|+     .++.+.. +.+.  ...+..+.+|++|.+++.++++      
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN-----QEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999987     3333222 2121  3457889999999888776664      


Q ss_pred             -cCCEEEEcCcCCC----------------------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCC
Q 039623           73 -QVDVVISTVSRGQ----------------------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQ  118 (292)
Q Consensus        73 -~~d~vi~~a~~~~----------------------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~  118 (292)
                       ++|+|||++|...                            +.+.    +.++..+.+...-..+++ |+.+.. ..  
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-~~--  157 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-GN--  157 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-CC--
Confidence             3799999998421                            1122    223333333321234554 433211 11  


Q ss_pred             ccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccch
Q 039623          119 NVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDD  191 (292)
Q Consensus       119 ~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (292)
                         .+...|..+|..++.+++.       .+++++.++|+.+.+.......        ......+........+.+++|
T Consensus       158 ---~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  226 (253)
T PRK08217        158 ---MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK--------PEALERLEKMIPVGRLGEPEE  226 (253)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--------HHHHHHHHhcCCcCCCcCHHH
Confidence               1234455599998887653       4799999999998765321110        000000111112234568899


Q ss_pred             HHHHHHHhhcCCcCCCceEEEcCC
Q 039623          192 IATYTINSIDGPRTLNKTLYIRPP  215 (292)
Q Consensus       192 ~a~~~~~~l~~~~~~~~~~~~~~~  215 (292)
                      +++++..++......|+++++.|.
T Consensus       227 ~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        227 IAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             HHHHHHHHHcCCCcCCcEEEeCCC
Confidence            999999999765446778887653

>PRK12742 oxidoreductase; Provisional

Probab=99.59  E-value=8.5e-14  Score=114.86  Aligned_cols=192  Identities=14%  Similarity=0.144  Sum_probs=119.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      ++|+||||+|.||+++++.|.++|++|+++.|+.    .++.+.+.  ...++..+.+|++|.+++.++++   ++|++|
T Consensus         7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~l~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS----KDAAERLA--QETGATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC----HHHHHHHH--HHhCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            5799999999999999999999999998877642    23332221  12357788999999988887775   489999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHHHHh-CCcceeec-cC-CCCCCccCCccCCCCcchHHHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAVKEA-GNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~~~~-~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      |++|...                   +.+...++..+.+. ..-.++|+ |+ .+...     +..+...|..+|..++.
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~~Y~~sKaa~~~  155 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM-----PVAGMAAYAASKSALQG  155 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC-----CCCCCcchHHhHHHHHH
Confidence            9998643                   22334444443332 11245655 43 33111     11234456669999988


Q ss_pred             HHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CCC
Q 039623          137 AIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TLN  207 (292)
Q Consensus       137 ~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~  207 (292)
                      +++.       .+++++.++||.+.....+.....      . .  ..........+...+|+++++..++....  ..|
T Consensus       156 ~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~------~-~--~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G  226 (237)
T PRK12742        156 MARGLARDFGPRGITINVVQPGPIDTDANPANGPM------K-D--MMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTG  226 (237)
T ss_pred             HHHHHHHHHhhhCeEEEEEecCcccCCccccccHH------H-H--HHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccC
Confidence            8763       478999999998876532211000      0 0  00000011234678999999999987542  234


Q ss_pred             ceEEEc
Q 039623          208 KTLYIR  213 (292)
Q Consensus       208 ~~~~~~  213 (292)
                      ..+.+.
T Consensus       227 ~~~~~d  232 (237)
T PRK12742        227 AMHTID  232 (237)
T ss_pred             CEEEeC
Confidence            555554

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.59  E-value=8.6e-14  Score=116.77  Aligned_cols=178  Identities=19%  Similarity=0.218  Sum_probs=116.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~------~   73 (292)
                      ++++||||+|+||.++++.|+++|++|++++|+     +++.+.+...  ...++.++.+|++|.+++.++++      .
T Consensus         6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRN-----AEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGG   80 (263)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCC
Confidence            569999999999999999999999999999998     4443322211  13468899999999988877664      5


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec--cCCCCCCccCCccCCCCcchH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP--SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      +|++||++|...                   +.++..+++++.    +.+ ..+++.  |..+.....      ....|.
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------~~~~Y~  153 (263)
T PRK09072         81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYP------GYASYC  153 (263)
T ss_pred             CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCC------CccHHH
Confidence            799999998743                   334445555543    333 355554  333321111      123444


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+++.       .+++++.+.|+.+.+.........    . ...   .     ......++|+|+.++.+++
T Consensus       154 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~----~-~~~---~-----~~~~~~~~~va~~i~~~~~  220 (263)
T PRK09072        154 ASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA----L-NRA---L-----GNAMDDPEDVAAAVLQAIE  220 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc----c-ccc---c-----cCCCCCHHHHHHHHHHHHh
Confidence            599988776653       468888888987765432111000    0 000   0     1134678999999999998


Q ss_pred             CCc
Q 039623          202 GPR  204 (292)
Q Consensus       202 ~~~  204 (292)
                      +..
T Consensus       221 ~~~  223 (263)
T PRK09072        221 KER  223 (263)
T ss_pred             CCC
Confidence            753

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.59  E-value=7.1e-15  Score=115.39  Aligned_cols=225  Identities=15%  Similarity=0.105  Sum_probs=154.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      .+|||||+-|.+|..+++.|... |. .|+..+-...+   ...       -.+-.++..|+.|...+.+++-  .+|++
T Consensus        45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp---~~V-------~~~GPyIy~DILD~K~L~eIVVn~RIdWL  114 (366)
T KOG2774|consen   45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP---ANV-------TDVGPYIYLDILDQKSLEEIVVNKRIDWL  114 (366)
T ss_pred             CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc---hhh-------cccCCchhhhhhccccHHHhhccccccee
Confidence            37999999999999999988776 64 45554433211   111       2345678899999988888875  69999


Q ss_pred             EEcCcCCC--------------chhHHHHHHHHHHhCCcceeeccCCCCCCccCCccC-------CCCcchHHHHHHHHH
Q 039623           78 ISTVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVV-------EPAKSAYADKIKIRR  136 (292)
Q Consensus        78 i~~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~-------~~~~~~~~~K~~~e~  136 (292)
                      ||..+.-+              +.+..++++.|++++ ++.|++|..|.........+       .|..-|+-||..+|.
T Consensus       115 ~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL  193 (366)
T KOG2774|consen  115 VHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAEL  193 (366)
T ss_pred             eeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHH
Confidence            99865432              789999999999998 99999987765433211111       122234449987765


Q ss_pred             HHH----HcCccEEEEe-cceecc-----ccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--
Q 039623          137 AIE----AEGIQYTYVS-CNCFAG-----YFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--  204 (292)
Q Consensus       137 ~~~----~~~~~~~~ir-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--  204 (292)
                      +-+    ..|+++-.+| |+.+..     ............+.++++-..+-..+....+.+.+|+-++++.++..+.  
T Consensus       194 ~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~  273 (366)
T KOG2774|consen  194 LGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS  273 (366)
T ss_pred             HHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH
Confidence            544    4789999998 655532     1111111111122556666667667888899999999999999987653  


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhC-CCccee
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIG-KTLEKT  239 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~-~~~~~~  239 (292)
                      -..++||+.  +..+|.+|+++.+.+... ..+.+.
T Consensus       274 lkrr~ynvt--~~sftpee~~~~~~~~~p~~~i~y~  307 (366)
T KOG2774|consen  274 LKRRTYNVT--GFSFTPEEIADAIRRVMPGFEIDYD  307 (366)
T ss_pred             hhhheeeec--eeccCHHHHHHHHHhhCCCceeecc
Confidence            346789987  458999999999988753 344433

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.59  E-value=6.9e-14  Score=116.56  Aligned_cols=198  Identities=12%  Similarity=0.050  Sum_probs=120.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||++++++|.++|++|.+..++.    .++.+ ....+.  ...+..+.+|++|.+++..+++      
T Consensus         5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNR----KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999998875432    22222 112221  2346778899999776654332      


Q ss_pred             -------cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCC
Q 039623           73 -------QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 -------~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                             ++|++||+||...                   +.++..+++++.+.- .-.++|+ |+.......     ...
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  155 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-----PDF  155 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC-----CCc
Confidence                   5899999999643                   334555555554431 0246665 443222111     123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|+.++.+++.       .++++..+.||++.+.........    .....  ..........+.+++|+|+++.
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~dva~~~~  229 (252)
T PRK12747        156 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD----PMMKQ--YATTISAFNRLGEVEDIADTAA  229 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC----HHHHH--HHHhcCcccCCCCHHHHHHHHH
Confidence            3455599999888764       479999999998876643211100    00000  0000011234678999999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..|..+.+.|
T Consensus       230 ~l~s~~~~~~~G~~i~vdg  248 (252)
T PRK12747        230 FLASPDSRWVTGQLIDVSG  248 (252)
T ss_pred             HHcCccccCcCCcEEEecC
Confidence            9987532  2355566653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.59  E-value=1.4e-13  Score=115.53  Aligned_cols=201  Identities=12%  Similarity=0.030  Sum_probs=122.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+......++.++.+|++|.+++.++++       .+
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLERS-----AEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998     545444333334568899999999988877764       58


Q ss_pred             CEEEEcCcCCC------------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           75 DVVISTVSRGQ------------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        75 d~vi~~a~~~~------------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                      |++||++|...                        +.+...+++++.    +.+  .++|. ++.......     ....
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~-----~~~~  154 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--GSMIFTLSNSSFYPG-----GGGP  154 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC--CEEEEECChhhcCCC-----CCCc
Confidence            99999999632                        122333344443    222  34554 332221111     1123


Q ss_pred             chHHHHHHHHHHHHH------cCccEEEEecceeccccccccc-cCCCCCCCCCc--eeecCCCcceEEeeccchHHHHH
Q 039623          126 SAYADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLA-QIGAPAPPREK--VTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      .|..+|..++.+.+.      .++++..+.||.+......... ..........+  ............+...+|+|.++
T Consensus       155 ~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~  234 (263)
T PRK06200        155 LYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPY  234 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhh
Confidence            455599999888874      2478888888888654321110 00000000000  00011111123467889999999


Q ss_pred             HHhhcCC-c--CCCceEEEcC
Q 039623          197 INSIDGP-R--TLNKTLYIRP  214 (292)
Q Consensus       197 ~~~l~~~-~--~~~~~~~~~~  214 (292)
                      +.++... .  ..|+.+.+.|
T Consensus       235 ~fl~s~~~~~~itG~~i~vdg  255 (263)
T PRK06200        235 VLLASRRNSRALTGVVINADG  255 (263)
T ss_pred             hheecccccCcccceEEEEcC
Confidence            9999754 2  2355555543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.58  E-value=1.3e-13  Score=116.63  Aligned_cols=201  Identities=15%  Similarity=0.127  Sum_probs=125.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .++.+.+ +.+.  ..++..+.+|+.|.+++.++++      
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRN-----QEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999997     3333222 2222  2357889999999988877664      


Q ss_pred             -cCCEEEEcCcCCC--------------------------------------chhHHHHHHHHHHhCCcceeec-cCCCC
Q 039623           73 -QVDVVISTVSRGQ--------------------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGN  112 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~  112 (292)
                       ++|++||++|...                                      +...+.+++.+++.+ ..++|+ |+...
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~  164 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNA  164 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchh
Confidence             5899999998421                                      112234455555555 466766 43322


Q ss_pred             CCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEE
Q 039623          113 DVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAV  185 (292)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (292)
                      ...     ......|..+|..++.+++.       .++++..++||++.+.....+...... .................
T Consensus       165 ~~~-----~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~p~~r  238 (278)
T PRK08277        165 FTP-----LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG-SLTERANKILAHTPMGR  238 (278)
T ss_pred             cCC-----CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc-cchhHHHHHhccCCccC
Confidence            211     11233455599999888764       478999999999876643221110000 00000000001111234


Q ss_pred             eeccchHHHHHHHhhcC-Cc--CCCceEEEcC
Q 039623          186 YNKEDDIATYTINSIDG-PR--TLNKTLYIRP  214 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~-~~--~~~~~~~~~~  214 (292)
                      +...+|+|++++.++.. ..  ..|..+.+.|
T Consensus       239 ~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg  270 (278)
T PRK08277        239 FGKPEELLGTLLWLADEKASSFVTGVVLPVDG  270 (278)
T ss_pred             CCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence            56789999999999876 32  2355666653

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.1e-13  Score=116.20  Aligned_cols=202  Identities=11%  Similarity=0.109  Sum_probs=123.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+     +++.+.. +.+.    ..++..+.+|++|.+++.++++    
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRD-----EERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999998     4433222 1221    2357789999999988877664    


Q ss_pred             ---cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         .+|++||+||...                       +..++.++..+++.+ ..++++ |+.......     ....
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~  157 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPE-----PHMV  157 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCC-----CCch
Confidence               4799999999643                       223455556666554 456665 443222111     1123


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceecccccccccc-CCCCCCCCCce-e-e-cCCCcceEEeeccchHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ-IGAPAPPREKV-T-I-FGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~-~~~~~~~~~~i~v~D~a~  194 (292)
                      .|..+|..++.+.+.       .|++++.++||++.......... ........... . + ....-....+...+|+|.
T Consensus       158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~  237 (265)
T PRK07062        158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAAR  237 (265)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHH
Confidence            444499987776653       57899999999987653321110 00000000000 0 0 000011123567899999


Q ss_pred             HHHHhhcCCc--CCCceEEEcC
Q 039623          195 YTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +++.++....  ..|+.+.+.|
T Consensus       238 ~~~~L~s~~~~~~tG~~i~vdg  259 (265)
T PRK07062        238 ALFFLASPLSSYTTGSHIDVSG  259 (265)
T ss_pred             HHHHHhCchhcccccceEEEcC
Confidence            9999987532  2355565543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.58  E-value=1.1e-13  Score=130.09  Aligned_cols=203  Identities=14%  Similarity=0.097  Sum_probs=124.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.    ...+..+.+|++|.+++.++++    
T Consensus       415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~-----~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLN-----LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     43332221 111    1246789999999999888776    


Q ss_pred             ---cCCEEEEcCcCCC-------------------c----hhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------I----PEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~----~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++|||||...                   +    ...+.++..+++.+.-.++|+ |+.......     ....
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-----~~~~  564 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-----KNAS  564 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-----CCCH
Confidence               5899999999643                   1    122344455554431235665 443222111     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceec-cc-cccc-cccCCCC--CCCCCc-eeecCCCcceEEeeccchH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFA-GY-FLPT-LAQIGAP--APPREK-VTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~-~~-~~~~-~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~v~D~  192 (292)
                      .|..+|..++.+++.       .|+++..++|+.+. +. .... .......  ...... ...+........+++.+|+
T Consensus       565 aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDV  644 (676)
T TIGR02632       565 AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADI  644 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHH
Confidence            455599999888764       47889999998775 21 1111 0000000  000000 0112222233456899999


Q ss_pred             HHHHHHhhcCC--cCCCceEEEcC
Q 039623          193 ATYTINSIDGP--RTLNKTLYIRP  214 (292)
Q Consensus       193 a~~~~~~l~~~--~~~~~~~~~~~  214 (292)
                      |+++..++...  ...|.++++.|
T Consensus       645 A~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       645 AEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             HHHHHHHhCCcccCCcCcEEEECC
Confidence            99999998653  23366677654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.58  E-value=3.7e-14  Score=119.58  Aligned_cols=190  Identities=14%  Similarity=0.095  Sum_probs=116.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh---cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK---NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~---~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+|.||.++++.|.++|++|++++|+     +++.+.+ +.+.   ...+.++.+|++|++++.++++     
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRD-----ADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAA   75 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999987     3333222 2222   1224567899999988776654     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||++|...                   +.++..+++++.    +.+...++++ |+.......     .....
T Consensus        76 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----~~~~~  150 (272)
T PRK07832         76 HGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-----PWHAA  150 (272)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-----CCCcc
Confidence              4799999998643                   334444555543    3221356665 443221111     11234


Q ss_pred             hHHHHHHHHHHHH-------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIE-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+       ..++++++++||.+.+........... ........... .......+..+|+|++++.+
T Consensus       151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~vA~~~~~~  228 (272)
T PRK07832        151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGV-DREDPRVQKWV-DRFRGHAVTPEKAAEKILAG  228 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhccccccc-CcchhhHHHHH-HhcccCCCCHHHHHHHHHHH
Confidence            5559987776664       257999999999998765432210000 00000000000 00112347899999999999


Q ss_pred             hcCC
Q 039623          200 IDGP  203 (292)
Q Consensus       200 l~~~  203 (292)
                      +.++
T Consensus       229 ~~~~  232 (272)
T PRK07832        229 VEKN  232 (272)
T ss_pred             HhcC
Confidence            9643

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.58  E-value=9.7e-14  Score=116.36  Aligned_cols=194  Identities=12%  Similarity=0.096  Sum_probs=121.0

Q ss_pred             ceEEEEccCC-cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTG-YIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      ++++||||+| .||+++++.|.++|++|++.+|+     .++.+.. +.+.    ..++..+.+|++|++++.++++   
T Consensus        18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIH-----ERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            5799999997 69999999999999999999887     3333222 2221    1357889999999988877764   


Q ss_pred             ----cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec--cCCCCCCccCCccCCC
Q 039623           73 ----QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP--SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ----~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~--s~~g~~~~~~~~~~~~  123 (292)
                          .+|++||++|...                   +.+...++++    +++.+.-.+++.  |..+....      .+
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------~~  166 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ------HG  166 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC------CC
Confidence                5799999999642                   2233333333    333321234554  33332211      12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+.+.       .++++..++|+.+..........       .+....+........+...+|+|+++
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~r~~~p~~va~~~  239 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS-------AELLDELAAREAFGRAAEPWEVANVI  239 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC-------HHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            33455599999988773       47899999999887664321100       00000000111122356789999999


Q ss_pred             HHhhcCCc--CCCceEEEc
Q 039623          197 INSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~  213 (292)
                      +.++....  ..|+.+.+.
T Consensus       240 ~~l~s~~~~~itG~~i~v~  258 (262)
T PRK07831        240 AFLASDYSSYLTGEVVSVS  258 (262)
T ss_pred             HHHcCchhcCcCCceEEeC
Confidence            99997642  235555554

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.58  E-value=8.6e-14  Score=116.83  Aligned_cols=196  Identities=17%  Similarity=0.122  Sum_probs=122.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+     +++.+.. +.+.  ..++.++.+|++|++++.++++      
T Consensus        10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576         10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRS-----QEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999998     3333222 2221  2356788999999998887765      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCc-chH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAK-SAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~-~~~  128 (292)
                       ++|++||++|...                   +.++.++++++.+.  .+-.+++. |+.......      +.. .|.
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~------~~~~~Y~  158 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM------PMQAHVC  158 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC------CCccHHH
Confidence             4799999997422                   34555666655432  10145654 443211111      233 444


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceecc-ccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAG-YFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .+|..++.+++.       .+++++.++|+.+.+ .........      ...............+...+|+|++++.++
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  232 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS------PELQAAVAQSVPLKRNGTKQDIANAALFLA  232 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            599999888874       468889999988753 211111000      000000000011233567899999999999


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      ..+.  ..|..+.+.|
T Consensus       233 ~~~~~~~~G~~~~~~g  248 (264)
T PRK07576        233 SDMASYITGVVLPVDG  248 (264)
T ss_pred             ChhhcCccCCEEEECC
Confidence            7642  2455666654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.57  E-value=1.7e-13  Score=114.70  Aligned_cols=202  Identities=14%  Similarity=0.075  Sum_probs=121.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh-cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK-NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |+++||||+|.||+.++++|.++|++|++++|+     +++.+.. +.+. ..++..+.+|++|.+++.++++       
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRN-----EENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999999999999998     4433222 2221 1357889999999998887774       


Q ss_pred             cCCEEEEcCcCCC---------------------c----hhHHHHHHHHHH-hCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 QVDVVISTVSRGQ---------------------I----PEQAKIIAAVKE-AGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ~~d~vi~~a~~~~---------------------~----~~~~~l~~a~~~-~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                      ++|++||++|...                     +    ..+..++..+.+ .+ -.++|+ |+......     .++..
T Consensus        76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~  149 (259)
T PRK08340         76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVKEP-----MPPLV  149 (259)
T ss_pred             CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccCCC-----CCCch
Confidence            5899999999631                     0    112233343332 23 356665 44322111     11233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceecccccccccc-CCC-CCCCCCc--eeecCCCcceEEeeccchHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ-IGA-PAPPREK--VTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      .|..+|..++.+.+.       .|+++..+.||.+-......... ... .......  ............+...+|+|+
T Consensus       150 ~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  229 (259)
T PRK08340        150 LADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGS  229 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHH
Confidence            444599998888774       46888888898876553211000 000 0000000  000000011223567899999


Q ss_pred             HHHHhhcCCc-C-CCceEEEcC
Q 039623          195 YTINSIDGPR-T-LNKTLYIRP  214 (292)
Q Consensus       195 ~~~~~l~~~~-~-~~~~~~~~~  214 (292)
                      +++.++..+. . .|.++.+.|
T Consensus       230 ~~~fL~s~~~~~itG~~i~vdg  251 (259)
T PRK08340        230 LIAFLLSENAEYMLGSTIVFDG  251 (259)
T ss_pred             HHHHHcCcccccccCceEeecC
Confidence            9999998642 2 345555543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.57  E-value=1.3e-13  Score=115.07  Aligned_cols=196  Identities=11%  Similarity=0.083  Sum_probs=121.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|.||++++++|.++|++|++++|+..   .+..+.+... ...+..+.+|++|.+++.++++       ++
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP---TETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch---HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999998877521   1222222221 3457889999999988888775       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cC-CCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++|||||...                   +.+...+++++.    +.+.-.++++ |+ .+.....      ....|..
T Consensus        87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------~~~~Y~~  160 (253)
T PRK08993         87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI------RVPSYTA  160 (253)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC------CCcchHH
Confidence            99999998643                   334444455443    3321135554 33 2221111      1224444


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..++||++-......+....   .....  .... -....+...+|+|..++.++.+
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~---~~~~~--~~~~-~p~~r~~~p~eva~~~~~l~s~  234 (253)
T PRK08993        161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADE---QRSAE--ILDR-IPAGRWGLPSDLMGPVVFLASS  234 (253)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccch---HHHHH--HHhc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            99998888763       4789999999999765432211000   00000  0000 0112356789999999999976


Q ss_pred             Cc--CCCceEEEc
Q 039623          203 PR--TLNKTLYIR  213 (292)
Q Consensus       203 ~~--~~~~~~~~~  213 (292)
                      ..  ..|..+.+.
T Consensus       235 ~~~~~~G~~~~~d  247 (253)
T PRK08993        235 ASDYINGYTIAVD  247 (253)
T ss_pred             cccCccCcEEEEC
Confidence            42  235555554

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=1.4e-13  Score=113.49  Aligned_cols=189  Identities=15%  Similarity=0.120  Sum_probs=118.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH-HHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH-ESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~-~~~~~~~~~~d~vi~~   80 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+....           ...++..+.+|++++ +.+.+.+.++|++||+
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~   74 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNT   74 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence            5799999999999999999999999999999974321           023578899999987 4444445579999999


Q ss_pred             CcCCC--------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHH
Q 039623           81 VSRGQ--------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        81 a~~~~--------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e  135 (292)
                      +|...                    +.++.++++++.    +.+ ..++++ |+.......     .....|..+|..++
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~~  148 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAG-----GGGAAYTASKHALA  148 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-----CCCcccHHHHHHHH
Confidence            98531                    334455555543    333 356665 332221111     11234555999888


Q ss_pred             HHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CC
Q 039623          136 RAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TL  206 (292)
Q Consensus       136 ~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~  206 (292)
                      .+.+.       .+++++.++|+++.+.........      ...............+...+|+|.+++.++.+..  ..
T Consensus       149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~  222 (235)
T PRK06550        149 GFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP------GGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQ  222 (235)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc------hHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCC
Confidence            77663       479999999998865532110000      0000000001112345788999999999996542  23


Q ss_pred             CceEEEc
Q 039623          207 NKTLYIR  213 (292)
Q Consensus       207 ~~~~~~~  213 (292)
                      +..+.+.
T Consensus       223 g~~~~~~  229 (235)
T PRK06550        223 GTIVPID  229 (235)
T ss_pred             CcEEEEC
Confidence            5555554

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.56  E-value=2.2e-13  Score=114.02  Aligned_cols=201  Identities=11%  Similarity=0.091  Sum_probs=123.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++|+||||+|.||+.+++.|.++|++ |++++|+     .++.+ ....+.  ...+.++.+|++|++++.++++     
T Consensus         7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRN-----AEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCC-----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999998 9999987     33332 112221  3357789999999998887765     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++||++|...                   +.+..++++++.+    .+...++++ |+.......     .....
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----~~~~~  156 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-----PFLAA  156 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----CCcch
Confidence              5899999998643                   2344455555433    221245665 443321111     11345


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .+++++.++|+++.+......... ....................+++.+|+++++..+
T Consensus       157 Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  235 (260)
T PRK06198        157 YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQRE-FHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFL  235 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhh-ccCCChHHHHHHhccCCccCCcCHHHHHHHHHHH
Confidence            55599999888773       468888899998876532111000 0000000000000111123467899999999999


Q ss_pred             hcCCc--CCCceEEEc
Q 039623          200 IDGPR--TLNKTLYIR  213 (292)
Q Consensus       200 l~~~~--~~~~~~~~~  213 (292)
                      +....  ..|+.+.+.
T Consensus       236 ~~~~~~~~~G~~~~~~  251 (260)
T PRK06198        236 LSDESGLMTGSVIDFD  251 (260)
T ss_pred             cChhhCCccCceEeEC
Confidence            87543  245666664

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=1.1e-13  Score=115.43  Aligned_cols=196  Identities=9%  Similarity=0.100  Sum_probs=121.3

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+  +.||+.++++|+++|++|++.+|+     ....+.++.+....+..+.+|++|++++.++++       
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-----DRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-----hHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            569999999  799999999999999999999886     222233344444567899999999988877664       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      .+|++||+||...                       +.+...+.+++.+.- .-.+++. |+.+.....     +....|
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-----~~~~~Y  157 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI-----PNYNVM  157 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC-----Ccchhh
Confidence            4899999998531                       223334444433221 0134544 443322211     112344


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|+++..|.||.+-..........      .+....+........+..++|+|+++..++
T Consensus       158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedva~~~~~l~  231 (252)
T PRK06079        158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH------KDLLKESDSRTVDGVGVTIEEVGNTAAFLL  231 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh------HHHHHHHHhcCcccCCCCHHHHHHHHHHHh
Confidence            5599999888764       578999999999876532211000      000000000001124578899999999999


Q ss_pred             cCCc--CCCceEEEc
Q 039623          201 DGPR--TLNKTLYIR  213 (292)
Q Consensus       201 ~~~~--~~~~~~~~~  213 (292)
                      ....  ..|+++.+.
T Consensus       232 s~~~~~itG~~i~vd  246 (252)
T PRK06079        232 SDLSTGVTGDIIYVD  246 (252)
T ss_pred             CcccccccccEEEeC
Confidence            7642  235555554

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=3e-13  Score=111.67  Aligned_cols=189  Identities=18%  Similarity=0.141  Sum_probs=119.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh-cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK-NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|+||.++++.|.++|++|++++|+     +++.+.+ ..+. ..++..+.+|++|.+++.++++       
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRN-----ENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999998     4444333 2221 2367899999999988877664       


Q ss_pred             cCCEEEEcCcCCC-----------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           73 QVDVVISTVSRGQ-----------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      ++|.++|+++...                 +.....+++.+.+.  . -.+++. |+.+....    +..+...|..+|.
T Consensus        81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~----~~~~~~~Y~~sK~  155 (238)
T PRK05786         81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-GSSIVLVSSMSGIYK----ASPDQLSYAVAKA  155 (238)
T ss_pred             CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-CCEEEEEecchhccc----CCCCchHHHHHHH
Confidence            3699999998542                 22223333333321  1 134444 44332111    1112334555999


Q ss_pred             HHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc-
Q 039623          133 KIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR-  204 (292)
Q Consensus       133 ~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-  204 (292)
                      ..+.+++.       .+++++++||+++.+...+....      .  ..  ...   ...++..+|++++++.++..+. 
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~------~--~~--~~~---~~~~~~~~~va~~~~~~~~~~~~  222 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNW------K--KL--RKL---GDDMAPPEDFAKVIIWLLTDEAD  222 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhh------h--hh--ccc---cCCCCCHHHHHHHHHHHhccccc
Confidence            88766543       48999999999998764221100      0  00  000   1124677999999999997643 


Q ss_pred             -CCCceEEEc
Q 039623          205 -TLNKTLYIR  213 (292)
Q Consensus       205 -~~~~~~~~~  213 (292)
                       ..+..+.+.
T Consensus       223 ~~~g~~~~~~  232 (238)
T PRK05786        223 WVDGVVIPVD  232 (238)
T ss_pred             CccCCEEEEC
Confidence             245555554

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.2e-13  Score=117.83  Aligned_cols=185  Identities=12%  Similarity=0.045  Sum_probs=116.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|.||.++++.|.++|++|++++|+     .++.+.+.....  ..+..+.+|++|.+++.++++       
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHARGAKLALVDLE-----EAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            479999999999999999999999999999998     544433322222  235556699999988877664       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh---CCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA---GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~---~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      .+|++||++|...                   +.++..+++++...   . ..++|. |+.+.....     .....|..
T Consensus        85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~a  158 (296)
T PRK05872         85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAA-----PGMAAYCA  158 (296)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCC-----CCchHHHH
Confidence            5899999999743                   33444445544321   2 245665 443322221     11234555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCC-CcceEEeeccchHHHHHHHhh
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGD-GNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      +|..++.+.+.       .|+.+..+.||++.+.........      ..... .... ......+...+|++++++.++
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~  232 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD------LPAFRELRARLPWPLRRTTSVEKCAAAFVDGI  232 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc------chhHHHHHhhCCCcccCCCCHHHHHHHHHHHH
Confidence            99999888763       578899999988865532211000      00000 0000 001123467899999999988


Q ss_pred             cCC
Q 039623          201 DGP  203 (292)
Q Consensus       201 ~~~  203 (292)
                      .+.
T Consensus       233 ~~~  235 (296)
T PRK05872        233 ERR  235 (296)
T ss_pred             hcC
Confidence            764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.56  E-value=1.6e-13  Score=114.98  Aligned_cols=203  Identities=10%  Similarity=0.036  Sum_probs=120.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.......+..+.+|+.|.+++.++++       .+
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS-----AAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999997     444433333223457889999999888777664       57


Q ss_pred             CEEEEcCcCCC------------------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCCcch
Q 039623           75 DVVISTVSRGQ------------------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        75 d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      |++||+||...                        +.+...+++++.+.-  .-.++|+ ++.......     .....|
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y  155 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN-----GGGPLY  155 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-----CCCchh
Confidence            99999998521                        223444555554321  0134444 332211111     112345


Q ss_pred             HHHHHHHHHHHHH------cCccEEEEecceecccccccccc-CCCCCCCCCce-eecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQ-IGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..++.+.+.      ..+++..+.||.+.......... ..-........ ...........+...+|+|++++.+
T Consensus       156 ~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l  235 (262)
T TIGR03325       156 TAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFF  235 (262)
T ss_pred             HHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeee
Confidence            5599999988864      13677777888876553221100 00000000000 0000001123456789999999999


Q ss_pred             hcCCc---CCCceEEEcC
Q 039623          200 IDGPR---TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~---~~~~~~~~~~  214 (292)
                      +.+..   ..|.++.+.|
T Consensus       236 ~s~~~~~~~tG~~i~vdg  253 (262)
T TIGR03325       236 ATRGDTVPATGAVLNYDG  253 (262)
T ss_pred             ecCCCcccccceEEEecC
Confidence            87532   2455556553

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=5e-13  Score=111.66  Aligned_cols=195  Identities=12%  Similarity=0.053  Sum_probs=121.6

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCC-------CCcchhhHhhhh--cCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTAS-------DPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~   70 (292)
                      ++|+||||||  .||.++++.|.++|++|++++|++.+.       ..+.......+.  ..++.++.+|++|.+++..+
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   85 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV   85 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            5799999995  699999999999999999999873211       011111112221  23588999999999887776


Q ss_pred             Hc-------cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCc
Q 039623           71 IK-------QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        71 ~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~  119 (292)
                      ++       .+|+|||++|...                   +.++..+++++.+.    + ..++++ |+.....     
T Consensus        86 ~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~-----  159 (256)
T PRK12748         86 FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSLG-----  159 (256)
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCccccC-----
Confidence            64       4799999998642                   34566666665432    2 356666 3322111     


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchH
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                      +......|..+|..++.+++.       .+++++.++||.+...+......       ........    ...+...+|+
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-------~~~~~~~~----~~~~~~~~~~  228 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-------HHLVPKFP----QGRVGEPVDA  228 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-------HhhhccCC----CCCCcCHHHH
Confidence            111233455599999988764       47899999999876553221100       00000000    1123456899


Q ss_pred             HHHHHHhhcCCc--CCCceEEEc
Q 039623          193 ATYTINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       193 a~~~~~~l~~~~--~~~~~~~~~  213 (292)
                      ++.+..++....  ..+..+++.
T Consensus       229 a~~~~~l~~~~~~~~~g~~~~~d  251 (256)
T PRK12748        229 ARLIAFLVSEEAKWITGQVIHSE  251 (256)
T ss_pred             HHHHHHHhCcccccccCCEEEec
Confidence            999998887542  235666664

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.55  E-value=3.1e-13  Score=112.66  Aligned_cols=196  Identities=13%  Similarity=0.100  Sum_probs=121.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|.||+++++.|+++|++|++++|+     .++.+.+.. +.  ...+.++.+|++|++++.++++      
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRT-----KEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF   76 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999998     333322222 21  2468899999999988877664      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec--cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP--SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~--s~~g~~~~~~~~~~~~~~~  126 (292)
                       .+|++||++|...                   +.+...+++++.+    .+.-.++++  |.++....      .....
T Consensus        77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------~~~~~  150 (252)
T PRK07677         77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG------PGVIH  150 (252)
T ss_pred             CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC------CCCcc
Confidence             5799999998532                   3344555555532    221245665  44442211      11234


Q ss_pred             hHHHHHHHHHHHHH--------cCccEEEEecceeccccc-cccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          127 AYADKIKIRRAIEA--------EGIQYTYVSCNCFAGYFL-PTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       127 ~~~~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      |..+|..++.+.+.        .|+++..++||.+.+... .....      ................+...+|+++++.
T Consensus       151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (252)
T PRK07677        151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE------SEEAAKRTIQSVPLGRLGTPEEIAGLAY  224 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC------CHHHHHHHhccCCCCCCCCHHHHHHHHH
Confidence            55599998887763        378899999998864211 11100      0000000000001123567899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..|..+.+.|
T Consensus       225 ~l~~~~~~~~~g~~~~~~g  243 (252)
T PRK07677        225 FLLSDEAAYINGTCITMDG  243 (252)
T ss_pred             HHcCccccccCCCEEEECC
Confidence            9887542  2345555543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.55  E-value=1.6e-13  Score=126.24  Aligned_cols=198  Identities=13%  Similarity=0.104  Sum_probs=126.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|.||.++++.|.++|++|++++|+     .++.+.+.......+..+.+|++|++++.++++       .+
T Consensus       270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRD-----AEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     444443333333456778999999998887775       48


Q ss_pred             CEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           75 DVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        75 d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      |++|||||...                    +.++..+.+++...- .-.++|+ |+.......     .....|..+|+
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asKa  419 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL-----PPRNAYCASKA  419 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-----CCCchhHHHHH
Confidence            99999999641                    344555555554431 1245655 443322221     12345555999


Q ss_pred             HHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc-
Q 039623          133 KIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR-  204 (292)
Q Consensus       133 ~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-  204 (292)
                      .++.+.+.       .|+++..++||.+.+.........     .......+........+..++|+|++++.++.... 
T Consensus       420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~  494 (520)
T PRK06484        420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-----GRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAAS  494 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-----cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            99888764       478999999999876543211100     00000000000011134678999999999997542 


Q ss_pred             -CCCceEEEcC
Q 039623          205 -TLNKTLYIRP  214 (292)
Q Consensus       205 -~~~~~~~~~~  214 (292)
                       ..|+.+.+.|
T Consensus       495 ~~~G~~i~vdg  505 (520)
T PRK06484        495 YVNGATLTVDG  505 (520)
T ss_pred             CccCcEEEECC
Confidence             2456666654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=1.5e-13  Score=114.11  Aligned_cols=175  Identities=11%  Similarity=0.082  Sum_probs=111.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh---cCCcEEEECCCC--CHHHHHHHH----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK---NLGVNVLYGDLQ--DHESLIKAI----   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~---~~~v~~v~~D~~--d~~~~~~~~----   71 (292)
                      ++|+||||+|+||.++++.|++.|++|++++|+     .++.+.+ +++.   ..++.++.+|+.  +.+++.+++    
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRT-----EEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC-----HHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     4333222 2222   235677888886  555554443    


Q ss_pred             ---ccCCEEEEcCcCCC--------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCC
Q 039623           72 ---KQVDVVISTVSRGQ--------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        72 ---~~~d~vi~~a~~~~--------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                         ..+|+|||+|+...                    +.++..++++    +++.+ .+++++ |+.......     ..
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~-----~~  161 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGR-----AN  161 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCC-----CC
Confidence               35899999998632                    2343344444    44555 677776 443322221     12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+++.       .+++++.++|+.+.+.......       .. .    .    ...+...+|+++.+
T Consensus       162 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~-------~~-~----~----~~~~~~~~~~~~~~  225 (247)
T PRK08945        162 WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF-------PG-E----D----PQKLKTPEDIMPLY  225 (247)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc-------Cc-c----c----ccCCCCHHHHHHHH
Confidence            33455599998888764       3677888888877543211100       00 0    0    11346789999999


Q ss_pred             HHhhcCC
Q 039623          197 INSIDGP  203 (292)
Q Consensus       197 ~~~l~~~  203 (292)
                      ..++...
T Consensus       226 ~~~~~~~  232 (247)
T PRK08945        226 LYLMGDD  232 (247)
T ss_pred             HHHhCcc
Confidence            9988654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.55  E-value=1.6e-13  Score=118.55  Aligned_cols=77  Identities=17%  Similarity=0.230  Sum_probs=62.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||.++++.|+++|++|++++|+     .++.+.+ +.+  ....+.++.+|++|.+++.++++      
T Consensus         7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRN-----LKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            469999999999999999999999999999998     4443222 222  12358899999999998887775      


Q ss_pred             -cCCEEEEcCcC
Q 039623           73 -QVDVVISTVSR   83 (292)
Q Consensus        73 -~~d~vi~~a~~   83 (292)
                       .+|++||+||.
T Consensus        82 ~~iD~li~nAg~   93 (322)
T PRK07453         82 KPLDALVCNAAV   93 (322)
T ss_pred             CCccEEEECCcc
Confidence             38999999984

>PRK05855 short chain dehydrogenase; Validated

Probab=99.55  E-value=1.6e-13  Score=127.82  Aligned_cols=146  Identities=12%  Similarity=0.090  Sum_probs=101.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .++.+.+.. +.  ..++.++.+|++|++++.++++      
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDID-----EAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998     444332222 21  3467899999999998877775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHH----HHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIA----AVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~----a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++|||||...                   +.++.++++    .+++.+.-.++|. |+.......     .....|
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y  465 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-----RSLPAY  465 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----CCCcHH
Confidence             4899999999753                   223334444    4444441246665 443221111     123456


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceecccc
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYF  157 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~  157 (292)
                      ..+|..++.+.+.       .|++++.++||.+-...
T Consensus       466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  502 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI  502 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence            6699998887653       48999999999987654

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.54  E-value=3.3e-13  Score=111.60  Aligned_cols=173  Identities=12%  Similarity=0.047  Sum_probs=110.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh---hcCCcEEEECCCCC--HHHHHHHH----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF---KNLGVNVLYGDLQD--HESLIKAI----   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~v~~v~~D~~d--~~~~~~~~----   71 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+   ....+..+.+|+.|  .+++.+++    
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVARH-----QKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC-----hHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            579999999999999999999999999999998     4333222 121   12346778889875  33444333    


Q ss_pred             ----ccCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cC-CCCCCccCCccC
Q 039623           72 ----KQVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SE-FGNDVDRSQNVV  121 (292)
Q Consensus        72 ----~~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~-~g~~~~~~~~~~  121 (292)
                          ..+|+|||+||...                    +.++..+++++    .+.+ ..++++ ++ .+....      
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------  154 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPK------  154 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCC------
Confidence                35799999999531                    23333444444    4444 455655 33 332111      


Q ss_pred             CCCcchHHHHHHHHHHHHH-------c-CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHH
Q 039623          122 EPAKSAYADKIKIRRAIEA-------E-GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       122 ~~~~~~~~~K~~~e~~~~~-------~-~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                      .....|..+|..++.+++.       . ++++..++||.+.+....... .               +.....+...+|++
T Consensus       155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-~---------------~~~~~~~~~~~~~~  218 (239)
T PRK08703        155 AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-P---------------GEAKSERKSYGDVL  218 (239)
T ss_pred             CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-C---------------CCCccccCCHHHHH
Confidence            1223455599999888763       1 588888999998766322110 0               01111346889999


Q ss_pred             HHHHHhhcC
Q 039623          194 TYTINSIDG  202 (292)
Q Consensus       194 ~~~~~~l~~  202 (292)
                      ..++.++..
T Consensus       219 ~~~~~~~~~  227 (239)
T PRK08703        219 PAFVWWASA  227 (239)
T ss_pred             HHHHHHhCc
Confidence            999999974

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.54  E-value=4e-13  Score=112.45  Aligned_cols=202  Identities=14%  Similarity=0.070  Sum_probs=123.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh---cCCcEEEECCCCCHHHHHHHHc---cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK---NLGVNVLYGDLQDHESLIKAIK---QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~---~~~v~~v~~D~~d~~~~~~~~~---~~   74 (292)
                      ++++|||++|.+|+++++.|+++|++|.+++|+     +++.+.+. .+.   ..++..+.+|++|++++.++++   .+
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   82 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARD-----ADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDI   82 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998     44443222 121   3457889999999999888775   58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||++|...                       +...+.+++.+++.+ -.++++ |+.......     .....|..+
T Consensus        83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~-----~~~~~y~as  156 (259)
T PRK06125         83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPD-----ADYICGSAG  156 (259)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCC-----CCchHhHHH
Confidence            99999998643                       223444444555544 345665 332221111     112233349


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCC-CCCCCCC-ceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG-APAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      |..++.+.+.       .|+++..+.||.+.+.......... ....... ....+........+..++|+|++++.++.
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLAS  236 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcC
Confidence            9998877764       4789999999998765422111100 0000000 00000000011235688999999999987


Q ss_pred             CCc--CCCceEEEcC
Q 039623          202 GPR--TLNKTLYIRP  214 (292)
Q Consensus       202 ~~~--~~~~~~~~~~  214 (292)
                      ...  ..|..+.+.|
T Consensus       237 ~~~~~~~G~~i~vdg  251 (259)
T PRK06125        237 PRSGYTSGTVVTVDG  251 (259)
T ss_pred             chhccccCceEEecC
Confidence            532  2355555543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.54  E-value=2.9e-13  Score=113.39  Aligned_cols=197  Identities=14%  Similarity=0.092  Sum_probs=120.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||+++++.|.++|++|.+..|+..    ++.+ ..+.+.  ..++.++.+|++|.+++.++++      
T Consensus         8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDE----EEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999998888532    2221 112222  3457789999999998877764      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++||++|...                       +..++.+++.+.+.+.-.++++ |+.....     +..+...|
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----~~~~~~~Y  158 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----PWPLFVHY  158 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----CCCCCccc
Confidence             4899999999643                       1233455566665541245655 4432111     11223455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|.+++.+.+.       .+++++.++||.+-+........      ................+...+|+++.+..++
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  232 (261)
T PRK08936        159 AASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA------DPKQRADVESMIPMGYIGKPEEIAAVAAWLA  232 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            5599887777653       47999999999886653211100      0000000000011123567899999999998


Q ss_pred             cCCc--CCCceEEEc
Q 039623          201 DGPR--TLNKTLYIR  213 (292)
Q Consensus       201 ~~~~--~~~~~~~~~  213 (292)
                      ....  ..+..+.+.
T Consensus       233 s~~~~~~~G~~i~~d  247 (261)
T PRK08936        233 SSEASYVTGITLFAD  247 (261)
T ss_pred             CcccCCccCcEEEEC
Confidence            7542  234444444

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.54  E-value=4.9e-13  Score=109.28  Aligned_cols=169  Identities=14%  Similarity=0.088  Sum_probs=114.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-----cCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-----QVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-----~~d   75 (292)
                      |++++||||+|.||+++++.|+++|++|++++|+     +++.+   .+...+++++.+|++|.+++.+++.     ++|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~-----~~~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d   72 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARD-----AAALA---ALQALGAEALALDVADPASVAGLAWKLDGEALD   72 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECC-----HHHHH---HHHhccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence            8899999999999999999999999999999998     44433   2333467889999999998888643     489


Q ss_pred             EEEEcCcCCC---------------------chhHHHHHHHHHHh--CCcceeec-c-CCCCCCccCCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ---------------------IPEQAKIIAAVKEA--GNVKRFLP-S-EFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~---------------------~~~~~~l~~a~~~~--~~~~~~i~-s-~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      ++||++|...                     +.++..+++++.+.  ..-.++++ + ..+.....   +..+...|..+
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~~~Y~~s  149 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---TGTTGWLYRAS  149 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---cCCCccccHHh
Confidence            9999998751                     34566666666541  10133443 3 33322111   11112246669


Q ss_pred             HHHHHHHHHHc-----CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEAE-----GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~~-----~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+++..     +++++.++||++.....            ..           ......++.++.++.++...
T Consensus       150 K~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~------------~~-----------~~~~~~~~~~~~~~~~~~~~  204 (222)
T PRK06953        150 KAALNDALRAASLQARHATCIALHPGWVRTDMG------------GA-----------QAALDPAQSVAGMRRVIAQA  204 (222)
T ss_pred             HHHHHHHHHHHhhhccCcEEEEECCCeeecCCC------------CC-----------CCCCCHHHHHHHHHHHHHhc
Confidence            99999988753     56777778887765421            00           01246688899998887654

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.8e-13  Score=112.95  Aligned_cols=202  Identities=13%  Similarity=0.106  Sum_probs=120.0

Q ss_pred             Cce-EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            1 MAA-TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         1 m~~-vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |+| ++|||| |+||+++++.|. +|++|++++|+     .++.+. .+.+.  ...+.++.+|++|.+++.++++    
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~   73 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYN-----EENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT   73 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence            654 788887 789999999995 89999999997     433322 22232  2357889999999988887775    


Q ss_pred             --cCCEEEEcCcCCC------------chhHHHHHHHHHHh----CCcceeeccCCCCCCccC-------------C---
Q 039623           73 --QVDVVISTVSRGQ------------IPEQAKIIAAVKEA----GNVKRFLPSEFGNDVDRS-------------Q---  118 (292)
Q Consensus        73 --~~d~vi~~a~~~~------------~~~~~~l~~a~~~~----~~~~~~i~s~~g~~~~~~-------------~---  118 (292)
                        .+|++||+||...            +.++..+++++.+.    + ...++.|..+......             .   
T Consensus        74 ~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (275)
T PRK06940         74 LGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG-AGVVIASQSGHRLPALTAEQERALATTPTEELL  152 (275)
T ss_pred             cCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCC-CEEEEEecccccCcccchhhhcccccccccccc
Confidence              4899999999753            44555555555432    3 2223334433221100             0   


Q ss_pred             -cc---C----CCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce
Q 039623          119 -NV---V----EPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG  183 (292)
Q Consensus       119 -~~---~----~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (292)
                       .+   .    .+...|..+|+.++.+.+.       .|+++..|.||++.+.........    ...............
T Consensus       153 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~p~  228 (275)
T PRK06940        153 SLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG----PRGDGYRNMFAKSPA  228 (275)
T ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC----CchHHHHHHhhhCCc
Confidence             00   0    1123455599998777653       478899999998876532211100    000000000000111


Q ss_pred             EEeeccchHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          184 AVYNKEDDIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       184 ~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      ..+...+|+|+++..++....  ..|..+.+.|
T Consensus       229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg  261 (275)
T PRK06940        229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG  261 (275)
T ss_pred             ccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence            245788999999999997532  2355566653

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.53  E-value=6.8e-13  Score=111.96  Aligned_cols=183  Identities=15%  Similarity=0.101  Sum_probs=116.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCC--cchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDP--VKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+......  .+.+ ..+.+.  ..++.++.+|++|.+++.++++    
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   86 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE   86 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999997432100  0111 111121  2457889999999998887775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++||++|...                   +.++..+++++..    .+ -.+++. |+.....   .....+..
T Consensus        87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~---~~~~~~~~  162 (273)
T PRK08278         87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLD---PKWFAPHT  162 (273)
T ss_pred             HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhcc---ccccCCcc
Confidence               5899999999643                   3455566666543    22 234554 3321111   11012234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecce-eccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNC-FAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|.+++.+++.       .+++++.+.|+. +........       . .+.       .....+...+|+|+.++
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~-------~-~~~-------~~~~~~~~p~~va~~~~  227 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNL-------L-GGD-------EAMRRSRTPEIMADAAY  227 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhc-------c-ccc-------ccccccCCHHHHHHHHH
Confidence            555599999998874       478888888873 333221111       0 000       11123568899999999


Q ss_pred             HhhcCC
Q 039623          198 NSIDGP  203 (292)
Q Consensus       198 ~~l~~~  203 (292)
                      .++...
T Consensus       228 ~l~~~~  233 (273)
T PRK08278        228 EILSRP  233 (273)
T ss_pred             HHhcCc
Confidence            999764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.53  E-value=4.9e-13  Score=110.47  Aligned_cols=150  Identities=20%  Similarity=0.154  Sum_probs=107.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhhhcC-CcEEEECCCCCHHHHHHHH-------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFKNL-GVNVLYGDLQDHESLIKAI-------K   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~-~v~~v~~D~~d~~~~~~~~-------~   72 (292)
                      |.|+|||||..||.+++.+|.++|.++..+.|....  .++. +.++..... ++.++++|++|.++..+.+       .
T Consensus        13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rr--l~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARR--LERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhh--HHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            469999999999999999999999998888887322  2222 333333334 4999999999999888665       3


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++|++|||||...                       +..++.++..+++.+ -.+++.  |..|.....      ...-|
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P------~~~~Y  163 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLP------FRSIY  163 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCC------ccccc
Confidence            7999999999865                       556788888888876 567765  555543332      12355


Q ss_pred             HHHHHHHHHHHHHc-------CccEE-EEecceeccccccc
Q 039623          128 YADKIKIRRAIEAE-------GIQYT-YVSCNCFAGYFLPT  160 (292)
Q Consensus       128 ~~~K~~~e~~~~~~-------~~~~~-~ir~~~~~~~~~~~  160 (292)
                      .+||.+++.+.+..       +..+. .+.||++-..+.+.
T Consensus       164 ~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  164 SASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGK  204 (282)
T ss_pred             chHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccch
Confidence            56999999988741       22222 46799988775543

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4.3e-13  Score=115.03  Aligned_cols=150  Identities=15%  Similarity=0.088  Sum_probs=101.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++|+||||+|+||++++++|+++|++|++++|+     .++.+. .+.+.    ...+.++.+|++|.+++.++++    
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRN-----LDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            479999999999999999999999999999998     333321 12221    2457899999999998877764    


Q ss_pred             ---cCCEEEEcCcCCC---------------------chhHHHHHHHHHHhCCcceeec-cCCCCC-----C-ccC--Cc
Q 039623           73 ---QVDVVISTVSRGQ---------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGND-----V-DRS--QN  119 (292)
Q Consensus        73 ---~~d~vi~~a~~~~---------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~-----~-~~~--~~  119 (292)
                         ++|++||+||...                     +..+..+++.+++.+ ..++|+ |+.+..     . ...  ..
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~  170 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWER  170 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCccc
Confidence               4899999998632                     223667777777765 567776 432211     0 000  11


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEE--ecceecccc
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYV--SCNCFAGYF  157 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~i--r~~~~~~~~  157 (292)
                      +..+...|..+|...+.+.+.       .++++.++  .||++....
T Consensus       171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            222334455599998887764       35555544  588887653

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.6e-12  Score=106.32  Aligned_cols=176  Identities=16%  Similarity=0.144  Sum_probs=114.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc----cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK----QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~v   77 (292)
                      ||++||||+|.||+++++.|.++|++|++++|+     .++.+.+..  ..++..+.+|++|++++.++++    .+|++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGAR-----RDDLEVAAK--ELDVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--hccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            489999999999999999999999999999998     444432221  2257789999999999888875    58999


Q ss_pred             EEcCcCCC------------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           78 ISTVSRGQ------------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        78 i~~a~~~~------------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      ||++|...                        +.+...+++++.+.  . -.++|. |+..   .      .....|..+
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~g~Iv~isS~~---~------~~~~~Y~as  143 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-GGSIISVVPEN---P------PAGSAEAAI  143 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEEEEecCC---C------CCccccHHH
Confidence            99987310                        12223333333221  1 134554 3322   1      113455559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |+.++.+.+.       .++++..+.||.+.......        ...  .          +.-..+|+++++..++...
T Consensus       144 Kaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~--------~~~--~----------p~~~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        144 KAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG--------LSR--T----------PPPVAAEIARLALFLTTPA  203 (223)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh--------ccC--C----------CCCCHHHHHHHHHHHcCch
Confidence            9998888763       46888888998875432110        000  0          0116799999999998754


Q ss_pred             c--CCCceEEEcC
Q 039623          204 R--TLNKTLYIRP  214 (292)
Q Consensus       204 ~--~~~~~~~~~~  214 (292)
                      .  ..|+++.+.|
T Consensus       204 ~~~v~G~~i~vdg  216 (223)
T PRK05884        204 ARHITGQTLHVSH  216 (223)
T ss_pred             hhccCCcEEEeCC
Confidence            2  2345555543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.51  E-value=3.8e-13  Score=101.12  Aligned_cols=139  Identities=18%  Similarity=0.198  Sum_probs=112.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ||+.+|+||||-.|+.+++.+.+.+  -+|+++.|+....         ....+++..+..|....+++...+.++|+.|
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d---------~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~F   88 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD---------PATDKVVAQVEVDFSKLSQLATNEQGPDVLF   88 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC---------ccccceeeeEEechHHHHHHHhhhcCCceEE
Confidence            5789999999999999999999998  3799999984221         1224578888999998899988999999999


Q ss_pred             EcCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCc-c
Q 039623           79 STVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGI-Q  144 (292)
Q Consensus        79 ~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~-~  144 (292)
                      .|.|-+.            -.....++++|++.| |++|+. |+.|.+...       .-.|...|-++|+-+.+.++ +
T Consensus        89 caLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS-------rFlY~k~KGEvE~~v~eL~F~~  160 (238)
T KOG4039|consen   89 CALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS-------RFLYMKMKGEVERDVIELDFKH  160 (238)
T ss_pred             EeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc-------ceeeeeccchhhhhhhhccccE
Confidence            9988765            345778889999999 999987 888877654       23455599999999988886 4


Q ss_pred             EEEEecceeccc
Q 039623          145 YTYVSCNCFAGY  156 (292)
Q Consensus       145 ~~~ir~~~~~~~  156 (292)
                      ++|+|||.+.+.
T Consensus       161 ~~i~RPG~ll~~  172 (238)
T KOG4039|consen  161 IIILRPGPLLGE  172 (238)
T ss_pred             EEEecCcceecc
Confidence            777799998765

>PRK05599 hypothetical protein; Provisional

Probab=99.50  E-value=1.3e-12  Score=108.44  Aligned_cols=180  Identities=15%  Similarity=0.185  Sum_probs=114.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhc---CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKN---LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~---~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||++.||..+++.|. +|++|++++|+     .++.+.+ +.+..   ..+.++.+|++|.+++.++++     
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   74 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARR-----PEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL   74 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCC-----HHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh
Confidence            679999999999999999998 59999999998     4444322 22222   237789999999988877654     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        +.|++||++|...                       +...+.+++.+.+.+.-.+++. |+ .+....      ....
T Consensus        75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------~~~~  148 (246)
T PRK05599         75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR------RANY  148 (246)
T ss_pred             cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC------cCCc
Confidence              5899999999753                       1112233344444321245554 43 332211      1123


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .++++..+.||.+.+......        ...+           -....+|+|++++.
T Consensus       149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~--------~~~~-----------~~~~pe~~a~~~~~  209 (246)
T PRK05599        149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM--------KPAP-----------MSVYPRDVAAAVVS  209 (246)
T ss_pred             chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC--------CCCC-----------CCCCHHHHHHHHHH
Confidence            444499998887764       467888888888765532110        0000           01467999999999


Q ss_pred             hhcCCcCCCceEEEc
Q 039623          199 SIDGPRTLNKTLYIR  213 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~  213 (292)
                      ++..... ++.+.+.
T Consensus       210 ~~~~~~~-~~~~~~~  223 (246)
T PRK05599        210 AITSSKR-STTLWIP  223 (246)
T ss_pred             HHhcCCC-CceEEeC
Confidence            9987643 3344453

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=1.2e-12  Score=109.77  Aligned_cols=196  Identities=11%  Similarity=0.054  Sum_probs=116.6

Q ss_pred             ceEEEEcc--CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGG--TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||  ++.||+++++.|.++|++|++..|+.     ...+.++.+..  .....+.+|++|++++.++++     
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVD-----KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-----HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            46999997  67999999999999999999887751     11222233321  234578999999998887764     


Q ss_pred             --cCCEEEEcCcCCC------------------------chhHHHHHHHHHH---hCCcceeec-cCCCCCCccCCccCC
Q 039623           73 --QVDVVISTVSRGQ------------------------IPEQAKIIAAVKE---AGNVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 --~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~---~~~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                        ++|++|||||...                        +.+...+.+++..   .+ -.++|. |+.+.....     +
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~-----~  155 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAI-----P  155 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCC-----C
Confidence              5899999998641                        1112222222221   11 134554 444322221     1


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ....|..+|..++.+.+.       .|+++..+.||.+-..........      ...............+..++|+|++
T Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~peevA~~  229 (261)
T PRK08690        156 NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF------GKLLGHVAAHNPLRRNVTIEEVGNT  229 (261)
T ss_pred             CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch------HHHHHHHhhcCCCCCCCCHHHHHHH
Confidence            123444599998887663       578999999999876532211000      0000000011112246788999999


Q ss_pred             HHHhhcCCc--CCCceEEEcC
Q 039623          196 TINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +..++....  ..|..+.+.|
T Consensus       230 v~~l~s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        230 AAFLLSDLSSGITGEITYVDG  250 (261)
T ss_pred             HHHHhCcccCCcceeEEEEcC
Confidence            999998642  2355555543

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.50  E-value=4.5e-12  Score=108.68  Aligned_cols=192  Identities=8%  Similarity=0.062  Sum_probs=116.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++.+|+..    ++. +..+.+.  ..++..+.+|++|.+++.++++      
T Consensus        13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~----~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792         13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA----LDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCch----hHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            57999999999999999999999999999887532    222 1222222  3457889999999988887765      


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh----C-----C-cceeec-cCCCCCCccCCccCC
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA----G-----N-VKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~-----~-~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                      ++|++||+||...                   +.++..+++++.+.    .     . -.++|. |+.......     .
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  163 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP-----V  163 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-----C
Confidence            5899999999743                   33455555554321    0     0 135554 332211111     1


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ....|..+|..++.+.+.       .|+++..+.|+. ..........       ....  ..  .....+.+++|++.+
T Consensus       164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~-------~~~~--~~--~~~~~~~~pe~va~~  231 (306)
T PRK07792        164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFG-------DAPD--VE--AGGIDPLSPEHVVPL  231 (306)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhcc-------ccch--hh--hhccCCCCHHHHHHH
Confidence            123455599998887753       478888888863 2111111000       0000  00  011234578999999


Q ss_pred             HHHhhcCCc--CCCceEEEcC
Q 039623          196 TINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +..++....  ..|+++.+.|
T Consensus       232 v~~L~s~~~~~~tG~~~~v~g  252 (306)
T PRK07792        232 VQFLASPAAAEVNGQVFIVYG  252 (306)
T ss_pred             HHHHcCccccCCCCCEEEEcC
Confidence            999887532  2455555553

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.50  E-value=7.1e-13  Score=125.36  Aligned_cols=174  Identities=15%  Similarity=0.210  Sum_probs=119.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||.++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus       372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        372 KVVLITGASSGIGRATAIKVAEAGATVFLVARN-----GEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998     4443222 2221  3458899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC---------------------c----hhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ---------------------I----PEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~---------------------~----~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                       ++|++||+||...                     +    ..++.+++.+++.+ ..++|. |+.+.....     ....
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~  520 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNA-----PRFS  520 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCC-----CCcc
Confidence             5899999999631                     1    12334445555555 667776 544322221     1123


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .+++++.++||.+.+.......          .   +.    ....+..+++|+.++.
T Consensus       521 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~----------~---~~----~~~~~~~~~~a~~i~~  583 (657)
T PRK07201        521 AYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK----------R---YN----NVPTISPEEAADMVVR  583 (657)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc----------c---cc----CCCCCCHHHHHHHHHH
Confidence            455599999888764       4799999999998765321100          0   00    1124678999999999


Q ss_pred             hhcCC
Q 039623          199 SIDGP  203 (292)
Q Consensus       199 ~l~~~  203 (292)
                      .+.+.
T Consensus       584 ~~~~~  588 (657)
T PRK07201        584 AIVEK  588 (657)
T ss_pred             HHHhC
Confidence            87653

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.49  E-value=1.6e-12  Score=107.22  Aligned_cols=172  Identities=16%  Similarity=0.141  Sum_probs=109.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~   76 (292)
                      |+|+||||+|+||++++++|+++|  +.|....|+...          .....++.++++|++|.+++.++.+   ++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc----------ccccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            589999999999999999999986  455555554211          1123578889999999988766544   6899


Q ss_pred             EEEcCcCCC-----------------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCc
Q 039623           77 VISTVSRGQ-----------------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        77 vi~~a~~~~-----------------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~  125 (292)
                      +||++|...                             +..++.++..+++.+ ..+++.  |..|.....   +..+..
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~---~~~~~~  146 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDN---RLGGWY  146 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccC---CCCCcc
Confidence            999999752                             123334444444443 345443  333322111   112233


Q ss_pred             chHHHHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          126 SAYADKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      .|..+|..++.+.+.         .++.+..+.||.+.+.......         ..       .....++..+|+|+++
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~---------~~-------~~~~~~~~~~~~a~~~  210 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ---------QN-------VPKGKLFTPEYVAQCL  210 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh---------hc-------cccCCCCCHHHHHHHH
Confidence            555699999888764         2566777788877655321110         00       0112246889999999


Q ss_pred             HHhhcCC
Q 039623          197 INSIDGP  203 (292)
Q Consensus       197 ~~~l~~~  203 (292)
                      +.++...
T Consensus       211 ~~l~~~~  217 (235)
T PRK09009        211 LGIIANA  217 (235)
T ss_pred             HHHHHcC
Confidence            9999875

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.49  E-value=1e-12  Score=108.54  Aligned_cols=181  Identities=10%  Similarity=0.090  Sum_probs=115.5

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      |+||||+|+||.++++.|.++|++|.+++|+..    ++. +..+.+.  ..++.++.+|++|.+++.++++       .
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGR----SDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGA   76 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999987632    222 1222222  3468899999999988877764       4


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHH-----HHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAV-----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~-----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      .|.+||++|...                   +.++..+++++     ++.+ ..++|. |+.......     +....|.
T Consensus        77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~~~~~Y~  150 (239)
T TIGR01831        77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGN-----RGQVNYS  150 (239)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCC-----CCCcchH
Confidence            799999998642                   33455555554     2233 456665 443222111     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .+++++.++|+.+.+.........      .+..  .. ......+...+|+++++..++.
T Consensus       151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~--~~-~~~~~~~~~~~~va~~~~~l~~  221 (239)
T TIGR01831       151 AAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD------LDEA--LK-TVPMNRMGQPAEVASLAGFLMS  221 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH------HHHH--Hh-cCCCCCCCCHHHHHHHHHHHcC
Confidence            599987766653       478999999999876643321110      0000  00 0011234577999999999998


Q ss_pred             CC
Q 039623          202 GP  203 (292)
Q Consensus       202 ~~  203 (292)
                      .+
T Consensus       222 ~~  223 (239)
T TIGR01831       222 DG  223 (239)
T ss_pred             ch
Confidence            64

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.49  E-value=1.9e-12  Score=113.85  Aligned_cols=78  Identities=21%  Similarity=0.269  Sum_probs=63.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+||||+|+||++++++|.++|++|++++|+     +++.+........++..+.+|++|.+++.+.+.++|++||+|
T Consensus       179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~-----~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA  253 (406)
T PRK07424        179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSN-----SDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH  253 (406)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence            679999999999999999999999999999987     333321111112346788999999999999999999999999


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      |..
T Consensus       254 Gi~  256 (406)
T PRK07424        254 GIN  256 (406)
T ss_pred             CcC
Confidence            864

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.3e-12  Score=103.55  Aligned_cols=166  Identities=19%  Similarity=0.189  Sum_probs=111.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |+++||||+|.||.+++++|.++ ++|++++|+.     .              .+.+|++|.+++.++++   ++|++|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~-----~--------------~~~~D~~~~~~~~~~~~~~~~id~lv   60 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSS-----G--------------DVQVDITDPASIRALFEKVGKVDAVV   60 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC-----C--------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence            58999999999999999999999 9999999972     1              36899999999988876   689999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      |++|...                   +.++.++++++.+.  + -..++. |+.......     .....|..+|..++.
T Consensus        61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~~~~-----~~~~~Y~~sK~a~~~  134 (199)
T PRK07578         61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSDEPI-----PGGASAATVNGALEG  134 (199)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccCCCC-----CCchHHHHHHHHHHH
Confidence            9999643                   23445566665542  2 234554 332221111     123345559999888


Q ss_pred             HHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceE
Q 039623          137 AIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL  210 (292)
Q Consensus       137 ~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  210 (292)
                      +.+.      .++++..++||++-+.....          ...+   .    ...++..+|+|+++..+++.. ..|+++
T Consensus       135 ~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~----------~~~~---~----~~~~~~~~~~a~~~~~~~~~~-~~g~~~  196 (199)
T PRK07578        135 FVKAAALELPRGIRINVVSPTVLTESLEKY----------GPFF---P----GFEPVPAARVALAYVRSVEGA-QTGEVY  196 (199)
T ss_pred             HHHHHHHHccCCeEEEEEcCCcccCchhhh----------hhcC---C----CCCCCCHHHHHHHHHHHhccc-eeeEEe
Confidence            7763      46778888888775432100          0000   1    113578999999999999764 334444


Q ss_pred             E
Q 039623          211 Y  211 (292)
Q Consensus       211 ~  211 (292)
                      +
T Consensus       197 ~  197 (199)
T PRK07578        197 K  197 (199)
T ss_pred             c
Confidence            4

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.47  E-value=2.4e-12  Score=108.10  Aligned_cols=196  Identities=12%  Similarity=0.051  Sum_probs=120.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+...     .      ...++..+.+|++|++++.++++       .+
T Consensus        10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~-----~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171         10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD-----G------QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc-----c------ccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999987432     1      12367889999999998887765       47


Q ss_pred             CEEEEcCcCCC----------------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccC
Q 039623           75 DVVISTVSRGQ----------------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVV  121 (292)
Q Consensus        75 d~vi~~a~~~~----------------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~  121 (292)
                      |++||+||...                            +.++..+++++.+    .+ -.++|+ |+.......     
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  152 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGS-----  152 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCC-----
Confidence            99999998521                            2334455555443    33 345665 433222111     


Q ss_pred             CCCcchHHHHHHHHHHHHH-------cCccEEEEecceecc-ccccccccCCCCCCCC---Cc-eeecCC--CcceEEee
Q 039623          122 EPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAG-YFLPTLAQIGAPAPPR---EK-VTIFGD--GNAGAVYN  187 (292)
Q Consensus       122 ~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~-~~~~~~~~~~~~~~~~---~~-~~~~~~--~~~~~~~i  187 (292)
                      .....|..+|..++.+++.       .++++..++||.+.. ................   .. ...+..  ......+.
T Consensus       153 ~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  232 (266)
T PRK06171        153 EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSG  232 (266)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCC
Confidence            1123444499998888764       478999999998842 2111000000000000   00 000000  11122456


Q ss_pred             ccchHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          188 KEDDIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      ..+|+|.++..++....  ..|..+.+.|
T Consensus       233 ~~~eva~~~~fl~s~~~~~itG~~i~vdg  261 (266)
T PRK06171        233 KLSEVADLVCYLLSDRASYITGVTTNIAG  261 (266)
T ss_pred             CHHHhhhheeeeeccccccceeeEEEecC
Confidence            78999999999997542  2355566643

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2.8e-12  Score=106.25  Aligned_cols=166  Identities=13%  Similarity=0.059  Sum_probs=104.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++++||||+|+||++++++|+++|++|++++|+..    +..+   .........+.+|++|.+++.+.+.++|++||||
T Consensus        15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~----~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnA   87 (245)
T PRK12367         15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI----NNSE---SNDESPNEWIKWECGKEESLDKQLASLDVLILNH   87 (245)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch----hhhh---hhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence            57999999999999999999999999999999741    1111   1111123678899999999999888999999999


Q ss_pred             cCCC----------------chhHHHHHHHHH----Hh---CCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHH
Q 039623           82 SRGQ----------------IPEQAKIIAAVK----EA---GNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        82 ~~~~----------------~~~~~~l~~a~~----~~---~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      |...                +.+...+++++.    +.   +....++.++.+....      .....|..+|..++.+.
T Consensus        88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~------~~~~~Y~aSKaal~~~~  161 (245)
T PRK12367         88 GINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP------ALSPSYEISKRLIGQLV  161 (245)
T ss_pred             ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC------CCCchhHHHHHHHHHHH
Confidence            8642                334444444443    31   1012234443221111      11234555999875432


Q ss_pred             ---H-------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          139 ---E-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       139 ---~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                         +       ..++.+..+.|+.+....            .  +          ...+..+|+|+.++..+.+.+
T Consensus       162 ~l~~~l~~e~~~~~i~v~~~~pg~~~t~~------------~--~----------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        162 SLKKNLLDKNERKKLIIRKLILGPFRSEL------------N--P----------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHhhcccccEEEEecCCCccccc------------C--c----------cCCCCHHHHHHHHHHHHhcCC
Confidence               1       134555555665532211            0  0          013678999999999997654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=2.7e-12  Score=107.37  Aligned_cols=193  Identities=13%  Similarity=0.072  Sum_probs=116.1

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+  +.||++++++|+++|++|++.+|+.     +..+.++.+.  ......+.+|++|.+++.++++     
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLND-----KARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCh-----hhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            569999998  4899999999999999999999873     2221222221  1235678999999988877764     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCC
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                        .+|++|||||...                       +.+    ++.++..+++ +  .+++. |+.+.....     +
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-~--g~Ii~iss~~~~~~~-----~  157 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-G--GSLLTMSYYGAEKVV-----E  157 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-C--CEEEEEeccccccCC-----c
Confidence              4799999998531                       222    3333333322 2  34544 444332211     1


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ....|..+|..++.+.+.       .|+++..|.||.+...........      ...............+...+|+|.+
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~dva~~  231 (258)
T PRK07533        158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF------DALLEDAAERAPLRRLVDIDDVGAV  231 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCc------HHHHHHHHhcCCcCCCCCHHHHHHH
Confidence            123344599998887763       578899999998866532211000      0000000000111235678999999


Q ss_pred             HHHhhcCCc--CCCceEEEc
Q 039623          196 TINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~  213 (292)
                      ++.++.+..  ..|+.+.+.
T Consensus       232 ~~~L~s~~~~~itG~~i~vd  251 (258)
T PRK07533        232 AAFLASDAARRLTGNTLYID  251 (258)
T ss_pred             HHHHhChhhccccCcEEeeC
Confidence            999997532  245555554

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=3.2e-12  Score=107.69  Aligned_cols=196  Identities=12%  Similarity=0.074  Sum_probs=116.4

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      +.++||||++  .||+.++++|.++|++|++.+|+     ....+.++.+..  .....+.+|++|.+++.++++     
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~-----~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQG-----EALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCc-----hHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4699999996  89999999999999999998886     222222222211  123578999999988877764     


Q ss_pred             --cCCEEEEcCcCC-------C----------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 --QVDVVISTVSRG-------Q----------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 --~~d~vi~~a~~~-------~----------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                        .+|++|||||..       .                +.+...+++++...  . -.++|. |+.+.....     +..
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~G~Iv~isS~~~~~~~-----~~~  156 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-GGSMLTLTYGGSTRVM-----PNY  156 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-CceEEEEcCCCccccC-----Ccc
Confidence              589999999853       1                22233333333221  1 134554 333221111     112


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .|+++..|.||.+...........      ...............+...+|+|++++
T Consensus       157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~peeva~~~~  230 (271)
T PRK06505        157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA------RAIFSYQQRNSPLRRTVTIDEVGGSAL  230 (271)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch------HHHHHHHhhcCCccccCCHHHHHHHHH
Confidence            3455599998888764       478999999998876432111000      000000000001123467899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..++.+.+.|
T Consensus       231 fL~s~~~~~itG~~i~vdg  249 (271)
T PRK06505        231 YLLSDLSSGVTGEIHFVDS  249 (271)
T ss_pred             HHhCccccccCceEEeecC
Confidence            9997542  2355555543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=2.9e-12  Score=107.07  Aligned_cols=199  Identities=8%  Similarity=0.054  Sum_probs=118.2

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhhcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFKNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+  +.||.+++++|.++|++|++.+|+...  .++.+.+. .+...++..+.+|++|++++.++++      
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL--EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc--hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            469999997  899999999999999999998875211  22232222 2223457889999999988877764      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++|||+|...                       +.+...+++++.+.= .-.++|. |+.......     +....
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----~~~~~  160 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV-----QNYNV  160 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC-----CCCch
Confidence             4899999998531                       112222333333211 0135554 433222111     11234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .|+++..|.||.+...........      .+.............+...+|+|++++.+
T Consensus       161 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~~va~~~~~l  234 (257)
T PRK08594        161 MGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF------NSILKEIEERAPLRRTTTQEEVGDTAAFL  234 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc------cHHHHHHhhcCCccccCCHHHHHHHHHHH
Confidence            55599999888764       478899999998876532111000      00000000001122356789999999999


Q ss_pred             hcCCc--CCCceEEEc
Q 039623          200 IDGPR--TLNKTLYIR  213 (292)
Q Consensus       200 l~~~~--~~~~~~~~~  213 (292)
                      +....  ..|..+.+.
T Consensus       235 ~s~~~~~~tG~~~~~d  250 (257)
T PRK08594        235 FSDLSRGVTGENIHVD  250 (257)
T ss_pred             cCcccccccceEEEEC
Confidence            97542  235555554

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=6.6e-12  Score=104.91  Aligned_cols=195  Identities=12%  Similarity=0.063  Sum_probs=118.9

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCC------CCcch-hhHhhhh--cCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTAS------DPVKG-KLIEIFK--NLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~   70 (292)
                      ++|+||||+|  .||.++++.|+++|++|++..|+....      ..++. +..+.+.  ...+.++.+|++|.+++.++
T Consensus         7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~   86 (256)
T PRK12859          7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKEL   86 (256)
T ss_pred             cEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            5799999995  799999999999999998876532110      01111 1111222  23577889999999988877


Q ss_pred             Hc-------cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCc
Q 039623           71 IK-------QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        71 ~~-------~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~  119 (292)
                      +.       .+|++||++|...                       +..++.++..+++.+ -.++|+ |+......    
T Consensus        87 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----  161 (256)
T PRK12859         87 LNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQGP----  161 (256)
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCCC----
Confidence            74       3799999998643                       223344555555544 456776 43322111    


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchH
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                       ......|..+|..++.+.+.       .+++++.++||.+.+..........       ......    ...+...+|+
T Consensus       162 -~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~-------~~~~~~----~~~~~~~~d~  229 (256)
T PRK12859        162 -MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQG-------LLPMFP----FGRIGEPKDA  229 (256)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHH-------HHhcCC----CCCCcCHHHH
Confidence             12234455599999888664       4789999999988765322110000       000000    1123567999


Q ss_pred             HHHHHHhhcCCc-C-CCceEEEc
Q 039623          193 ATYTINSIDGPR-T-LNKTLYIR  213 (292)
Q Consensus       193 a~~~~~~l~~~~-~-~~~~~~~~  213 (292)
                      |+++..++.... . .|+.+.+.
T Consensus       230 a~~~~~l~s~~~~~~~G~~i~~d  252 (256)
T PRK12859        230 ARLIKFLASEEAEWITGQIIHSE  252 (256)
T ss_pred             HHHHHHHhCccccCccCcEEEeC
Confidence            999999987542 2 34444443

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.45  E-value=3.4e-12  Score=107.60  Aligned_cols=196  Identities=11%  Similarity=0.077  Sum_probs=116.9

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |+++||||+  +.||+.+++.|.++|++|++.+|+...  .++.+.+....... ..+.+|++|.+++.++++       
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~--~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL--KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH--HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence            579999997  789999999999999999999887210  12222221111222 578999999988877764       


Q ss_pred             cCCEEEEcCcCC------C-----------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 QVDVVISTVSRG------Q-----------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ~~d~vi~~a~~~------~-----------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                      ++|++|||||..      .                 +.    .++.++..+++.   .+++. |+.+.....     +..
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~---g~Iv~isS~~~~~~~-----~~~  154 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG---ASVLTLSYLGGVKYV-----PHY  154 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC---CcEEEEecCCCccCC-----Ccc
Confidence            579999999952      1                 22    233344444322   34554 544322221     112


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|+.++.+.+.       .|+++..+.||++...........      ...............+...+|+|.+++
T Consensus       155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~pl~r~~~pedva~~v~  228 (274)
T PRK08415        155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDF------RMILKWNEINAPLKKNVSIEEVGNSGM  228 (274)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchh------hHHhhhhhhhCchhccCCHHHHHHHHH
Confidence            3344599998888764       478888899998865421111000      000000000001123567899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..|+.+.+.|
T Consensus       229 fL~s~~~~~itG~~i~vdG  247 (274)
T PRK08415        229 YLLSDLSSGVTGEIHYVDA  247 (274)
T ss_pred             HHhhhhhhcccccEEEEcC
Confidence            9997532  2455555553

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.45  E-value=3.2e-12  Score=107.04  Aligned_cols=196  Identities=12%  Similarity=0.052  Sum_probs=116.7

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||++  .||+++++.|.++|++|++.+|+.     ...+.++.+.  ......+.+|++|++++.++++     
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-----KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-----hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            5699999985  899999999999999999888762     1112222222  1245678999999999888774     


Q ss_pred             --cCCEEEEcCcCCC------------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCC
Q 039623           73 --QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 --~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                        .+|++|||||...                        +.+...+.+++...  . -.+++. |+.+.....      |
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~Iv~iss~~~~~~~------~  154 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-GSALLTLSYLGAERAI------P  154 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-CcEEEEEecCCCCCCC------C
Confidence              4799999998531                        11222233333221  1 134544 444332211      2


Q ss_pred             Cc-chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          124 AK-SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 ~~-~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      .. .|..+|..++.+.+.       .++++..|.||.+-.........     . ...............+...+|++.+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-----~-~~~~~~~~~~~p~~r~~~pedva~~  228 (262)
T PRK07984        155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-----F-RKMLAHCEAVTPIRRTVTIEDVGNS  228 (262)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-----h-HHHHHHHHHcCCCcCCCCHHHHHHH
Confidence            23 444599999888774       46888888888886532110000     0 0000000000111245688999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++....  ..+..+.+.|.
T Consensus       229 ~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        229 AAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHcCcccccccCcEEEECCC
Confidence            999997632  24556666543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.45  E-value=3.8e-12  Score=115.03  Aligned_cols=195  Identities=14%  Similarity=0.136  Sum_probs=120.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|.||..+++.|.++|++|++++|+..   .++...+  ....+...+.+|++|.+++.++++       ++
T Consensus       211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~---~~~l~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA---GEALAAV--ANRVGGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc---HHHHHHH--HHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            47999999999999999999999999999988521   1222111  112356788999999988877765       48


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHHhC---Ccceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKEAG---NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~---~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      |+|||++|...                   +.++.++.+++....   .-.++|. |+.......     .....|..+|
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-----~~~~~Y~asK  360 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-----RGQTNYAASK  360 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----CCChHHHHHH
Confidence            99999999642                   456667777776532   0145664 443221111     1134555599


Q ss_pred             HHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          132 IKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       132 ~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      ..++.+++.       .++.+..+.||.+-........ ...... .+...      ........+|+++++..++....
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~-~~~~~~-~~~~~------~l~~~~~p~dva~~~~~l~s~~~  432 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIP-FATREA-GRRMN------SLQQGGLPVDVAETIAWLASPAS  432 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccc-hhHHHH-HhhcC------CcCCCCCHHHHHHHHHHHhChhh
Confidence            987777653       5788999999887543211110 000000 00000      01122345799999999987532


Q ss_pred             --CCCceEEEcC
Q 039623          205 --TLNKTLYIRP  214 (292)
Q Consensus       205 --~~~~~~~~~~  214 (292)
                        ..|+.+.++|
T Consensus       433 ~~itG~~i~v~g  444 (450)
T PRK08261        433 GGVTGNVVRVCG  444 (450)
T ss_pred             cCCCCCEEEECC
Confidence              2366677764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.45  E-value=2e-12  Score=108.72  Aligned_cols=193  Identities=16%  Similarity=0.066  Sum_probs=112.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh---cCCcEEEECCCCCHHHH----HHHH--
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK---NLGVNVLYGDLQDHESL----IKAI--   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~---~~~v~~v~~D~~d~~~~----~~~~--   71 (292)
                      +.++||||+|+||+++++.|+++|++|+++.|+.    .++.+.+ +.+.   ...+..+.+|++|.+++    .+++  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~   77 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRS----AAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDA   77 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHH
Confidence            4699999999999999999999999999987652    2222221 2221   23466789999998654    3332  


Q ss_pred             -----ccCCEEEEcCcCCC------------------------------chhHHHHHHHHHHhC---------Ccceeec
Q 039623           72 -----KQVDVVISTVSRGQ------------------------------IPEQAKIIAAVKEAG---------NVKRFLP  107 (292)
Q Consensus        72 -----~~~d~vi~~a~~~~------------------------------~~~~~~l~~a~~~~~---------~~~~~i~  107 (292)
                           .++|+||||||...                              +.+...+++++.+..         .-..++.
T Consensus        78 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  157 (267)
T TIGR02685        78 CFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN  157 (267)
T ss_pred             HHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence                 35899999998632                              112334444433221         0112332


Q ss_pred             -cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceecccc-ccccccCCCCCCCCCceeecC
Q 039623          108 -SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYF-LPTLAQIGAPAPPREKVTIFG  178 (292)
Q Consensus       108 -s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  178 (292)
                       ++....     .+..+...|..+|..++.+.+.       .|++++.|+||++..+. .+.....    ......   .
T Consensus       158 ~~s~~~~-----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~----~~~~~~---~  225 (267)
T TIGR02685       158 LCDAMTD-----QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQE----DYRRKV---P  225 (267)
T ss_pred             ehhhhcc-----CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHH----HHHHhC---C
Confidence             221111     1112234556699999888774       57999999999874221 1100000    000000   0


Q ss_pred             CCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEc
Q 039623          179 DGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       179 ~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~  213 (292)
                      .   .......+|++.+++.++.+..  ..|+.+.+.
T Consensus       226 ~---~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~  259 (267)
T TIGR02685       226 L---GQREASAEQIADVVIFLVSPKAKYITGTCIKVD  259 (267)
T ss_pred             C---CcCCCCHHHHHHHHHHHhCcccCCcccceEEEC
Confidence            0   0123578999999999997642  234555554

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.45  E-value=8e-12  Score=106.11  Aligned_cols=197  Identities=10%  Similarity=0.011  Sum_probs=116.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC----CCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc--
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA----SDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK--   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~--   72 (292)
                      ++++||||++.||+++++.|.++|++|++++|+...    ...++.+ ..+.+.  ...+..+.+|++|.+++.++++  
T Consensus         7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (286)
T PRK07791          7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAA   86 (286)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            579999999999999999999999999998876310    0012222 122222  2356788999999988877664  


Q ss_pred             -----cCCEEEEcCcCCC-------------------chhH----HHHHHHHHHhCC-----cceeec-cCCCCCCccCC
Q 039623           73 -----QVDVVISTVSRGQ-------------------IPEQ----AKIIAAVKEAGN-----VKRFLP-SEFGNDVDRSQ  118 (292)
Q Consensus        73 -----~~d~vi~~a~~~~-------------------~~~~----~~l~~a~~~~~~-----~~~~i~-s~~g~~~~~~~  118 (292)
                           .+|++|||||...                   +.++    +.++..+++...     -.++|. |+.......  
T Consensus        87 ~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--  164 (286)
T PRK07791         87 VETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS--  164 (286)
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC--
Confidence                 5799999999743                   2333    333333333210     135655 443322221  


Q ss_pred             ccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccch
Q 039623          119 NVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDD  191 (292)
Q Consensus       119 ~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (292)
                         .....|..+|..++.+.+.       .|+++..|.|+ +...........    ...    ...  .........+|
T Consensus       165 ---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~----~~~----~~~--~~~~~~~~ped  230 (286)
T PRK07791        165 ---VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAE----MMA----KPE--EGEFDAMAPEN  230 (286)
T ss_pred             ---CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHH----HHh----cCc--ccccCCCCHHH
Confidence               1123455599998887763       57889999997 322211110000    000    000  00113457899


Q ss_pred             HHHHHHHhhcCCc--CCCceEEEcC
Q 039623          192 IATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       192 ~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +|.+++.++....  ..|+.+.+.|
T Consensus       231 va~~~~~L~s~~~~~itG~~i~vdg  255 (286)
T PRK07791        231 VSPLVVWLGSAESRDVTGKVFEVEG  255 (286)
T ss_pred             HHHHHHHHhCchhcCCCCcEEEEcC
Confidence            9999999997532  3455566654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.45  E-value=4e-12  Score=116.97  Aligned_cols=185  Identities=14%  Similarity=0.141  Sum_probs=116.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||++.||.++++.|.++|++|++++|+     .++.+.+......++..+.+|++|++++.++++       ++
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRN-----VERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            469999999999999999999999999999998     444433322224467789999999998877764       48


Q ss_pred             CEEEEcCcCCC---------------------ch----hHHHHHHHHHHhCCcc-eeec-cCCCCCCccCCccCCCCcch
Q 039623           75 DVVISTVSRGQ---------------------IP----EQAKIIAAVKEAGNVK-RFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        75 d~vi~~a~~~~---------------------~~----~~~~l~~a~~~~~~~~-~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      |++||+||...                     +.    ..+.++..+++.+ -. ++|. |+.......     .....|
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~~iv~isS~~~~~~~-----~~~~~Y  154 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG-HGAAIVNVASGAGLVAL-----PKRTAY  154 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCCeEEEECCcccCCCC-----CCCchH
Confidence            99999998621                     22    3334444444433 22 5665 443222221     113345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .+++++.++||.+.............  ......   ........+...+|++.++..++
T Consensus       155 ~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~va~~v~~l~  229 (520)
T PRK06484        155 SASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGK--LDPSAV---RSRIPLGRLGRPEEIAEAVFFLA  229 (520)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccch--hhhHHH---HhcCCCCCCcCHHHHHHHHHHHh
Confidence            5599999887763       47889999999886554322111000  000000   00000113457889999999888


Q ss_pred             cC
Q 039623          201 DG  202 (292)
Q Consensus       201 ~~  202 (292)
                      ..
T Consensus       230 ~~  231 (520)
T PRK06484        230 SD  231 (520)
T ss_pred             Cc
Confidence            64

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.45  E-value=8.1e-12  Score=104.49  Aligned_cols=197  Identities=10%  Similarity=0.062  Sum_probs=118.4

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+  +.||+.++++|.++|++|.+..|+....  ...+.++.+..  ..+..+.+|++|++++.++++     
T Consensus         7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG--RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc--hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            469999986  7999999999999999998887753210  11122222221  246688999999999887764     


Q ss_pred             --cCCEEEEcCcCC------C-----------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCC
Q 039623           73 --QVDVVISTVSRG------Q-----------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 --~~d~vi~~a~~~------~-----------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                        .+|++|||+|..      .                 +.+    ++.++..+++.   .++|+ |+.+.....     +
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~---g~Iv~isS~~~~~~~-----~  156 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG---GSIVTLTYLGGVRAI-----P  156 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC---CeEEEEeccccccCC-----c
Confidence              489999999853      1                 223    33344444332   45554 443322111     1


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ....|..+|..++.+.+.       .|+++..+.||.+...........      .+.............+...+|++.+
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~~~dva~~  230 (258)
T PRK07370        157 NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI------LDMIHHVEEKAPLRRTVTQTEVGNT  230 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc------hhhhhhhhhcCCcCcCCCHHHHHHH
Confidence            223455599999888774       468899999998866532111000      0000000000112245678999999


Q ss_pred             HHHhhcCCc--CCCceEEEcC
Q 039623          196 TINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +..++.+..  ..|+.+.+.|
T Consensus       231 ~~fl~s~~~~~~tG~~i~vdg  251 (258)
T PRK07370        231 AAFLLSDLASGITGQTIYVDA  251 (258)
T ss_pred             HHHHhChhhccccCcEEEECC
Confidence            999997542  2355565543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.43  E-value=1.6e-12  Score=108.64  Aligned_cols=187  Identities=12%  Similarity=0.051  Sum_probs=112.8

Q ss_pred             eEEEEccCCcchHHHHHHHHh----CCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHcc
Q 039623            3 ATLIIGGTGYIGKKILEASVK----AGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      .++||||+|.||.+++++|.+    .|++|++++|+     .++.+.+ +.+.    ...+.++.+|++|.+++.++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   76 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARN-----DEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA   76 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcC-----HHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence            589999999999999999997    79999999998     4433322 2222    23578899999999988777642


Q ss_pred             -----------CCEEEEcCcCCC--------------------------chhHHHHHHHHHHh-CCcceeec-cCCCCCC
Q 039623           74 -----------VDVVISTVSRGQ--------------------------IPEQAKIIAAVKEA-GNVKRFLP-SEFGNDV  114 (292)
Q Consensus        74 -----------~d~vi~~a~~~~--------------------------~~~~~~l~~a~~~~-~~~~~~i~-s~~g~~~  114 (292)
                                 .|++||+||...                          +..++.++..+++. +.-.++++ |+.....
T Consensus        77 ~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~  156 (256)
T TIGR01500        77 LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ  156 (256)
T ss_pred             HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC
Confidence                       258999998531                          11233444444433 21235665 4432221


Q ss_pred             ccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEee
Q 039623          115 DRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYN  187 (292)
Q Consensus       115 ~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  187 (292)
                      ..     +....|..+|..++.+.+.       .++.+..+.||++-...........   ........+........+.
T Consensus       157 ~~-----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  228 (256)
T TIGR01500       157 PF-----KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREES---VDPDMRKGLQELKAKGKLV  228 (256)
T ss_pred             CC-----CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhc---CChhHHHHHHHHHhcCCCC
Confidence            11     1123455599999888764       4678888889888665322111000   0000000000000112357


Q ss_pred             ccchHHHHHHHhhcC
Q 039623          188 KEDDIATYTINSIDG  202 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~  202 (292)
                      .++|+|..++.++.+
T Consensus       229 ~p~eva~~~~~l~~~  243 (256)
T TIGR01500       229 DPKVSAQKLLSLLEK  243 (256)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            889999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.43  E-value=5.6e-12  Score=108.41  Aligned_cols=149  Identities=13%  Similarity=0.139  Sum_probs=97.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||||.||.++++.|.++|++|++++|+     .++.+. .+.+.    ..++.++.+|+.|.+++.++++    
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~-----~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRN-----RAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     443322 22221    2358899999999998887764    


Q ss_pred             ---cCCEEEEcCcCCC----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCc-----cC--Cc
Q 039623           73 ---QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVD-----RS--QN  119 (292)
Q Consensus        73 ---~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~-----~~--~~  119 (292)
                         .+|++||+||...                      +..++.++..+++.  ..++|. |+......     ..  ..
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccc
Confidence               4899999999643                      12233444444433  245554 33211110     00  11


Q ss_pred             cCCCCcchHHHHHHHHHHHHH---------cCccEEEEecceecccc
Q 039623          120 VVEPAKSAYADKIKIRRAIEA---------EGIQYTYVSCNCFAGYF  157 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~  157 (292)
                      +..+...|..+|...+.+.+.         .++.+..+.||.+....
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            122233455599997776653         25788888899887654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.42  E-value=6.9e-12  Score=105.01  Aligned_cols=197  Identities=10%  Similarity=0.058  Sum_probs=114.9

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC--CcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL--GVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      +.++||||++  .||.++++.|.++|++|++.+|+     ....+.++.+...  ....+.+|++|++++.++++     
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~-----~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS-----EVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc-----hHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            4699999997  79999999999999999988876     2112222333211  23457899999998887774     


Q ss_pred             --cCCEEEEcCcCC-------C----------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRG-------Q----------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~-------~----------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                        .+|++||++|..       .                +.+...+++++...= .-.++|. |+.+.....     +...
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~-----~~~~  158 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI-----PNYN  158 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC-----Cccc
Confidence              489999999852       1                222223333322110 0135554 444322211     1123


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|+.++.+.+.       .|+++..+.||.+..........     . .+.............+...+|+|++++.
T Consensus       159 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-----~-~~~~~~~~~~~p~~r~~~pedva~~~~~  232 (260)
T PRK06603        159 VMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-----F-STMLKSHAATAPLKRNTTQEDVGGAAVY  232 (260)
T ss_pred             chhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-----c-HHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence            455599998887763       57888889998886543211000     0 0000000000011235678999999999


Q ss_pred             hhcCCc-C-CCceEEEcC
Q 039623          199 SIDGPR-T-LNKTLYIRP  214 (292)
Q Consensus       199 ~l~~~~-~-~~~~~~~~~  214 (292)
                      ++.... . .|+.+.+.|
T Consensus       233 L~s~~~~~itG~~i~vdg  250 (260)
T PRK06603        233 LFSELSKGVTGEIHYVDC  250 (260)
T ss_pred             HhCcccccCcceEEEeCC
Confidence            997542 2 345555543

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.42  E-value=5.6e-12  Score=108.56  Aligned_cols=172  Identities=17%  Similarity=0.132  Sum_probs=110.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh----cCCcEEEECCCCC--HHHHH---HHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK----NLGVNVLYGDLQD--HESLI---KAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~----~~~v~~v~~D~~d--~~~~~---~~~   71 (292)
                      +.++||||||.||++++++|.++|++|++++|+     +++.+.+.. +.    ...+..+.+|+++  .+.+.   +.+
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~  128 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARN-----PDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETI  128 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHh
Confidence            469999999999999999999999999999998     555443322 21    1346778889985  33333   333


Q ss_pred             c--cCCEEEEcCcCCC-------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCC
Q 039623           72 K--QVDVVISTVSRGQ-------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        72 ~--~~d~vi~~a~~~~-------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                      .  ++|++||+||...                         +..++.++..+.+.+ ..++|. |+......    +..|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~----~~~p  203 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVI----PSDP  203 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC----CCCc
Confidence            4  3569999998631                         223444444455555 567776 44322110    0112


Q ss_pred             -CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          124 -AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 -~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                       ...|..+|..++.+.+.       .|++++.+.||.+.......         ....          ......+++|+.
T Consensus       204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~---------~~~~----------~~~~~p~~~A~~  264 (320)
T PLN02780        204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI---------RRSS----------FLVPSSDGYARA  264 (320)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc---------cCCC----------CCCCCHHHHHHH
Confidence             33455599998888764       47899999999887653210         0000          012467899999


Q ss_pred             HHHhhcC
Q 039623          196 TINSIDG  202 (292)
Q Consensus       196 ~~~~l~~  202 (292)
                      ++..+..
T Consensus       265 ~~~~~~~  271 (320)
T PLN02780        265 ALRWVGY  271 (320)
T ss_pred             HHHHhCC
Confidence            9999864

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.42  E-value=7e-12  Score=104.75  Aligned_cols=196  Identities=11%  Similarity=-0.003  Sum_probs=115.9

Q ss_pred             ceEEEEcc--CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGG--TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||  ++.||.++++.|.++|++|++.+|+..   .+..+.+.......+..+.+|++|++++.++++       
T Consensus         8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA---LRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc---hhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            46999999  899999999999999999999988631   122222222123357789999999988877764       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCc-c
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAK-S  126 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~-~  126 (292)
                      ++|++||+||...                       +.+...+.+++...= .-.+++. ++.+. ..      .|.. .
T Consensus        85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~------~~~~~~  157 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VA------WPAYDW  157 (256)
T ss_pred             CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-cc------CCccch
Confidence            5899999998641                       112223333332210 0134443 32221 11      1222 3


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce-EEeeccchHHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG-AVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~  198 (292)
                      |..+|..+..+.+.       .|+++..+.||.+.......+...      ............. +.+...+|+|++++.
T Consensus       158 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~~p~evA~~v~~  231 (256)
T PRK07889        158 MGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF------ELLEEGWDERAPLGWDVKDPTPVARAVVA  231 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc------HHHHHHHHhcCccccccCCHHHHHHHHHH
Confidence            34499998887763       578888889998876532111000      0000000000001 135688999999999


Q ss_pred             hhcCCc--CCCceEEEc
Q 039623          199 SIDGPR--TLNKTLYIR  213 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~  213 (292)
                      ++.+..  ..++++.+.
T Consensus       232 l~s~~~~~~tG~~i~vd  248 (256)
T PRK07889        232 LLSDWFPATTGEIVHVD  248 (256)
T ss_pred             HhCcccccccceEEEEc
Confidence            997642  234555554

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.41  E-value=8.8e-12  Score=105.07  Aligned_cols=199  Identities=10%  Similarity=0.041  Sum_probs=118.2

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+  +.||.++++.|.++|++|++..|+...  .++.+.+.... .....+.+|++|++++.++++       
T Consensus        11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~--~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159         11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL--KKRVEPLAAEL-GAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH--HHHHHHHHHhc-CCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            569999997  789999999999999999888775110  12222221111 235678999999998887764       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      .+|++||+||...                       +.+...+++++.+.= .-.++|. |+.+.....     +....|
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-----p~~~~Y  162 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM-----PHYNVM  162 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC-----Ccchhh
Confidence            4899999998531                       333444555444321 0134544 444322211     112344


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .++++..+.||.+...........      ...............+...+|+|++++.++
T Consensus       163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~peevA~~~~~L~  236 (272)
T PRK08159        163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDF------RYILKWNEYNAPLRRTVTIEEVGDSALYLL  236 (272)
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcc------hHHHHHHHhCCcccccCCHHHHHHHHHHHh
Confidence            4599998888764       468888889998865421111000      000000000011123578899999999999


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      ....  ..|..+.+.|
T Consensus       237 s~~~~~itG~~i~vdg  252 (272)
T PRK08159        237 SDLSRGVTGEVHHVDS  252 (272)
T ss_pred             CccccCccceEEEECC
Confidence            7542  2355666654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=1.4e-11  Score=101.08  Aligned_cols=176  Identities=16%  Similarity=0.113  Sum_probs=123.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QVD   75 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d   75 (292)
                      .||||||++.+|+.++.++.+.|..+.+.+.+.... .+..+.++.. . .+..+.+|++|.+++....+       ++|
T Consensus        40 ~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~-~etv~~~~~~-g-~~~~y~cdis~~eei~~~a~~Vk~e~G~V~  116 (300)
T KOG1201|consen   40 IVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN-EETVKEIRKI-G-EAKAYTCDISDREEIYRLAKKVKKEVGDVD  116 (300)
T ss_pred             EEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch-HHHHHHHHhc-C-ceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence            599999999999999999999999988888885433 2333222222 1 58899999999988877654       589


Q ss_pred             EEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      ++||+||...                       +..++.++..+.+.+ -.++|-  |..|.....      -..+|.+|
T Consensus       117 ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~------gl~~YcaS  189 (300)
T KOG1201|consen  117 ILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPA------GLADYCAS  189 (300)
T ss_pred             EEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCc------cchhhhhh
Confidence            9999999876                       456778888888876 678875  666644332      24566669


Q ss_pred             HHHHHHHHHH----------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          131 KIKIRRAIEA----------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       131 K~~~e~~~~~----------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      |.++..+.++          .|++.+.+.|+.+-...+..          ..+.      ...++.+..+.+|+-++..+
T Consensus       190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----------~~~~------~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG----------ATPF------PTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC----------CCCC------ccccCCCCHHHHHHHHHHHH
Confidence            9998777653          24566666665554332211          0011      22456678899999999998


Q ss_pred             cCCc
Q 039623          201 DGPR  204 (292)
Q Consensus       201 ~~~~  204 (292)
                      ..++
T Consensus       254 ~~n~  257 (300)
T KOG1201|consen  254 LTNQ  257 (300)
T ss_pred             HcCC
Confidence            8764

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.37  E-value=1.8e-11  Score=95.91  Aligned_cols=146  Identities=17%  Similarity=0.216  Sum_probs=99.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++|+||+|++|.++++.|.++|. .|..+.|+.... ......++.+.  ..++.++.+|+++++++.+++.      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA-PGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC-ccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999996 688888874321 11111112222  3356788999999988877765      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                       .+|.+||+++...                   +.+...+++++++.+ .++++. |+.+.....     .....|..+|
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~-----~~~~~y~~sk  153 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGN-----PGQANYAAAN  153 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCC-----CCchhhHHHH
Confidence             3699999998532                   456778888887766 677766 443322221     1123455599


Q ss_pred             HHHHHHHHH---cCccEEEEecceec
Q 039623          132 IKIRRAIEA---EGIQYTYVSCNCFA  154 (292)
Q Consensus       132 ~~~e~~~~~---~~~~~~~ir~~~~~  154 (292)
                      ..++.+++.   .+++++.+.|+.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      154 AFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHhcCCceEEEeecccc
Confidence            998888753   67888888887654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.37  E-value=2.7e-11  Score=101.48  Aligned_cols=198  Identities=10%  Similarity=0.001  Sum_probs=114.9

Q ss_pred             ceEEEEcc--CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGG--TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||  ++.||.++++.|+++|++|++.+|....  .++.+.+.... .....+.+|++|++++.++++       
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAAEF-GSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH--HHHHHHHHHhc-CCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            46999996  6789999999999999999988664110  22322221111 123468899999999887774       


Q ss_pred             cCCEEEEcCcCCC------------------------chhHHHHHHHHHHh-CCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEA-GNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~-~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                      .+|++|||||...                        +.+...+.+++.+. ..-.+++. |+.+.....     +....
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~-----~~~~~  158 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV-----PNYNT  158 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC-----CCcch
Confidence            4899999998531                        12222233333321 00134554 444322211     11234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..+..+.+.       .|+++..|.||++..........     . ...............+..++|+++++..+
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-----~-~~~~~~~~~~~p~~r~~~pedva~~~~~l  232 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-----F-GKILDFVESNAPLRRNVTIEEVGNVAAFL  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-----h-hhHHHHHHhcCcccccCCHHHHHHHHHHH
Confidence            55599998888764       46888888998886532111100     0 00000000000112356889999999999


Q ss_pred             hcCCc--CCCceEEEc
Q 039623          200 IDGPR--TLNKTLYIR  213 (292)
Q Consensus       200 l~~~~--~~~~~~~~~  213 (292)
                      +..+.  ..++++.+.
T Consensus       233 ~s~~~~~itG~~i~vd  248 (260)
T PRK06997        233 LSDLASGVTGEITHVD  248 (260)
T ss_pred             hCccccCcceeEEEEc
Confidence            98642  234555554

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4.3e-11  Score=98.08  Aligned_cols=142  Identities=11%  Similarity=0.045  Sum_probs=95.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||++.||+.+++.|.++|++|.+++|+     .++.+.+ +.+.  ...+..+.+|++|++++.++++      
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~-----~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQD-----QSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999998     4433222 2221  2346778899999988877653      


Q ss_pred             --cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                        ++|++||++|...                        +...+.++..+++.+.-..+|. |+....        ....
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------~~~~  152 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------QDLT  152 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------CCcc
Confidence              5899999997421                        1122233444444321245554 443211        1133


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccc
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGY  156 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~  156 (292)
                      .|..+|..++.+.+.       .++++..|.||++...
T Consensus       153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            455599998888764       4788888899887765

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.34  E-value=8.3e-11  Score=100.69  Aligned_cols=193  Identities=10%  Similarity=0.059  Sum_probs=113.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-----CCcchhhH-hhhhc--CCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-----DPVKGKLI-EIFKN--LGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~-~~~~~--~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      ++++||||++.||.+++++|++.|++|++++|+....     ..++.+.+ +.+..  ..+..+.+|++|++++.++++ 
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   88 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER   88 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            5799999999999999999999999999999974321     01222222 22222  246788999999988877764 


Q ss_pred             ------cCCEEEEcC-cCC------C---------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccC
Q 039623           73 ------QVDVVISTV-SRG------Q---------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRS  117 (292)
Q Consensus        73 ------~~d~vi~~a-~~~------~---------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~  117 (292)
                            ++|++||++ |..      .                     +..++.++..+++.+ -.++|. |+....... 
T Consensus        89 ~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~~-  166 (305)
T PRK08303         89 IDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYNA-  166 (305)
T ss_pred             HHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccccccC-
Confidence                  589999999 631      1                     122334444444433 245654 432111110 


Q ss_pred             CccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcc-eEEeec
Q 039623          118 QNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNA-GAVYNK  188 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~i~  188 (292)
                       .+......|..+|..+..+.+.       .|+++..|.||++-..........     ..... .... ... ..-+..
T Consensus       167 -~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~-~~p~~~~~~~  239 (305)
T PRK08303        167 -THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGV-----TEENWRDALA-KEPHFAISET  239 (305)
T ss_pred             -cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhcc-----Cccchhhhhc-cccccccCCC
Confidence             0001122344499998888763       478888999998865532111000     00000 0000 000 112346


Q ss_pred             cchHHHHHHHhhcCC
Q 039623          189 EDDIATYTINSIDGP  203 (292)
Q Consensus       189 v~D~a~~~~~~l~~~  203 (292)
                      .+|+|.+++.++..+
T Consensus       240 peevA~~v~fL~s~~  254 (305)
T PRK08303        240 PRYVGRAVAALAADP  254 (305)
T ss_pred             HHHHHHHHHHHHcCc
Confidence            899999999999765

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.33  E-value=5.9e-11  Score=102.15  Aligned_cols=77  Identities=14%  Similarity=0.220  Sum_probs=61.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||++.||.++++.|+++| ++|++++|+     .++.+.+ +.+.  ...+..+.+|++|.+++.++++     
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   78 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRD-----FLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES   78 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            469999999999999999999999 999999998     4333222 2221  2357788999999988877663     


Q ss_pred             --cCCEEEEcCcC
Q 039623           73 --QVDVVISTVSR   83 (292)
Q Consensus        73 --~~d~vi~~a~~   83 (292)
                        ++|++||+||.
T Consensus        79 ~~~iD~lI~nAG~   91 (314)
T TIGR01289        79 GRPLDALVCNAAV   91 (314)
T ss_pred             CCCCCEEEECCCc
Confidence              48999999986

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.27  E-value=6.7e-11  Score=92.11  Aligned_cols=129  Identities=22%  Similarity=0.296  Sum_probs=91.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcch-hhHhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKG-KLIEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+|.||+.+++.|+++| +.|.++.|+..   .++. +....+.  ..++.++.+|+++.+++.++++     
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~---~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSED---SEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCH---HHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccc---ccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999996 57788888711   2222 2223332  4678999999999988888775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH-
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA-  129 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-  129 (292)
                        ..|++|||+|...                   +.....+.+++...+ -.+++. |+.....+.      |....|. 
T Consensus        78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~------~~~~~Y~a  150 (167)
T PF00106_consen   78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGS------PGMSAYSA  150 (167)
T ss_dssp             HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSS------TTBHHHHH
T ss_pred             cccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCC------CCChhHHH
Confidence              5899999999876                   445566666666644 456655 444333222      3455555 


Q ss_pred             HHHHHHHHHHH
Q 039623          130 DKIKIRRAIEA  140 (292)
Q Consensus       130 ~K~~~e~~~~~  140 (292)
                      +|..++.+.+.
T Consensus       151 skaal~~~~~~  161 (167)
T PF00106_consen  151 SKAALRGLTQS  161 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998875

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.27  E-value=1.9e-10  Score=94.95  Aligned_cols=143  Identities=15%  Similarity=0.136  Sum_probs=110.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCHHHHHHHHc---------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDHESLIKAIK---------   72 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~---------   72 (292)
                      -|+|||.....|+.++++|.+.|+.|.+-...     ++..+.+.... ++....+..|++++++++++.+         
T Consensus        31 ~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~-----~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   31 AVLITGCDSGFGRLLAKKLDKKGFRVFAGCLT-----EEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             EEEEecCCcHHHHHHHHHHHhcCCEEEEEeec-----CchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            49999999999999999999999999988865     45555555554 7889999999999999988874         


Q ss_pred             cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcc
Q 039623           73 QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~  126 (292)
                      +-=.+|||||...                        +..++.++...+++.  .|+|.  |..|....      +...+
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~~------p~~g~  177 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVAL------PALGP  177 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCccC------ccccc
Confidence            3578899999653                        567888888888775  67765  45553222      12456


Q ss_pred             hHHHHHHHHHHHH-------HcCccEEEEecceeccccc
Q 039623          127 AYADKIKIRRAIE-------AEGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus       127 ~~~~K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~  158 (292)
                      |..||.++|.+..       ..|+++.++-||.|-++..
T Consensus       178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~  216 (322)
T KOG1610|consen  178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA  216 (322)
T ss_pred             chhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence            6669999998865       3799999999997776643

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.26  E-value=1.7e-11  Score=96.13  Aligned_cols=199  Identities=17%  Similarity=0.155  Sum_probs=137.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      ++++.|+.||.|+++++...+.++.|-.+.|+..+.      .++.+ ...+.++.+|....+-++..+.++..++.+++
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~------~l~sw-~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g  126 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ------TLSSW-PTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG  126 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc------hhhCC-CcccchhhccccccCcchhhhcCCcccHHHhc
Confidence            468899999999999999999999999999984422      11111 23577788888877767777888999999998


Q ss_pred             CCC-------c--hhHHHHHHHHHHhCCcceeec-cC--CCCCCccCCccCCCCcchHHHHHHHHHHHHH-cCccEEEEe
Q 039623           83 RGQ-------I--PEQAKIIAAVKEAGNVKRFLP-SE--FGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-EGIQYTYVS  149 (292)
Q Consensus        83 ~~~-------~--~~~~~l~~a~~~~~~~~~~i~-s~--~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-~~~~~~~ir  149 (292)
                      ...       +  ....+..+++.+.| +++|++ |.  ||.....       .+.|+.+|.++|..+.. .+.+-+++|
T Consensus       127 gfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~~~i-------~rGY~~gKR~AE~Ell~~~~~rgiilR  198 (283)
T KOG4288|consen  127 GFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLPPLI-------PRGYIEGKREAEAELLKKFRFRGIILR  198 (283)
T ss_pred             CccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCCCcc-------chhhhccchHHHHHHHHhcCCCceeec
Confidence            776       3  34556677888888 999998 43  3322222       35788899999987764 778889999


Q ss_pred             cceecccccccccc-----------CCCCCC--CCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCC
Q 039623          150 CNCFAGYFLPTLAQ-----------IGAPAP--PREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       150 ~~~~~~~~~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      ||.+++..--.-..           ......  ....++..  +.-....+.++++|.+.+.+++++...         +
T Consensus       199 PGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal~ai~dp~f~---------G  267 (283)
T KOG4288|consen  199 PGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAALKAIEDPDFK---------G  267 (283)
T ss_pred             cceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHHHhccCCCcC---------c
Confidence            99999861100000           000001  11122333  344668899999999999999988543         2


Q ss_pred             ccccHHHHHHHH
Q 039623          217 NVYSFNELVTLW  228 (292)
Q Consensus       217 ~~~t~~e~~~~~  228 (292)
                       .++..|+.++-
T Consensus       268 -vv~i~eI~~~a  278 (283)
T KOG4288|consen  268 -VVTIEEIKKAA  278 (283)
T ss_pred             -eeeHHHHHHHH
Confidence             45666665543

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.23  E-value=8.4e-11  Score=92.15  Aligned_cols=219  Identities=11%  Similarity=0.061  Sum_probs=129.6

Q ss_pred             EEEEccCCcchHHHHH-----HHHhCC----CCEEEEecCCCCCCCcchh-hHhhhhcCCcEEEECCCCCHHHHHHHHcc
Q 039623            4 TLIIGGTGYIGKKILE-----ASVKAG----HPTFALVRESTASDPVKGK-LIEIFKNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         4 vlItGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~-~~~~~~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      -++-+.+|+|+++|..     .+-+.+    |+|++++|.+.     +.+ ...++..+++..                +
T Consensus        15 a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg-----~~ritw~el~~~Gip~----------------s   73 (315)
T KOG3019|consen   15 AVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPG-----KARITWPELDFPGIPI----------------S   73 (315)
T ss_pred             CCCCccccchhccccCcccccccCCCCcccccceEEEecCCC-----CcccccchhcCCCCce----------------e
Confidence            4567889999988876     333333    89999999954     321 112222223222                2


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcc-eeec----cCCCCCCccCCccCCCC--cch
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVK-RFLP----SEFGNDVDRSQNVVEPA--KSA  127 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~-~~i~----s~~g~~~~~~~~~~~~~--~~~  127 (292)
                      |++.++.+|...                   +..++.++++...+.+.. .++.    +.|--....+.+...+.  -.+
T Consensus        74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~  153 (315)
T KOG3019|consen   74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI  153 (315)
T ss_pred             hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH
Confidence            333333333221                   778999999998776332 3332    22322221111111111  122


Q ss_pred             HH---HHHHHHHHHHHcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          128 YA---DKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       128 ~~---~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      ..   .+|+..........+.+++|.|.+.|..-.....+... .+-+.---+++|.|.++|||++|++..+..+++++.
T Consensus       154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lp-F~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~  232 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILP-FQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPS  232 (315)
T ss_pred             HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhh-hhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCC
Confidence            22   23433333333458999999999987643332222111 111112237889999999999999999999999976


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHHH
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLL  247 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
                      .. +++|-..|+ ..+..|+++.+.++++++. +..+|.....
T Consensus       233 v~-GViNgvAP~-~~~n~Ef~q~lg~aL~Rp~-~~pvP~fvvq  272 (315)
T KOG3019|consen  233 VK-GVINGVAPN-PVRNGEFCQQLGSALSRPS-WLPVPDFVVQ  272 (315)
T ss_pred             CC-ceecccCCC-ccchHHHHHHHHHHhCCCc-ccCCcHHHHH
Confidence            54 577877777 9999999999999999864 3344443333

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.21  E-value=1.8e-10  Score=90.91  Aligned_cols=142  Identities=18%  Similarity=0.225  Sum_probs=92.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      +++|||++|.+|..+++.|.+++ .+++++.|++... .+..+.++.+..  ..+.++.+|++|++++.++++       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~-~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS-AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS-TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc-HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            58999999999999999999998 5788999983222 344445555553  458888999999999999986       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc-chHHHH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK-SAYADK  131 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~-~~~~~K  131 (292)
                      .++.|||+++...                   +.+..++.++..... ++.++. |+.....+.      +.. .|....
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~------~gq~~YaaAN  153 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGG------PGQSAYAAAN  153 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-------TTBHHHHHHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccC------cchHhHHHHH
Confidence            3588999999864                   667888888887766 777764 443221111      123 444466


Q ss_pred             HHHHHHHH---HcCccEEEEecce
Q 039623          132 IKIRRAIE---AEGIQYTYVSCNC  152 (292)
Q Consensus       132 ~~~e~~~~---~~~~~~~~ir~~~  152 (292)
                      ..++.+.+   ..+.++..|..+.
T Consensus       154 ~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  154 AFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHHHHHhCCCCEEEEEccc
Confidence            66655554   3688888887544

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.19  E-value=3.1e-09  Score=88.93  Aligned_cols=200  Identities=15%  Similarity=0.095  Sum_probs=121.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh-----cCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK-----NLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-----~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      |.++|||++..||++++.+|.+.|.+|+..+|+     .++.+... .+.     ..++..+.+|+++.++..+++.   
T Consensus         9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRS-----EERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     44432221 111     2358899999998877666553   


Q ss_pred             -----cCCEEEEcCcCCC--------------------ch-hHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccC
Q 039623           73 -----QVDVVISTVSRGQ--------------------IP-EQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVV  121 (292)
Q Consensus        73 -----~~d~vi~~a~~~~--------------------~~-~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~  121 (292)
                           +.|+++|+||...                    +. ....+..++    ++.+ -..++. |+.+.....    .
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~----~  158 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPG----P  158 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCC----C
Confidence                 5899999999755                    12 122222222    2222 345555 333222221    0


Q ss_pred             CCCcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCC-CCCCCCCceeecCCCcceEEeeccchH
Q 039623          122 EPAKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG-APAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       122 ~~~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                      .+. .+|. +|..++++.+.       .|+++..+-||.+...+........ ......  ..........-.+...+|+
T Consensus       159 ~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~p~gr~g~~~ev  235 (270)
T KOG0725|consen  159 GSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKE--ATDSKGAVPLGRVGTPEEV  235 (270)
T ss_pred             CCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhh--hhccccccccCCccCHHHH
Confidence            112 4555 99999999874       5899999999988877511110000 000000  0000111112345778999


Q ss_pred             HHHHHHhhcCCc--CCCceEEEcC
Q 039623          193 ATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       193 a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +..+..++.+..  ..|+.+.+.|
T Consensus       236 a~~~~fla~~~asyitG~~i~vdg  259 (270)
T KOG0725|consen  236 AEAAAFLASDDASYITGQTIIVDG  259 (270)
T ss_pred             HHhHHhhcCcccccccCCEEEEeC
Confidence            999999987752  2345555543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.19  E-value=1.4e-10  Score=100.07  Aligned_cols=98  Identities=26%  Similarity=0.267  Sum_probs=84.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|+|+|+ |++|+.++..|.++| .+|++.+|+     .++.+.+......+++..+.|+.|.+.+.+++++.|+|||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs-----~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn   74 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRS-----KEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN   74 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence            899999997 999999999999999 999999999     7777666665556899999999999999999999999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      +++++.   ..+++++|.++| +.-+=.|
T Consensus        75 ~~p~~~---~~~i~ka~i~~g-v~yvDts   99 (389)
T COG1748          75 AAPPFV---DLTILKACIKTG-VDYVDTS   99 (389)
T ss_pred             eCCchh---hHHHHHHHHHhC-CCEEEcc
Confidence            999764   448999999998 5444333

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.18  E-value=6.1e-10  Score=86.24  Aligned_cols=140  Identities=14%  Similarity=0.147  Sum_probs=95.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QVD   75 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d   75 (292)
                      +||||||+..||..|++++++.|-+|++..|+     .++.+.... ..+++....+|+.|.++..+++.       ..+
T Consensus         7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~-----e~~L~e~~~-~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lN   80 (245)
T COG3967           7 TILITGGASGIGLALAKRFLELGNTVIICGRN-----EERLAEAKA-ENPEIHTEVCDVADRDSRRELVEWLKKEYPNLN   80 (245)
T ss_pred             EEEEeCCcchhhHHHHHHHHHhCCEEEEecCc-----HHHHHHHHh-cCcchheeeecccchhhHHHHHHHHHhhCCchh
Confidence            69999999999999999999999999999999     555533322 25678899999999887776664       479


Q ss_pred             EEEEcCcCCC-------------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcchH
Q 039623           76 VVISTVSRGQ-------------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        76 ~vi~~a~~~~-------------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|||||...                         +..+..++....+.. -..+|-  |..+...-.       ..|.|
T Consensus        81 vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~-------~~PvY  152 (245)
T COG3967          81 VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMA-------STPVY  152 (245)
T ss_pred             eeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCccc-------ccccc
Confidence            9999999865                         223333333333333 223433  444433222       34555


Q ss_pred             H-HHHHHHHHHH-------HcCccEEEEecceeccc
Q 039623          129 A-DKIKIRRAIE-------AEGIQYTYVSCNCFAGY  156 (292)
Q Consensus       129 ~-~K~~~e~~~~-------~~~~~~~~ir~~~~~~~  156 (292)
                      . +|+.+.-+-.       ..++++.-+-|++|-..
T Consensus       153 caTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         153 CATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            5 9998776643       24677777777777654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.17  E-value=8.8e-10  Score=86.71  Aligned_cols=169  Identities=15%  Similarity=0.138  Sum_probs=109.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEE-EEecCCCCCCCcc-hhhHhhh--hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTF-ALVRESTASDPVK-GKLIEIF--KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~-~~~r~~~~~~~~~-~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++|+||||+..||-.|+++|++. |-+++ +..|+     +++ .+.++..  .++++.+++.|+++.+++.+..+    
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~-----~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~   78 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARD-----PEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEK   78 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCC-----hHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHh
Confidence            57999999999999999999976 55544 45555     555 3333333  37899999999999888877764    


Q ss_pred             -----cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcc-----------eeec--cCC
Q 039623           73 -----QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVK-----------RFLP--SEF  110 (292)
Q Consensus        73 -----~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~-----------~~i~--s~~  110 (292)
                           +.+.+|++||...                        +..++.++-..++.. -+           .+|.  |..
T Consensus        79 iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaa-s~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   79 IVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAA-SKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             hcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHh-hcccCCcccccceeEEEeeccc
Confidence                 5799999999865                        334555555544443 12           3443  444


Q ss_pred             CCCCccCCccCCCCcchHHHHHHHHHHHHHc-------CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce
Q 039623          111 GNDVDRSQNVVEPAKSAYADKIKIRRAIEAE-------GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG  183 (292)
Q Consensus       111 g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~-------~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (292)
                      |....   ....+...|..||.++-.+.++.       ++-++.+.||||-...            .+           .
T Consensus       158 ~s~~~---~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM------------gg-----------~  211 (249)
T KOG1611|consen  158 GSIGG---FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM------------GG-----------K  211 (249)
T ss_pred             cccCC---CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC------------CC-----------C
Confidence            43222   12223445555999999888752       3445666788886431            11           1


Q ss_pred             EEeeccchHHHHHHHhhcC
Q 039623          184 AVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       184 ~~~i~v~D~a~~~~~~l~~  202 (292)
                      -..+++++-+..++..+.+
T Consensus       212 ~a~ltveeSts~l~~~i~k  230 (249)
T KOG1611|consen  212 KAALTVEESTSKLLASINK  230 (249)
T ss_pred             CcccchhhhHHHHHHHHHh
Confidence            1336777777777776654

>PLN00015 protochlorophyllide reductase

Probab=99.16  E-value=7.9e-10  Score=94.92  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=59.0

Q ss_pred             EEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            5 LIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         5 lItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      +||||++.||.+++++|.++| ++|++.+|+     .++.+.+ ..+.  ...+.++.+|++|.+++.++++       .
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~   75 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRD-----FLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP   75 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            599999999999999999999 999999987     4333222 2221  2357788999999998877764       4


Q ss_pred             CCEEEEcCcCC
Q 039623           74 VDVVISTVSRG   84 (292)
Q Consensus        74 ~d~vi~~a~~~   84 (292)
                      +|++||+||..
T Consensus        76 iD~lInnAG~~   86 (308)
T PLN00015         76 LDVLVCNAAVY   86 (308)
T ss_pred             CCEEEECCCcC
Confidence            79999999863

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.15  E-value=1.4e-10  Score=95.98  Aligned_cols=187  Identities=17%  Similarity=0.199  Sum_probs=116.1

Q ss_pred             ccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhh-hcCCcEEEECCCCCHHHHHHHHc--------cCC
Q 039623            8 GGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIF-KNLGVNVLYGDLQDHESLIKAIK--------QVD   75 (292)
Q Consensus         8 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~--------~~d   75 (292)
                      |++  +.||+.+++.|+++|++|++.+|+     .++. +.++.+ ...+.+++.+|++|++++.++++        ++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRN-----EEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESS-----HHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence            566  999999999999999999999998     4442 222333 23456689999999988877753        579


Q ss_pred             EEEEcCcCCC---------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           76 VVISTVSRGQ---------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        76 ~vi~~a~~~~---------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++||+++...                           +...+.+++.+++.   ..+|. |+.+.....      |....
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gsii~iss~~~~~~~------~~~~~  146 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG---GSIINISSIAAQRPM------PGYSA  146 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE---EEEEEEEEGGGTSBS------TTTHH
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCcccccchhhcccC------ccchh
Confidence            9999987643                           22334444433333   33443 332211111      23335


Q ss_pred             HH-HHHHHHHHHHH--------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          128 YA-DKIKIRRAIEA--------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       128 ~~-~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |. +|..++.+.+.        .|+++..|.||.+...........      .+.............+...+|+|.+++.
T Consensus       147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~------~~~~~~~~~~~pl~r~~~~~evA~~v~f  220 (241)
T PF13561_consen  147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN------EEFLEELKKRIPLGRLGTPEEVANAVLF  220 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH------HHHHHHHHHHSTTSSHBEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc------cchhhhhhhhhccCCCcCHHHHHHHHHH
Confidence            55 99999888773        589999999999986542221100      0000000000111234588999999999


Q ss_pred             hhcCCc--CCCceEEEcC
Q 039623          199 SIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~  214 (292)
                      ++.+..  ..|+++.+.|
T Consensus       221 L~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  221 LASDAASYITGQVIPVDG  238 (241)
T ss_dssp             HHSGGGTTGTSEEEEEST
T ss_pred             HhCccccCccCCeEEECC
Confidence            998652  3466666653

...

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.13  E-value=7.3e-10  Score=87.19  Aligned_cols=192  Identities=16%  Similarity=0.183  Sum_probs=128.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      +++++||+.|.||+.+.++|+++|..+.++..+     .|+.+....+    ....+-++++|+++..++.++++     
T Consensus         6 Kna~vtggagGIGl~~sk~Ll~kgik~~~i~~~-----~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    6 KNALVTGGAGGIGLATSKALLEKGIKVLVIDDS-----EENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             ceEEEecCCchhhHHHHHHHHHcCchheeehhh-----hhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            579999999999999999999999888888776     4444444443    34568999999999888888876     


Q ss_pred             --cCCEEEEcCcCCC---------------chhHHHHHHHHHHhC-Ccceeec---cCCCCCCccCCccCCCCcchHH-H
Q 039623           73 --QVDVVISTVSRGQ---------------IPEQAKIIAAVKEAG-NVKRFLP---SEFGNDVDRSQNVVEPAKSAYA-D  130 (292)
Q Consensus        73 --~~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~-~~~~~i~---s~~g~~~~~~~~~~~~~~~~~~-~  130 (292)
                        ..|++||.||...               +.++...++.+.+.. .-.-+|.   |++|-.+-       |..+.|. |
T Consensus        81 fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~-------p~~pVY~As  153 (261)
T KOG4169|consen   81 FGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM-------PVFPVYAAS  153 (261)
T ss_pred             hCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc-------ccchhhhhc
Confidence              4799999999876               778889999987653 1233432   77775443       3455565 8


Q ss_pred             HHHH---------HHHHHHcCccEEEEecceeccccccccccCC-CCCC---CCCceeecCCCcceEEeeccchHHHHHH
Q 039623          131 KIKI---------RRAIEAEGIQYTYVSCNCFAGYFLPTLAQIG-APAP---PREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       131 K~~~---------e~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      |+.+         +.+.++.|+++..++||.........+-... +...   ..+.+...+       --...+++..++
T Consensus       154 KaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~-------~q~~~~~a~~~v  226 (261)
T KOG4169|consen  154 KAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP-------KQSPACCAINIV  226 (261)
T ss_pred             ccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc-------cCCHHHHHHHHH
Confidence            8764         3444557999999999988765433331100 0000   000111111       125578899999


Q ss_pred             HhhcCCcCCCceEEEc
Q 039623          198 NSIDGPRTLNKTLYIR  213 (292)
Q Consensus       198 ~~l~~~~~~~~~~~~~  213 (292)
                      ++++.+.. |.+|-+.
T Consensus       227 ~aiE~~~N-Gaiw~v~  241 (261)
T KOG4169|consen  227 NAIEYPKN-GAIWKVD  241 (261)
T ss_pred             HHHhhccC-CcEEEEe
Confidence            99987542 3444443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.13  E-value=1.3e-09  Score=84.93  Aligned_cols=139  Identities=17%  Similarity=0.175  Sum_probs=93.4

Q ss_pred             ceEEEEccC-CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--------
Q 039623            2 AATLIIGGT-GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--------   72 (292)
Q Consensus         2 ~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--------   72 (292)
                      ++|||||.+ |.||.+|++.+.++|+.|.+..|+.+..     ..+.  ...++.....|+++++.+.+...        
T Consensus         8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M-----~~L~--~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPM-----AQLA--IQFGLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchH-----hhHH--HhhCCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            579999754 9999999999999999999999995443     2222  26689999999999988877653        


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~  127 (292)
                      +.|.++|+||..-                       +...+.+.+...++.  ..++.  |-.+.-.       -|....
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK--GtIVnvgSl~~~vp-------fpf~~i  151 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK--GTIVNVGSLAGVVP-------FPFGSI  151 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc--ceEEEecceeEEec-------cchhhh
Confidence            4799999999754                       222333333333322  34443  2222111       234555


Q ss_pred             HH-HHHHHHHHHHH-------cCccEEEEecceeccc
Q 039623          128 YA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGY  156 (292)
Q Consensus       128 ~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~  156 (292)
                      |. ||+++..+.+.       .|++++.+-+|-+...
T Consensus       152 YsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  152 YSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             hhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence            65 99999998875       4566666666555543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.12  E-value=5.1e-10  Score=87.57  Aligned_cols=96  Identities=21%  Similarity=0.277  Sum_probs=75.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |+++||||||++|. +++.|.+.|++|++++|+     +++.+.+.. +. ...+..+.+|+.|.+++.++++       
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~-----~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g   74 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARR-----EVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG   74 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECC-----HHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            58999999998876 999999999999999997     444433322 21 2467888999999999888775       


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhCCcc----eeec
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAGNVK----RFLP  107 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~----~~i~  107 (292)
                      .+|.+|+.+-   .....++.++|++.+ ++    ++++
T Consensus        75 ~id~lv~~vh---~~~~~~~~~~~~~~g-v~~~~~~~~h  109 (177)
T PRK08309         75 PFDLAVAWIH---SSAKDALSVVCRELD-GSSETYRLFH  109 (177)
T ss_pred             CCeEEEEecc---ccchhhHHHHHHHHc-cCCCCceEEE
Confidence            3577776444   568999999999999 88    7876

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.10  E-value=3.6e-09  Score=81.24  Aligned_cols=184  Identities=11%  Similarity=0.070  Sum_probs=111.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc-CCcEEEECCCCCHHHHHHHHc-------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN-LGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      +..+||||+..||+++++.|.++|++|.+.++++...    .+....+.. -+-..+.+|+++++++...++       .
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A----~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA----EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH----HHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            3478999999999999999999999999999984321    122223322 245677999999888777554       5


Q ss_pred             CCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcc-eeec--cCCCCCCccCCccCCCCcch
Q 039623           74 VDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVK-RFLP--SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        74 ~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~-~~i~--s~~g~~~~~~~~~~~~~~~~  127 (292)
                      +++++||||...                       +..++...+++...++-. .+|-  |.-|.-...      -..+|
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~------GQtnY  164 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF------GQTNY  164 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc------cchhh
Confidence            899999999987                       334555555533333111 5554  433322211      12344


Q ss_pred             HHHHHH-------HHHHHHHcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIK-------IRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~-------~e~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .++|..       +.+.+...++++..+.||.+..+...-.....+ ...-+.++       ...+-..+|+|..+..++
T Consensus       165 AAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~-~ki~~~iP-------mgr~G~~EevA~~V~fLA  236 (256)
T KOG1200|consen  165 AASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVL-DKILGMIP-------MGRLGEAEEVANLVLFLA  236 (256)
T ss_pred             hhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHH-HHHHccCC-------ccccCCHHHHHHHHHHHh
Confidence            446643       233444568999999998887653211111100 00001111       112335689999999999


Q ss_pred             cCC
Q 039623          201 DGP  203 (292)
Q Consensus       201 ~~~  203 (292)
                      ...
T Consensus       237 S~~  239 (256)
T KOG1200|consen  237 SDA  239 (256)
T ss_pred             ccc
Confidence            554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.10  E-value=1.9e-09  Score=91.69  Aligned_cols=156  Identities=18%  Similarity=0.169  Sum_probs=103.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++|||||+.||..++++|..+|.+|+...|+.......+.+.........+.++.+|++|.+++.+..+       ..
T Consensus        36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l  115 (314)
T KOG1208|consen   36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL  115 (314)
T ss_pred             cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence            46899999999999999999999999999999942210111111122335568889999999988877654       57


Q ss_pred             CEEEEcCcCCC---------------------chhHHHHHHHHHHhCCcceeec-cCCCC----CCccCCccCC---CCc
Q 039623           75 DVVISTVSRGQ---------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGN----DVDRSQNVVE---PAK  125 (292)
Q Consensus        75 d~vi~~a~~~~---------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~----~~~~~~~~~~---~~~  125 (292)
                      |++|++||...                     ...+..+++.++.... .|+|. |+...    +.........   ...
T Consensus       116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~-~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~  194 (314)
T KOG1208|consen  116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP-SRIVNVSSILGGGKIDLKDLSGEKAKLYSSD  194 (314)
T ss_pred             cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC-CCEEEEcCccccCccchhhccchhccCccch
Confidence            99999999866                     3567777888877653 56665 44322    1111111111   111


Q ss_pred             chHH-HHHHHHHHHHH------cCccEEEEecceeccccc
Q 039623          126 SAYA-DKIKIRRAIEA------EGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus       126 ~~~~-~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~  158 (292)
                      ..|. ||.+...+..+      .|+....+-||.+..+.+
T Consensus       195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  195 AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence            2244 88875444432      267778888999987743

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.07  E-value=4.6e-09  Score=89.45  Aligned_cols=192  Identities=9%  Similarity=0.036  Sum_probs=106.2

Q ss_pred             ceEEEEcc--CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh------------hhhc----CCcEEEECCC--
Q 039623            2 AATLIIGG--TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE------------IFKN----LGVNVLYGDL--   61 (292)
Q Consensus         2 ~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------------~~~~----~~v~~v~~D~--   61 (292)
                      |+++||||  +..||.++++.|.++|++|++ .|+     .++.+.+.            .+..    .....+.+|+  
T Consensus        10 k~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730         10 KRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW-----VPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC-----cchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            57999999  789999999999999999988 664     22221111            1111    1145778888  


Q ss_pred             CCH------------------HHHHHHHc-------cCCEEEEcCcCC----C---------------------chhHHH
Q 039623           62 QDH------------------ESLIKAIK-------QVDVVISTVSRG----Q---------------------IPEQAK   91 (292)
Q Consensus        62 ~d~------------------~~~~~~~~-------~~d~vi~~a~~~----~---------------------~~~~~~   91 (292)
                      .+.                  +++.++++       .+|++|||||..    .                     +..++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            322                  25555543       489999999632    1                     233444


Q ss_pred             HHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc-chHHHHHHHHHHHHH--------cCccEEEEecceecccccccc
Q 039623           92 IIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK-SAYADKIKIRRAIEA--------EGIQYTYVSCNCFAGYFLPTL  161 (292)
Q Consensus        92 l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~-~~~~~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~~~~~  161 (292)
                      ++..+++.   .++|. |+.......     +... .|..+|..++.+.+.        .|+++..|.||++-.......
T Consensus       164 ~~p~m~~~---G~II~isS~a~~~~~-----p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~  235 (303)
T PLN02730        164 FGPIMNPG---GASISLTYIASERII-----PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI  235 (303)
T ss_pred             HHHHHhcC---CEEEEEechhhcCCC-----CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc
Confidence            44444432   34554 332211111     1122 455599999888763        257777777877765432211


Q ss_pred             ccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEc
Q 039623          162 AQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIR  213 (292)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~  213 (292)
                      ..      ................+...+|++.++++++....  ..++.+.+.
T Consensus       236 ~~------~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vd  283 (303)
T PLN02730        236 GF------IDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVD  283 (303)
T ss_pred             cc------cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence            00      00000000000001134578999999999997542  235555554

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.07  E-value=1.1e-09  Score=82.49  Aligned_cols=185  Identities=14%  Similarity=0.146  Sum_probs=120.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      +.|++||+.-.||+.++++|.+.|.+|+++.|+     ++....+-.....-++.+++|+++.+.+.+++.   ..|.++
T Consensus         8 ~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~-----~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV   82 (245)
T KOG1207|consen    8 VIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARN-----EANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLV   82 (245)
T ss_pred             eEEEeecccccccHHHHHHHHhcCCEEEEEecC-----HHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence            358999999999999999999999999999999     666554444444559999999999999988887   479999


Q ss_pred             EcCcCCC-----------------------chhHHHHHHHHHHhCCcce-eec-cCCCCCCccCCccCCCCcchHHHHHH
Q 039623           79 STVSRGQ-----------------------IPEQAKIIAAVKEAGNVKR-FLP-SEFGNDVDRSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        79 ~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~-~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~  133 (292)
                      |+||...                       +..++.+++-...++ ++- ++- |+-..     ..+......|.++|.+
T Consensus        83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~-~~GaIVNvSSqas-----~R~~~nHtvYcatKaA  156 (245)
T KOG1207|consen   83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQ-IKGAIVNVSSQAS-----IRPLDNHTVYCATKAA  156 (245)
T ss_pred             ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhcc-CCceEEEecchhc-----ccccCCceEEeecHHH
Confidence            9999754                       233334333333333 332 222 22211     1122224456669988


Q ss_pred             HHHHHHH-------cCccEEEEecceecccc-ccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYF-LPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      ...+.+.       ..+++..+.|..++... ..++....   +.+....-.    ....|.-++.+++++..++.+..
T Consensus       157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~---K~k~mL~ri----Pl~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPD---KKKKMLDRI----PLKRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCch---hccchhhhC----chhhhhHHHHHHhhheeeeecCc
Confidence            8776653       34677777888887532 22222221   111111111    12356788999999999998754

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.06  E-value=9.6e-09  Score=85.44  Aligned_cols=144  Identities=17%  Similarity=0.208  Sum_probs=94.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc----CCcEEEECCCCC-HHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN----LGVNVLYGDLQD-HESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~v~~v~~D~~d-~~~~~~~~~----   72 (292)
                      ++|+||||++.||..+++.|.+.|++|++..|+....   +.+.+.....    ..+.....|+++ .+++..+++    
T Consensus         6 ~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEE---AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh---hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999998874321   2222233323    467788899998 877776664    


Q ss_pred             ---cCCEEEEcCcCC----C----------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCC-Ccch
Q 039623           73 ---QVDVVISTVSRG----Q----------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEP-AKSA  127 (292)
Q Consensus        73 ---~~d~vi~~a~~~----~----------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~-~~~~  127 (292)
                         ..|+++|+||..    .                +.+...+.+++...-.-++++. |+.... ..     .+ ...|
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~-----~~~~~~Y  156 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG-----PPGQAAY  156 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC-----CCCcchH
Confidence               389999999974    2                2233333333222210015555 444332 22     11 2456


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceec
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFA  154 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~  154 (292)
                      ..+|..+..+.+.       .|+.+..+.||.+.
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            6699998776653       57888888898544

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.93  E-value=5.6e-09  Score=86.22  Aligned_cols=96  Identities=18%  Similarity=0.209  Sum_probs=77.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||+||||. |+.|++.|.+.|++|++.+|+...     .+.   +...+...+..+..|.+++.+.+.  ++|+||+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~-----~~~---~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG-----KHL---YPIHQALTVHTGALDPQELREFLKRHSIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc-----ccc---ccccCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence            68999999999 999999999999999999998432     211   212334445566678888888886  5999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ++.++....++++.++|++.+ ++.+=+
T Consensus        72 AtHPfA~~is~~a~~a~~~~~-ipylR~   98 (256)
T TIGR00715        72 ATHPFAAQITTNATAVCKELG-IPYVRF   98 (256)
T ss_pred             cCCHHHHHHHHHHHHHHHHhC-CcEEEE
Confidence            999888899999999999999 776655

This enzyme was found to be a monomer by gel filtration.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.93  E-value=5.8e-08  Score=80.36  Aligned_cols=182  Identities=16%  Similarity=0.113  Sum_probs=109.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h----hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F----KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~----~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      +|+|||++..+|..++..+..+|++|+++.|+     ..|...+.. +    ....+.+..+|+.|.++....++     
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~-----~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~  109 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARS-----GKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDL  109 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEecc-----HHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhc
Confidence            69999999999999999999999999999998     444432222 1    11225688899999888877775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec--cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP--SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~  125 (292)
                        .+|.+|+|||..-                   ..++.+++++    +++.....+++.  |..+.-.-.      -.+
T Consensus       110 ~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~------Gys  183 (331)
T KOG1210|consen  110 EGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY------GYS  183 (331)
T ss_pred             cCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc------ccc
Confidence              4799999999765                   2344444444    333321224443  433321111      123


Q ss_pred             chHHHHHHHHHHHH-------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIE-------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~-------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|-.+|.+...+.+       ..++.++.+-|+-+-.+.+..-..     .+.....+...+.   +.+..+++|.+++.
T Consensus       184 aYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~-----tkP~~t~ii~g~s---s~~~~e~~a~~~~~  255 (331)
T KOG1210|consen  184 AYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK-----TKPEETKIIEGGS---SVIKCEEMAKAIVK  255 (331)
T ss_pred             ccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc-----cCchheeeecCCC---CCcCHHHHHHHHHh
Confidence            34346665443332       257777666665554332211100     1122222222222   45889999999998


Q ss_pred             hhcCC
Q 039623          199 SIDGP  203 (292)
Q Consensus       199 ~l~~~  203 (292)
                      =+...
T Consensus       256 ~~~rg  260 (331)
T KOG1210|consen  256 GMKRG  260 (331)
T ss_pred             HHhhc
Confidence            77654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.87  E-value=3.5e-08  Score=81.67  Aligned_cols=141  Identities=18%  Similarity=0.195  Sum_probs=96.7

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHH----HHHHHc--c
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHES----LIKAIK--Q   73 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~----~~~~~~--~   73 (292)
                      .+|||||..||++.+++|.++|++|..++|+     .+|++.+...    ....+.++..|.++.+.    +.+.+.  +
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt-----~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFNVVLISRT-----QEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            5799999999999999999999999999999     7777655433    22447888999997654    444444  5


Q ss_pred             CCEEEEcCcCCC-------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           74 VDVVISTVSRGQ-------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      +.++|||+|...                         ...++.++..+.+.+ -..++. ++.+...+.      |....
T Consensus       127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~------p~~s~  199 (312)
T KOG1014|consen  127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPT------PLLSV  199 (312)
T ss_pred             eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccC------hhHHH
Confidence            789999999765                         234555666666554 344444 333322221      34445


Q ss_pred             HH-HHHHHHHHHH-------HcCccEEEEecceeccc
Q 039623          128 YA-DKIKIRRAIE-------AEGIQYTYVSCNCFAGY  156 (292)
Q Consensus       128 ~~-~K~~~e~~~~-------~~~~~~~~ir~~~~~~~  156 (292)
                      |. +|.-++.+-+       ..|+.+-.+-|..+.+.
T Consensus       200 ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk  236 (312)
T KOG1014|consen  200 YSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK  236 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence            55 8886555433       35788888888887755

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.86  E-value=1.4e-08  Score=89.90  Aligned_cols=93  Identities=26%  Similarity=0.349  Sum_probs=73.4

Q ss_pred             EEEEccCCcchHHHHHHHHhCC-C-CEEEEecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            4 TLIIGGTGYIGKKILEASVKAG-H-PTFALVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |+|+|+ |++|+.+++.|.+.+ + +|++.+|+     .++.+.+.. +...+++.+..|+.|.+++.++++++|+||||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~-----~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRN-----PEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESS-----HHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECC-----HHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEEC
Confidence            799999 999999999999986 5 89999999     677644433 25678999999999999999999999999999


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +|+.   ....++++|.++| + +++-
T Consensus        75 ~gp~---~~~~v~~~~i~~g-~-~yvD   96 (386)
T PF03435_consen   75 AGPF---FGEPVARACIEAG-V-HYVD   96 (386)
T ss_dssp             SSGG---GHHHHHHHHHHHT---EEEE
T ss_pred             Cccc---hhHHHHHHHHHhC-C-Ceec
Confidence            9976   6778999999988 3 4543

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.85  E-value=4.9e-08  Score=80.79  Aligned_cols=177  Identities=13%  Similarity=0.016  Sum_probs=106.5

Q ss_pred             HHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc----cCCEEEEcCcCCC-------
Q 039623           17 ILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK----QVDVVISTVSRGQ-------   85 (292)
Q Consensus        17 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~vi~~a~~~~-------   85 (292)
                      +++.|+++|++|++++|+.     ++.+        ..+++.+|++|.+++.++++    ++|++||+||...       
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~-----~~~~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~   67 (241)
T PRK12428          1 TARLLRFLGARVIGVDRRE-----PGMT--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV   67 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCc-----chhh--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence            4688999999999999983     3221        13467999999999988886    5899999999643       


Q ss_pred             ----chhHHHHHHHHHHh--CCcceeec-cC---CCCCCcc-----------C--------CccCCCCcchHHHHHHHHH
Q 039623           86 ----IPEQAKIIAAVKEA--GNVKRFLP-SE---FGNDVDR-----------S--------QNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        86 ----~~~~~~l~~a~~~~--~~~~~~i~-s~---~g~~~~~-----------~--------~~~~~~~~~~~~~K~~~e~  136 (292)
                          +.++..+++++.+.  . -.++|+ |+   ++.....           .        ..+......|..+|..++.
T Consensus        68 ~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  146 (241)
T PRK12428         68 ARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL  146 (241)
T ss_pred             hhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence                55666777776653  2 246665 33   2211000           0        0122233455559999876


Q ss_pred             HHH--------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CC
Q 039623          137 AIE--------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TL  206 (292)
Q Consensus       137 ~~~--------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~  206 (292)
                      +.+        ..|+++..++||.+.+.........    .......  ........+...+|+|+++..++....  ..
T Consensus       147 ~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~  220 (241)
T PRK12428        147 WTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM----LGQERVD--SDAKRMGRPATADEQAAVLVFLCSDAARWIN  220 (241)
T ss_pred             HHHHHHHHhhhccCeEEEEeecCCccCcccccchhh----hhhHhhh--hcccccCCCCCHHHHHHHHHHHcChhhcCcc
Confidence            653        2478999999998876643321110    0000000  000011234678999999999886532  23


Q ss_pred             CceEEEc
Q 039623          207 NKTLYIR  213 (292)
Q Consensus       207 ~~~~~~~  213 (292)
                      |+.+.+.
T Consensus       221 G~~i~vd  227 (241)
T PRK12428        221 GVNLPVD  227 (241)
T ss_pred             CcEEEec
Confidence            4444443

>PRK06720 hypothetical protein; Provisional

Probab=98.80  E-value=3.7e-08  Score=76.64  Aligned_cols=79  Identities=14%  Similarity=0.175  Sum_probs=60.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +.++||||+|.||+.+++.|.++|++|.+.+|+.     +..+.. +.+.  ......+.+|++|.+++.++++      
T Consensus        17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQ-----ESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999999873     222111 2221  2346678999999988877553      


Q ss_pred             -cCCEEEEcCcCCC
Q 039623           73 -QVDVVISTVSRGQ   85 (292)
Q Consensus        73 -~~d~vi~~a~~~~   85 (292)
                       .+|++||+||...
T Consensus        92 G~iDilVnnAG~~~  105 (169)
T PRK06720         92 SRIDMLFQNAGLYK  105 (169)
T ss_pred             CCCCEEEECCCcCC
Confidence             5899999999643

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.76  E-value=3.6e-07  Score=77.82  Aligned_cols=33  Identities=21%  Similarity=0.097  Sum_probs=28.8

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |.++||||+  ..||+++++.|.++|++|.+.+|.
T Consensus         9 k~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          9 KIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            469999994  789999999999999999986643

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.75  E-value=2e-07  Score=98.07  Aligned_cols=149  Identities=13%  Similarity=0.093  Sum_probs=101.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCC-----------------------------C-----------
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASD-----------------------------P-----------   40 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-----------------------------~-----------   40 (292)
                      +.+|||||+|.||..+++.|.++ |++|++++|+.....                             +           
T Consensus      1998 ~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~ 2077 (2582)
T TIGR02813      1998 DVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVL 2077 (2582)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccc
Confidence            46999999999999999999998 699999999831000                             0           


Q ss_pred             ---cchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc------cCCEEEEcCcCCC-------------------chhHH
Q 039623           41 ---VKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK------QVDVVISTVSRGQ-------------------IPEQA   90 (292)
Q Consensus        41 ---~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------~~d~vi~~a~~~~-------------------~~~~~   90 (292)
                         +..+.++.+.  ...+.++.+|++|.+++.++++      .+|.|||+||...                   +.+..
T Consensus      2078 ~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~ 2157 (2582)
T TIGR02813      2078 SSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLL 2157 (2582)
T ss_pred             hhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHH
Confidence               0001111121  2357889999999998888775      4799999999744                   67888


Q ss_pred             HHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-----cCccEEEEecceeccc
Q 039623           91 KIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-----EGIQYTYVSCNCFAGY  156 (292)
Q Consensus        91 ~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-----~~~~~~~ir~~~~~~~  156 (292)
                      ++++++.... .+++|. |+.......     .....|..+|..+..+...     .++++..+.||.+-+.
T Consensus      2158 ~Ll~al~~~~-~~~IV~~SSvag~~G~-----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2158 SLLAALNAEN-IKLLALFSSAAGFYGN-----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHHhC-CCeEEEEechhhcCCC-----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            8999988765 666664 443322222     0123444499887665543     2567788888776553

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.66  E-value=1.2e-07  Score=80.97  Aligned_cols=100  Identities=17%  Similarity=0.161  Sum_probs=73.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+||+|+|++|.+|+.++..|...+  .++..+++..     .+.+.+ ++.+........+.+|+.++.+.++++|+||
T Consensus         8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~-----~~g~a~-Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVV   81 (321)
T PTZ00325          8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG-----APGVAA-DLSHIDTPAKVTGYADGELWEKALRGADLVL   81 (321)
T ss_pred             CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC-----Cccccc-chhhcCcCceEEEecCCCchHHHhCCCCEEE
Confidence            7899999999999999999998665  6899998831     111111 1112222334456666555567899999999


Q ss_pred             EcCcCCC-------------chhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +++|...             +...+++++++++++ ++++|.
T Consensus        82 itaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~ivi  122 (321)
T PTZ00325         82 ICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVG  122 (321)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence            9999855             457889999999998 888776

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.58  E-value=1.6e-07  Score=76.75  Aligned_cols=68  Identities=24%  Similarity=0.304  Sum_probs=48.4

Q ss_pred             cCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC--HHHHHHHHccCCEEEEcCcCCC
Q 039623            9 GTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD--HESLIKAIKQVDVVISTVSRGQ   85 (292)
Q Consensus         9 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d--~~~~~~~~~~~d~vi~~a~~~~   85 (292)
                      +||++|++|+++|+++|++|++++|.....         .....+++++..+..+  .+.+.+.+.++|+|||+||...
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~---------~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKTAVK---------PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECccccc---------CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            369999999999999999999998863211         0012356666654322  2455566778999999999865

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.58  E-value=2.8e-07  Score=73.66  Aligned_cols=79  Identities=22%  Similarity=0.281  Sum_probs=63.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++++|+||+|.+|+.+++.|.+.|++|++++|+     .++.+.+....  ..+..+...|..+.+++.++++++|+||+
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~-----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRD-----LERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            579999999999999999999999999999998     55554433221  22566777888899999999999999999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      +.+...
T Consensus       104 at~~g~  109 (194)
T cd01078         104 AGAAGV  109 (194)
T ss_pred             CCCCCc
Confidence            776543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.55  E-value=2.5e-07  Score=77.68  Aligned_cols=91  Identities=25%  Similarity=0.314  Sum_probs=71.1

Q ss_pred             EEEEccCCcchHHHHHHHHh----CCCCEEEEecCCCCCCCcchhhH-hhhhc------CCcEEEECCCCCHHHHHHHHc
Q 039623            4 TLIIGGTGYIGKKILEASVK----AGHPTFALVRESTASDPVKGKLI-EIFKN------LGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~-~~~~~------~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      ++|.|||||.|..+++++.+    .|...-+..|+     .+|++.. +....      +...++.+|..|++++.++.+
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn-----~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRN-----EKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCC-----HHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh
Confidence            89999999999999999998    57788888898     6666433 22211      223489999999999999999


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+.+|+||+|+.. -.-..+.++|.++|
T Consensus        83 ~~~vivN~vGPyR-~hGE~VVkacienG  109 (423)
T KOG2733|consen   83 QARVIVNCVGPYR-FHGEPVVKACIENG  109 (423)
T ss_pred             hhEEEEeccccce-ecCcHHHHHHHHcC
Confidence            9999999999986 33455666666665

>PRK09620 hypothetical protein; Provisional

Probab=98.54  E-value=2.4e-07  Score=75.49  Aligned_cols=78  Identities=23%  Similarity=0.305  Sum_probs=55.0

Q ss_pred             ceEEEEccC----------------CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH
Q 039623            2 AATLIIGGT----------------GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~   65 (292)
                      |+||||+|.                ||+|++|+++|+++|++|+++++..+.. +...   .  .......+.++....+
T Consensus         4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~-~~~~---~--~~~~~~~V~s~~d~~~   77 (229)
T PRK09620          4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEK-PNDI---N--NQLELHPFEGIIDLQD   77 (229)
T ss_pred             CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCC-Cccc---C--CceeEEEEecHHHHHH
Confidence            689999875                9999999999999999999998753211 1100   0  0123344566333345


Q ss_pred             HHHHHHc--cCCEEEEcCcCCC
Q 039623           66 SLIKAIK--QVDVVISTVSRGQ   85 (292)
Q Consensus        66 ~~~~~~~--~~d~vi~~a~~~~   85 (292)
                      .+.+++.  ++|+|||+|+...
T Consensus        78 ~l~~~~~~~~~D~VIH~AAvsD   99 (229)
T PRK09620         78 KMKSIITHEKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHhcccCCCEEEECccccc
Confidence            6777775  6999999999876

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.45  E-value=5.7e-07  Score=77.39  Aligned_cols=94  Identities=16%  Similarity=0.069  Sum_probs=60.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-------CCEEEEecCCCCCCCcchhh-HhhhhcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-------HPTFALVRESTASDPVKGKL-IEIFKNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      .||+||||+|++|++++..|+..+       .++++++++...   ++.+. ..++.+. ......|+....++.+.+++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~---~~~~g~~~Dl~d~-~~~~~~~~~~~~~~~~~l~~   78 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL---KALEGVVMELQDC-AFPLLKSVVATTDPEEAFKD   78 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc---ccccceeeehhhc-cccccCCceecCCHHHHhCC
Confidence            479999999999999999998854       589999996431   11110 0011110 00112344444566788899


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHh
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEA   99 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~   99 (292)
                      +|+|||+||...             +...+.+.+.+.++
T Consensus        79 aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~  117 (325)
T cd01336          79 VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY  117 (325)
T ss_pred             CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999865             33345666666666

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=98.43  E-value=8.6e-07  Score=75.88  Aligned_cols=148  Identities=15%  Similarity=0.142  Sum_probs=92.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      +||+|+||+|.+|+.++..|...+  .++..++++. .. .+..    ++.+........++.+.+++.+.++++|+|||
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~-g~a~----Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVi   92 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TP-GVAA----DVSHINTPAQVRGFLGDDQLGDALKGADLVII   92 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CC-eeEc----hhhhCCcCceEEEEeCCCCHHHHcCCCCEEEE
Confidence            479999999999999999998776  4799999875 11 1111    22222222233344444457788999999999


Q ss_pred             cCcCCC-------------chhHHHHHHHHHHhCCcceeec-cCCCCC------Cc--cCCccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-SEFGND------VD--RSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~------~~--~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      +||...             ....+.+.+++++++ .+.++. ++=..+      ..  .....++|.+.++.++...+++
T Consensus        93 tAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl  171 (323)
T PLN00106         93 PAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRA  171 (323)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHH
Confidence            999755             667889999999998 666654 221111      00  0022233333333354443332


Q ss_pred             ----HHHcCccEEEEecceeccc
Q 039623          138 ----IEAEGIQYTYVSCNCFAGY  156 (292)
Q Consensus       138 ----~~~~~~~~~~ir~~~~~~~  156 (292)
                          .+..+++...+..-++++.
T Consensus       172 ~~~lA~~lgv~~~~V~~~ViGeH  194 (323)
T PLN00106        172 NTFVAEKKGLDPADVDVPVVGGH  194 (323)
T ss_pred             HHHHHHHhCCChhheEEEEEEeC
Confidence                2346888777777777766

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.31  E-value=1.6e-06  Score=72.31  Aligned_cols=76  Identities=21%  Similarity=0.197  Sum_probs=63.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      .++|.|||||.|..++++|..+|.+-..-.|+     ..|.+.+.....++.....  +.+++.+.+++...++|+||+|
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs-----~~kl~~l~~~LG~~~~~~p--~~~p~~~~~~~~~~~VVlncvG   80 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRS-----SAKLDALRASLGPEAAVFP--LGVPAALEAMASRTQVVLNCVG   80 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCC-----HHHHHHHHHhcCccccccC--CCCHHHHHHHHhcceEEEeccc
Confidence            48999999999999999999999988777888     7888777665555544444  4458999999999999999999


Q ss_pred             CCC
Q 039623           83 RGQ   85 (292)
Q Consensus        83 ~~~   85 (292)
                      +..
T Consensus        81 Pyt   83 (382)
T COG3268          81 PYT   83 (382)
T ss_pred             ccc
Confidence            976

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.31  E-value=1.9e-06  Score=65.18  Aligned_cols=77  Identities=19%  Similarity=0.209  Sum_probs=64.2

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cCCE
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QVDV   76 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~   76 (292)
                      -+|||+...+|...++.|.++|..|..++...     +|-.........++.+...|++++.++..++.       ..|+
T Consensus        12 alvtggasglg~ataerlakqgasv~lldlp~-----skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   12 ALVTGGASGLGKATAERLAKQGASVALLDLPQ-----SKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             EEeecCcccccHHHHHHHHhcCceEEEEeCCc-----ccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            58999999999999999999999999999873     33333344446788999999999999988875       4799


Q ss_pred             EEEcCcCCC
Q 039623           77 VISTVSRGQ   85 (292)
Q Consensus        77 vi~~a~~~~   85 (292)
                      .+||||...
T Consensus        87 ~vncagia~   95 (260)
T KOG1199|consen   87 LVNCAGIAY   95 (260)
T ss_pred             eeeccceee
Confidence            999999755

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.28  E-value=4.7e-06  Score=72.20  Aligned_cols=81  Identities=27%  Similarity=0.309  Sum_probs=58.9

Q ss_pred             ceEEEEccCCcchHH--HHHHHHhCCCCEEEEecCCCCCCCcc--------hhhHhh-hhc--CCcEEEECCCCCHHHHH
Q 039623            2 AATLIIGGTGYIGKK--ILEASVKAGHPTFALVRESTASDPVK--------GKLIEI-FKN--LGVNVLYGDLQDHESLI   68 (292)
Q Consensus         2 ~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~-~~~--~~v~~v~~D~~d~~~~~   68 (292)
                      |++||||+++.+|.+  +++.| +.|.+|.++++..... ..+        .+.+.. ...  ..+..+.+|+++++++.
T Consensus        42 K~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~-~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~  119 (398)
T PRK13656         42 KKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGT-EKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ  119 (398)
T ss_pred             CEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchh-hhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            679999999999999  89999 9999999998642211 100        111221 222  23567899999998877


Q ss_pred             HHHc-------cCCEEEEcCcCC
Q 039623           69 KAIK-------QVDVVISTVSRG   84 (292)
Q Consensus        69 ~~~~-------~~d~vi~~a~~~   84 (292)
                      ++++       ++|++||++|..
T Consensus       120 ~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        120 KVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHhcCCCCEEEECCccC
Confidence            7764       589999999987

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.27  E-value=6e-06  Score=71.55  Aligned_cols=88  Identities=19%  Similarity=0.282  Sum_probs=60.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCC---EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHP---TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |++|+|.||||++|+.|++.|.+++|.   +.++.+..+..   +.  +.   ..+.+....|+.+.     .+.++|+|
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g---~~--l~---~~g~~i~v~d~~~~-----~~~~vDvV   67 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG---KE--LS---FKGKELKVEDLTTF-----DFSGVDIA   67 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC---Ce--ee---eCCceeEEeeCCHH-----HHcCCCEE
Confidence            789999999999999999999998765   47777763321   11  11   12345555566432     24689999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      |.++|..   .++.+.....++| + .+|
T Consensus        68 f~A~g~g---~s~~~~~~~~~~G-~-~VI   91 (334)
T PRK14874         68 LFSAGGS---VSKKYAPKAAAAG-A-VVI   91 (334)
T ss_pred             EECCChH---HHHHHHHHHHhCC-C-EEE
Confidence            9998754   4566666666677 5 444

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.25  E-value=2.1e-05  Score=62.56  Aligned_cols=192  Identities=16%  Similarity=0.127  Sum_probs=110.2

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-cCC-cEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-NLG-VNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~-v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |++||+|-.  --|+..+++.|.++|.++......     +.-.+.++++. ..+ --++++|+++.+++.++|+     
T Consensus         7 K~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~-----e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           7 KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQG-----ERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ceEEEEEecccccHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            689999865  568999999999999998888776     22222223332 222 4578999999999988885     


Q ss_pred             --cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC----Ccceeec-cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG----NVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~----~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                        +.|.++|+.+...                    ....-.+...++...    +-..++. +-+|....      -|..
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~------vPnY  155 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV------VPNY  155 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee------cCCC
Confidence              5899999999876                    111222222222221    0122332 22332222      2344


Q ss_pred             chHH-HHHHHHHHHHH-------cCccEEEEecceecc---ccccccccCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          126 SAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAG---YFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       126 ~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      +... .|+..|.-++-       .|+++..|..|.+-.   ..+..+....         .....-...+.-++++|++.
T Consensus       156 NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l---------~~~e~~aPl~r~vt~eeVG~  226 (259)
T COG0623         156 NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKML---------KENEANAPLRRNVTIEEVGN  226 (259)
T ss_pred             chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHH---------HHHHhhCCccCCCCHHHhhh
Confidence            4555 89988876652       456666665555432   1122221110         00001111233367889999


Q ss_pred             HHHHhhcCC--cCCCceEEEc
Q 039623          195 YTINSIDGP--RTLNKTLYIR  213 (292)
Q Consensus       195 ~~~~~l~~~--~~~~~~~~~~  213 (292)
                      ..+.++.+=  -..|++.|+.
T Consensus       227 tA~fLlSdLssgiTGei~yVD  247 (259)
T COG0623         227 TAAFLLSDLSSGITGEIIYVD  247 (259)
T ss_pred             hHHHHhcchhcccccceEEEc
Confidence            888888653  2346777775

>PRK05086 malate dehydrogenase; Provisional

Probab=98.24  E-value=5.8e-06  Score=70.80  Aligned_cols=98  Identities=14%  Similarity=0.115  Sum_probs=65.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHh-C--CCCEEEEecCCCCCCCcchhhHhhhhc-CCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVK-A--GHPTFALVRESTASDPVKGKLIEIFKN-LGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |||+|+||||.+|++++..|.. .  ++++.+++|++... ....    ++.+ .....+.+  .+.+++.+.++++|+|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~-g~al----Dl~~~~~~~~i~~--~~~~d~~~~l~~~DiV   73 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP-GVAV----DLSHIPTAVKIKG--FSGEDPTPALEGADVV   73 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc-ceeh----hhhcCCCCceEEE--eCCCCHHHHcCCCCEE
Confidence            7999999999999999998855 2  46788888863210 1011    1222 11223333  2233455677899999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhCCcceeec
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      |.++|...             ....+.+++++++++ .+.++.
T Consensus        74 IitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivi  115 (312)
T PRK05086         74 LISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIG  115 (312)
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence            99999855             347788899999887 666553

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.21  E-value=1.4e-05  Score=65.23  Aligned_cols=97  Identities=25%  Similarity=0.423  Sum_probs=72.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |+++|.| .|.+|+.+++.|.+.||+|.+++++     +++.+.... .......+.+|-+|++.+.++ +.++|+++-+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d-----~~~~~~~~~-~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRD-----EERVEEFLA-DELDTHVVIGDATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcC-----HHHHHHHhh-hhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence            7899999 6999999999999999999999998     544422110 125789999999999999998 7799999988


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .+... .......-+++..| +++++.
T Consensus        74 t~~d~-~N~i~~~la~~~~g-v~~via   98 (225)
T COG0569          74 TGNDE-VNSVLALLALKEFG-VPRVIA   98 (225)
T ss_pred             eCCCH-HHHHHHHHHHHhcC-CCcEEE
Confidence            77653 22222223334467 888775

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.21  E-value=3.5e-06  Score=72.34  Aligned_cols=70  Identities=21%  Similarity=0.293  Sum_probs=51.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-C-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-G-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|+||||+|+||+.++++|.++ | .+++++.|+     .++...+..      ++..+++.   ++.+++.++|+|+|
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~-----~~rl~~La~------el~~~~i~---~l~~~l~~aDiVv~  221 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQ-----QERLQELQA------ELGGGKIL---SLEEALPEADIVVW  221 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCC-----HHHHHHHHH------HhccccHH---hHHHHHccCCEEEE
Confidence            57999999999999999999865 5 688888887     444433322      11123433   46678889999999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      +++...
T Consensus       222 ~ts~~~  227 (340)
T PRK14982        222 VASMPK  227 (340)
T ss_pred             CCcCCc
Confidence            999755

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.20  E-value=2e-05  Score=63.54  Aligned_cols=81  Identities=15%  Similarity=0.218  Sum_probs=56.3

Q ss_pred             EEEEccCCcchHHHHHHHHhCCC-----CEEEEecCCCCCCCcchhhHhhh-h--cCCcEEEECCCCCHHHHHHHH----
Q 039623            4 TLIIGGTGYIGKKILEASVKAGH-----PTFALVRESTASDPVKGKLIEIF-K--NLGVNVLYGDLQDHESLIKAI----   71 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~~~~~~~-~--~~~v~~v~~D~~d~~~~~~~~----   71 (292)
                      ++|||+++.+|-+++..|++..-     ++.+..|+.++. .+--..+.+. .  ...++++..|+++..++..+.    
T Consensus         6 alITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ka-e~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~   84 (341)
T KOG1478|consen    6 ALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKA-EAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIK   84 (341)
T ss_pred             EEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHH-HHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHH
Confidence            89999999999999999998742     355667773321 1111112222 1  235899999999976665554    


Q ss_pred             ---ccCCEEEEcCcCCC
Q 039623           72 ---KQVDVVISTVSRGQ   85 (292)
Q Consensus        72 ---~~~d~vi~~a~~~~   85 (292)
                         ...|.|+.+||...
T Consensus        85 ~rf~~ld~iylNAg~~~  101 (341)
T KOG1478|consen   85 QRFQRLDYIYLNAGIMP  101 (341)
T ss_pred             HHhhhccEEEEccccCC
Confidence               36899999999876

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.15  E-value=7.3e-06  Score=72.31  Aligned_cols=71  Identities=20%  Similarity=0.316  Sum_probs=56.2

Q ss_pred             ceEEEEcc----------------CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH
Q 039623            2 AATLIIGG----------------TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~   65 (292)
                      ++|+||||                ||.+|.+++++|.++|++|++++++.+..           ...+  +...|+++.+
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~-----------~~~~--~~~~dv~~~~  255 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP-----------TPAG--VKRIDVESAQ  255 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc-----------CCCC--cEEEccCCHH
Confidence            57999999                99999999999999999999999874211           0112  3456889988


Q ss_pred             HHHHHHc----cCCEEEEcCcCCC
Q 039623           66 SLIKAIK----QVDVVISTVSRGQ   85 (292)
Q Consensus        66 ~~~~~~~----~~d~vi~~a~~~~   85 (292)
                      ++.+++.    ++|++||+||...
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEcccccc
Confidence            7777664    6899999999765

>PRK04148 hypothetical protein; Provisional

Probab=98.13  E-value=2.9e-05  Score=57.24  Aligned_cols=93  Identities=18%  Similarity=0.184  Sum_probs=74.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|++.| +| -|.+++..|.+.|++|++++.+     +...   +.....++.++.+|+.+++.  ++-+++|.|+.+=
T Consensus        18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~-----~~aV---~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysir   85 (134)
T PRK04148         18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDIN-----EKAV---EKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIR   85 (134)
T ss_pred             CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeC
Confidence            4699999 78 8999999999999999999998     4443   33445688999999998874  5667899999765


Q ss_pred             cCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      .+.  .....+++.+++.+ +..+|..-
T Consensus        86 pp~--el~~~~~~la~~~~-~~~~i~~l  110 (134)
T PRK04148         86 PPR--DLQPFILELAKKIN-VPLIIKPL  110 (134)
T ss_pred             CCH--HHHHHHHHHHHHcC-CCEEEEcC
Confidence            543  67888999999998 88887633

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=98.13  E-value=3.1e-05  Score=63.84  Aligned_cols=95  Identities=22%  Similarity=0.253  Sum_probs=79.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      |++|+|+|||+ =|+.+++.|.+.|++|++..-.....          ....++.+..+-+.|.+.+.+.+.  ++++||
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI   70 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI   70 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC----------cccCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence            57899999998 89999999999999888776653211          124578888999989999999997  799999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ...-++....++++.++|++.+ ++.+=+
T Consensus        71 DATHPfA~~is~~a~~ac~~~~-ipyiR~   98 (248)
T PRK08057         71 DATHPYAAQISANAAAACRALG-IPYLRL   98 (248)
T ss_pred             ECCCccHHHHHHHHHHHHHHhC-CcEEEE
Confidence            9888888999999999999999 876655

>cd00704 MDH Malate dehydrogenase

Probab=98.11  E-value=1.9e-05  Score=67.85  Aligned_cols=83  Identities=22%  Similarity=0.142  Sum_probs=57.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-C------CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH-----------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-H------PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH-----------   64 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~------~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~-----------   64 (292)
                      ||.|+||+|.+|+.++..|...| .      +++.++++...   ++           .+....|+.|.           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---~~-----------~~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---KA-----------LEGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---Cc-----------cceeeeehhhhcccccCCcEEe
Confidence            79999999999999999998866 2      48888887410   11           11222222222           


Q ss_pred             HHHHHHHccCCEEEEcCcCCC-------------chhHHHHHHHHHHh
Q 039623           65 ESLIKAIKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEA   99 (292)
Q Consensus        65 ~~~~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~   99 (292)
                      ....+.++++|+|||+||...             ....+.+.+.+.++
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~  115 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV  115 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence            234578889999999999866             44566677777776

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.09  E-value=2.1e-05  Score=76.60  Aligned_cols=90  Identities=24%  Similarity=0.175  Sum_probs=65.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CC-------------EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HP-------------TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHES   66 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~   66 (292)
                      |++|+|+|| |++|+..++.|.+.. .+             |++.+++     .++.+.+... .++++.+..|+.|.++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~-----~~~a~~la~~-~~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLY-----LKDAKETVEG-IENAEAVQLDVSDSES  641 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCC-----HHHHHHHHHh-cCCCceEEeecCCHHH
Confidence            578999995 999999999998763 44             6666666     4444333221 2378889999999999


Q ss_pred             HHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           67 LIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        67 ~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +.++++++|+||++.+...   +..++++|.++|
T Consensus       642 L~~~v~~~DaVIsalP~~~---H~~VAkaAieaG  672 (1042)
T PLN02819        642 LLKYVSQVDVVISLLPASC---HAVVAKACIELK  672 (1042)
T ss_pred             HHHhhcCCCEEEECCCchh---hHHHHHHHHHcC
Confidence            9999999999999998643   333444444443

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.08  E-value=4.4e-05  Score=55.97  Aligned_cols=91  Identities=23%  Similarity=0.335  Sum_probs=54.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||.|+||||++|+.|++.|.++. +++..+..++... ..+.   .....  .+..-+..+-.+.+.    +.++|+||.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~-g~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~   72 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSA-GKPL---SEVFPHPKGFEDLSVEDADPEE----LSDVDVVFL   72 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTT-TSBH---HHTTGGGTTTEEEBEEETSGHH----HTTESEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecccc-CCee---ehhccccccccceeEeecchhH----hhcCCEEEe
Confidence            79999999999999999999974 5655554443211 1111   22111  122222221134333    378999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      |.+.   .....+...+.+.| + ++|
T Consensus        73 a~~~---~~~~~~~~~~~~~g-~-~Vi   94 (121)
T PF01118_consen   73 ALPH---GASKELAPKLLKAG-I-KVI   94 (121)
T ss_dssp             -SCH---HHHHHHHHHHHHTT-S-EEE
T ss_pred             cCch---hHHHHHHHHHhhCC-c-EEE
Confidence            9773   45677777777777 5 444

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=98.06  E-value=1.8e-05  Score=68.86  Aligned_cols=94  Identities=20%  Similarity=0.262  Sum_probs=58.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEE-ECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVL-YGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+||+|+||||++|+.+++.|.++ ++++.++.++.+     ..+.+... ..++..+ ..++.+.+..  .+.++|+||
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-----~g~~l~~~-~~~~~~~~~~~~~~~~~~--~~~~vD~Vf   73 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-----AGKPLSDV-HPHLRGLVDLVLEPLDPE--ILAGADVVF   73 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-----cCcchHHh-CcccccccCceeecCCHH--HhcCCCEEE
Confidence            678999999999999999999987 578887776422     11111111 1111111 1223333322  456899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .|.+.   ..+..+..++.++|  .++|-
T Consensus        74 ~alP~---~~~~~~v~~a~~aG--~~VID   97 (343)
T PRK00436         74 LALPH---GVSMDLAPQLLEAG--VKVID   97 (343)
T ss_pred             ECCCc---HHHHHHHHHHHhCC--CEEEE
Confidence            98774   45667777777666  45553

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.06  E-value=3.4e-05  Score=69.96  Aligned_cols=95  Identities=15%  Similarity=0.240  Sum_probs=72.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++     +++.+.+..  ..+++++.+|.++.+.+.++ +.++|.||.+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~-----~~~~~~~~~--~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTD-----EERLRRLQD--RLDVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECC-----HHHHHHHHh--hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            68999996 999999999999999999999998     555543322  25789999999999999888 7899999988


Q ss_pred             CcCCCchhHHHHHHHHHHh-CCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEA-GNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~-~~~~~~i~  107 (292)
                      .....  ....++..+++. + ..++|.
T Consensus        73 ~~~~~--~n~~~~~~~r~~~~-~~~ii~   97 (453)
T PRK09496         73 TDSDE--TNMVACQIAKSLFG-APTTIA   97 (453)
T ss_pred             cCChH--HHHHHHHHHHHhcC-CCeEEE
Confidence            76543  233355556665 5 444443

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=98.04  E-value=3.2e-05  Score=56.89  Aligned_cols=94  Identities=22%  Similarity=0.273  Sum_probs=58.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHh-CCCCEEE-EecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVK-AGHPTFA-LVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |||+|.|++|.+|+.+++.+.+ .++++.+ ++|+++.........+-.....++.+       .+++.++++.+|+||.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-------~~~l~~~~~~~DVvID   73 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-------TDDLEELLEEADVVID   73 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-------BS-HHHHTTH-SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc-------chhHHHhcccCCEEEE
Confidence            6899999999999999999999 5788654 45654222111111111111112222       2457778888999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +..   .......++.|.+++ ++.++
T Consensus        74 fT~---p~~~~~~~~~~~~~g-~~~Vi   96 (124)
T PF01113_consen   74 FTN---PDAVYDNLEYALKHG-VPLVI   96 (124)
T ss_dssp             ES----HHHHHHHHHHHHHHT--EEEE
T ss_pred             cCC---hHHhHHHHHHHHhCC-CCEEE
Confidence            873   467788889999988 55554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.02  E-value=2.5e-05  Score=66.33  Aligned_cols=80  Identities=19%  Similarity=0.157  Sum_probs=58.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHh-hhhc--CCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIE-IFKN--LGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~-~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ++++|+|| |.+|++++..|.+.|++ |+++.|+...  .++.+.+. .+..  ..+.....|+.+.+++.+.++.+|+|
T Consensus       127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~--~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDF--YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchH--HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            46999997 78999999999999986 9999998310  03333322 2211  23456678988888888888889999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      ||+....
T Consensus       204 INaTp~G  210 (289)
T PRK12548        204 VNATLVG  210 (289)
T ss_pred             EEeCCCC
Confidence            9987643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=98.01  E-value=8.7e-05  Score=53.87  Aligned_cols=92  Identities=32%  Similarity=0.473  Sum_probs=69.1

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEcCc
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVISTVS   82 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~a~   82 (292)
                      |+|.| .|.+|+.+++.|.+.+.+|.+++++     +++.   +.+...++.++.+|.+|++.+.++ +.+++.++-+..
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d-----~~~~---~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRD-----PERV---EELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESS-----HHHH---HHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECC-----cHHH---HHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            68899 5899999999999977799999998     5554   444567799999999999999876 458999997776


Q ss_pred             CCCchhHHHHHHHHHHhCCcceee
Q 039623           83 RGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        83 ~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      ..  .....++..+++.+...+++
T Consensus        72 ~d--~~n~~~~~~~r~~~~~~~ii   93 (116)
T PF02254_consen   72 DD--EENLLIALLARELNPDIRII   93 (116)
T ss_dssp             SH--HHHHHHHHHHHHHTTTSEEE
T ss_pred             CH--HHHHHHHHHHHHHCCCCeEE
Confidence            43  55566666777755234444

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.97  E-value=9.6e-06  Score=71.17  Aligned_cols=92  Identities=14%  Similarity=0.244  Sum_probs=58.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHH-HHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIK-AIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~~~~d~vi   78 (292)
                      ||||+|.||||++|..|++.|.++ +++++.+.++.+.-  .+.   .   ........+|..+.+++.. .++++|+||
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG--~~i---~---~~~~~l~~~~~~~~~~~~~~~~~~~DvVf  109 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG--QSF---G---SVFPHLITQDLPNLVAVKDADFSDVDAVF  109 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC--CCc---h---hhCccccCccccceecCCHHHhcCCCEEE
Confidence            368999999999999999999998 58999998863321  111   1   1111222234433222222 257899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .+.+.   .....++.++ +.+  .++|
T Consensus       110 ~Alp~---~~s~~i~~~~-~~g--~~VI  131 (381)
T PLN02968        110 CCLPH---GTTQEIIKAL-PKD--LKIV  131 (381)
T ss_pred             EcCCH---HHHHHHHHHH-hCC--CEEE
Confidence            98875   3667777776 345  4455

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.94  E-value=3.6e-05  Score=66.41  Aligned_cols=89  Identities=15%  Similarity=0.227  Sum_probs=53.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEE--EecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFA--LVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |++|+|+||||++|+.|++.|.+++|.+.-  ..++.... ..+.   .   ..+.   ..++.+.+.. + ++++|++|
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~a-G~~l---~---~~~~---~l~~~~~~~~-~-~~~vD~vF   71 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESA-GHSV---P---FAGK---NLRVREVDSF-D-FSQVQLAF   71 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccC-CCee---c---cCCc---ceEEeeCChH-H-hcCCCEEE
Confidence            467999999999999999999987765443  22221111 1111   1   1121   2233222222 1 47899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .+.+.   .....+++.+.++| ++ +|
T Consensus        72 la~p~---~~s~~~v~~~~~~G-~~-VI   94 (336)
T PRK05671         72 FAAGA---AVSRSFAEKARAAG-CS-VI   94 (336)
T ss_pred             EcCCH---HHHHHHHHHHHHCC-Ce-EE
Confidence            98873   34566888887877 54 44

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.90  E-value=2.4e-05  Score=63.85  Aligned_cols=62  Identities=19%  Similarity=0.272  Sum_probs=44.9

Q ss_pred             CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH-------ccCCEEEEcCc
Q 039623           10 TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI-------KQVDVVISTVS   82 (292)
Q Consensus        10 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-------~~~d~vi~~a~   82 (292)
                      ||.||+++++.|.++|++|++++|....         .   ..  ....+|+.+.++..+++       .++|++||+||
T Consensus        24 SGgIG~AIA~~la~~Ga~Vvlv~~~~~l---------~---~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        24 TGHLGKIITETFLSAGHEVTLVTTKRAL---------K---PE--PHPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEcChhhc---------c---cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            7999999999999999999998764211         0   00  01346888776666554       35899999999


Q ss_pred             CCC
Q 039623           83 RGQ   85 (292)
Q Consensus        83 ~~~   85 (292)
                      ...
T Consensus        90 v~d   92 (227)
T TIGR02114        90 VSD   92 (227)
T ss_pred             ecc
Confidence            654

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.87  E-value=6e-05  Score=68.31  Aligned_cols=90  Identities=14%  Similarity=0.263  Sum_probs=65.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+|+++ +|..+++.|++.|++|++.+++...   .-.+.++.+...+++++.+|..+     ....++|+||+++
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~---~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~   76 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED---QLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP   76 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence            5799999766 9999999999999999999887321   11222244445578898998876     3456799999999


Q ss_pred             cCCCchhHHHHHHHHHHhCCcce
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVKR  104 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~~  104 (292)
                      |...   ....+.+|++.| ++.
T Consensus        77 g~~~---~~~~~~~a~~~~-i~~   95 (450)
T PRK14106         77 GVPL---DSPPVVQAHKKG-IEV   95 (450)
T ss_pred             CCCC---CCHHHHHHHHCC-CcE
Confidence            8643   334677777766 443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.86  E-value=3.5e-05  Score=61.18  Aligned_cols=189  Identities=8%  Similarity=0.035  Sum_probs=95.2

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cCCE
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QVDV   76 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~d~   76 (292)
                      |||||++..||..+++.+.+.+.+.....++......+..   .-..........+|++....+.++++       +-|.
T Consensus         9 illTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L---~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~i   85 (253)
T KOG1204|consen    9 ILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGL---KVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDI   85 (253)
T ss_pred             EEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccce---EEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeE
Confidence            8999999999999999999988654444333222101000   00001112233344444433333332       4699


Q ss_pred             EEEcCcCCC--------------------------chhHHHHHHHHHHhCCc-ceeec-cCCCCCCccCCccCCCCcchH
Q 039623           77 VISTVSRGQ--------------------------IPEQAKIIAAVKEAGNV-KRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        77 vi~~a~~~~--------------------------~~~~~~l~~a~~~~~~~-~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      |||+||...                          +....-++...++.. + +.++. |+....     .|......|.
T Consensus        86 iI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p-~~~~vVnvSS~aav-----~p~~~wa~yc  159 (253)
T KOG1204|consen   86 IIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP-VNGNVVNVSSLAAV-----RPFSSWAAYC  159 (253)
T ss_pred             EEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC-ccCeEEEecchhhh-----ccccHHHHhh
Confidence            999999865                          111122222222221 2 22333 332111     1112244566


Q ss_pred             HHHHHHHHHHHH-----c-CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          129 ADKIKIRRAIEA-----E-GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       129 ~~K~~~e~~~~~-----~-~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      .+|++.+.+++.     + ++.+..++||++-..-......-.  .........+......-...+..+.|+.+..++++
T Consensus       160 ~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~--~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~  237 (253)
T KOG1204|consen  160 SSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETS--RMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEK  237 (253)
T ss_pred             hhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhcc--CCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHh
Confidence            699999888863     2 677777789988643211110000  00011111122222333556777888888888876


Q ss_pred             C
Q 039623          203 P  203 (292)
Q Consensus       203 ~  203 (292)
                      .
T Consensus       238 ~  238 (253)
T KOG1204|consen  238 G  238 (253)
T ss_pred             c
Confidence            5

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=97.84  E-value=0.00016  Score=59.63  Aligned_cols=97  Identities=27%  Similarity=0.323  Sum_probs=76.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||+|||+ =|+.+++.|.+.|+ |.+.+-.+...     +. .........+..+-+.|.+.+.+.++  +++.||.
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~-----~~-~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID   72 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG-----EL-LKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVID   72 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH-----hh-hccccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            7999999998 79999999999998 66554442211     00 11112467899999989999999996  7999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ..-++....++++.++|++.+ ++.+-+
T Consensus        73 ATHPfA~~is~na~~a~~~~~-ipylR~   99 (249)
T PF02571_consen   73 ATHPFAAEISQNAIEACRELG-IPYLRF   99 (249)
T ss_pred             CCCchHHHHHHHHHHHHhhcC-cceEEE
Confidence            888877899999999999999 887665

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.83  E-value=4.6e-05  Score=56.98  Aligned_cols=74  Identities=19%  Similarity=0.300  Sum_probs=55.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++++|.|| |..|+.++..|.+.|.+ |+++.|+     .+|.+.+.... ..+++.+..+     ++.+.+.++|+||+
T Consensus        13 ~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt-----~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~~~~DivI~   81 (135)
T PF01488_consen   13 KRVLVIGA-GGAARAVAAALAALGAKEITIVNRT-----PERAEALAEEFGGVNIEAIPLE-----DLEEALQEADIVIN   81 (135)
T ss_dssp             SEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESS-----HHHHHHHHHHHTGCSEEEEEGG-----GHCHHHHTESEEEE
T ss_pred             CEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECC-----HHHHHHHHHHcCccccceeeHH-----HHHHHHhhCCeEEE
Confidence            58999995 88999999999999976 9999998     77776655443 3345555443     34477889999999


Q ss_pred             cCcCCCc
Q 039623           80 TVSRGQI   86 (292)
Q Consensus        80 ~a~~~~~   86 (292)
                      +.+....
T Consensus        82 aT~~~~~   88 (135)
T PF01488_consen   82 ATPSGMP   88 (135)
T ss_dssp             -SSTTST
T ss_pred             ecCCCCc
Confidence            9887653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.81  E-value=0.0001  Score=63.89  Aligned_cols=86  Identities=15%  Similarity=0.270  Sum_probs=57.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEE---EEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTF---ALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      +|+|.||||++|+.|++.|.+++|.+.   .+.+..+.-  .+.      ...+.+.+..|+. .    ..++++|+||.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g--~~~------~~~~~~~~~~~~~-~----~~~~~~D~v~~   67 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG--RKV------TFKGKELEVNEAK-I----ESFEGIDIALF   67 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC--Cee------eeCCeeEEEEeCC-h----HHhcCCCEEEE
Confidence            689999999999999999999888754   344553221  111      1224556666663 2    23478999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      ++|..   .+..++....+.| + ++|
T Consensus        68 a~g~~---~s~~~a~~~~~~G-~-~VI   89 (339)
T TIGR01296        68 SAGGS---VSKEFAPKAAKCG-A-IVI   89 (339)
T ss_pred             CCCHH---HHHHHHHHHHHCC-C-EEE
Confidence            99854   4555666666667 5 355

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.76  E-value=0.00019  Score=55.51  Aligned_cols=93  Identities=16%  Similarity=0.191  Sum_probs=56.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh----------cCCcEEEECCCCCHHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK----------NLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~v~~v~~D~~d~~~~~~~   70 (292)
                      ||+|.+.| .|-+|+.+++.|.++||+|++.+|+     +++.+.+....          -.+.+++..-+.|.+.+.++
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~-----~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v   74 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRS-----PEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAV   74 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESS-----HHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccc-----hhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhh
Confidence            89999999 7999999999999999999999998     66654433210          01234455555555555554


Q ss_pred             Hcc---------CCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           71 IKQ---------VDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~~~---------~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +.+         -.++|++.... ....+.+.+.+.++|
T Consensus        75 ~~~~~i~~~l~~g~iiid~sT~~-p~~~~~~~~~~~~~g  112 (163)
T PF03446_consen   75 LFGENILAGLRPGKIIIDMSTIS-PETSRELAERLAAKG  112 (163)
T ss_dssp             HHCTTHGGGS-TTEEEEE-SS---HHHHHHHHHHHHHTT
T ss_pred             hhhhHHhhccccceEEEecCCcc-hhhhhhhhhhhhhcc
Confidence            432         23444443333 456667777776666

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.76  E-value=0.00018  Score=60.02  Aligned_cols=69  Identities=19%  Similarity=0.168  Sum_probs=43.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|+|+|++|.+|+.+++.+.+. +.++.++....    +++....          -..++...+++.++++++|+||.
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~----~~~~~~~----------~~~~i~~~~dl~~ll~~~DvVid   66 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRP----GSPLVGQ----------GALGVAITDDLEAVLADADVLID   66 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC----Ccccccc----------CCCCccccCCHHHhccCCCEEEE
Confidence            789999999999999999988875 68877654332    2111110          01122223345555667888887


Q ss_pred             cCcC
Q 039623           80 TVSR   83 (292)
Q Consensus        80 ~a~~   83 (292)
                      +..+
T Consensus        67 ~t~p   70 (257)
T PRK00048         67 FTTP   70 (257)
T ss_pred             CCCH
Confidence            7753

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.76  E-value=0.00012  Score=57.66  Aligned_cols=73  Identities=19%  Similarity=0.327  Sum_probs=46.8

Q ss_pred             ceEEEEcc----------------CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC--
Q 039623            2 AATLIIGG----------------TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD--   63 (292)
Q Consensus         2 ~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d--   63 (292)
                      ++||||+|                ||.+|.+|++.+..+|++|+.+....+..           .+.+++.+...-.+  
T Consensus         4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~i~v~sa~em   72 (185)
T PF04127_consen    4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP-----------PPPGVKVIRVESAEEM   72 (185)
T ss_dssp             -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-SSHHHH
T ss_pred             CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc-----------ccccceEEEecchhhh
Confidence            57888865                59999999999999999999998873211           14477777765322  


Q ss_pred             HHHHHHHHccCCEEEEcCcCCC
Q 039623           64 HESLIKAIKQVDVVISTVSRGQ   85 (292)
Q Consensus        64 ~~~~~~~~~~~d~vi~~a~~~~   85 (292)
                      .+.+.+.+.+.|++|++|+...
T Consensus        73 ~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   73 LEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HHHHHHHGGGGSEEEE-SB--S
T ss_pred             hhhhccccCcceeEEEecchhh
Confidence            1334444557899999999887

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.73  E-value=0.00021  Score=61.52  Aligned_cols=83  Identities=17%  Similarity=0.115  Sum_probs=57.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-C------CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH----------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-H------PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE----------   65 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~------~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~----------   65 (292)
                      +|+|+||+|.+|+.++..|...+ .      ++..++++...   ++           .+.+..|+.|..          
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~---~~-----------a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM---KV-----------LEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc---cc-----------cceeEeehhcccchhcCceecc
Confidence            68999999999999999998865 2      58899886331   11           122233333322          


Q ss_pred             -HHHHHHccCCEEEEcCcCCC-------------chhHHHHHHHHHHh
Q 039623           66 -SLIKAIKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEA   99 (292)
Q Consensus        66 -~~~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~   99 (292)
                       ...+.++++|+||++||...             +...+.+.+.+.++
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~  114 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL  114 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence             23467889999999999865             44566667777766

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.73  E-value=0.00028  Score=53.17  Aligned_cols=87  Identities=20%  Similarity=0.242  Sum_probs=58.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchh----hHhhhh-cC--CcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGK----LIEIFK-NL--GVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~----~~~~~~-~~--~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |||.|+||+|.+|++++-.|...+  .++..++++     .++.+    .+++.. ..  +..+..+   +.    +.++
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~-----~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~~----~~~~   68 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDIN-----EDKAEGEALDLSHASAPLPSPVRITSG---DY----EALK   68 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHHHHHGSTEEEEEEES---SG----GGGT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccC-----cccceeeehhhhhhhhhcccccccccc---cc----cccc
Confidence            799999999999999999999987  479999998     33321    112221 11  2233332   22    3467


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+|+.++|...             ....+.+.+.+.+.+
T Consensus        69 ~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~  109 (141)
T PF00056_consen   69 DADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA  109 (141)
T ss_dssp             TESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC
Confidence            8999999999865             445556666666665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.71  E-value=0.0002  Score=62.48  Aligned_cols=95  Identities=18%  Similarity=0.255  Sum_probs=57.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhh------hc--CCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIF------KN--LGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~------~~--~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||+|+||||++|+.|++.|.++. .++.++.++.+.. ......+-..      ..  ..+.+.   ..+++.    +.
T Consensus         4 ~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~-G~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~----~~   75 (349)
T PRK08664          4 LKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSA-GKTYGEAVRWQLDGPIPEEVADMEVV---STDPEA----VD   75 (349)
T ss_pred             cEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhc-CCcccccccccccccccccccceEEE---eCCHHH----hc
Confidence            589999999999999999999876 4888885553221 1111100000      00  011111   113443    35


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      ++|+|+.+.+..   ....+.+.+.+.| ++.+..|
T Consensus        76 ~~DvVf~a~p~~---~s~~~~~~~~~~G-~~vIDls  107 (349)
T PRK08664         76 DVDIVFSALPSD---VAGEVEEEFAKAG-KPVFSNA  107 (349)
T ss_pred             CCCEEEEeCChh---HHHHHHHHHHHCC-CEEEECC
Confidence            899998876643   3455667777788 7766653

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.70  E-value=0.00016  Score=57.13  Aligned_cols=72  Identities=26%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+++|.| +|.||..|+..|.+.||+|..-+|+.    +++.+.......+.  +      ..-+..++.+.+|+||..
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~----~~~~~a~a~~l~~~--i------~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRG----PKALAAAAAALGPL--I------TGGSNEDAAALADVVVLA   67 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCC----hhHHHHHHHhhccc--c------ccCChHHHHhcCCEEEEe
Confidence            78888888 89999999999999999999887764    33333333322222  1      122244567789999998


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .+...
T Consensus        68 VP~~a   72 (211)
T COG2085          68 VPFEA   72 (211)
T ss_pred             ccHHH
Confidence            87654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.69  E-value=0.00043  Score=62.79  Aligned_cols=97  Identities=24%  Similarity=0.310  Sum_probs=71.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~   79 (292)
                      +++|+|.|+ |.+|+.+++.|.+.|++|++++++     +++.+.+... ..++.++.+|.++.+.+.++ ++++|.||-
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~-----~~~~~~~~~~-~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERD-----PERAEELAEE-LPNTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHH-CCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            468999995 999999999999999999999998     5555433321 24788999999999988654 458999987


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +.....  ....+...|++.+ ..+++.
T Consensus       304 ~~~~~~--~n~~~~~~~~~~~-~~~ii~  328 (453)
T PRK09496        304 LTNDDE--ANILSSLLAKRLG-AKKVIA  328 (453)
T ss_pred             CCCCcH--HHHHHHHHHHHhC-CCeEEE
Confidence            666442  2223444566666 666664

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.63  E-value=0.00033  Score=60.05  Aligned_cols=93  Identities=17%  Similarity=0.203  Sum_probs=56.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCC--CCCCcchhhHhhhhcCC--cEEEECCCCCHHHHHHHHccCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVREST--ASDPVKGKLIEIFKNLG--VNVLYGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~--~~~~~~~~~~~~~~~~~--v~~v~~D~~d~~~~~~~~~~~d   75 (292)
                      |||.|+||||++|..++..|...|+  +|++++|+..  .......+..+.+...+  ..+...  .|   + +.++++|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d---~-~~l~~aD   74 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SD---L-SDVAGSD   74 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CC---H-HHhCCCC
Confidence            7899999999999999999999985  4999999531  11111111111111111  111111  12   2 3488999


Q ss_pred             EEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           76 VVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        76 ~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +||.++|...             ....+.+++.+.+.+
T Consensus        75 iViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~  112 (309)
T cd05294          75 IVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA  112 (309)
T ss_pred             EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999654             244555555555554

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.61  E-value=0.00024  Score=61.84  Aligned_cols=93  Identities=18%  Similarity=0.220  Sum_probs=55.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEE-ECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFAL-VRESTASDPVKGKLIEIFKNLGVNVL-YGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|+|+||||++|..+++.|.++ ++++..+ +++++.  ..+.   ... ...+... ..++.+. +..++.+++|+||
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sa--gk~~---~~~-~~~l~~~~~~~~~~~-~~~~~~~~~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESA--GKPV---SEV-HPHLRGLVDLNLEPI-DEEEIAEDADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhc--CCCh---HHh-CccccccCCceeecC-CHHHhhcCCCEEE
Confidence            58999999999999999999987 5788855 443211  1111   110 1111111 1112111 1223445899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .|.+..   .+..++..+.++|  .++|
T Consensus        74 ~alP~~---~s~~~~~~~~~~G--~~VI   96 (346)
T TIGR01850        74 LALPHG---VSAELAPELLAAG--VKVI   96 (346)
T ss_pred             ECCCch---HHHHHHHHHHhCC--CEEE
Confidence            988743   5677777777777  4555

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.61  E-value=0.0002  Score=63.06  Aligned_cols=71  Identities=24%  Similarity=0.306  Sum_probs=53.8

Q ss_pred             ceEEEEcc----------------CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH
Q 039623            2 AATLIIGG----------------TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~   65 (292)
                      ++|+||||                ||.+|..+++.|..+|++|+++.+.....           ...++  ...|+++.+
T Consensus       186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~~--~~~~v~~~~  252 (390)
T TIGR00521       186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPGV--KSIKVSTAE  252 (390)
T ss_pred             ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCCc--EEEEeccHH
Confidence            57999998                47899999999999999999998764211           02222  457888887


Q ss_pred             HH-HHHH----ccCCEEEEcCcCCC
Q 039623           66 SL-IKAI----KQVDVVISTVSRGQ   85 (292)
Q Consensus        66 ~~-~~~~----~~~d~vi~~a~~~~   85 (292)
                      ++ ..++    .++|++|++||...
T Consensus       253 ~~~~~~~~~~~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       253 EMLEAALNELAKDFDIFISAAAVAD  277 (390)
T ss_pred             HHHHHHHHhhcccCCEEEEcccccc
Confidence            77 4444    36899999999876

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.56  E-value=0.00013  Score=59.31  Aligned_cols=73  Identities=29%  Similarity=0.274  Sum_probs=50.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-----hcCCc--EEEECCCCCHHHHHHHHccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-----KNLGV--NVLYGDLQDHESLIKAIKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~v--~~v~~D~~d~~~~~~~~~~~   74 (292)
                      |||.|+||+|.+|+.+++.|.+.|++|.+.+|+     +++.+.+...     ...++  .....   +   ..++++.+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~-----~~~~~~l~~~~~~~~~~~g~~~~~~~~---~---~~ea~~~a   69 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRD-----LEKAEEAAAKALEELGHGGSDIKVTGA---D---NAEAAKRA   69 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcC-----HHHHHHHHHHHHhhccccCCCceEEEe---C---hHHHHhcC
Confidence            689999999999999999999999999999998     5554333221     01111  11111   2   23556789


Q ss_pred             CEEEEcCcCCC
Q 039623           75 DVVISTVSRGQ   85 (292)
Q Consensus        75 d~vi~~a~~~~   85 (292)
                      |+||.++....
T Consensus        70 DvVilavp~~~   80 (219)
T TIGR01915        70 DVVILAVPWDH   80 (219)
T ss_pred             CEEEEECCHHH
Confidence            99998887543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.54  E-value=0.00022  Score=61.29  Aligned_cols=91  Identities=19%  Similarity=0.314  Sum_probs=56.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh--------hhhcCCc------EEEECCCCCHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE--------IFKNLGV------NVLYGDLQDHES   66 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~v------~~v~~D~~d~~~   66 (292)
                      ||+|.|+| +|.+|+.++..|+++|++|++++|+     +++.+...        .+...+.      ......+.-..+
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~-----~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~   75 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDAD-----PAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDS   75 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCC-----HHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECc
Confidence            67899999 8999999999999999999999998     43332211        1111121      000001111123


Q ss_pred             HHHHHccCCEEEEcCcCCCchhHHHHHHHHHH
Q 039623           67 LIKAIKQVDVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        67 ~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      +.++++++|+|+.+.... ....+.+++.+.+
T Consensus        76 ~~~a~~~ad~Vi~avpe~-~~~k~~~~~~l~~  106 (308)
T PRK06129         76 LADAVADADYVQESAPEN-LELKRALFAELDA  106 (308)
T ss_pred             HHHhhCCCCEEEECCcCC-HHHHHHHHHHHHH
Confidence            556778999999988654 2344445554444

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.54  E-value=0.0013  Score=61.63  Aligned_cols=94  Identities=21%  Similarity=0.292  Sum_probs=73.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|.| .|-+|+.+++.|.++|+++++++.+     +++.+.   +...+..++.||.+|++.+.++ ++++|.++-+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v~~---~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERD-----ISAVNL---MRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECC-----HHHHHH---HHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence            3688899 7999999999999999999999998     666543   3456899999999999988776 5689999977


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceee
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      ....  .....++..+++..+..+++
T Consensus       472 ~~d~--~~n~~i~~~~r~~~p~~~Ii  495 (601)
T PRK03659        472 CNEP--EDTMKIVELCQQHFPHLHIL  495 (601)
T ss_pred             eCCH--HHHHHHHHHHHHHCCCCeEE
Confidence            7654  55666777787775233444

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.52  E-value=0.00083  Score=58.32  Aligned_cols=83  Identities=18%  Similarity=0.238  Sum_probs=51.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC---EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP---TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++|+|.||||++|+.|++.|.+++|.   +..+...++   ..+.-.     ..+.+....++. +    +.+.++|+||
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rs---aGk~~~-----~~~~~~~v~~~~-~----~~~~~~D~vf   74 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARS---AGKKVT-----FEGRDYTVEELT-E----DSFDGVDIAL   74 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCC---CCCeee-----ecCceeEEEeCC-H----HHHcCCCEEE
Confidence            58999999999999999999998774   333333221   112110     122333333442 2    2346899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+++..   ....+...+.+.|
T Consensus        75 ~a~p~~---~s~~~~~~~~~~g   93 (344)
T PLN02383         75 FSAGGS---ISKKFGPIAVDKG   93 (344)
T ss_pred             ECCCcH---HHHHHHHHHHhCC
Confidence            988754   4555666665566

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.52  E-value=0.00078  Score=62.76  Aligned_cols=93  Identities=19%  Similarity=0.350  Sum_probs=68.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEcC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVISTV   81 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~a   81 (292)
                      +|+|.| .|.+|+++++.|.++|++|.+++.+     +++.+.   +...+...+.+|.+|++.++++ ++++|.++-+.
T Consensus       419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d-----~~~~~~---~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETS-----RTRVDE---LRERGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CEEEEC-CChHHHHHHHHHHHCCCCEEEEECC-----HHHHHH---HHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            588999 7999999999999999999999998     666543   3456899999999999988765 45899888766


Q ss_pred             cCCCchhHHHHHHHHHHhCCcceee
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +...  ...++...+++.....+++
T Consensus       490 ~~~~--~~~~iv~~~~~~~~~~~ii  512 (558)
T PRK10669        490 PNGY--EAGEIVASAREKRPDIEII  512 (558)
T ss_pred             CChH--HHHHHHHHHHHHCCCCeEE
Confidence            6442  2334555555543233444

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.49  E-value=0.00065  Score=59.08  Aligned_cols=90  Identities=14%  Similarity=0.251  Sum_probs=56.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCC---EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHP---TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |++|.|.||||++|+.+++.|+++ .+.   +..++.+.+   ..+.   ..+.+.  .....++.|++.    +.++|+
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~s---g~~~---~~f~g~--~~~v~~~~~~~~----~~~~Di   68 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQA---GGAA---PSFGGK--EGTLQDAFDIDA----LKKLDI   68 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhh---CCcc---cccCCC--cceEEecCChhH----hcCCCE
Confidence            889999999999999999966665 566   555544321   1111   112122  222334444443    467999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +|.+++.   ..+..+...+.++| .+-+|
T Consensus        69 vf~a~~~---~~s~~~~~~~~~aG-~~~~V   94 (369)
T PRK06598         69 IITCQGG---DYTNEVYPKLRAAG-WQGYW   94 (369)
T ss_pred             EEECCCH---HHHHHHHHHHHhCC-CCeEE
Confidence            9998874   35677777777777 55333

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=97.48  E-value=0.00041  Score=59.46  Aligned_cols=98  Identities=16%  Similarity=0.269  Sum_probs=75.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH-HHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE-SLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~-~~~~~~~~~d~vi   78 (292)
                      |++||++| +||+.+.++..|.+++ .+|++-+|.     ..+.+.  .....+++-|..|+.+++ .+.+.++..|.++
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~-----~~~~~~--~~~~~~~~av~ldv~~~~~~L~~~v~~~D~vi   73 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRT-----LKDAEA--LVKGINIKAVSLDVADEELALRKEVKPLDLVI   73 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCceEEEehhh-----HHHHHH--HhcCCCccceEEEccchHHHHHhhhcccceee
Confidence            46799999 7999999999999886 688888876     333322  223567999999999988 8888999999999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeeccCCC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFG  111 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g  111 (292)
                      .+.+.   .....+++.|..+.  ++.+.|+|-
T Consensus        74 SLlP~---t~h~lVaK~~i~~~--~~~vtsSyv  101 (445)
T KOG0172|consen   74 SLLPY---TFHPLVAKGCIITK--EDSVTSSYV  101 (445)
T ss_pred             eeccc---hhhHHHHHHHHHhh--ccccccccc
Confidence            98874   45667777777664  666655553

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.48  E-value=0.00027  Score=62.30  Aligned_cols=34  Identities=21%  Similarity=0.426  Sum_probs=31.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |++|.|.||.|.+|..+++.|.++|++|++.+|+
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            3689999999999999999999999999999986

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.43  E-value=0.00049  Score=58.17  Aligned_cols=72  Identities=18%  Similarity=0.230  Sum_probs=49.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++++|+|+ |.+|+.++..|.+.| .+|+++.|+     .++.+.+......... +..+.    ...+.+.++|+||++
T Consensus       124 k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~-----~~~a~~l~~~~~~~~~-~~~~~----~~~~~~~~~DivIna  192 (278)
T PRK00258        124 KRILILGA-GGAARAVILPLLDLGVAEITIVNRT-----VERAEELAKLFGALGK-AELDL----ELQEELADFDLIINA  192 (278)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhhhccc-eeecc----cchhccccCCEEEEC
Confidence            57999995 999999999999999 799999998     6665444332211100 11111    123456789999999


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      .+..
T Consensus       193 Tp~g  196 (278)
T PRK00258        193 TSAG  196 (278)
T ss_pred             CcCC
Confidence            7654

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.43  E-value=0.0012  Score=53.96  Aligned_cols=36  Identities=22%  Similarity=0.405  Sum_probs=30.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CC-EEEEecCCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HP-TFALVREST   36 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~-V~~~~r~~~   36 (292)
                      ||||+|.|++|.+|+.+++.+.+.. .+ +-++.|.++
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            6899999999999999999999886 55 446677654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.38  E-value=0.00049  Score=52.63  Aligned_cols=73  Identities=21%  Similarity=0.195  Sum_probs=49.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|+.+++.|.+.| ++|++.+|+     +++.+.+....  +...+..+..+.   .++++++|+||++
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~-----~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~Dvvi~~   88 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRT-----LEKAKALAERF--GELGIAIAYLDL---EELLAEADLIINT   88 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHH--hhcccceeecch---hhccccCCEEEeC
Confidence            57999996 999999999999996 789999998     55443332211  111112233333   3447889999999


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .+...
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            88754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.37  E-value=0.0017  Score=45.32  Aligned_cols=69  Identities=29%  Similarity=0.381  Sum_probs=48.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC---CCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG---HPTFAL-VRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ||.|+| +|.+|..+++.|.+.|   ++|... .|+     +++.+.+...  .++.....|      ..++++.+|+||
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~-----~~~~~~~~~~--~~~~~~~~~------~~~~~~~advvi   66 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRS-----PEKAAELAKE--YGVQATADD------NEEAAQEADVVI   66 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESS-----HHHHHHHHHH--CTTEEESEE------HHHHHHHTSEEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCc-----HHHHHHHHHh--hccccccCC------hHHhhccCCEEE
Confidence            688897 8999999999999999   899955 888     7777555432  233333322      345666889999


Q ss_pred             EcCcCCC
Q 039623           79 STVSRGQ   85 (292)
Q Consensus        79 ~~a~~~~   85 (292)
                      .+..+..
T Consensus        67 lav~p~~   73 (96)
T PF03807_consen   67 LAVKPQQ   73 (96)
T ss_dssp             E-S-GGG
T ss_pred             EEECHHH
Confidence            9988665

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=97.37  E-value=0.0019  Score=59.14  Aligned_cols=98  Identities=20%  Similarity=0.246  Sum_probs=74.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      .||+|+| +|.+|++++..|...| .++++++-+...++..+...+.+.   .++++.+...+..+.+++.+.++++|+|
T Consensus       130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~DiV  208 (637)
T TIGR03693       130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPADWV  208 (637)
T ss_pred             ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCCcEE
Confidence            3799999 7889999999999999 578788655433222222122111   3567877777878888999999999999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ++.+-.........+-++|.+.+
T Consensus       209 i~vsDdy~~~~Lr~lN~acvkeg  231 (637)
T TIGR03693       209 LYVSDNGDIDDLHALHAFCKEEG  231 (637)
T ss_pred             EEECCCCChHHHHHHHHHHHHcC
Confidence            99988777778888999999887

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=97.36  E-value=0.00097  Score=60.33  Aligned_cols=40  Identities=18%  Similarity=0.175  Sum_probs=35.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI   46 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~   46 (292)
                      |++|.|+| .|.+|+++++.|.++||+|.+.+|+     +++.+.+
T Consensus         1 ~~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~-----~~~~~~l   40 (470)
T PTZ00142          1 MSDIGLIG-LAVMGQNLALNIASRGFKISVYNRT-----YEKTEEF   40 (470)
T ss_pred             CCEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHH
Confidence            78999999 7999999999999999999999998     5554443

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.35  E-value=0.0014  Score=56.90  Aligned_cols=101  Identities=20%  Similarity=0.223  Sum_probs=67.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC-C---------------Ccchh----hHhhh-hcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS-D---------------PVKGK----LIEIF-KNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-~---------------~~~~~----~~~~~-~~~~v~~v~~   59 (292)
                      ++|+|.| .|.+|+++++.|...|. ++++++++.-.. +               ..|.+    .+..+ ..-.++.+..
T Consensus        25 ~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~  103 (338)
T PRK12475         25 KHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT  103 (338)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence            4799999 57799999999999997 788888863110 0               01221    12222 1233566667


Q ss_pred             CCCCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           60 DLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        60 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      |++ .+.+.++++++|+||.+....  ..-..+-++|.+.+ ++.+.-
T Consensus       104 ~~~-~~~~~~~~~~~DlVid~~D~~--~~r~~in~~~~~~~-ip~i~~  147 (338)
T PRK12475        104 DVT-VEELEELVKEVDLIIDATDNF--DTRLLINDLSQKYN-IPWIYG  147 (338)
T ss_pred             cCC-HHHHHHHhcCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEEE
Confidence            775 456778899999999987543  44455667888887 766543

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=97.33  E-value=0.0022  Score=52.09  Aligned_cols=96  Identities=18%  Similarity=0.176  Sum_probs=72.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      ||+|+|+|||+ =++.|++.|...+..+++.+-.....   +      +..+....+.+-..+.+.+.+.++  ++|.+|
T Consensus         2 ~~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~---~------l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llI   71 (257)
T COG2099           2 MMRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGA---K------LAEQIGPVRVGGFLGAEGLAAFLREEGIDLLI   71 (257)
T ss_pred             CceEEEEeccH-HHHHHHHHhhccCccEEEEEcccccc---c------chhccCCeeecCcCCHHHHHHHHHHcCCCEEE
Confidence            68999999998 68999999999986555554432211   0      111122256666678899999987  799999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ...-+.....++|.+++|++.| ++.+-+
T Consensus        72 DATHPyAa~iS~Na~~aake~g-ipy~r~   99 (257)
T COG2099          72 DATHPYAARISQNAARAAKETG-IPYLRL   99 (257)
T ss_pred             ECCChHHHHHHHHHHHHHHHhC-CcEEEE
Confidence            9777777899999999999999 888776

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.31  E-value=0.0043  Score=49.58  Aligned_cols=106  Identities=18%  Similarity=0.271  Sum_probs=67.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCC-C---------------Ccchh----hHhhhhcCC--cEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTAS-D---------------PVKGK----LIEIFKNLG--VNVLY   58 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-~---------------~~~~~----~~~~~~~~~--v~~v~   58 (292)
                      .+|+|.|+.| +|+++++.|...| .+++.++.+.-.. +               ..|.+    .++.+ ++.  ++.+.
T Consensus        20 s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~~~~   97 (198)
T cd01485          20 AKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLSIVE   97 (198)
T ss_pred             CcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEEEEe
Confidence            4799999655 9999999999999 4688887652211 0               00111    12222 333  45555


Q ss_pred             CCCCC-HHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccCCCC
Q 039623           59 GDLQD-HESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGN  112 (292)
Q Consensus        59 ~D~~d-~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g~  112 (292)
                      .++.+ .+...+.+.++|+||.+...  ......+-+.|++++ ++.+.-+.+|.
T Consensus        98 ~~~~~~~~~~~~~~~~~dvVi~~~d~--~~~~~~ln~~c~~~~-ip~i~~~~~G~  149 (198)
T cd01485          98 EDSLSNDSNIEEYLQKFTLVIATEEN--YERTAKVNDVCRKHH-IPFISCATYGL  149 (198)
T ss_pred             cccccchhhHHHHHhCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEEeecC
Confidence            55542 44556678899999987543  456677888999988 76655555443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.29  E-value=0.0011  Score=57.06  Aligned_cols=145  Identities=12%  Similarity=0.054  Sum_probs=80.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-------CEEEEecCCCCC-CCcchhhHhhhh---cCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-------PTFALVRESTAS-DPVKGKLIEIFK---NLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~-~~~~~~~~~~~~---~~~v~~v~~D~~d~~~~~~~   70 (292)
                      +||.|+||+|.+|..++..|...|.       ++..++++.... .....-.+.+..   ..++++ ..  .+    .+.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~--~~----~~~   75 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-TD--DP----NVA   75 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-ec--Cc----HHH
Confidence            5899999999999999999998873       588888853321 011111111111   012222 11  12    356


Q ss_pred             HccCCEEEEcCcCCC-------------chhHHHHHHHHHHhCC-cceeec-cCCCCCCccC------Cc-cCCCCcchH
Q 039623           71 IKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEAGN-VKRFLP-SEFGNDVDRS------QN-VVEPAKSAY  128 (292)
Q Consensus        71 ~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~~-~~~~i~-s~~g~~~~~~------~~-~~~~~~~~~  128 (292)
                      ++++|+||.+||...             ....+.+.+.+.+++. -..++. |-   +.+..      .. ..++.+.+.
T Consensus        76 ~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN---PvD~~t~~~~k~sg~~p~~~ViG  152 (322)
T cd01338          76 FKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN---PCNTNALIAMKNAPDIPPDNFTA  152 (322)
T ss_pred             hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC---cHHHHHHHHHHHcCCCChHheEE
Confidence            789999999999865             4446666666666651 112222 21   00000      11 122333343


Q ss_pred             HHHHHHHHHHH----HcCccEEEEecce-eccc
Q 039623          129 ADKIKIRRAIE----AEGIQYTYVSCNC-FAGY  156 (292)
Q Consensus       129 ~~K~~~e~~~~----~~~~~~~~ir~~~-~~~~  156 (292)
                      .+++..+++..    ..+++...+|.-+ +++.
T Consensus       153 ~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         153 MTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             ehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence            36666555443    4688888888644 4544

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.29  E-value=0.0011  Score=56.94  Aligned_cols=88  Identities=15%  Similarity=0.101  Sum_probs=55.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhH-hhhhcC------CcEEEECCCCCHHHHHHHHc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLI-EIFKNL------GVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~------~v~~v~~D~~d~~~~~~~~~   72 (292)
                      ||||.|+|| |.+|..++..+...|. +|.+++++.     ++.+.. .++.+.      ...+ .. -.|   + +.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~-----~~~~~~~~dl~~~~~~~~~~~~i-~~-~~d---~-~~~~   69 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVE-----GVPQGKALDIAEAAPVEGFDTKI-TG-TND---Y-EDIA   69 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCC-----chhHHHHHHHHhhhhhcCCCcEE-Ee-CCC---H-HHHC
Confidence            899999997 9999999999998875 899999973     332111 111111      1111 11 012   3 3478


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.+++.+.             ....+.+++.+.+..
T Consensus        70 ~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~  110 (307)
T PRK06223         70 GSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA  110 (307)
T ss_pred             CCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999998654             344555555555554

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.28  E-value=0.00078  Score=57.02  Aligned_cols=70  Identities=14%  Similarity=0.153  Sum_probs=48.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhc---CCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKN---LGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~---~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ++|+|+| +|..|++++..|.+.|. +|++++|+     .+|.+.+.....   ....+..  .   +++.+.+.++|+|
T Consensus       128 k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~-----~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~~~aDiV  196 (284)
T PRK12549        128 ERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVD-----PARAAALADELNARFPAARATA--G---SDLAAALAAADGL  196 (284)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHHHhhCCCeEEEe--c---cchHhhhCCCCEE
Confidence            4799999 57799999999999996 79999998     666655543221   1122221  1   2234566789999


Q ss_pred             EEcCc
Q 039623           78 ISTVS   82 (292)
Q Consensus        78 i~~a~   82 (292)
                      |++..
T Consensus       197 InaTp  201 (284)
T PRK12549        197 VHATP  201 (284)
T ss_pred             EECCc
Confidence            99943

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.27  E-value=0.0052  Score=46.34  Aligned_cols=103  Identities=19%  Similarity=0.252  Sum_probs=66.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC--------------CCcchhhHhhh---hcCC--cEEEECCCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS--------------DPVKGKLIEIF---KNLG--VNVLYGDLQ   62 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~~---~~~~--v~~v~~D~~   62 (292)
                      +|+|.|+ |.+|+.+++.|...|. ++++++.+.-..              -..|.+.+...   .+++  ++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            6899995 8899999999999996 677776552110              01122222211   1233  444555554


Q ss_pred             CHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccCC
Q 039623           63 DHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEF  110 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~  110 (292)
                      +. ...+.++++|+||.+...  ......+.+.|++++ ++.+.....
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~--~~~~~~l~~~~~~~~-i~~i~~~~~  123 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN--IAVRRALNRACKELG-IPVIDAGGL  123 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEcCC
Confidence            43 335777899999998876  466778889999987 555544443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=97.26  E-value=0.0028  Score=55.26  Aligned_cols=34  Identities=29%  Similarity=0.408  Sum_probs=29.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~   34 (292)
                      |++|.|+|+||.||+..+..+.+.  .++|.+++-+
T Consensus         1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~   36 (385)
T PRK05447          1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAG   36 (385)
T ss_pred             CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcC
Confidence            889999999999999999888765  5899999743

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.25  E-value=0.001  Score=57.03  Aligned_cols=90  Identities=21%  Similarity=0.245  Sum_probs=58.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhh---cCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFK---NLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~---~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      +||.|+| +|.+|+.++..|...|  +++.+++|+.... ......+.+..   ..+..+...   +.    +.++++|+
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~-~~~a~dL~~~~~~~~~~~~i~~~---~~----~~l~~aDI   71 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKA-EGEALDLEDALAFLPSPVKIKAG---DY----SDCKDADI   71 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchh-hHhHhhHHHHhhccCCCeEEEcC---CH----HHhCCCCE
Confidence            5899999 5999999999999998  6899999983321 11111111111   122223222   32    23579999


Q ss_pred             EEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           77 VISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        77 vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ||+++|...             ....+.+.+.+++++
T Consensus        72 VIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~  108 (306)
T cd05291          72 VVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG  108 (306)
T ss_pred             EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999864             445666777777765

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.24  E-value=0.0019  Score=56.00  Aligned_cols=100  Identities=23%  Similarity=0.294  Sum_probs=67.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC------------C----Ccchhh----Hhhh-hcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS------------D----PVKGKL----IEIF-KNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------------~----~~~~~~----~~~~-~~~~v~~v~~   59 (292)
                      ++|+|.|+ |.+|+.+++.|...|. ++++++++.-..            +    ..|.+.    ++.+ ..-.++.+..
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~  103 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ  103 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            47999995 8899999999999996 888888763110            0    012211    1222 1123556666


Q ss_pred             CCCCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           60 DLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        60 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +++ .+.+.++++++|+||.+....  .....+.++|.+.+ ++.+.
T Consensus       104 ~~~-~~~~~~~~~~~DlVid~~Dn~--~~r~~ln~~~~~~~-iP~i~  146 (339)
T PRK07688        104 DVT-AEELEELVTGVDLIIDATDNF--ETRFIVNDAAQKYG-IPWIY  146 (339)
T ss_pred             cCC-HHHHHHHHcCCCEEEEcCCCH--HHHHHHHHHHHHhC-CCEEE
Confidence            764 456778899999999986643  45557778899888 66554

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.22  E-value=0.00056  Score=59.18  Aligned_cols=87  Identities=18%  Similarity=0.319  Sum_probs=55.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEE-----ECCCCCHHHHHHHHccCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVL-----YGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v-----~~D~~d~~~~~~~~~~~d   75 (292)
                      ||+|.|.| .|.+|..++..|.+.|++|++++|+     +++.+.+.... ......     ...+.-.++..+.++++|
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   73 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARD-----PEQAAEINADR-ENPRYLPGIKLPDNLRATTDLAEALADAD   73 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHcC-cccccCCCCcCCCCeEEeCCHHHHHhCCC
Confidence            89999999 6999999999999999999999998     44443332210 000000     001111123445677899


Q ss_pred             EEEEcCcCCCchhHHHHHHHHH
Q 039623           76 VVISTVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~   97 (292)
                      +||-+....   ....+++...
T Consensus        74 ~vi~~v~~~---~~~~v~~~l~   92 (325)
T PRK00094         74 LILVAVPSQ---ALREVLKQLK   92 (325)
T ss_pred             EEEEeCCHH---HHHHHHHHHH
Confidence            999988853   3444444443

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.22  E-value=0.0013  Score=55.34  Aligned_cols=71  Identities=21%  Similarity=0.251  Sum_probs=47.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC-CcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL-GVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++++|+|+ |.+|+.++..|.+.|++|++..|+     .++.+.+...... +. ....+.   +.  ..+.++|+||++
T Consensus       118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~-----~~~~~~la~~~~~~~~-~~~~~~---~~--~~~~~~DivIna  185 (270)
T TIGR00507       118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRT-----VSKAEELAERFQRYGE-IQAFSM---DE--LPLHRVDLIINA  185 (270)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhcCc-eEEech---hh--hcccCccEEEEC
Confidence            57999996 899999999999999999999998     5555443332111 11 111121   11  123478999999


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      .+..
T Consensus       186 tp~g  189 (270)
T TIGR00507       186 TSAG  189 (270)
T ss_pred             CCCC
Confidence            8764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08223 hypothetical protein; Validated

Probab=97.22  E-value=0.0053  Score=51.59  Aligned_cols=107  Identities=15%  Similarity=0.152  Sum_probs=67.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCC--------------CcchhhHhh-h--hcCC--cEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASD--------------PVKGKLIEI-F--KNLG--VNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~~~~~~~~~-~--~~~~--v~~v~~D~   61 (292)
                      .+|+|.| .|.+|+.+++.|...|. ++++++.+.-..+              ..|.+.... +  .++.  ++.+...+
T Consensus        28 s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l  106 (287)
T PRK08223         28 SRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGI  106 (287)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEeccc
Confidence            4799999 57799999999999994 6777765522110              112222211 1  1344  44555555


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccCCC
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFG  111 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g  111 (292)
                      + ++...++++++|+|+.+.-...+..-..+-++|.+++ ++.+.-+..|
T Consensus       107 ~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~-iP~V~~~~~g  154 (287)
T PRK08223        107 G-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRG-IPALTAAPLG  154 (287)
T ss_pred             C-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcC-CCEEEEeccC
Confidence            4 4456778899999997765443456677778899988 6555434433

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.20  E-value=0.002  Score=58.33  Aligned_cols=89  Identities=12%  Similarity=0.146  Sum_probs=61.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi~~   80 (292)
                      ++|+|+|++| +|...++.|.+.|++|.+.+++...    .......+...++.+..++..  ..   .+. ++|.||..
T Consensus         6 k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~----~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s   75 (447)
T PRK02472          6 KKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFS----ENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKN   75 (447)
T ss_pred             CEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCcc----chhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEEC
Confidence            5799999877 9999999999999999999876422    112223344557777665422  22   233 48999999


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcce
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKR  104 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~  104 (292)
                      +|...   ...++++|++.+ ++.
T Consensus        76 ~gi~~---~~~~~~~a~~~~-i~v   95 (447)
T PRK02472         76 PGIPY---TNPMVEKALEKG-IPI   95 (447)
T ss_pred             CCCCC---CCHHHHHHHHCC-CcE
Confidence            88543   445777777776 543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.20  E-value=0.0025  Score=51.18  Aligned_cols=103  Identities=19%  Similarity=0.163  Sum_probs=66.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC--------------CCcchhhHhh-h--hcCCc--EEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS--------------DPVKGKLIEI-F--KNLGV--NVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~-~--~~~~v--~~v~~D~   61 (292)
                      .+|+|.| .|.+|+++++.|...|. ++++++++.-..              -..|.+.+.. +  .++.+  +.+..++
T Consensus        22 ~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i  100 (202)
T TIGR02356        22 SHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV  100 (202)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC
Confidence            4799999 68899999999999995 788888762211              0112222111 1  12333  3444444


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                       +.+.+.+.++++|+||.+....  .....+.+.|++++ ++.+..+.
T Consensus       101 -~~~~~~~~~~~~D~Vi~~~d~~--~~r~~l~~~~~~~~-ip~i~~~~  144 (202)
T TIGR02356       101 -TAENLELLINNVDLVLDCTDNF--ATRYLINDACVALG-TPLISAAV  144 (202)
T ss_pred             -CHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEEEEe
Confidence             4456778889999999987543  45556778888887 65444333

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.19  E-value=0.0025  Score=55.53  Aligned_cols=97  Identities=19%  Similarity=0.214  Sum_probs=55.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhh---h-cCC-c-EEEECCCCCHHHHHHHHccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIF---K-NLG-V-NVLYGDLQDHESLIKAIKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~---~-~~~-v-~~v~~D~~d~~~~~~~~~~~   74 (292)
                      +||+|+||||++|++|++.|.+++ +++..+.++.... ..........   . ..+ + ....-++ +++    .+.++
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~   74 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSA-GKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDV   74 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhc-CCcchhhccccccCCCccccceeEEEeC-CHH----HhccC
Confidence            589999999999999999998876 6888885442111 1111100000   0 000 1 1111111 222    34689


Q ss_pred             CEEEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           75 DVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        75 d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      |+|+.+.+..   .+..+.+++.+.| ++.|..|
T Consensus        75 DvVf~a~p~~---~s~~~~~~~~~~G-~~VIDls  104 (341)
T TIGR00978        75 DIVFSALPSE---VAEEVEPKLAEAG-KPVFSNA  104 (341)
T ss_pred             CEEEEeCCHH---HHHHHHHHHHHCC-CEEEECC
Confidence            9999988754   3445556777778 6655543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=97.18  E-value=0.0012  Score=55.35  Aligned_cols=82  Identities=21%  Similarity=0.284  Sum_probs=49.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEE-EecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFA-LVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ||||.|.| .|.+|+.+++.|.+.  ++++.+ .+|+     +++.+.+..  ..+...    ..|   +.+++.++|+|
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~-----~~~a~~~a~--~~~~~~----~~~---~~ell~~~DvV   65 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN-----LEKAENLAS--KTGAKA----CLS---IDELVEDVDLV   65 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC-----HHHHHHHHH--hcCCee----ECC---HHHHhcCCCEE
Confidence            89999999 699999999999886  356554 4454     444433222  112211    123   34445789999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +.|++..   ....++..+.++|
T Consensus        66 vi~a~~~---~~~~~~~~al~~G   85 (265)
T PRK13304         66 VECASVN---AVEEVVPKSLENG   85 (265)
T ss_pred             EEcCChH---HHHHHHHHHHHcC
Confidence            9987643   2334444444455

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.16  E-value=0.00093  Score=56.84  Aligned_cols=89  Identities=22%  Similarity=0.327  Sum_probs=51.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcE---EEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVN---VLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~---~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+||.|.||||+.|..|++.|..+. .++...+.+..     +-+.+... .++..   -......|++.+  ..+++|+
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~-----~g~~~~~~-~p~l~g~~~l~~~~~~~~~~--~~~~~Dv   73 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRER-----AGKPVSDV-HPNLRGLVDLPFQTIDPEKI--ELDECDV   73 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhh-----cCCchHHh-CcccccccccccccCChhhh--hcccCCE
Confidence            6899999999999999999999986 56655544321     11111211 22222   112222233333  3456999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhC
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ||.+.+..   ....+.......+
T Consensus        74 vFlalPhg---~s~~~v~~l~~~g   94 (349)
T COG0002          74 VFLALPHG---VSAELVPELLEAG   94 (349)
T ss_pred             EEEecCch---hHHHHHHHHHhCC
Confidence            99988754   3444444444445

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.16  E-value=0.0019  Score=54.54  Aligned_cols=74  Identities=18%  Similarity=0.232  Sum_probs=49.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcC--CcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNL--GVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++++|+|| |..|++++-.|.+.|. +++++.|+     .+|.+.+......  +...+..  .+...+...+.++|+||
T Consensus       128 k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~-----~~ka~~La~~~~~~~~~~~~~~--~~~~~~~~~~~~~divI  199 (283)
T PRK14027        128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVVG--VDARGIEDVIAAADGVV  199 (283)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHHhhccCcceEEe--cCHhHHHHHHhhcCEEE
Confidence            47999995 8899999999999995 78999998     6676555433221  1111111  12223334456799999


Q ss_pred             EcCcC
Q 039623           79 STVSR   83 (292)
Q Consensus        79 ~~a~~   83 (292)
                      |+...
T Consensus       200 NaTp~  204 (283)
T PRK14027        200 NATPM  204 (283)
T ss_pred             EcCCC
Confidence            98764

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.16  E-value=0.003  Score=59.50  Aligned_cols=88  Identities=22%  Similarity=0.358  Sum_probs=69.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|.| .|-+|+.+++.|.++|+++++++.+     +++.+.   +...+..++.||.+|++.+.++ ++++|.++-+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v~~---~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        401 PRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHD-----PDHIET---LRKFGMKVFYGDATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             CcEEEEe-cChHHHHHHHHHHhCCCCEEEEECC-----HHHHHH---HHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence            3688999 6999999999999999999999998     666543   3456899999999999988764 4579999977


Q ss_pred             CcCCCchhHHHHHHHHHHhC
Q 039623           81 VSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ....  .....++..+++..
T Consensus       472 ~~d~--~~n~~i~~~ar~~~  489 (621)
T PRK03562        472 IDDP--QTSLQLVELVKEHF  489 (621)
T ss_pred             eCCH--HHHHHHHHHHHHhC
Confidence            7544  45566667777664

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.14  E-value=0.002  Score=54.94  Aligned_cols=76  Identities=17%  Similarity=0.233  Sum_probs=50.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |++|.|.||||++|..|++.|.++. .++..+..+..     +                 ++.+   ....++++|+||.
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~-----~-----------------~~~~---~~~~~~~~DvvFl   56 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKR-----K-----------------DAAA---RRELLNAADVAIL   56 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCC-----C-----------------cccC---chhhhcCCCEEEE
Confidence            3689999999999999999998886 46665554311     0                 1111   1235568999998


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +.+..   ....+...+.+.| + ++|
T Consensus        57 alp~~---~s~~~~~~~~~~g-~-~VI   78 (313)
T PRK11863         57 CLPDD---AAREAVALIDNPA-T-RVI   78 (313)
T ss_pred             CCCHH---HHHHHHHHHHhCC-C-EEE
Confidence            88643   4555666665666 4 354

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.14  E-value=0.00085  Score=60.37  Aligned_cols=69  Identities=36%  Similarity=0.468  Sum_probs=48.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+|+||+|.+|..+++.|.+.|++|++.+|+     +++.....  ...++.. .      .+..+.+.++|+||.++
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~-----~~~~~~~a--~~~gv~~-~------~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRD-----PKKGKEVA--KELGVEY-A------NDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECC-----hHHHHHHH--HHcCCee-c------cCHHHHhccCCEEEEec
Confidence            689999999999999999999999999999998     43321111  1123321 1      12345567889999888


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus        67 p~~   69 (437)
T PRK08655         67 PIN   69 (437)
T ss_pred             CHH
Confidence            753

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.13  E-value=0.003  Score=53.96  Aligned_cols=93  Identities=18%  Similarity=0.083  Sum_probs=58.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |||.|+|++|.+|++++-.|...+  .++..++.+  .. ....-.+.+.. ....+....  ..+++.+.++++|+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a-~g~alDL~~~~-~~~~i~~~~--~~~~~y~~~~daDivvi   74 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NT-PGVAADLSHIN-TPAKVTGYL--GPEELKKALKGADVVVI   74 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--cc-ceeehHhHhCC-CcceEEEec--CCCchHHhcCCCCEEEE
Confidence            689999999999999999998887  478888876  21 22221122211 112222110  11234567889999999


Q ss_pred             cCcCCC-------------chhHHHHHHHHHHhC
Q 039623           80 TVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        80 ~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +||...             ....+.+.+...+++
T Consensus        75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~  108 (310)
T cd01337          75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC  108 (310)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999865             344555566666665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=97.13  E-value=0.0041  Score=52.16  Aligned_cols=84  Identities=17%  Similarity=0.163  Sum_probs=48.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||||.|.|. |.+|+.+++.|.+. +.++.++......  .++.   ......++. +.   .|.+.+   -.++|+|+.
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~--~~~~---~~~~~~~~~-~~---~d~~~l---~~~~DvVve   67 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHS--IDAV---RRALGEAVR-VV---SSVDAL---PQRPDLVVE   67 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCC--HHHH---hhhhccCCe-ee---CCHHHh---ccCCCEEEE
Confidence            899999996 99999999999886 5677666533111  1111   111111211 11   233333   246899999


Q ss_pred             cCcCCCchhHHHHHHHHHHhC
Q 039623           80 TVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      |++..   ........+.++|
T Consensus        68 ~t~~~---~~~e~~~~aL~aG   85 (265)
T PRK13303         68 CAGHA---ALKEHVVPILKAG   85 (265)
T ss_pred             CCCHH---HHHHHHHHHHHcC
Confidence            88754   2344445555555

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.13  E-value=0.0063  Score=45.41  Aligned_cols=100  Identities=19%  Similarity=0.343  Sum_probs=66.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC--------------CCcchhhHhh----h-hcCCcEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS--------------DPVKGKLIEI----F-KNLGVNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~----~-~~~~v~~v~~D~   61 (292)
                      ++|+|.| .|.+|+.+++.|...|. +++.++...-..              -..|.+.+..    + ...+++.+..++
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            4799999 68899999999999996 677777652110              0112222222    1 123456666666


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                       +.+.+.++++++|+||.+...  ......+.+.|++++ ++ +|.
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d~--~~~~~~l~~~~~~~~-~p-~i~  122 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVDS--LAARLLLNEICREYG-IP-FID  122 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESSS--HHHHHHHHHHHHHTT--E-EEE
T ss_pred             -ccccccccccCCCEEEEecCC--HHHHHHHHHHHHHcC-CC-EEE
Confidence             556678888999999998765  456667888899988 54 444

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.12  E-value=0.0021  Score=54.77  Aligned_cols=68  Identities=16%  Similarity=0.323  Sum_probs=51.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++++|+| .|.+|+.+++.|.+.|.+|++.+|+     +++.+..   ...+.+.+     +.+++.+.+.++|+||+++
T Consensus       153 ~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~-----~~~~~~~---~~~G~~~~-----~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        153 SNVLVLG-FGRTGMTLARTLKALGANVTVGARK-----SAHLARI---TEMGLSPF-----HLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHH---HHcCCeee-----cHHHHHHHhCCCCEEEECC
Confidence            5799999 5889999999999999999999998     4443222   23344433     2345677888999999987


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      +.
T Consensus       219 p~  220 (296)
T PRK08306        219 PA  220 (296)
T ss_pred             Ch
Confidence            54

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=97.12  E-value=0.014  Score=48.99  Aligned_cols=92  Identities=21%  Similarity=0.312  Sum_probs=57.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEec-CCCCCCCcchhhHhhhh---cCCcEEEECCCCCHHHHHHHHccCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVR-ESTASDPVKGKLIEIFK---NLGVNVLYGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r-~~~~~~~~~~~~~~~~~---~~~v~~v~~D~~d~~~~~~~~~~~d   75 (292)
                      |+||.|.|++|.+|+.+++.+.+. +.++.++.. ..+..   ..+....+.   ..++.+ .   .|.+.+   ...+|
T Consensus         1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~---~~~~~~~~~~~~~~gv~~-~---~d~~~l---~~~~D   70 (266)
T TIGR00036         1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSL---QGTDAGELAGIGKVGVPV-T---DDLEAV---ETDPD   70 (266)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccc---cCCCHHHhcCcCcCCcee-e---CCHHHh---cCCCC
Confidence            789999999999999999999875 688776644 32110   011111111   112111 1   233333   35689


Q ss_pred             EEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           76 VVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +||.+..   ...+...++.|.++| +..++
T Consensus        71 vVIdfT~---p~~~~~~~~~al~~g-~~vVi   97 (266)
T TIGR00036        71 VLIDFTT---PEGVLNHLKFALEHG-VRLVV   97 (266)
T ss_pred             EEEECCC---hHHHHHHHHHHHHCC-CCEEE
Confidence            9999874   356778888888888 55554

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.11  E-value=0.002  Score=54.54  Aligned_cols=69  Identities=20%  Similarity=0.326  Sum_probs=50.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++++|+| .|.+|+.+++.|...|.+|++.+|+     +++....   ...+...+     +.+++.+.+.++|+||++.
T Consensus       152 k~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~-----~~~~~~~---~~~g~~~~-----~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       152 SNVMVLG-FGRTGMTIARTFSALGARVFVGARS-----SADLARI---TEMGLIPF-----PLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             CEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHH---HHCCCeee-----cHHHHHHHhccCCEEEECC
Confidence            5799999 5889999999999999999999998     4333221   12233322     2455777888999999987


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       218 P~~  220 (287)
T TIGR02853       218 PAL  220 (287)
T ss_pred             ChH
Confidence            643

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.09  E-value=0.0023  Score=56.37  Aligned_cols=72  Identities=18%  Similarity=0.210  Sum_probs=54.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      +|+|+|+ |-+|...++.|...|.+|++++|+     +++.+.+.....   ..+..+..+.+.+.+.++++|+||++++
T Consensus       169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~-----~~~~~~l~~~~g---~~v~~~~~~~~~l~~~l~~aDvVI~a~~  239 (370)
T TIGR00518       169 DVTIIGG-GVVGTNAAKMANGLGATVTILDIN-----IDRLRQLDAEFG---GRIHTRYSNAYEIEDAVKRADLLIGAVL  239 (370)
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHHHhcC---ceeEeccCCHHHHHHHHccCCEEEEccc
Confidence            6999995 999999999999999999999998     555443322211   1233455677888889999999999985


Q ss_pred             C
Q 039623           83 R   83 (292)
Q Consensus        83 ~   83 (292)
                      .
T Consensus       240 ~  240 (370)
T TIGR00518       240 I  240 (370)
T ss_pred             c
Confidence            4

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=97.08  E-value=0.0038  Score=52.39  Aligned_cols=92  Identities=22%  Similarity=0.294  Sum_probs=64.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc-hhhHhhh----------hcCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVK-GKLIEIF----------KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~----------~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      ++|.++| .|-+|...++.|+++||+|++.+|+     ++| .+.+...          .-...+++..-+.|.+++.+.
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~-----~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V   74 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRT-----PEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAV   74 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCC-----hhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHH
Confidence            5799999 8999999999999999999999999     555 3222220          112456666666677777666


Q ss_pred             HccC----------CEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           71 IKQV----------DVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~~~~----------d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +.+.          .++|.+.... ...++.+.+.+++.|
T Consensus        75 ~~g~~g~~~~~~~G~i~IDmSTis-p~~a~~~a~~~~~~G  113 (286)
T COG2084          75 LFGENGLLEGLKPGAIVIDMSTIS-PETARELAAALAAKG  113 (286)
T ss_pred             HhCccchhhcCCCCCEEEECCCCC-HHHHHHHHHHHHhcC
Confidence            6432          3444444433 477888888888877

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=97.03  E-value=0.0037  Score=53.36  Aligned_cols=33  Identities=30%  Similarity=0.421  Sum_probs=31.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |++|.|+| .|.+|..+++.|.++|++|++.+|+
T Consensus         1 m~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~   33 (296)
T PRK15461          1 MAAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVN   33 (296)
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCC
Confidence            78999999 8999999999999999999999998

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.03  E-value=0.0027  Score=56.11  Aligned_cols=68  Identities=25%  Similarity=0.362  Sum_probs=53.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |++|+|+|+ |.+|+-++..+.+.|++|++++.++...  .     ..   ..-..+.+|+.|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~p--a-----~~---~ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSP--A-----AQ---VADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc--h-----hH---hCceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            789999995 8999999999999999999998764321  0     00   1224667899999999999999998754

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.03  E-value=0.00095  Score=57.88  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=51.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC-----CcEEEECCCCCHHHHHHHHccCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL-----GVNVLYGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~v~~v~~D~~d~~~~~~~~~~~d   75 (292)
                      ||+|.|+| +|-+|..++..|.+.|++|++.+|+     +++.+.+......     +... ...+.-.++..++++++|
T Consensus         4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~-----~~~~~~i~~~~~~~~~~~g~~~-~~~~~~~~~~~e~~~~aD   76 (328)
T PRK14618          4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARR-----PEFAAALAAERENREYLPGVAL-PAELYPTADPEEALAGAD   76 (328)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHhCcccccCCCCcC-CCCeEEeCCHHHHHcCCC
Confidence            58999999 7999999999999999999999997     5554444332100     1100 000111123445667899


Q ss_pred             EEEEcCcCC
Q 039623           76 VVISTVSRG   84 (292)
Q Consensus        76 ~vi~~a~~~   84 (292)
                      +||.+....
T Consensus        77 ~Vi~~v~~~   85 (328)
T PRK14618         77 FAVVAVPSK   85 (328)
T ss_pred             EEEEECchH
Confidence            999888765

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.02  E-value=0.0022  Score=53.74  Aligned_cols=91  Identities=16%  Similarity=0.158  Sum_probs=59.3

Q ss_pred             EEEEccCCcchHHHHHHHHhCC----CCEEEEecCCCCCCCcchhhHhhhhcC--CcEEEECCCCCHHHHHHHHccCCEE
Q 039623            4 TLIIGGTGYIGKKILEASVKAG----HPTFALVRESTASDPVKGKLIEIFKNL--GVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |.|+||+|.+|..++..|+..|    .++..++++.... ......++.....  ..++...     +++.+.++++|.|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l-~~~~~dl~~~~~~~~~~~i~~~-----~d~~~~~~~aDiV   74 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKL-KGVAMDLQDAVEPLADIKVSIT-----DDPYEAFKDADVV   74 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccc-hHHHHHHHHhhhhccCcEEEEC-----CchHHHhCCCCEE
Confidence            5799998999999999999988    6899999874322 1111222222221  1222221     2345678899999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      |.+++...             +...+.+.+.+++..
T Consensus        75 v~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~  110 (263)
T cd00650          75 IITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS  110 (263)
T ss_pred             EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            99998755             445666666666665

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.01  E-value=0.0022  Score=57.14  Aligned_cols=72  Identities=21%  Similarity=0.230  Sum_probs=54.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|.| +|.+|+.+++.|.+.|. ++++..|+     .++.+.+..... +.     .....+++.+.+..+|+||++
T Consensus       182 kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt-----~~ra~~La~~~~-~~-----~~~~~~~l~~~l~~aDiVI~a  249 (414)
T PRK13940        182 KNVLIIG-AGQTGELLFRHVTALAPKQIMLANRT-----IEKAQKITSAFR-NA-----SAHYLSELPQLIKKADIIIAA  249 (414)
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHhc-CC-----eEecHHHHHHHhccCCEEEEC
Confidence            5799999 59999999999999994 78899998     666655443221 11     222345677888899999999


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .+...
T Consensus       250 T~a~~  254 (414)
T PRK13940        250 VNVLE  254 (414)
T ss_pred             cCCCC
Confidence            99877

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.01  E-value=0.0024  Score=49.46  Aligned_cols=55  Identities=18%  Similarity=0.315  Sum_probs=45.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+|+.+.+|..+++.|.++|.+|++..|+.                             +.+.+.+..+|+||.+.
T Consensus        45 k~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~aDiVIsat   95 (168)
T cd01080          45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQADIVIVAV   95 (168)
T ss_pred             CEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhhCCEEEEcC
Confidence            5899999866679999999999999998888861                             24567888999999999


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus        96 ~~~~   99 (168)
T cd01080          96 GKPG   99 (168)
T ss_pred             CCCc
Confidence            8765

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.00  E-value=0.0059  Score=52.98  Aligned_cols=129  Identities=18%  Similarity=0.206  Sum_probs=78.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---------------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---------------   64 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---------------   64 (292)
                      |.+|||.| ||=.+-+++..|.+.+ ++|=...|.     +.|.+.+-+....+-..+..++.+.               
T Consensus         1 m~~VLI~G-tGPvAiQLAv~lk~~~~~~vGi~~R~-----S~rSq~f~~aL~~~~~~~~v~vqn~~h~~l~G~~~id~~~   74 (429)
T PF10100_consen    1 MGNVLIVG-TGPVAIQLAVILKKHGNCRVGIVGRE-----SVRSQRFFEALARSDGLFEVSVQNEQHQALSGECTIDHVF   74 (429)
T ss_pred             CCceEEEc-CCHHHHHHHHHHHhccCceeeeecCc-----chhHHHHHHHHHhCCCEEEEeecchhhhhhcCeEEhhHhh
Confidence            88999999 8999999999998887 467777886     3444333332233333444444332               


Q ss_pred             HHHHHHHccCCEEEEcCcCCC-chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHc
Q 039623           65 ESLIKAIKQVDVVISTVSRGQ-IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAE  141 (292)
Q Consensus        65 ~~~~~~~~~~d~vi~~a~~~~-~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~  141 (292)
                      +++.++....|.+|.+..... ....+.+-..+.+ + ++++|.  ..+|                  |...++.++...
T Consensus        75 ~~~~~i~g~WdtlILavtaDAY~~VL~ql~~~~L~-~-vk~iVLvSPtfG------------------S~~lv~~~l~~~  134 (429)
T PF10100_consen   75 QDYEEIEGEWDTLILAVTADAYLDVLQQLPWEVLK-R-VKSIVLVSPTFG------------------SHLLVKGFLNDL  134 (429)
T ss_pred             cCHHHhcccccEEEEEechHHHHHHHHhcCHHHHh-h-CCEEEEECcccc------------------hHHHHHHHHHhc
Confidence            123333346899998877655 4455555555544 3 788774  3444                  455566666666


Q ss_pred             CccEEEEecceecc
Q 039623          142 GIQYTYVSCNCFAG  155 (292)
Q Consensus       142 ~~~~~~ir~~~~~~  155 (292)
                      +...-+|..+.|+|
T Consensus       135 ~~~~EVISFStY~g  148 (429)
T PF10100_consen  135 GPDAEVISFSTYYG  148 (429)
T ss_pred             CCCceEEEeecccc
Confidence            65666665555544

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.00  E-value=0.0061  Score=52.18  Aligned_cols=32  Identities=22%  Similarity=0.399  Sum_probs=30.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+|.|+| .|.+|+.+++.|++.|++|.+.+|+
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~   32 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRN   32 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECC
Confidence            5899999 8999999999999999999999998

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.00  E-value=0.00047  Score=58.65  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=51.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEE----------ECCCCCHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVL----------YGDLQDHES   66 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v----------~~D~~d~~~   66 (292)
                      |++|.|+| .|.+|+.++..|.++|++|++++++     +++.+.+...    ...+++.-          ...++-.++
T Consensus         1 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~   74 (288)
T PRK09260          1 IEKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIK-----QEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLD   74 (288)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCC-----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCc
Confidence            57899999 5999999999999999999999998     5544332211    01111100          000111123


Q ss_pred             HHHHHccCCEEEEcCcCC
Q 039623           67 LIKAIKQVDVVISTVSRG   84 (292)
Q Consensus        67 ~~~~~~~~d~vi~~a~~~   84 (292)
                      +.++++++|+||.|....
T Consensus        75 ~~~~~~~aD~Vi~avpe~   92 (288)
T PRK09260         75 LKAAVADADLVIEAVPEK   92 (288)
T ss_pred             HHHhhcCCCEEEEeccCC
Confidence            556788999999988754

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.98  E-value=0.0027  Score=54.99  Aligned_cols=78  Identities=24%  Similarity=0.294  Sum_probs=54.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc----CCcEE-EECC-----CCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN----LGVNV-LYGD-----LQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~v~~-v~~D-----~~d~~~~~~~~   71 (292)
                      |||.|.| |||+|......|.+.||+|++++.+     ++|.+.+..-..    ++++- +.-+     ++=-.++.+++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid-----~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~   74 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDID-----ESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV   74 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHH
Confidence            7999999 8999999999999999999999998     666655433211    11110 0001     11123466788


Q ss_pred             ccCCEEEEcCcCCC
Q 039623           72 KQVDVVISTVSRGQ   85 (292)
Q Consensus        72 ~~~d~vi~~a~~~~   85 (292)
                      +..|++|-+.|-+.
T Consensus        75 ~~adv~fIavgTP~   88 (414)
T COG1004          75 KDADVVFIAVGTPP   88 (414)
T ss_pred             hcCCEEEEEcCCCC
Confidence            89999999998765

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.98  E-value=0.0034  Score=49.28  Aligned_cols=33  Identities=24%  Similarity=0.301  Sum_probs=29.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|.|+| .|.||+.+++.|..-|.+|++.+|+.
T Consensus        37 ~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~   69 (178)
T PF02826_consen   37 KTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP   69 (178)
T ss_dssp             SEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC
T ss_pred             CEEEEEE-EcCCcCeEeeeeecCCceeEEecccC
Confidence            5799999 79999999999999999999999984

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.98  E-value=0.0021  Score=54.86  Aligned_cols=70  Identities=20%  Similarity=0.228  Sum_probs=51.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|..+++.|.++|++|.+.+|+     +++.+.+..   .+...    ..+.+++.+.+..+|+|+.+.
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~-----~~~~~~l~~---~g~~~----~~s~~~~~~~~~~~dvIi~~v   67 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHD-----QDAVKAMKE---DRTTG----VANLRELSQRLSAPRVVWVMV   67 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHH---cCCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence            5899999 7999999999999999999999998     555544332   23221    134555555666789999887


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      ...
T Consensus        68 p~~   70 (298)
T TIGR00872        68 PHG   70 (298)
T ss_pred             Cch
Confidence            654

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.97  E-value=0.015  Score=48.03  Aligned_cols=104  Identities=18%  Similarity=0.151  Sum_probs=65.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCC--------------CcchhhHhh-h--hcCCc--EEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASD--------------PVKGKLIEI-F--KNLGV--NVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~~~~~~~~~-~--~~~~v--~~v~~D~   61 (292)
                      .+|+|.| .|.+|+.+++.|...|. ++++++++.-..+              ..|.+.+.. +  .++.+  +.+...+
T Consensus        25 ~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i  103 (240)
T TIGR02355        25 SRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL  103 (240)
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            4799999 58899999999999994 6777766532210              112221111 1  13444  4444344


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccCC
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEF  110 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~  110 (292)
                       +.+.+.++++++|+||.+....  .....+-++|.+.+ ++.+.-++.
T Consensus       104 -~~~~~~~~~~~~DlVvd~~D~~--~~r~~ln~~~~~~~-ip~v~~~~~  148 (240)
T TIGR02355       104 -DDAELAALIAEHDIVVDCTDNV--EVRNQLNRQCFAAK-VPLVSGAAI  148 (240)
T ss_pred             -CHHHHHHHhhcCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEEEEec
Confidence             4456778889999999987654  44556678888887 655543443

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.96  E-value=0.0012  Score=50.63  Aligned_cols=87  Identities=16%  Similarity=0.290  Sum_probs=55.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc-----CCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN-----LGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ||.|.| +|..|.+++..|.++|++|+...|+     ++..+.++.-..     +++..- ..+.-.+++.++++++|+|
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~-----~~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~I   73 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRD-----EEQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADII   73 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSC-----HHHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEE
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEE
Confidence            689999 6999999999999999999999998     555444433211     111111 1111113456788999999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHh
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEA   99 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~   99 (292)
                      +.+.+.   ...+.+++.++++
T Consensus        74 iiavPs---~~~~~~~~~l~~~   92 (157)
T PF01210_consen   74 IIAVPS---QAHREVLEQLAPY   92 (157)
T ss_dssp             EE-S-G---GGHHHHHHHHTTT
T ss_pred             EecccH---HHHHHHHHHHhhc
Confidence            987764   4556666666553

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.95  E-value=0.0026  Score=54.68  Aligned_cols=72  Identities=21%  Similarity=0.254  Sum_probs=52.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|.|+ |.+|+.+++.|.+.| .+|++++|+     +++.+.+....  +...     .+.+++.+.+.++|+||.+
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~-----~~ra~~la~~~--g~~~-----~~~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRT-----YERAEELAKEL--GGNA-----VPLDELLELLNEADVVISA  245 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHc--CCeE-----EeHHHHHHHHhcCCEEEEC
Confidence            57999995 999999999999876 789999998     66554333221  2222     2334566778889999999


Q ss_pred             CcCCCc
Q 039623           81 VSRGQI   86 (292)
Q Consensus        81 a~~~~~   86 (292)
                      .+....
T Consensus       246 t~~~~~  251 (311)
T cd05213         246 TGAPHY  251 (311)
T ss_pred             CCCCch
Confidence            987654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.94  E-value=0.0041  Score=52.32  Aligned_cols=91  Identities=22%  Similarity=0.254  Sum_probs=67.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|.|+|+.| +|+--++...+-|++|++++++..    .|.+   .+...+.+.+..-..|++...++.+..|.++|++
T Consensus       183 ~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~----kkee---a~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v  254 (360)
T KOG0023|consen  183 KWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSK----KKEE---AIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV  254 (360)
T ss_pred             cEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCch----hHHH---HHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence            4799999988 999999999999999999999842    3332   3345678887777668888888888777777776


Q ss_pred             cCCCchhHHHHHHHHHHhC
Q 039623           82 SRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~  100 (292)
                      ..........+++.++..|
T Consensus       255 ~~~a~~~~~~~~~~lk~~G  273 (360)
T KOG0023|consen  255 SNLAEHALEPLLGLLKVNG  273 (360)
T ss_pred             eeccccchHHHHHHhhcCC
Confidence            6444445566677777655

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.94  E-value=0.0074  Score=51.17  Aligned_cols=79  Identities=16%  Similarity=0.158  Sum_probs=48.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCC--cEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLG--VNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~--v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++++|+|| |..+++++..|...| .+|+++.|+...  .+|.+.+.......  ......++.+.+.+.+.+.++|+||
T Consensus       125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~--~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI  201 (288)
T PRK12749        125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEF--FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT  201 (288)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccH--HHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence            47999995 667999999999998 489999998321  12444433322211  1122223323333455667899999


Q ss_pred             EcCcC
Q 039623           79 STVSR   83 (292)
Q Consensus        79 ~~a~~   83 (292)
                      |+...
T Consensus       202 NaTp~  206 (288)
T PRK12749        202 NGTKV  206 (288)
T ss_pred             ECCCC
Confidence            98754

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.94  E-value=0.0039  Score=53.38  Aligned_cols=92  Identities=20%  Similarity=0.138  Sum_probs=57.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||.|+||+|.+|++++-.|...+.  ++..++++. .. .+..+ +.+.. ....+....  +.+++.+.++++|+||.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~-g~a~D-L~~~~-~~~~i~~~~--~~~~~~~~~~daDivvit   74 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AA-GVAAD-LSHIP-TAASVKGFS--GEEGLENALKGADVVVIP   74 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-Cc-EEEch-hhcCC-cCceEEEec--CCCchHHHcCCCCEEEEe
Confidence            689999999999999999988874  688888874 11 12222 12211 112222101  112245678899999999


Q ss_pred             CcCCC-------------chhHHHHHHHHHHhC
Q 039623           81 VSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        81 a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|...             ....+.+.+...+++
T Consensus        75 aG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~  107 (312)
T TIGR01772        75 AGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC  107 (312)
T ss_pred             CCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC
Confidence            99865             344555555666555

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.94  E-value=0.002  Score=54.98  Aligned_cols=68  Identities=22%  Similarity=0.293  Sum_probs=47.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|.| .|.+|..+++.|.+.|++|.+.+|+     +++.+.+.   ..++..       .+++.++++++|+||-+
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~-----~~~~~~~~---~~g~~~-------~~~~~e~~~~~d~vi~~   65 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRN-----PEAVAEVI---AAGAET-------ASTAKAVAEQCDVIITM   65 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHH---HCCCee-------cCCHHHHHhcCCEEEEe
Confidence            47899999 7999999999999999999999988     44443222   223221       11234456678888877


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      ....
T Consensus        66 vp~~   69 (296)
T PRK11559         66 LPNS   69 (296)
T ss_pred             CCCH
Confidence            6643

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.94  E-value=0.0011  Score=56.37  Aligned_cols=90  Identities=13%  Similarity=0.115  Sum_probs=55.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----h---cCCcEEEE--------CCCCCHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----K---NLGVNVLY--------GDLQDHES   66 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~---~~~v~~v~--------~D~~d~~~   66 (292)
                      ++|.|+| +|.+|+.++..|.++|++|++++++     +++.+.....    .   ..+.....        ..+.-.++
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d   77 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDIS-----DEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTD   77 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCC
Confidence            7899999 6999999999999999999999998     4333222111    0   00000000        01111123


Q ss_pred             HHHHHccCCEEEEcCcCCCchhHHHHHHHHHH
Q 039623           67 LIKAIKQVDVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        67 ~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      +.++++++|.||.++... ....+.+++...+
T Consensus        78 ~~~a~~~aDlVieavpe~-~~~k~~~~~~l~~  108 (287)
T PRK08293         78 LAEAVKDADLVIEAVPED-PEIKGDFYEELAK  108 (287)
T ss_pred             HHHHhcCCCEEEEeccCC-HHHHHHHHHHHHh
Confidence            556788999999988744 3444555554443

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.93  E-value=0.0061  Score=52.52  Aligned_cols=96  Identities=13%  Similarity=0.074  Sum_probs=58.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-------CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-------PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~   74 (292)
                      .||.|+||+|.+|++++-.|...|.       ++..++++.... ..+... .++.+..... ..+..-.....+.++++
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~-~a~g~a-~Dl~~~~~~~-~~~~~i~~~~~~~~~da   80 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMK-ALEGVA-MELEDCAFPL-LAGVVATTDPEEAFKDV   80 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCccc-ccchHH-HHHhhccccc-cCCcEEecChHHHhCCC
Confidence            4799999999999999999988873       688888863210 011111 1121111000 00110001223567899


Q ss_pred             CEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           75 DVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        75 d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      |+||.+||...             ....+.+.+.+.+++
T Consensus        81 DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  119 (323)
T TIGR01759        81 DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA  119 (323)
T ss_pred             CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999865             445666777777765

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.92  E-value=0.011  Score=50.78  Aligned_cols=90  Identities=18%  Similarity=0.214  Sum_probs=57.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      +||.|+|+ |.+|+.++-.|...|.  ++..++++.... ....-.+++...  .++.+..+   +   + +.++++|+|
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~-~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~adiv   77 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKA-EGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKDADLV   77 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchh-HHHHHHHHhhccccCCeEEEeC---C---H-HHhCCCCEE
Confidence            47999997 9999999999999885  799999873322 111111122111  22333221   2   2 347899999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      |.++|...             ....+.+++.+.+++
T Consensus        78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~  113 (315)
T PRK00066         78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG  113 (315)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999855             344566666666665

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.92  E-value=0.0038  Score=52.52  Aligned_cols=82  Identities=26%  Similarity=0.262  Sum_probs=49.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC--CCCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA--GHPTFAL-VRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++|.|.| .|.||+.+++.|.+.  ++++.++ +|+     +++.+.+...  .+....   ..+   +.+++.++|+|+
T Consensus         7 irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~-----~~~a~~~a~~--~g~~~~---~~~---~eell~~~D~Vv   72 (271)
T PRK13302          7 LRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRD-----PQRHADFIWG--LRRPPP---VVP---LDQLATHADIVV   72 (271)
T ss_pred             eEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCC-----HHHHHHHHHh--cCCCcc---cCC---HHHHhcCCCEEE
Confidence            6899999 799999999999874  6887755 444     4444332221  111111   123   344567789999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      -|++...   ...+...+.++|
T Consensus        73 i~tp~~~---h~e~~~~aL~aG   91 (271)
T PRK13302         73 EAAPASV---LRAIVEPVLAAG   91 (271)
T ss_pred             ECCCcHH---HHHHHHHHHHcC
Confidence            8887542   344444444444

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.88  E-value=0.0035  Score=53.04  Aligned_cols=76  Identities=20%  Similarity=0.145  Sum_probs=51.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++++|+| +|..|+.++..|.+.|. +|+++.|+     .+|.+.+............  +...+++...+.++|+|||+
T Consensus       126 k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt-----~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVIna  197 (282)
T TIGR01809       126 FRGLVIG-AGGTSRAAVYALASLGVTDITVINRN-----PDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVST  197 (282)
T ss_pred             ceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCC-----HHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEEC
Confidence            4799999 58899999999999995 79999998     6676555433222111111  11223344556789999999


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .+...
T Consensus       198 Tp~g~  202 (282)
T TIGR01809       198 VPADV  202 (282)
T ss_pred             CCCCC
Confidence            87653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.88  E-value=0.0058  Score=52.45  Aligned_cols=86  Identities=20%  Similarity=0.311  Sum_probs=62.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      .+|+|+|+ |.+|..-++.+.+.|.+|++++|+     ++|.+..+++   +.+.+...- |++....+-+.+|+||.++
T Consensus       168 ~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~-----~~K~e~a~~l---GAd~~i~~~-~~~~~~~~~~~~d~ii~tv  237 (339)
T COG1064         168 KWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRS-----EEKLELAKKL---GADHVINSS-DSDALEAVKEIADAIIDTV  237 (339)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCC-----hHHHHHHHHh---CCcEEEEcC-CchhhHHhHhhCcEEEECC
Confidence            37999996 579999999999999999999999     7777555544   444444433 6666655555699999999


Q ss_pred             cCCCchhHHHHHHHHHHhC
Q 039623           82 SRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~  100 (292)
                      + .  ......+++++..|
T Consensus       238 ~-~--~~~~~~l~~l~~~G  253 (339)
T COG1064         238 G-P--ATLEPSLKALRRGG  253 (339)
T ss_pred             C-h--hhHHHHHHHHhcCC
Confidence            9 3  34455556666555

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.87  E-value=0.0019  Score=54.71  Aligned_cols=68  Identities=24%  Similarity=0.301  Sum_probs=46.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|.| .|.+|..++..|.+.|++|.+.+|+     +++.+...   ..+...  ....+   . +.++++|+||.+.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~-----~~~~~~a~---~~g~~~--~~~~~---~-~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRR-----ESTCERAI---ERGLVD--EASTD---L-SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HCCCcc--cccCC---H-hHhcCCCEEEEcC
Confidence            5899999 7999999999999999999999997     44443222   222210  00011   1 2457889999887


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      ...
T Consensus        66 p~~   68 (279)
T PRK07417         66 PIG   68 (279)
T ss_pred             CHH
Confidence            744

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.87  E-value=0.0061  Score=49.92  Aligned_cols=100  Identities=19%  Similarity=0.126  Sum_probs=64.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC--------------CCcchhhHhhh---hcC--CcEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS--------------DPVKGKLIEIF---KNL--GVNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~~---~~~--~v~~v~~D~   61 (292)
                      ++|+|.| .|.+|+++++.|...|. ++++++.+.-..              -..|.+.+...   .++  +++.+..++
T Consensus        22 ~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i  100 (228)
T cd00757          22 ARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL  100 (228)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee
Confidence            4799999 68899999999999995 666665432110              01122222111   122  355555555


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                       +.+.+.+.++++|+||.|....  .....+.+.|.+++ ++.+.
T Consensus       101 -~~~~~~~~~~~~DvVi~~~d~~--~~r~~l~~~~~~~~-ip~i~  141 (228)
T cd00757         101 -DAENAEELIAGYDLVLDCTDNF--ATRYLINDACVKLG-KPLVS  141 (228)
T ss_pred             -CHHHHHHHHhCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence             4566778888999999987754  44566778888887 55444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.86  E-value=0.0052  Score=44.94  Aligned_cols=74  Identities=23%  Similarity=0.330  Sum_probs=45.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhC-CCCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEE-ECCCCCHHHHHHHHccCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKA-GHPTFAL-VRESTASDPVKGKLIEIFKNLGVNVL-YGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||.|+|++|.+|..+++.|.+. ++++.++ +|+.     ++.+.+... ..++..+ ..++ +.+.+.  ..++|+||.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~-----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~--~~~~DvV~~   71 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASAR-----SAGKRVSEA-GPHLKGEVVLEL-EPEDFE--ELAVDIVFL   71 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechh-----hcCcCHHHH-Cccccccccccc-ccCChh--hcCCCEEEE
Confidence            6899999999999999999995 7888888 4431     111111211 2222212 1222 222232  258899999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      |.+...
T Consensus        72 ~~~~~~   77 (122)
T smart00859       72 ALPHGV   77 (122)
T ss_pred             cCCcHH
Confidence            888664

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.85  E-value=0.0055  Score=53.34  Aligned_cols=74  Identities=24%  Similarity=0.358  Sum_probs=51.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc----cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK----QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~v   77 (292)
                      +.|||.||+|.+|+..++.+...|..+++..++     .++.+.++.+   +... ..|+.+++......+    ++|+|
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s-----~e~~~l~k~l---GAd~-vvdy~~~~~~e~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS-----KEKLELVKKL---GADE-VVDYKDENVVELIKKYTGKGVDVV  229 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc-----cchHHHHHHc---CCcE-eecCCCHHHHHHHHhhcCCCccEE
Confidence            369999999999999999999999555555555     5555544443   3322 456666554444433    59999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      +.|+|..
T Consensus       230 lD~vg~~  236 (347)
T KOG1198|consen  230 LDCVGGS  236 (347)
T ss_pred             EECCCCC
Confidence            9999975

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=96.84  E-value=0.0053  Score=55.80  Aligned_cols=40  Identities=15%  Similarity=0.196  Sum_probs=34.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI   46 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~   46 (292)
                      |++|.++| .|.+|+.+++.|+++||+|.+.+|+     +++.+.+
T Consensus         6 ~~~IG~IG-LG~MG~~mA~nL~~~G~~V~V~NRt-----~~k~~~l   45 (493)
T PLN02350          6 LSRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT-----TSKVDET   45 (493)
T ss_pred             CCCEEEEe-eHHHHHHHHHHHHhCCCeEEEECCC-----HHHHHHH
Confidence            46899999 8999999999999999999999998     5555443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.84  E-value=0.023  Score=50.67  Aligned_cols=65  Identities=15%  Similarity=0.225  Sum_probs=46.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| .|.+|+.+++.|...|.+|++.+++     +.+....   ...+.++.     +   +.++++++|+||.+.
T Consensus       213 k~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~d-----p~ra~~A---~~~G~~v~-----~---l~eal~~aDVVI~aT  275 (425)
T PRK05476        213 KVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVD-----PICALQA---AMDGFRVM-----T---MEEAAELGDIFVTAT  275 (425)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCC-----chhhHHH---HhcCCEec-----C---HHHHHhCCCEEEECC
Confidence            5799999 6999999999999999999999987     4333111   12243322     2   345677999999987


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      |.
T Consensus       276 G~  277 (425)
T PRK05476        276 GN  277 (425)
T ss_pred             CC
Confidence            64

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.84  E-value=0.019  Score=45.90  Aligned_cols=103  Identities=26%  Similarity=0.321  Sum_probs=64.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC-C-------------Ccchhh----HhhhhcCC--cEEEECC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS-D-------------PVKGKL----IEIFKNLG--VNVLYGD   60 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-~-------------~~~~~~----~~~~~~~~--v~~v~~D   60 (292)
                      ++|+|.|+.| +|+++++.|...|. +++.++.+.-.. +             ..|.+.    ++.+ ++.  ++.+...
T Consensus        22 s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i~~~~~~   99 (197)
T cd01492          22 ARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKVSVDTDD   99 (197)
T ss_pred             CcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEEEEEecC
Confidence            4799999655 99999999999995 677777552211 0             111111    2222 333  4445555


Q ss_pred             CCCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccCCC
Q 039623           61 LQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFG  111 (292)
Q Consensus        61 ~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g  111 (292)
                      +.+  ...+.++++|+||.+...  ......+-+.|++.+ ++.+..+..|
T Consensus       100 ~~~--~~~~~~~~~dvVi~~~~~--~~~~~~ln~~c~~~~-ip~i~~~~~G  145 (197)
T cd01492         100 ISE--KPEEFFSQFDVVVATELS--RAELVKINELCRKLG-VKFYATGVHG  145 (197)
T ss_pred             ccc--cHHHHHhCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEEEEecC
Confidence            542  234567899999987653  456677788899988 6654444433

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.83  E-value=0.0043  Score=52.16  Aligned_cols=72  Identities=19%  Similarity=0.202  Sum_probs=48.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEE-ECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVL-YGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++++|.| +|..+++++..|++.| .+|+++.|+     .+|.+.+..........+ ..++.+.+...    .+|+|||
T Consensus       127 ~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt-----~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliIN  196 (283)
T COG0169         127 KRVLILG-AGGAARAVAFALAEAGAKRITVVNRT-----RERAEELADLFGELGAAVEAAALADLEGLE----EADLLIN  196 (283)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhhhccccccccccccccccc----ccCEEEE
Confidence            4699999 5779999999999999 589999999     777766655433222121 22222222221    6799999


Q ss_pred             cCcC
Q 039623           80 TVSR   83 (292)
Q Consensus        80 ~a~~   83 (292)
                      +.+.
T Consensus       197 aTp~  200 (283)
T COG0169         197 ATPV  200 (283)
T ss_pred             CCCC
Confidence            8654

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.82  E-value=0.003  Score=53.71  Aligned_cols=87  Identities=20%  Similarity=0.284  Sum_probs=61.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC-----CCCCHHHHHHHHccCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG-----DLQDHESLIKAIKQVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~-----D~~d~~~~~~~~~~~d   75 (292)
                      ||+|.|+| +|-=|++|++.|.++||+|+.-.|+     ++-.+.+..- +.|..+..+     .+.-..++.++++++|
T Consensus         1 ~~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~-----~~~~~~i~~~-~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad   73 (329)
T COG0240           1 MMKIAVIG-AGSWGTALAKVLARNGHEVRLWGRD-----EEIVAEINET-RENPKYLPGILLPPNLKATTDLAEALDGAD   73 (329)
T ss_pred             CceEEEEc-CChHHHHHHHHHHhcCCeeEEEecC-----HHHHHHHHhc-CcCccccCCccCCcccccccCHHHHHhcCC
Confidence            78999999 6899999999999999999999998     5544333332 334444442     2222356788888999


Q ss_pred             EEEEcCcCCCchhHHHHHHHHH
Q 039623           76 VVISTVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~   97 (292)
                      .|+...+.   +....+++..+
T Consensus        74 ~iv~avPs---~~~r~v~~~l~   92 (329)
T COG0240          74 IIVIAVPS---QALREVLRQLK   92 (329)
T ss_pred             EEEEECCh---HHHHHHHHHHh
Confidence            99987663   44445555443

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.81  E-value=0.004  Score=53.79  Aligned_cols=83  Identities=23%  Similarity=0.287  Sum_probs=50.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++|.|.||||++|..|++.|.++.|   ++..+....+.  ..+..    +....+.+.  ++   +.  ..+.++|++|
T Consensus         5 ~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa--G~~~~----~~~~~~~v~--~~---~~--~~~~~~Dvvf   71 (336)
T PRK08040          5 WNIALLGATGAVGEALLELLAERQFPVGELYALASEESA--GETLR----FGGKSVTVQ--DA---AE--FDWSQAQLAF   71 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC--CceEE----ECCcceEEE--eC---ch--hhccCCCEEE
Confidence            5899999999999999999998543   56666443221  11111    111122222  32   11  1236789999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+++..   ....++..+.++|
T Consensus        72 ~a~p~~---~s~~~~~~~~~~g   90 (336)
T PRK08040         72 FVAGRE---ASAAYAEEATNAG   90 (336)
T ss_pred             ECCCHH---HHHHHHHHHHHCC
Confidence            988743   5666666666666

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.81  E-value=0.011  Score=53.88  Aligned_cols=90  Identities=22%  Similarity=0.320  Sum_probs=62.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| .|..|..+++.|.+.|++|++.++++...   .......+...++.++.++-. ++    .+.++|.||...
T Consensus        15 ~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~---~~~~~~~l~~~gi~~~~~~~~-~~----~~~~~dlVV~Sp   85 (458)
T PRK01710         15 KKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEE---LGEVSNELKELGVKLVLGENY-LD----KLDGFDVIFKTP   85 (458)
T ss_pred             CeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCcc---chHHHHHHHhCCCEEEeCCCC-hH----HhccCCEEEECC
Confidence            5799999 68899999999999999999999874321   111123344568888877542 22    246789999976


Q ss_pred             cCCCchhHHHHHHHHHHhCCcce
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVKR  104 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~~  104 (292)
                      |..   .....+.++++.+ ++.
T Consensus        86 gi~---~~~p~~~~a~~~~-i~i  104 (458)
T PRK01710         86 SMR---IDSPELVKAKEEG-AYI  104 (458)
T ss_pred             CCC---CCchHHHHHHHcC-CcE
Confidence            644   3456777777777 553

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.80  E-value=0.021  Score=47.27  Aligned_cols=100  Identities=16%  Similarity=0.126  Sum_probs=64.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCC--------------CcchhhHhh-h--hcCC--cEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASD--------------PVKGKLIEI-F--KNLG--VNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~~~~~~~~~-~--~~~~--v~~v~~D~   61 (292)
                      ++|+|.|+ |.+|+.+++.|...|. ++++++.+.-..+              ..|.+.+.. +  .++.  ++.+...+
T Consensus        33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i  111 (245)
T PRK05690         33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL  111 (245)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            47999996 8899999999999994 6777765522110              112222111 1  1233  45555555


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      + .+.+.+.++++|+||.+....  ..-..+-++|.+++ ++.+.
T Consensus       112 ~-~~~~~~~~~~~DiVi~~~D~~--~~r~~ln~~~~~~~-ip~v~  152 (245)
T PRK05690        112 D-DDELAALIAGHDLVLDCTDNV--ATRNQLNRACFAAK-KPLVS  152 (245)
T ss_pred             C-HHHHHHHHhcCCEEEecCCCH--HHHHHHHHHHHHhC-CEEEE
Confidence            3 456677889999999987643  44556778888887 55443

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.80  E-value=0.0024  Score=54.88  Aligned_cols=32  Identities=22%  Similarity=0.343  Sum_probs=30.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+|.|.| +|.+|+.+++.|.+.||+|++.+|+
T Consensus         5 m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~   36 (308)
T PRK14619          5 KTIAILG-AGAWGSTLAGLASANGHRVRVWSRR   36 (308)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            6899999 7999999999999999999999997

>PRK05442 malate dehydrogenase; Provisional

Probab=96.79  E-value=0.0074  Score=52.06  Aligned_cols=92  Identities=16%  Similarity=0.028  Sum_probs=56.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-C------CEEEEecCCCCC-CCcchhhHhhhh---cCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-H------PTFALVRESTAS-DPVKGKLIEIFK---NLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~------~V~~~~r~~~~~-~~~~~~~~~~~~---~~~v~~v~~D~~d~~~~~~~   70 (292)
                      +||.|+||+|.+|+.++-.|...| .      ++..++++.... .....-.+.+..   ..++.+ ..      ...+.
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~------~~y~~   77 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD------DPNVA   77 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec------ChHHH
Confidence            689999999999999999988876 2      588888853210 011111111111   112222 11      12356


Q ss_pred             HccCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           71 IKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++++|+||.+||...             ....+.+.+.+.++.
T Consensus        78 ~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  120 (326)
T PRK05442         78 FKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA  120 (326)
T ss_pred             hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            789999999999755             344666666666643

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.79  E-value=0.0043  Score=52.85  Aligned_cols=86  Identities=20%  Similarity=0.220  Sum_probs=51.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCC---EEEEecCCCCCCCcch-hhHhhhhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHP---TFALVRESTASDPVKG-KLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~-~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |++|.|.||||.+|+.+++.|.++.+.   +..+...++   ..+. ..+   .... ..+.-+..|..    .++++|+
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rS---aG~~~~~f---~~~~-~~v~~~~~~~~----~~~~~Di   69 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARS---AGKKYIEF---GGKS-IGVPEDAADEF----VFSDVDI   69 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccc---cCCccccc---cCcc-ccCcccccccc----ccccCCE
Confidence            689999999999999999999997643   333332221   1111 000   0111 11111222222    2338999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhC
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +|.++|..   .++.+...+.++|
T Consensus        70 vf~~ag~~---~s~~~~p~~~~~G   90 (334)
T COG0136          70 VFFAAGGS---VSKEVEPKAAEAG   90 (334)
T ss_pred             EEEeCchH---HHHHHHHHHHHcC
Confidence            99999843   4578888888887

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.78  E-value=0.0081  Score=53.85  Aligned_cols=82  Identities=18%  Similarity=0.257  Sum_probs=56.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|..+++.|...| .+|++.+|+     .++...+...  .+...+     +.+++.+.+.++|+||.+
T Consensus       181 ~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs-----~~ra~~la~~--~g~~~i-----~~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       181 KKALLIGA-GEMGELVAKHLLRKGVGKILIANRT-----YERAEDLAKE--LGGEAV-----KFEDLEEYLAEADIVISS  247 (417)
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHH--cCCeEe-----eHHHHHHHHhhCCEEEEC
Confidence            47999995 999999999999999 789999998     5554333221  122222     234667788899999999


Q ss_pred             CcCCCchhHHHHHHHH
Q 039623           81 VSRGQIPEQAKIIAAV   96 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~   96 (292)
                      .+..........++.+
T Consensus       248 T~s~~~ii~~e~l~~~  263 (417)
T TIGR01035       248 TGAPHPIVSKEDVERA  263 (417)
T ss_pred             CCCCCceEcHHHHHHH
Confidence            8876622333444443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.78  E-value=0.024  Score=44.28  Aligned_cols=99  Identities=12%  Similarity=0.107  Sum_probs=62.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCC---CC----------CcchhhHhh-h--hcCC--cEEEECCCCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTA---SD----------PVKGKLIEI-F--KNLG--VNVLYGDLQD   63 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~----------~~~~~~~~~-~--~~~~--v~~v~~D~~d   63 (292)
                      +|+|.| .|.+|+.+++.|...|. +++.++.+.-.   ..          ..|.+.... +  .++.  ++.+...+. 
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            689999 58899999999999996 58888876311   00          112222111 1  1233  444555553 


Q ss_pred             HHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHh-CCcceee
Q 039623           64 HESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEA-GNVKRFL  106 (292)
Q Consensus        64 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~-~~~~~~i  106 (292)
                      .+.+.+.++++|+||.+...  ...-..+.+.+.+. + ++.+.
T Consensus        79 ~~~~~~~l~~~DlVi~~~d~--~~~r~~i~~~~~~~~~-ip~i~  119 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFDN--AETKAMLAESLLGNKN-KPVVC  119 (174)
T ss_pred             hhhHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHHCC-CCEEE
Confidence            35577788999999998443  23445577777776 5 55444

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.77  E-value=0.002  Score=57.75  Aligned_cols=32  Identities=22%  Similarity=0.399  Sum_probs=30.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+|.|.| .|++|..++..|.+.||+|++++++
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~   32 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDID   32 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECC
Confidence            5899999 7999999999999999999999998

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.77  E-value=0.0026  Score=53.42  Aligned_cols=80  Identities=21%  Similarity=0.280  Sum_probs=53.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC---CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG---HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ||+|.|+| .|.+|..+++.|.+.|   ++|.+.+|+     +++.+.+...  .++...    .+   ..+++..+|+|
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~-----~~~~~~~~~~--~g~~~~----~~---~~~~~~~advV   66 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPS-----PEKRAALAEE--YGVRAA----TD---NQEAAQEADVV   66 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCC-----HHHHHHHHHh--cCCeec----CC---hHHHHhcCCEE
Confidence            68899999 6999999999999998   789999998     5444333221  133221    12   23446789999


Q ss_pred             EEcCcCCCchhHHHHHHHHHH
Q 039623           78 ISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~   98 (292)
                      |.+..+.   ....+++.+..
T Consensus        67 il~v~~~---~~~~v~~~l~~   84 (267)
T PRK11880         67 VLAVKPQ---VMEEVLSELKG   84 (267)
T ss_pred             EEEcCHH---HHHHHHHHHHh
Confidence            9877533   34455555443

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.77  E-value=0.0044  Score=55.64  Aligned_cols=71  Identities=20%  Similarity=0.256  Sum_probs=52.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+| +|-+|+.+++.|...|. +|++.+|+     +++.+.+....  +.     +..+.+++.+.+.++|+||.+
T Consensus       183 ~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~-----~~ra~~la~~~--g~-----~~~~~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        183 KKVLVIG-AGEMGELVAKHLAEKGVRKITVANRT-----LERAEELAEEF--GG-----EAIPLDELPEALAEADIVISS  249 (423)
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHHHc--CC-----cEeeHHHHHHHhccCCEEEEC
Confidence            5799999 59999999999999996 79999998     55554333221  22     222345566778899999999


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .+...
T Consensus       250 T~s~~  254 (423)
T PRK00045        250 TGAPH  254 (423)
T ss_pred             CCCCC
Confidence            98766

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=96.76  E-value=0.0037  Score=54.50  Aligned_cols=33  Identities=27%  Similarity=0.309  Sum_probs=31.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ||+|.|.| +|.+|..++..|.+.|++|++++|+
T Consensus         2 ~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~   34 (341)
T PRK08229          2 MARICVLG-AGSIGCYLGGRLAAAGADVTLIGRA   34 (341)
T ss_pred             CceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecH
Confidence            57899999 7999999999999999999999986

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.75  E-value=0.012  Score=50.57  Aligned_cols=66  Identities=23%  Similarity=0.318  Sum_probs=48.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|.|.| .|.||+.+++.|..-|++|.+.+|.....             .++...    ...+++.++++++|+|+.+.
T Consensus       137 ~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~-------------~~~~~~----~~~~~l~e~l~~aDvvv~~l  198 (312)
T PRK15469        137 FTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW-------------PGVQSF----AGREELSAFLSQTRVLINLL  198 (312)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC-------------CCceee----cccccHHHHHhcCCEEEECC
Confidence            5899999 89999999999999999999998863211             111111    12346778888888888887


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus       199 Plt~  202 (312)
T PRK15469        199 PNTP  202 (312)
T ss_pred             CCCH
Confidence            7664

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.75  E-value=0.0053  Score=52.79  Aligned_cols=90  Identities=12%  Similarity=0.190  Sum_probs=56.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH--------hhhhcCCcE--EEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI--------EIFKNLGVN--VLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~v~--~v~~D~~d~~~~~~~~   71 (292)
                      ++|.|+| +|.+|+.++..|+..|++|++.+++     ++..+..        +.+...+..  .....+.-..++.+++
T Consensus         8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av   81 (321)
T PRK07066          8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPA-----PGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACV   81 (321)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHh
Confidence            6899999 6999999999999999999999998     3332211        111111110  0011112123466788


Q ss_pred             ccCCEEEEcCcCCCchhHHHHHHHHHH
Q 039623           72 KQVDVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        72 ~~~d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      +++|.|+-++.... ..-+.+...+.+
T Consensus        82 ~~aDlViEavpE~l-~vK~~lf~~l~~  107 (321)
T PRK07066         82 ADADFIQESAPERE-ALKLELHERISR  107 (321)
T ss_pred             cCCCEEEECCcCCH-HHHHHHHHHHHH
Confidence            89999999877553 444444444433

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.74  E-value=0.0068  Score=51.45  Aligned_cols=74  Identities=16%  Similarity=0.229  Sum_probs=49.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ||.|.|||||.|..|++.|.++. .++..+.-++.                      .+..+   ..++++++|++|.+.
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------------~~~~~---~~~~~~~~D~vFlal   57 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------------KDAAE---RAKLLNAADVAILCL   57 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------------cCcCC---HhHhhcCCCEEEECC
Confidence            79999999999999999999985 46666543310                      11112   235567899999888


Q ss_pred             cCCCchhHHHHHHHHHHhCCcceee
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +..   ....++..+.+.| + ++|
T Consensus        58 p~~---~s~~~~~~~~~~g-~-~VI   77 (310)
T TIGR01851        58 PDD---AAREAVSLVDNPN-T-CII   77 (310)
T ss_pred             CHH---HHHHHHHHHHhCC-C-EEE
Confidence            643   4555555555556 4 344

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.73  E-value=0.0024  Score=57.11  Aligned_cols=39  Identities=18%  Similarity=0.200  Sum_probs=34.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL   45 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~   45 (292)
                      ||+|.|.| .|++|..++..|.++||+|++++++     +++.+.
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~-----~~~v~~   41 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDIN-----QHAVDT   41 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCC-----HHHHHH
Confidence            47899999 7999999999999999999999998     555543

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=96.72  E-value=0.012  Score=51.29  Aligned_cols=34  Identities=32%  Similarity=0.449  Sum_probs=29.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~   34 (292)
                      |++|.|+|+||-||++.+.-+.+.  .++|.+++-.
T Consensus         1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~   36 (389)
T TIGR00243         1 MKQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAG   36 (389)
T ss_pred             CceEEEEecChHHHHHHHHHHHhCccccEEEEEEcC
Confidence            889999999999999999887764  4899998765

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.71  E-value=0.011  Score=52.24  Aligned_cols=84  Identities=24%  Similarity=0.308  Sum_probs=63.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      +++||+| .|-+|.-+++.|.++| .+|++..|+     .++...+..-.  +     +.....+.+.+.+..+|+||.+
T Consensus       179 ~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT-----~erA~~La~~~--~-----~~~~~l~el~~~l~~~DvViss  245 (414)
T COG0373         179 KKVLVIG-AGEMGELVAKHLAEKGVKKITIANRT-----LERAEELAKKL--G-----AEAVALEELLEALAEADVVISS  245 (414)
T ss_pred             CeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCC-----HHHHHHHHHHh--C-----CeeecHHHHHHhhhhCCEEEEe
Confidence            4799999 5999999999999999 688999998     77775554422  2     5555666788889999999999


Q ss_pred             CcCCC-chhHHHHHHHHHH
Q 039623           81 VSRGQ-IPEQAKIIAAVKE   98 (292)
Q Consensus        81 a~~~~-~~~~~~l~~a~~~   98 (292)
                      .+... +.....+-++.+.
T Consensus       246 Tsa~~~ii~~~~ve~a~~~  264 (414)
T COG0373         246 TSAPHPIITREMVERALKI  264 (414)
T ss_pred             cCCCccccCHHHHHHHHhc
Confidence            88777 4444444444443

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.71  E-value=0.0063  Score=52.68  Aligned_cols=83  Identities=19%  Similarity=0.254  Sum_probs=51.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCC---EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHP---TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ++|.|.||||++|+.+++.|.++ .++   +..+....+   ..+.-   .+....+.+...   |++.    +.++|++
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~s---aGk~~---~~~~~~l~v~~~---~~~~----~~~~Div   72 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRS---AGKTV---QFKGREIIIQEA---KINS----FEGVDIA   72 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECccc---CCCCe---eeCCcceEEEeC---CHHH----hcCCCEE
Confidence            48999999999999999999864 566   555544322   11110   111222333322   3332    3679999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      |.+++..   ..+.+...+.++|
T Consensus        73 f~a~~~~---~s~~~~~~~~~~G   92 (347)
T PRK06728         73 FFSAGGE---VSRQFVNQAVSSG   92 (347)
T ss_pred             EECCChH---HHHHHHHHHHHCC
Confidence            9988643   5666776666666

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.70  E-value=0.0097  Score=52.63  Aligned_cols=102  Identities=18%  Similarity=0.161  Sum_probs=65.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC--------------CCcchhhHhh-h--hcCCc--EEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS--------------DPVKGKLIEI-F--KNLGV--NVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~-~--~~~~v--~~v~~D~   61 (292)
                      ++|+|.| .|.+|+.+++.|...|. ++++++++.-..              -..|.+.+.. +  .++.+  +.+...+
T Consensus       136 ~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~  214 (376)
T PRK08762        136 ARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV  214 (376)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            4799998 58899999999999996 788888762100              0123322222 1  12333  4444444


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      . .+.+.++++++|+||++....  ..-..+-++|.+.+ ++.+.-+
T Consensus       215 ~-~~~~~~~~~~~D~Vv~~~d~~--~~r~~ln~~~~~~~-ip~i~~~  257 (376)
T PRK08762        215 T-SDNVEALLQDVDVVVDGADNF--PTRYLLNDACVKLG-KPLVYGA  257 (376)
T ss_pred             C-hHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEEEE
Confidence            3 456777888999999988754  33445778888887 6554433

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.69  E-value=0.002  Score=50.92  Aligned_cols=78  Identities=24%  Similarity=0.342  Sum_probs=41.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc----CCcE-----EE-ECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN----LGVN-----VL-YGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~v~-----~v-~~D~~d~~~~~~~~   71 (292)
                      |||.|.| .||+|..++..|.+.||+|++++.+     +++.+.+..-..    ++++     .+ .+.+.-.+++.+++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~-----~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai   74 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDID-----EEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAI   74 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S------HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCC-----hHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhh
Confidence            7999998 8999999999999999999999998     555544432110    0000     00 00111011233445


Q ss_pred             ccCCEEEEcCcCCC
Q 039623           72 KQVDVVISTVSRGQ   85 (292)
Q Consensus        72 ~~~d~vi~~a~~~~   85 (292)
                      .++|++|-|.+-+.
T Consensus        75 ~~adv~~I~VpTP~   88 (185)
T PF03721_consen   75 KDADVVFICVPTPS   88 (185)
T ss_dssp             HH-SEEEE----EB
T ss_pred             hccceEEEecCCCc
Confidence            57899999987544

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PLN02928 oxidoreductase family protein

Probab=96.69  E-value=0.013  Score=51.04  Aligned_cols=79  Identities=20%  Similarity=0.232  Sum_probs=49.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|.|.| .|-||+.+++.|..-|.+|.+.+|+....   ....+. +....+..+.......+++.++++.+|+|+.+.
T Consensus       160 ktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        160 KTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSE---PEDGLL-IPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChh---hhhhhc-cccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            5799999 79999999999999999999998863211   000000 000111111111113446778888899998887


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +.+.
T Consensus       235 Plt~  238 (347)
T PLN02928        235 TLTK  238 (347)
T ss_pred             CCCh
Confidence            7654

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.68  E-value=0.0029  Score=57.32  Aligned_cols=76  Identities=17%  Similarity=0.210  Sum_probs=49.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhh----cCCcEEE----ECC-CCCHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFK----NLGVNVL----YGD-LQDHESLIK   69 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~----~~~v~~v----~~D-~~d~~~~~~   69 (292)
                      ||+|.|.| .|++|..++..|.+.|  ++|++++.+     ++|.+.+..-.    .++.+-+    .+. +.--+++.+
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~-----~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~   74 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDIS-----VPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEK   74 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECC-----HHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHH
Confidence            89999998 8999999999999885  789999998     66664443210    0111000    010 111122345


Q ss_pred             HHccCCEEEEcCc
Q 039623           70 AIKQVDVVISTVS   82 (292)
Q Consensus        70 ~~~~~d~vi~~a~   82 (292)
                      ++.++|++|-|.+
T Consensus        75 ~i~~advi~I~V~   87 (473)
T PLN02353         75 HVAEADIVFVSVN   87 (473)
T ss_pred             HHhcCCEEEEEeC
Confidence            6678999999986

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.66  E-value=0.0033  Score=53.50  Aligned_cols=66  Identities=21%  Similarity=0.241  Sum_probs=47.2

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      +|.|+| .|.+|+.+++.|.+.|++|++.+|+     +++.+.+.   ..+...       .++..++++++|+||.+.+
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~-----~~~~~~~~---~~g~~~-------~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIG-----PEVADELL---AAGAVT-------AETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHH---HCCCcc-------cCCHHHHHhcCCEEEEecC
Confidence            588998 7999999999999999999999998     55554332   222211       1124456678888888876


Q ss_pred             CC
Q 039623           83 RG   84 (292)
Q Consensus        83 ~~   84 (292)
                      ..
T Consensus        65 ~~   66 (291)
T TIGR01505        65 DS   66 (291)
T ss_pred             CH
Confidence            43

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.64  E-value=0.0018  Score=55.76  Aligned_cols=78  Identities=21%  Similarity=0.236  Sum_probs=49.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--------hcCCcE-EEECCCCCHHHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--------KNLGVN-VLYGDLQDHESLIKAI   71 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~v~-~v~~D~~d~~~~~~~~   71 (292)
                      |++|.|+| .|.+|..++..|.+.|++|++++++     +++.+.+...        ...+.. .....+.-.++..+++
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   77 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVM-----EGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAV   77 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHh
Confidence            36899999 6999999999999999999999987     4443332221        000000 0000011112244567


Q ss_pred             ccCCEEEEcCcCC
Q 039623           72 KQVDVVISTVSRG   84 (292)
Q Consensus        72 ~~~d~vi~~a~~~   84 (292)
                      +++|+||-+....
T Consensus        78 ~~aDlVi~av~~~   90 (311)
T PRK06130         78 SGADLVIEAVPEK   90 (311)
T ss_pred             ccCCEEEEeccCc
Confidence            7899999987654

>PLN00203 glutamyl-tRNA reductase

Probab=96.64  E-value=0.0079  Score=55.12  Aligned_cols=85  Identities=20%  Similarity=0.288  Sum_probs=58.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|+.+++.|...|. +|+++.|+     .++.+.+..... +..+...   ..+++.+++.++|+||.+
T Consensus       267 kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs-----~era~~La~~~~-g~~i~~~---~~~dl~~al~~aDVVIsA  336 (519)
T PLN00203        267 ARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRS-----EERVAALREEFP-DVEIIYK---PLDEMLACAAEADVVFTS  336 (519)
T ss_pred             CEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCC-----HHHHHHHHHHhC-CCceEee---cHhhHHHHHhcCCEEEEc
Confidence            57999995 9999999999999996 79999998     666655443221 3322222   334556778899999999


Q ss_pred             CcCCCchhHHHHHHHH
Q 039623           81 VSRGQIPEQAKIIAAV   96 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~   96 (292)
                      .+..........++.+
T Consensus       337 T~s~~pvI~~e~l~~~  352 (519)
T PLN00203        337 TSSETPLFLKEHVEAL  352 (519)
T ss_pred             cCCCCCeeCHHHHHHh
Confidence            8766633344455544

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.64  E-value=0.016  Score=52.82  Aligned_cols=91  Identities=18%  Similarity=0.193  Sum_probs=64.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      +|+|.| .|-.|...++.|.+.|++|.+.+++....   .......+...++++..+.-.+.+.+...+.++|.|+...|
T Consensus         2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~~~~~~---~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~g   77 (459)
T PRK02705          2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDRNDSPE---LLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPG   77 (459)
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCchh---hHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCC
Confidence            799999 58899999999999999999999874321   11111234556888887765555555667778999999777


Q ss_pred             CCCchhHHHHHHHHHHhC
Q 039623           83 RGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        83 ~~~~~~~~~l~~a~~~~~  100 (292)
                      ...   ...++.++++.+
T Consensus        78 i~~---~~~~~~~a~~~~   92 (459)
T PRK02705         78 IPW---DHPTLVELRERG   92 (459)
T ss_pred             CCC---CCHHHHHHHHcC
Confidence            543   334555555555

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.63  E-value=0.0071  Score=52.97  Aligned_cols=33  Identities=12%  Similarity=0.080  Sum_probs=29.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~   34 (292)
                      ++|+|.|.+|.||..+++.|.+. +++|+++++.
T Consensus         5 ~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~   38 (370)
T PRK08818          5 PVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA   38 (370)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence            68999999999999999999975 7899998875

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.61  E-value=0.0063  Score=48.71  Aligned_cols=67  Identities=16%  Similarity=0.166  Sum_probs=46.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi~~   80 (292)
                      |+|+|+|. |.+|+++++.|.+.|++|++.+++     +++.+.+...  .+.+.+  |.      .+++. ++|+++.+
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~-----~~~~~~~~~~--~g~~~v--~~------~~l~~~~~Dv~vp~   92 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEEGAKLIVADIN-----EEAVARAAEL--FGATVV--AP------EEIYSVDADVFAPC   92 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHH--cCCEEE--cc------hhhccccCCEEEec
Confidence            68999995 899999999999999999988887     4444332221  133332  21      22333 79999988


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      +...
T Consensus        93 A~~~   96 (200)
T cd01075          93 ALGG   96 (200)
T ss_pred             cccc
Confidence            7643

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.60  E-value=0.025  Score=50.07  Aligned_cols=85  Identities=18%  Similarity=0.186  Sum_probs=62.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEcC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVISTV   81 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~a   81 (292)
                      .++|.| .|-+|+.+++.|.++|.++.+++.+..          +.....+..++.||.+|++.+.++ +++++.|+-+.
T Consensus       242 HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~----------~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t  310 (393)
T PRK10537        242 HFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL----------EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALR  310 (393)
T ss_pred             eEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh----------hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence            488999 689999999999999999998875411          222346788999999999988775 45899999766


Q ss_pred             cCCCchhHHHHHHHHHHhC
Q 039623           82 SRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~  100 (292)
                      ...  .....++..+++.+
T Consensus       311 ~dD--~~Nl~ivL~ar~l~  327 (393)
T PRK10537        311 DND--ADNAFVVLAAKEMS  327 (393)
T ss_pred             CCh--HHHHHHHHHHHHhC
Confidence            543  23334455566665

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.60  E-value=0.011  Score=49.66  Aligned_cols=80  Identities=23%  Similarity=0.288  Sum_probs=50.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHccCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~~~d~v   77 (292)
                      |++|+|.| .|.||+++++.|.++|+.|.++.++.+.     .....        -...++.|.   +.......++|+|
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~-----~~~~~--------a~~lgv~d~~~~~~~~~~~~~aD~V   68 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSA-----ATLKA--------ALELGVIDELTVAGLAEAAAEADLV   68 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcH-----HHHHH--------HhhcCcccccccchhhhhcccCCEE
Confidence            36777777 8999999999999999999888887432     11111        112333332   1123455678999


Q ss_pred             EEcCcCCCchhHHHHHHHHH
Q 039623           78 ISTVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~   97 (292)
                      |.+.+.   ..+..+++...
T Consensus        69 ivavPi---~~~~~~l~~l~   85 (279)
T COG0287          69 IVAVPI---EATEEVLKELA   85 (279)
T ss_pred             EEeccH---HHHHHHHHHhc
Confidence            988774   44444554443

>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]

Probab=96.59  E-value=0.018  Score=49.34  Aligned_cols=34  Identities=29%  Similarity=0.412  Sum_probs=29.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~   34 (292)
                      ||++.|+|+||-||.+...-+.+.+  ++|.+++-.
T Consensus         1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag   36 (385)
T COG0743           1 MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAG   36 (385)
T ss_pred             CceEEEEecCCchhHHHHHHHHhCCCcEEEEEEecC
Confidence            8999999999999999999998886  568887655

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.58  E-value=0.026  Score=45.11  Aligned_cols=102  Identities=19%  Similarity=0.214  Sum_probs=61.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecC---CCCCC----------CcchhhHhh-h--hcC--CcEEEECCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRE---STASD----------PVKGKLIEI-F--KNL--GVNVLYGDLQ   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~----------~~~~~~~~~-~--~~~--~v~~v~~D~~   62 (292)
                      ++|+|.|+ |.+|+.++..|...|. +++.++++   .+...          ..|.+.+.. +  .++  .++.+..+++
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i~  100 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKIT  100 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeCC
Confidence            47999995 7899999999999997 68888877   22111          011111111 1  122  3555556664


Q ss_pred             CHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           63 DHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                       .+.+.++++++|+||.+.-  ....-..+.+.+.+.-+.+.++.
T Consensus       101 -~~~~~~~~~~~DlVi~a~D--n~~~k~~l~~~~~~~~~~~~ii~  142 (200)
T TIGR02354       101 -EENIDKFFKDADIVCEAFD--NAEAKAMLVNAVLEKYKDKYLIA  142 (200)
T ss_pred             -HhHHHHHhcCCCEEEECCC--CHHHHHHHHHHHHHHcCCCcEEE
Confidence             5667788999999999832  22333444555554421334444

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.58  E-value=0.0062  Score=51.39  Aligned_cols=55  Identities=16%  Similarity=0.349  Sum_probs=44.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+|++|.+|+.++..|+++|.+|++..|..                             ..+.+.++++|+||++.
T Consensus       160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------------~~L~~~~~~aDIvI~At  210 (283)
T PRK14192        160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------------QNLPELVKQADIIVGAV  210 (283)
T ss_pred             CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------------hhHHHHhccCCEEEEcc
Confidence            5799999999999999999999999888877641                             12445567899999999


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      |...
T Consensus       211 G~~~  214 (283)
T PRK14192        211 GKPE  214 (283)
T ss_pred             CCCC
Confidence            7544

>PRK08328 hypothetical protein; Provisional

Probab=96.58  E-value=0.039  Score=45.26  Aligned_cols=99  Identities=19%  Similarity=0.263  Sum_probs=63.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC------------CCc---chhh----HhhhhcCC--cEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS------------DPV---KGKL----IEIFKNLG--VNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------------~~~---~~~~----~~~~~~~~--v~~v~~   59 (292)
                      .+|+|.| .|.+|+++++.|...|. ++++++.+.-..            +..   |.+.    ++.+ ++.  ++.+..
T Consensus        28 ~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~v~~~~~  105 (231)
T PRK08328         28 AKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIKIETFVG  105 (231)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCEEEEEec
Confidence            4799999 57899999999999994 677776542110            011   1111    1111 233  445555


Q ss_pred             CCCCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           60 DLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        60 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .+ +.+.+.++++++|+||.+.-..  .....+-++|++.+ ++.+.
T Consensus       106 ~~-~~~~~~~~l~~~D~Vid~~d~~--~~r~~l~~~~~~~~-ip~i~  148 (231)
T PRK08328        106 RL-SEENIDEVLKGVDVIVDCLDNF--ETRYLLDDYAHKKG-IPLVH  148 (231)
T ss_pred             cC-CHHHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence            55 4555777889999999987764  34445667788887 55443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.57  E-value=0.046  Score=44.18  Aligned_cols=100  Identities=18%  Similarity=0.219  Sum_probs=63.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC---C----------CcchhhHhh-h--hcCC--cEEEECCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS---D----------PVKGKLIEI-F--KNLG--VNVLYGDLQ   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~----------~~~~~~~~~-~--~~~~--v~~v~~D~~   62 (292)
                      .+|+|.| .|.+|+.+++.|...|. ++++++.+.-..   .          ..|.+.... +  .++.  ++.+...++
T Consensus        29 ~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~  107 (212)
T PRK08644         29 AKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID  107 (212)
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC
Confidence            4799999 58899999999999995 588887762110   0          112222211 1  1233  444555554


Q ss_pred             CHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHh-CCcceee
Q 039623           63 DHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEA-GNVKRFL  106 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~-~~~~~~i  106 (292)
                      + +.+.+.++++|+||.|.-.  ......+.+.|.+. + ++.+.
T Consensus       108 ~-~~~~~~~~~~DvVI~a~D~--~~~r~~l~~~~~~~~~-~p~I~  148 (212)
T PRK08644        108 E-DNIEELFKDCDIVVEAFDN--AETKAMLVETVLEHPG-KKLVA  148 (212)
T ss_pred             H-HHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHHhCC-CCEEE
Confidence            4 5566788999999998543  34455677888887 6 55444

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.57  E-value=0.0087  Score=51.20  Aligned_cols=74  Identities=23%  Similarity=0.274  Sum_probs=47.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCC----CCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL----QDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~----~d~~~~~~~~~~~d~v   77 (292)
                      |+|+|.| +|.+|..++..|.+.|++|++++|+     +++.+.+.   ..++.+-.++.    ...++..++ +.+|.|
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v   70 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARR-----GAHLDALN---ENGLRLEDGEITVPVLAADDPAEL-GPQDLV   70 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----hHHHHHHH---HcCCcccCCceeecccCCCChhHc-CCCCEE
Confidence            5899999 5999999999999999999999997     33332222   12222101111    001112233 689999


Q ss_pred             EEcCcCCC
Q 039623           78 ISTVSRGQ   85 (292)
Q Consensus        78 i~~a~~~~   85 (292)
                      |.+.....
T Consensus        71 ila~k~~~   78 (304)
T PRK06522         71 ILAVKAYQ   78 (304)
T ss_pred             EEeccccc
Confidence            98887554

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.57  E-value=0.011  Score=50.74  Aligned_cols=78  Identities=13%  Similarity=0.139  Sum_probs=46.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |||.|.|+ |++|..++..|...|+ +|.++++.....   +.+.+ ++.+... ......+.-..++.+ ++++|+||-
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~---~g~a~-d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIi   75 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIP---QGKAL-DMYEASPVGGFDTKVTGTNNYAD-TANSDIVVI   75 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChh---HHHHH-hhhhhhhccCCCcEEEecCCHHH-hCCCCEEEE
Confidence            68999995 9999999999999886 899999863311   11111 1111110 000111110112333 678999999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      ++|...
T Consensus        76 tag~p~   81 (305)
T TIGR01763        76 TAGLPR   81 (305)
T ss_pred             cCCCCC
Confidence            999644

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.55  E-value=0.013  Score=53.67  Aligned_cols=85  Identities=21%  Similarity=0.310  Sum_probs=59.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+| .|.+|..+++.|.+.|++|++++++..    +..+ ..+.+...+++++.++-..      ...++|.||..
T Consensus        17 ~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~----~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s   85 (480)
T PRK01438         17 LRVVVAG-LGVSGFAAADALLELGARVTVVDDGDD----ERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS   85 (480)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCch----hhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence            4799999 599999999999999999999987632    1221 2234556788888776432      23478999988


Q ss_pred             CcCCCchhHHHHHHHHHHhC
Q 039623           81 VSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .|...   ...++..+++.|
T Consensus        86 ~Gi~~---~~~~~~~a~~~g  102 (480)
T PRK01438         86 PGWRP---DAPLLAAAADAG  102 (480)
T ss_pred             CCcCC---CCHHHHHHHHCC
Confidence            88654   223555566666

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.55  E-value=0.014  Score=51.10  Aligned_cols=100  Identities=17%  Similarity=0.176  Sum_probs=64.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC-C-------------CcchhhHhh-h--hcCC--cEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS-D-------------PVKGKLIEI-F--KNLG--VNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-~-------------~~~~~~~~~-~--~~~~--v~~v~~D~   61 (292)
                      .+|+|.| .|.+|+.+++.|...|. ++++++.+.-.. +             ..|.+.... +  .++.  ++.+...+
T Consensus        29 ~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i  107 (355)
T PRK05597         29 AKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL  107 (355)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec
Confidence            4799999 58899999999999995 677777653111 0             112221111 1  1334  44444555


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      + .+...+.++++|+||.+....  ..-..+-++|.+.+ ++.+.
T Consensus       108 ~-~~~~~~~~~~~DvVvd~~d~~--~~r~~~n~~c~~~~-ip~v~  148 (355)
T PRK05597        108 T-WSNALDELRDADVILDGSDNF--DTRHLASWAAARLG-IPHVW  148 (355)
T ss_pred             C-HHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence            4 455667889999999988654  33445677888887 66443

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.54  E-value=0.017  Score=49.74  Aligned_cols=33  Identities=24%  Similarity=0.251  Sum_probs=30.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|.|.| .|.||+.+++.|..-|.+|.+.++..
T Consensus       143 kTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~  175 (324)
T COG0111         143 KTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYS  175 (324)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCC
Confidence            5899999 79999999999999999999999943

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.49  E-value=0.0029  Score=53.65  Aligned_cols=33  Identities=21%  Similarity=0.390  Sum_probs=30.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|.|+| +|.+|+.++..|+..|++|+++++++
T Consensus         6 ~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~   38 (286)
T PRK07819          6 QRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTE   38 (286)
T ss_pred             cEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCH
Confidence            5799999 59999999999999999999999993

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.49  E-value=0.01  Score=54.03  Aligned_cols=69  Identities=20%  Similarity=0.270  Sum_probs=46.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++++|+|+ |.+|+.++..|.+.|++|.+..|+     .++.+.+....  +...  .++   +++. .+.++|+||+|.
T Consensus       333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~-----~~~~~~la~~~--~~~~--~~~---~~~~-~l~~~DiVInat  398 (477)
T PRK09310        333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRT-----KAHAEALASRC--QGKA--FPL---ESLP-ELHRIDIIINCL  398 (477)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh--ccce--ech---hHhc-ccCCCCEEEEcC
Confidence            57999995 899999999999999999988887     55544332211  1111  122   2221 246799999998


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       399 P~g  401 (477)
T PRK09310        399 PPS  401 (477)
T ss_pred             CCC
Confidence            754

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.48  E-value=0.015  Score=56.99  Aligned_cols=148  Identities=15%  Similarity=0.203  Sum_probs=95.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEEE--CCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGKLIEIFKNLGVNVLY--GDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v~--~D~~d~~~~~~~~~------   72 (292)
                      ++.+|+||-|..|-.|++.|.++|.+-.++ +|+.-.. .-....++.+...++.+..  .|++..+.-..+++      
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirt-GYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRT-GYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchh-hHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            468999999999999999999999765544 5654332 3344455666666766544  36666666666664      


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceee-ccCCCCCCccCCccCCCCcchHHHH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFL-PSEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i-~s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      .+..|||+|..-.                   ..++.++-+..++.- -++.|| ||+.....++     .-..+|+-+.
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN-----~GQtNYG~aN 1922 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGN-----AGQTNYGLAN 1922 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCC-----Ccccccchhh
Confidence            3677888887644                   334444444444432 134444 4766655554     1245666699


Q ss_pred             HHHHHHHHH---cCccEEEEecceecc
Q 039623          132 IKIRRAIEA---EGIQYTYVSCNCFAG  155 (292)
Q Consensus       132 ~~~e~~~~~---~~~~~~~ir~~~~~~  155 (292)
                      ..+|+++++   .|.|-+.|..|.++.
T Consensus      1923 S~MERiceqRr~~GfPG~AiQWGAIGD 1949 (2376)
T KOG1202|consen 1923 SAMERICEQRRHEGFPGTAIQWGAIGD 1949 (2376)
T ss_pred             HHHHHHHHHhhhcCCCcceeeeecccc
Confidence            999999986   577777776666654

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=96.48  E-value=0.016  Score=52.60  Aligned_cols=73  Identities=14%  Similarity=0.175  Sum_probs=45.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      .|.|+| .|.+|.++++.|+++||+|++.+|+     +++.+.+......+-....  ..+.+++.+.++++|+||-+..
T Consensus         1 ~IG~IG-LG~MG~~mA~nL~~~G~~V~v~drt-----~~~~~~l~~~~~~g~~~~~--~~s~~e~v~~l~~~dvIil~v~   72 (467)
T TIGR00873         1 DIGVIG-LAVMGSNLALNMADHGFTVSVYNRT-----PEKTDEFLAEHAKGKKIVG--AYSIEEFVQSLERPRKIMLMVK   72 (467)
T ss_pred             CEEEEe-eHHHHHHHHHHHHhcCCeEEEEeCC-----HHHHHHHHhhccCCCCcee--cCCHHHHHhhcCCCCEEEEECC
Confidence            377888 8999999999999999999999998     5555444332011100111  1233444444455666665554


Q ss_pred             C
Q 039623           83 R   83 (292)
Q Consensus        83 ~   83 (292)
                      .
T Consensus        73 ~   73 (467)
T TIGR00873        73 A   73 (467)
T ss_pred             C
Confidence            4

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.47  E-value=0.019  Score=49.33  Aligned_cols=71  Identities=23%  Similarity=0.267  Sum_probs=48.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchh-hHhhhhc-----CCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGK-LIEIFKN-----LGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~-----~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||.|.|+ |.+|..++..|...|  .+|.+++++     .++.+ ...++.+     ....+..+   |.    +.+++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~-----~~~~~g~a~dl~~~~~~~~~~~i~~~---d~----~~l~~   67 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDIN-----KAKAEGEAMDLAHGTPFVKPVRIYAG---DY----ADCKG   67 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECC-----chhhhhHHHHHHccccccCCeEEeeC---CH----HHhCC
Confidence            58999996 999999999999998  589999998     33332 1111211     11222211   22    34789


Q ss_pred             CCEEEEcCcCCC
Q 039623           74 VDVVISTVSRGQ   85 (292)
Q Consensus        74 ~d~vi~~a~~~~   85 (292)
                      +|+||.+++...
T Consensus        68 aDiViita~~~~   79 (308)
T cd05292          68 ADVVVITAGANQ   79 (308)
T ss_pred             CCEEEEccCCCC
Confidence            999999999754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.46  E-value=0.0043  Score=56.92  Aligned_cols=77  Identities=21%  Similarity=0.166  Sum_probs=50.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-----c-CCcEE----EECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-----N-LGVNV----LYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~-~~v~~----v~~D~~d~~~~~~~~   71 (292)
                      |+|.|+| +|.+|+.++..|+++|++|++.+++     +++.+.+....     . .....    ..+.+.-.+++.+++
T Consensus         5 ~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~   78 (495)
T PRK07531          5 MKAACIG-GGVIGGGWAARFLLAGIDVAVFDPH-----PEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAV   78 (495)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHh
Confidence            6899998 7999999999999999999999998     55543322110     0 00000    001111123455778


Q ss_pred             ccCCEEEEcCcCC
Q 039623           72 KQVDVVISTVSRG   84 (292)
Q Consensus        72 ~~~d~vi~~a~~~   84 (292)
                      +++|+|+-++...
T Consensus        79 ~~aD~Vieavpe~   91 (495)
T PRK07531         79 AGADWIQESVPER   91 (495)
T ss_pred             cCCCEEEEcCcCC
Confidence            8999999887755

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.46  E-value=0.035  Score=47.26  Aligned_cols=92  Identities=16%  Similarity=0.161  Sum_probs=57.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhh-hcC-CcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIF-KNL-GVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~-~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      +||.|+|| |.+|+.++-.|+..+  .++..+++..... ....-.+.+. ... .-..+.+| .|    .+.++++|+|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~-~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiV   73 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKA-EGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIV   73 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccc-cchhcchhhcchhccCceEEecC-CC----hhhhcCCCEE
Confidence            68999998 999999999998776  4899999883322 2222111111 111 11223333 22    3557799999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +-+||...             ....+.+.+...+.+
T Consensus        74 vitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~  109 (313)
T COG0039          74 VITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA  109 (313)
T ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC
Confidence            99999876             334555555655555

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.46  E-value=0.011  Score=51.44  Aligned_cols=89  Identities=18%  Similarity=0.214  Sum_probs=56.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEE-ECCCCC-HHHHHHHH-ccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVL-YGDLQD-HESLIKAI-KQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~d-~~~~~~~~-~~~d~v   77 (292)
                      .+|||+||+|.+|..+++.+...|. +|++++++     .++.+.+...  .+++.+ ..+-.+ .+.+.++. .++|+|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s-----~~~~~~~~~~--lGa~~vi~~~~~~~~~~i~~~~~~gvd~v  228 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGS-----DEKCQLLKSE--LGFDAAINYKTDNVAERLRELCPEGVDVY  228 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCC-----HHHHHHHHHh--cCCcEEEECCCCCHHHHHHHHCCCCceEE
Confidence            3799999999999999998888998 79999887     5555443321  233332 221112 23343333 269999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      |+++|..   .....++.++..|
T Consensus       229 id~~g~~---~~~~~~~~l~~~G  248 (345)
T cd08293         229 FDNVGGE---ISDTVISQMNENS  248 (345)
T ss_pred             EECCCcH---HHHHHHHHhccCC
Confidence            9998853   2345555555444

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.45  E-value=0.018  Score=51.96  Aligned_cols=71  Identities=21%  Similarity=0.304  Sum_probs=52.2

Q ss_pred             ceEEEEcc----------------CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH
Q 039623            2 AATLIIGG----------------TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~   65 (292)
                      ++||||+|                ||.+|.+|++++...|++|+.+.-..+..           ...+++++..+  +.+
T Consensus       257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~-----------~p~~v~~i~V~--ta~  323 (475)
T PRK13982        257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLA-----------DPQGVKVIHVE--SAR  323 (475)
T ss_pred             CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCC-----------CCCCceEEEec--CHH
Confidence            57888865                59999999999999999999997542211           14567776554  555


Q ss_pred             HHHHHHc---cCCEEEEcCcCCC
Q 039623           66 SLIKAIK---QVDVVISTVSRGQ   85 (292)
Q Consensus        66 ~~~~~~~---~~d~vi~~a~~~~   85 (292)
                      ++.+++.   +.|++|++|+...
T Consensus       324 eM~~av~~~~~~Di~I~aAAVaD  346 (475)
T PRK13982        324 QMLAAVEAALPADIAIFAAAVAD  346 (475)
T ss_pred             HHHHHHHhhCCCCEEEEeccccc
Confidence            5555543   4799999999876

>PRK08462 biotin carboxylase; Validated

Probab=96.45  E-value=0.025  Score=51.22  Aligned_cols=94  Identities=12%  Similarity=0.156  Sum_probs=63.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC-------CCCCHHHHHHHHc-
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG-------DLQDHESLIKAIK-   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~-------D~~d~~~~~~~~~-   72 (292)
                      |+||||.| .|.++-.+++.+.+.|++|+++........+    .+.   . .-+.+..       |+.|.+.+.++.+ 
T Consensus         4 ~k~ili~~-~g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~----~~~---~-ad~~~~~~~~~~~~~y~~~~~l~~~~~~   74 (445)
T PRK08462          4 IKRILIAN-RGEIALRAIRTIQEMGKEAIAIYSTADKDAL----YLK---Y-ADAKICIGGAKSSESYLNIPAIISAAEI   74 (445)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEechhhcCCc----hhh---h-CCEEEEeCCCchhcccCCHHHHHHHHHH
Confidence            78999999 7999999999999999999988765322100    000   1 1122222       6677777777776 


Q ss_pred             -cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           73 -QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        73 -~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                       ++|+|+-..+..  .....+.+.|++.| ++.+-
T Consensus        75 ~~~D~i~pg~g~l--se~~~~a~~~e~~G-i~~~g  106 (445)
T PRK08462         75 FEADAIFPGYGFL--SENQNFVEICSHHN-IKFIG  106 (445)
T ss_pred             cCCCEEEECCCcc--ccCHHHHHHHHHCC-CeEEC
Confidence             799999887643  22355667777777 55443

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.45  E-value=0.01  Score=54.80  Aligned_cols=70  Identities=19%  Similarity=0.150  Sum_probs=46.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH-ccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI-KQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-~~~d~vi~~   80 (292)
                      ++++|+|+ |.+|+.++..|.+.|++|+++.|+     .++.+.+.....  ...+     +.+++.+.. ...|+|+|+
T Consensus       380 k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~-----~e~a~~la~~l~--~~~~-----~~~~~~~~~~~~~diiINt  446 (529)
T PLN02520        380 KLFVVIGA-GGAGKALAYGAKEKGARVVIANRT-----YERAKELADAVG--GQAL-----TLADLENFHPEEGMILANT  446 (529)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhC--Ccee-----eHhHhhhhccccCeEEEec
Confidence            46999997 889999999999999999999887     555544433221  1111     122222222 357888887


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      .+..
T Consensus       447 T~vG  450 (529)
T PLN02520        447 TSVG  450 (529)
T ss_pred             ccCC
Confidence            7543

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.44  E-value=0.037  Score=44.44  Aligned_cols=84  Identities=17%  Similarity=0.256  Sum_probs=61.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|.| .|.+|..-++.|++.|.+|++++....       +.+..+. ..+++++..++.. +    .+.+++.||-+
T Consensus        10 k~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~-------~~l~~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~a   76 (205)
T TIGR01470        10 RAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE-------SELTLLAEQGGITWLARCFDA-D----ILEGAFLVIAA   76 (205)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC-------HHHHHHHHcCCEEEEeCCCCH-H----HhCCcEEEEEC
Confidence            5799999 599999999999999999999976522       1122232 3378999998763 2    35688888866


Q ss_pred             CcCCCchhHHHHHHHHHHhC
Q 039623           81 VSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+..  .....+...|++.+
T Consensus        77 t~d~--~ln~~i~~~a~~~~   94 (205)
T TIGR01470        77 TDDE--ELNRRVAHAARARG   94 (205)
T ss_pred             CCCH--HHHHHHHHHHHHcC
Confidence            5543  35678888888776

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=96.44  E-value=0.013  Score=48.54  Aligned_cols=67  Identities=16%  Similarity=0.159  Sum_probs=41.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC---CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG---HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~v   77 (292)
                      +||.|.| .|.||+.+++.|.+.+   +++.++.++.    +++.+.+.   . .     +..  .+++.++ ..++|.|
T Consensus         3 ~rvgiIG-~GaIG~~va~~l~~~~~~~~~l~~V~~~~----~~~~~~~~---~-~-----~~~--~~~l~~ll~~~~DlV   66 (267)
T PRK13301          3 HRIAFIG-LGAIASDVAAGLLADAAQPCQLAALTRNA----ADLPPALA---G-R-----VAL--LDGLPGLLAWRPDLV   66 (267)
T ss_pred             eEEEEEC-ccHHHHHHHHHHhcCCCCceEEEEEecCC----HHHHHHhh---c-c-----Ccc--cCCHHHHhhcCCCEE
Confidence            6899999 8999999999987653   5666665542    22332221   1 1     111  1124444 3478888


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      +-||++.
T Consensus        67 VE~A~~~   73 (267)
T PRK13301         67 VEAAGQQ   73 (267)
T ss_pred             EECCCHH
Confidence            8888854

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.43  E-value=0.013  Score=50.78  Aligned_cols=87  Identities=25%  Similarity=0.378  Sum_probs=56.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC---HHHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD---HESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~   76 (292)
                      .+|||+||+|.+|+..++.+...|+.+++.+.+     ++|.+.+.   ..+...+.- ..+   .+.+.++..  ++|+
T Consensus       144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s-----~~k~~~~~---~lGAd~vi~-y~~~~~~~~v~~~t~g~gvDv  214 (326)
T COG0604         144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-----SEKLELLK---ELGADHVIN-YREEDFVEQVRELTGGKGVDV  214 (326)
T ss_pred             CEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-----HHHHHHHH---hcCCCEEEc-CCcccHHHHHHHHcCCCCceE
Confidence            379999999999999999999999877777776     55554333   334433222 222   234444443  5999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhC
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      |+.+.|..   .....+++++..|
T Consensus       215 v~D~vG~~---~~~~~l~~l~~~G  235 (326)
T COG0604         215 VLDTVGGD---TFAASLAALAPGG  235 (326)
T ss_pred             EEECCCHH---HHHHHHHHhccCC
Confidence            99988843   3334555554444

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.43  E-value=0.007  Score=52.19  Aligned_cols=84  Identities=24%  Similarity=0.358  Sum_probs=53.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-HHHHHHHHccCCEEEEcC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-HESLIKAIKQVDVVISTV   81 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~~~d~vi~~a   81 (292)
                      +++|+||+|.+|..+++.+.+.|.+|++++++     +++.+.+..   .+...+. +..+ .+.+.+. .++|.+++++
T Consensus       165 ~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~-----~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~-~~~d~v~~~~  234 (332)
T cd08259         165 TVLVTGAGGGVGIHAIQLAKALGARVIAVTRS-----PEKLKILKE---LGADYVI-DGSKFSEDVKKL-GGADVVIELV  234 (332)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHHH---cCCcEEE-ecHHHHHHHHhc-cCCCEEEECC
Confidence            69999999999999999999999999999887     444443322   2332221 2211 1222222 2799999998


Q ss_pred             cCCCchhHHHHHHHHHHh
Q 039623           82 SRGQIPEQAKIIAAVKEA   99 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~   99 (292)
                      |..   .....++.+...
T Consensus       235 g~~---~~~~~~~~~~~~  249 (332)
T cd08259         235 GSP---TIEESLRSLNKG  249 (332)
T ss_pred             ChH---HHHHHHHHhhcC
Confidence            843   244445555433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.43  E-value=0.013  Score=50.94  Aligned_cols=90  Identities=14%  Similarity=0.221  Sum_probs=55.6

Q ss_pred             ceEEEEccCCcchHHHHHHHH-hCCCC---EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASV-KAGHP---TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~-~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |+|.|.||||.+|+.+++.|. +..+.   ++.++-+.+   ..+.   ..+.....  ..-++.+.    ..+.++|++
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s---~g~~---~~f~~~~~--~v~~~~~~----~~~~~vDiv   68 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQL---GQAA---PSFGGTTG--TLQDAFDI----DALKALDII   68 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhh---CCCc---CCCCCCcc--eEEcCccc----ccccCCCEE
Confidence            589999999999999999999 55665   334433211   1111   11111222  22333332    235689999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcc-eeec
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVK-RFLP  107 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~-~~i~  107 (292)
                      |.++|.   ..++.+...+.++| .. .+|-
T Consensus        69 ffa~g~---~~s~~~~p~~~~aG-~~~~VID   95 (366)
T TIGR01745        69 ITCQGG---DYTNEIYPKLRESG-WQGYWID   95 (366)
T ss_pred             EEcCCH---HHHHHHHHHHHhCC-CCeEEEE
Confidence            999974   46788888888888 54 3443

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.41  E-value=0.014  Score=50.25  Aligned_cols=68  Identities=22%  Similarity=0.337  Sum_probs=54.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |++|.|+| .|.+|+=++.+-..-|++|++++-++...  ..        .-.-..+.++..|++.+.++.+++|+|=.
T Consensus         1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~P--A~--------~va~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAP--AA--------QVADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCc--hh--------hcccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            78999999 69999999999999999999998764432  11        11235677888899999999999999843

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.41  E-value=0.0093  Score=51.86  Aligned_cols=87  Identities=14%  Similarity=0.240  Sum_probs=56.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC---C-HHHHHHHH-ccCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ---D-HESLIKAI-KQVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~---d-~~~~~~~~-~~~d~v   77 (292)
                      +|+|+||+|.+|..+++.+...|.+|++++++     +++.+.+...  .+++.+. |..   + .+.+.++. .++|+|
T Consensus       154 ~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~-----~~~~~~~~~~--lGa~~vi-~~~~~~~~~~~i~~~~~~gvd~v  225 (338)
T cd08295         154 TVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS-----DEKVDLLKNK--LGFDDAF-NYKEEPDLDAALKRYFPNGIDIY  225 (338)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHh--cCCceeE-EcCCcccHHHHHHHhCCCCcEEE
Confidence            69999999999999999999999999999887     5565444331  2333221 211   2 12233332 268999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +++.|.   ......++.++..|
T Consensus       226 ~d~~g~---~~~~~~~~~l~~~G  245 (338)
T cd08295         226 FDNVGG---KMLDAVLLNMNLHG  245 (338)
T ss_pred             EECCCH---HHHHHHHHHhccCc
Confidence            999883   33445556555444

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14851 hypothetical protein; Provisional

Probab=96.40  E-value=0.043  Score=52.06  Aligned_cols=102  Identities=17%  Similarity=0.168  Sum_probs=67.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC------------C--CcchhhHhh----h-hcCCcEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS------------D--PVKGKLIEI----F-KNLGVNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------------~--~~~~~~~~~----~-~~~~v~~v~~D~   61 (292)
                      .+|+|.| .|.+|+.++..|...|. +++.++.+.-..            +  ..|.+....    + ...+++.+...+
T Consensus        44 ~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~i  122 (679)
T PRK14851         44 AKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAGI  122 (679)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence            4799999 67899999999999995 566555431110            0  112222221    1 123466776777


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      + .+.+.+.++++|+||.+.-...+..-..+.+.|.+.+ ++.+.
T Consensus       123 ~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~-iP~i~  165 (679)
T PRK14851        123 N-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKG-IPVIT  165 (679)
T ss_pred             C-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCC-CCEEE
Confidence            4 5667788999999998875544455567888899887 66554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.40  E-value=0.0038  Score=45.86  Aligned_cols=32  Identities=31%  Similarity=0.507  Sum_probs=28.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEe-cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALV-RE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~   34 (292)
                      +||.|+| +|.+|.+|.+.|.+.||+|.++. |+
T Consensus        11 l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs   43 (127)
T PF10727_consen   11 LKIGIIG-AGRVGTALARALARAGHEVVGVYSRS   43 (127)
T ss_dssp             -EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCH
T ss_pred             cEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            5899999 59999999999999999999885 54

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=96.38  E-value=0.044  Score=47.38  Aligned_cols=33  Identities=12%  Similarity=0.085  Sum_probs=27.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRES   35 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~   35 (292)
                      ||||||||+.+.+  .+++.|.+.|  ++|++.+.++
T Consensus         1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~   35 (326)
T PRK12767          1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISE   35 (326)
T ss_pred             CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCC
Confidence            8999999986555  8999999984  9999998763

>PRK07574 formate dehydrogenase; Provisional

Probab=96.37  E-value=0.016  Score=51.07  Aligned_cols=68  Identities=21%  Similarity=0.195  Sum_probs=46.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.||+.+++.|..-|.+|++.+|+...     .+.   ....+++.       ..++.++++.+|+|+.+.
T Consensus       193 ktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~-----~~~---~~~~g~~~-------~~~l~ell~~aDvV~l~l  256 (385)
T PRK07574        193 MTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLP-----EEV---EQELGLTY-------HVSFDSLVSVCDVVTIHC  256 (385)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCc-----hhh---HhhcCcee-------cCCHHHHhhcCCEEEEcC
Confidence            5799999 7999999999999999999999987421     100   00112211       223566777888887777


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus       257 Plt~  260 (385)
T PRK07574        257 PLHP  260 (385)
T ss_pred             CCCH
Confidence            6553

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=96.36  E-value=0.038  Score=50.15  Aligned_cols=93  Identities=16%  Similarity=0.164  Sum_probs=58.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEE-C------CCCCHHHHHHHHc-
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLY-G------DLQDHESLIKAIK-   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~-~------D~~d~~~~~~~~~-   72 (292)
                      ||||||.| .|.+|..+++.+.+.|++|++++.+.....+ ..    .  ... +.+. +      ++.|.+.+.++.+ 
T Consensus         2 ~k~iLi~g-~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~-~~----~--~ad-~~~~~~~~~~~~~y~d~~~l~~~a~~   72 (451)
T PRK08591          2 FDKILIAN-RGEIALRIIRACKELGIKTVAVHSTADRDAL-HV----Q--LAD-EAVCIGPAPSKKSYLNIPAIISAAEI   72 (451)
T ss_pred             cceEEEEC-CCHHHHHHHHHHHHcCCeEEEEcChhhccCC-CH----h--HCC-EEEEeCCCCcccccCCHHHHHHHHHH
Confidence            57899998 7999999999999999999988554221100 00    0  011 2222 1      4556677777654 


Q ss_pred             -cCCEEEEcCcCCCchhHHHHHHHHHHhCCccee
Q 039623           73 -QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRF  105 (292)
Q Consensus        73 -~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~  105 (292)
                       ++|+|+-..+.....  ..+.+.+++.| ++.+
T Consensus        73 ~~id~I~p~~~~~~e~--~~~~~~~e~~g-i~~~  103 (451)
T PRK08591         73 TGADAIHPGYGFLSEN--ADFAEICEDSG-FTFI  103 (451)
T ss_pred             hCCCEEEECCCccccC--HHHHHHHHHCC-CceE
Confidence             799999766543311  14566677777 4433

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.36  E-value=0.012  Score=50.68  Aligned_cols=86  Identities=15%  Similarity=0.289  Sum_probs=56.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHH-ccCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAI-KQVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~-~~~d~vi   78 (292)
                      +|+|+||+|.+|..+++.+...|.+|++++++     +++.+.++.   .+++.+. |..+.   +.+.++. .++|+|+
T Consensus       146 ~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s-----~~~~~~l~~---~Ga~~vi-~~~~~~~~~~v~~~~~~gvd~vl  216 (329)
T cd08294         146 TVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGS-----DDKVAWLKE---LGFDAVF-NYKTVSLEEALKEAAPDGIDCYF  216 (329)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---cCCCEEE-eCCCccHHHHHHHHCCCCcEEEE
Confidence            69999999999999999999999999999887     666655443   3443322 22222   2333332 2589999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ++.|.   ......++.++..|
T Consensus       217 d~~g~---~~~~~~~~~l~~~G  235 (329)
T cd08294         217 DNVGG---EFSSTVLSHMNDFG  235 (329)
T ss_pred             ECCCH---HHHHHHHHhhccCC
Confidence            98884   23344455554433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.35  E-value=0.032  Score=47.72  Aligned_cols=32  Identities=22%  Similarity=0.297  Sum_probs=30.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+|.|+| .|.+|..+++.|.+.|++|.+.+|+
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~   32 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVN   32 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECC
Confidence            4899999 8999999999999999999999998

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.35  E-value=0.017  Score=49.76  Aligned_cols=92  Identities=17%  Similarity=0.157  Sum_probs=56.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhh-cCCc-EEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFK-NLGV-NVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v-~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      +||.|+|| |.+|..++..|...| .++..++++.........+ +.... ..+. ..+.+    ..++. .++++|+||
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lD-l~~~~~~~~~~~~i~~----~~d~~-~l~~ADiVV   78 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALD-LKHFSTLVGSNINILG----TNNYE-DIKDSDVVV   78 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHH-HhhhccccCCCeEEEe----CCCHH-HhCCCCEEE
Confidence            58999996 999999999998888 6888999874321100111 11110 0111 11121    11243 678999999


Q ss_pred             EcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           79 STVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      .++|...             ....+.+.+.+.+..
T Consensus        79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~  113 (319)
T PTZ00117         79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC  113 (319)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            9997754             244556666666665

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.35  E-value=0.068  Score=44.68  Aligned_cols=105  Identities=15%  Similarity=0.162  Sum_probs=65.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCC--------------CcchhhHhhh---hcCCcEEEEC-CCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASD--------------PVKGKLIEIF---KNLGVNVLYG-DLQ   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--------------~~~~~~~~~~---~~~~v~~v~~-D~~   62 (292)
                      .+|+|.| .|.+|+++++.|...| .++++++.+.-..+              ..|.+.+.+.   .++.+++... +..
T Consensus        31 s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i  109 (268)
T PRK15116         31 AHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFI  109 (268)
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence            4799999 6889999999999999 57888776522110              0112122111   1334333322 333


Q ss_pred             CHHHHHHHHc-cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccCC
Q 039623           63 DHESLIKAIK-QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEF  110 (292)
Q Consensus        63 d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~  110 (292)
                      +++...+++. ++|.||.+....  ..-..+.+.|++++ ++.+.....
T Consensus       110 ~~e~~~~ll~~~~D~VIdaiD~~--~~k~~L~~~c~~~~-ip~I~~gGa  155 (268)
T PRK15116        110 TPDNVAEYMSAGFSYVIDAIDSV--RPKAALIAYCRRNK-IPLVTTGGA  155 (268)
T ss_pred             ChhhHHHHhcCCCCEEEEcCCCH--HHHHHHHHHHHHcC-CCEEEECCc
Confidence            5566667775 799999988754  44566888899887 665544333

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.34  E-value=0.042  Score=47.18  Aligned_cols=91  Identities=13%  Similarity=0.057  Sum_probs=56.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      +||.|+|+ |.+|+.++-.|...|  .++..++++.... ......+++..  .....+...  .|.+    .++++|+|
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~-~g~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~adiv   75 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKL-KGEAMDLQHGSAFLKNPKIEAD--KDYS----VTANSKVV   75 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHH-HHHHHHHHHhhccCCCCEEEEC--CCHH----HhCCCCEE
Confidence            58999995 999999999998887  4688888874321 11111122221  011233321  1322    37899999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      |.++|...             ....+.+.+.+.+++
T Consensus        76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~  111 (312)
T cd05293          76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS  111 (312)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999755             334555666666665

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.34  E-value=0.02  Score=45.79  Aligned_cols=89  Identities=22%  Similarity=0.257  Sum_probs=56.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC--CCC-EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA--GHP-TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~--g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++|.|.| .|.||..+++.+.+.  +++ +.+.+|+     .+|.+.+.....      ..+.+   ++.++++.+|.++
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~-----~ek~~~~~~~~~------~~~~s---~ide~~~~~DlvV   65 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRD-----EEKAKELEASVG------RRCVS---DIDELIAEVDLVV   65 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCC-----HHHHHHHHhhcC------CCccc---cHHHHhhccceee
Confidence            5789999 899999999977765  355 4555666     566654433211      11112   3445557788888


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      -||++   +..+.....+.++| +..+|.|+
T Consensus        66 EaAS~---~Av~e~~~~~L~~g-~d~iV~SV   92 (255)
T COG1712          66 EAASP---EAVREYVPKILKAG-IDVIVMSV   92 (255)
T ss_pred             eeCCH---HHHHHHhHHHHhcC-CCEEEEec
Confidence            88873   44555555566666 66666554

>PLN02602 lactate dehydrogenase

Probab=96.32  E-value=0.049  Score=47.51  Aligned_cols=91  Identities=13%  Similarity=0.100  Sum_probs=56.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      +||.|+|+ |.+|+.++-.|+..+  .++..++.+.... ....-.+++..  ..... +.++ .|   + +.++++|+|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~-~g~a~DL~~~~~~~~~~~-i~~~-~d---y-~~~~daDiV  109 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKL-RGEMLDLQHAAAFLPRTK-ILAS-TD---Y-AVTAGSDLC  109 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchh-hHHHHHHHhhhhcCCCCE-EEeC-CC---H-HHhCCCCEE
Confidence            58999995 999999999998887  3688888873322 11111112211  11222 2221 12   2 237899999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      |.+||...             ....+.+.+.+.+++
T Consensus       110 VitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~  145 (350)
T PLN02602        110 IVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS  145 (350)
T ss_pred             EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            99999864             344556666666665

>PLN02688 pyrroline-5-carboxylate reductase

Probab=96.31  E-value=0.01  Score=49.83  Aligned_cols=65  Identities=23%  Similarity=0.339  Sum_probs=47.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC----CEEEE-ecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH----PTFAL-VRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |||.++| .|.+|..+++.|++.|+    +|++. .|+     +++.+.+   ...++...    .+   ..++++++|+
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~-----~~~~~~~---~~~g~~~~----~~---~~e~~~~aDv   64 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSN-----PARRDVF---QSLGVKTA----AS---NTEVVKSSDV   64 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCC-----HHHHHHH---HHcCCEEe----CC---hHHHHhcCCE
Confidence            6799999 89999999999999998    88888 776     5554333   23355431    12   2345678999


Q ss_pred             EEEcCc
Q 039623           77 VISTVS   82 (292)
Q Consensus        77 vi~~a~   82 (292)
                      ||.+..
T Consensus        65 Vil~v~   70 (266)
T PLN02688         65 IILAVK   70 (266)
T ss_pred             EEEEEC
Confidence            999984

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.31  E-value=0.013  Score=39.30  Aligned_cols=35  Identities=26%  Similarity=0.448  Sum_probs=31.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS   38 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   38 (292)
                      +|+|.| .|++|..++..|.+.|.+|+.+.|++...
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence            688999 69999999999999999999999986543

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.30  E-value=0.014  Score=50.59  Aligned_cols=64  Identities=25%  Similarity=0.247  Sum_probs=45.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.||+.+++.|...|++|.+.+|+..     ...       ..++     .  .+++.++++++|+|+.+.
T Consensus       147 ~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~-----~~~-------~~~~-----~--~~~l~ell~~aDiVil~l  206 (330)
T PRK12480        147 MTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPN-----KDL-------DFLT-----Y--KDSVKEAIKDADIISLHV  206 (330)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChh-----Hhh-------hhhh-----c--cCCHHHHHhcCCEEEEeC
Confidence            5799999 799999999999999999999998732     110       0000     1  123567777888888777


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus       207 P~t~  210 (330)
T PRK12480        207 PANK  210 (330)
T ss_pred             CCcH
Confidence            6553

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.29  E-value=0.024  Score=41.65  Aligned_cols=31  Identities=32%  Similarity=0.411  Sum_probs=27.6

Q ss_pred             EEEEccCCcchHHHHHHHHhCC--CCEEEEecC
Q 039623            4 TLIIGGTGYIGKKILEASVKAG--HPTFALVRE   34 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~   34 (292)
                      |.|+|+||-||++.+.-+.+..  ++|.+++-+
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~   33 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAG   33 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcC
Confidence            6899999999999999999886  889888765

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.016  Score=48.82  Aligned_cols=55  Identities=18%  Similarity=0.348  Sum_probs=46.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+|.++.+|+.++..|.+.|.+|+...++.                             ..+.+.++.+|+||.++
T Consensus       159 k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------------~~l~~~~~~ADIVIsAv  209 (286)
T PRK14175        159 KNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------------KDMASYLKDADVIVSAV  209 (286)
T ss_pred             CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHHhhCCEEEECC
Confidence            5799999999999999999999999999887651                             13567788999999999


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      |...
T Consensus       210 g~p~  213 (286)
T PRK14175        210 GKPG  213 (286)
T ss_pred             CCCc
Confidence            8775

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.29  E-value=0.016  Score=49.98  Aligned_cols=87  Identities=16%  Similarity=0.202  Sum_probs=56.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEE-ECCC-CCHHHHHHHHc--cCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVL-YGDL-QDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v-~~D~-~d~~~~~~~~~--~~d~vi   78 (292)
                      +|||+||+|.+|..+++.+...|.+|++++++     +++.+.+..   .+++.+ ..+- .+.........  ++|+++
T Consensus       141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s-----~~~~~~~~~---lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~  212 (325)
T TIGR02825       141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKVAYLKK---LGFDVAFNYKTVKSLEETLKKASPDGYDCYF  212 (325)
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---cCCCEEEeccccccHHHHHHHhCCCCeEEEE
Confidence            69999999999999999888899999999887     566654443   344322 2211 12222222222  589999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+.|..   .....++.++..|
T Consensus       213 d~~G~~---~~~~~~~~l~~~G  231 (325)
T TIGR02825       213 DNVGGE---FSNTVIGQMKKFG  231 (325)
T ss_pred             ECCCHH---HHHHHHHHhCcCc
Confidence            998842   3345555555444

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK06988 putative formyltransferase; Provisional

Probab=96.27  E-value=0.03  Score=48.12  Aligned_cols=79  Identities=14%  Similarity=0.163  Sum_probs=51.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc--h-hhHhhhhcCCcEEEE-CCCCCHHHHHHHHc-cCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVK--G-KLIEIFKNLGVNVLY-GDLQDHESLIKAIK-QVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~-~~~~~~~~~~v~~v~-~D~~d~~~~~~~~~-~~d   75 (292)
                      ||||++.| |+..|....+.|++.|++|.++.-.+... ..+  . ...+.....++.++. .++.+++.+..+-+ ++|
T Consensus         2 ~mkIvf~G-s~~~a~~~L~~L~~~~~~i~~Vvt~~d~~-~~~~~~~~v~~~A~~~gip~~~~~~~~~~~~~~~l~~~~~D   79 (312)
T PRK06988          2 KPRAVVFA-YHNVGVRCLQVLLARGVDVALVVTHEDNP-TENIWFGSVAAVAAEHGIPVITPADPNDPELRAAVAAAAPD   79 (312)
T ss_pred             CcEEEEEe-CcHHHHHHHHHHHhCCCCEEEEEcCCCCC-ccCcCCCHHHHHHHHcCCcEEccccCCCHHHHHHHHhcCCC
Confidence            58999999 88899999999999999988776543211 111  1 112233456888877 56666554433333 689


Q ss_pred             EEEEcC
Q 039623           76 VVISTV   81 (292)
Q Consensus        76 ~vi~~a   81 (292)
                      ++|-.+
T Consensus        80 liv~~~   85 (312)
T PRK06988         80 FIFSFY   85 (312)
T ss_pred             EEEEeh
Confidence            887544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	292
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		5e-95
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		8e-82
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		2e-71
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		4e-57
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		2e-51
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		5e-51
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		6e-51
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		1e-50
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		3e-50

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score =  343 bits (881), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 173/275 (62%), Positives = 207/275 (75%), Gaps = 3/275 (1%)
Query: 19  EASVKAGHPTFALVRESTAS-DPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV 77
           +AS+  GHPTF LVRESTAS +  K +L+E FK  G N+++G + DH SL++A+K VDVV
Sbjct: 22  KASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81
Query: 78  ISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRA 137
           ISTV   QI  Q  II A+KE G VKRF PSEFGNDVD + + VEPAKS +  K K+RRA
Sbjct: 82  ISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-NVHAVEPAKSVFEVKAKVRRA 140
Query: 138 IEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI 197
           IEAEGI YTYVS NCFAGYFL +LAQ G  APPR+KV I GDGNA  V+ KE+DI T+TI
Sbjct: 141 IEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 200
Query: 198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPL 257
            ++D PRTLNKTLY+R P N  S NELV LWE KI KTLEK YV EE++LK I D P P 
Sbjct: 201 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPA 260
Query: 258 NVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           N+ +AI+++ FVKGDQ NFEI  A GVEAS+LYP+
Sbjct: 261 NISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPD 294

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score =  300 bits (767), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 151/275 (54%), Positives = 202/275 (73%), Gaps = 4/275 (1%)
Query: 20  ASVKAGHPTFALVRES-TASDP-VKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV 77
           AS+KAG+PT+ALVR++ TA++P  K +LI+ +++LGV +L GD+ DHE+L+KAIKQVD+V
Sbjct: 21  ASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV 80
Query: 78  ISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRA 137
           I    R  I +Q KII A+KEAGNVK+F PSEFG DVDR  + VEP +  + +K  IRR 
Sbjct: 81  ICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRV 139
Query: 138 IEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI 197
           IEAEG+ YTY+ C+ F GYFL  LAQ+ A  PPR+KV I GDGN    Y  E D+ T+TI
Sbjct: 140 IEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTI 199
Query: 198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPL 257
            + + P TLNK ++IR P N  + NE++ LWE KIGKTLEKTYV+EE++LKDIQ++  P 
Sbjct: 200 RAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPH 259
Query: 258 NVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           N LLA+ ++  +KGD A +EI+ A  +EASE YP+
Sbjct: 260 NYLLALYHSQQIKGD-AVYEIDPAKDIEASEAYPD 293

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/278 (47%), Positives = 181/278 (65%), Gaps = 6/278 (2%)
Query: 20  ASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS 79
           AS+  GHPT+ L R    S+  K +++  FK LG  ++   L DH+ L+ A+KQVDVVIS
Sbjct: 23  ASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 82
Query: 80  TVSRG----QIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIR 135
            ++ G     I EQ K++ A+KEAGN+KRFLPSEFG D D  ++ ++P    + DK K+R
Sbjct: 83  ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVR 142
Query: 136 RAIEAEGIQYTYVSCNCFAGYFLPTLAQI-GAPAPPREKVTIFGDGNAGAVYNKEDDIAT 194
           RAIEA  I YTYVS N FAGYF  +LAQ+ G   PPR+KV I+GDGN   ++  EDD+ T
Sbjct: 143 RAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT 202
Query: 195 YTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAP 254
           YTI SID P+TLNKT+YIRPP N+ S  E++ +WE    + L+K Y++ +  L D++D  
Sbjct: 203 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKS 262
Query: 255 IPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
               ++    Y  F +GD  NFEI   + +EA++LYPE
Sbjct: 263 YEEKIVRCHLYQIFFRGDLYNFEIG-PNAIEATKLYPE 299

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score =  218 bits (554), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 117/275 (42%), Positives = 170/275 (61%), Gaps = 5/275 (1%)
Query: 20  ASVKAGHPTFALVRESTA-SDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
           AS+   HPTF   R  T  S P   +L E F+++GV ++ G++++HE ++  +KQVD+VI
Sbjct: 23  ASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82
Query: 79  STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
           S +    I  Q  II A+K AGN+KRFLPS+FG + DR + +  P +S    K  IRRAI
Sbjct: 83  SALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPL-PPFESVLEKKRIIRRAI 141
Query: 139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPR-EKVTIFGDGNAGAVYNKEDDIATYTI 197
           EA  + YTYVS NCF  YF+  L    +P P R + + I+G G    V N E+DIA YTI
Sbjct: 142 EAAALPYTYVSANCFGAYFVNYLLH-PSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI 200
Query: 198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPL 257
                PR  N+ +  RPP N+ S NEL++LWE K G + +K ++ +E+L++  Q+ P P 
Sbjct: 201 KVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQ 260
Query: 258 NVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           N+ ++I ++ FVKGD  ++E+     +EAS LYPE
Sbjct: 261 NIPVSILHSIFVKGDLMSYEMR-KDDIEASNLYPE 294

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 105/275 (38%), Positives = 163/275 (59%), Gaps = 4/275 (1%)
Query: 20  ASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVV 77
           AS+ A  PT+ L R    S P K K+ +  ++ G  ++YG + + E++ K +K+  +D+V
Sbjct: 29  ASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87
Query: 78  ISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRA 137
           +STV    I +Q  ++ A+K  G +KRFLPSEFG+DV+R+ + VEP  + Y +K ++R+ 
Sbjct: 88  VSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRA-DPVEPGLNMYREKRRVRQL 146
Query: 138 IEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI 197
           +E  GI +TY+ CN  A +            PP +   I+GDGN  A +    DI  +T+
Sbjct: 147 VEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTM 206
Query: 198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPL 257
            ++D  RTLNK+++ RP  N  + NEL ++WE KIG+TL +  V E+ LL    +  IP 
Sbjct: 207 KTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQ 266
Query: 258 NVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           +V+ A T+  F+KG Q NF I+    VE + LYPE
Sbjct: 267 SVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPE 301

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score =  197 bits (502), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/274 (41%), Positives = 171/274 (62%), Gaps = 9/274 (3%)
Query: 19  EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
           + S+K GHPT+   R +++    K  L++ F++LG  ++ G+L +HE L++ +K+VDVVI
Sbjct: 25  KGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVI 80
Query: 79  STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
           S ++  QI +Q KI+ A+K AGN+KRFLPS+FG + DR  N + P ++    K  IRRAI
Sbjct: 81  SALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRI-NALPPFEALIERKRMIRRAI 139
Query: 139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN 198
           E   I YTYVS NCFA YF+  L +   P  P++++T++G G A    N E DI  YTI 
Sbjct: 140 EEANIPYTYVSANCFASYFINYLLR---PYDPKDEITVYGTGEAKFAMNYEQDIGLYTIK 196
Query: 199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLN 258
               PR LN+ +  RP  N+ +  EL++ WE KIGK  +K +V EE+++   ++ P P N
Sbjct: 197 VATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPEN 256
Query: 259 VLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           + +AI +  F+ G   +++    + VEAS LYPE
Sbjct: 257 IPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 289

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score =  197 bits (501), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 113/274 (41%), Positives = 171/274 (62%), Gaps = 9/274 (3%)
Query: 19  EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
           + S+K GHPT+   R +++    K  L++ F++LG  ++ G+L +HE L++ +K+VDVVI
Sbjct: 29  KGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVI 84
Query: 79  STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
           S ++  QI +Q KI+ A+K AGN+KRFLPS+FG + DR  N + P ++    K  IRRAI
Sbjct: 85  SALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRI-NALPPFEALIERKRMIRRAI 143
Query: 139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN 198
           E   I YTYVS NCFA YF+  L +   P  P++++T++G G A    N E DI  YTI 
Sbjct: 144 EEANIPYTYVSANCFASYFINYLLR---PYDPKDEITVYGTGEAKFAMNYEQDIGLYTIK 200
Query: 199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLN 258
               PR LN+ +  RP  N+ +  EL++ WE KIGK  +K +V EE+++   ++ P P N
Sbjct: 201 VATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPEN 260
Query: 259 VLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           + +AI +  F+ G   +++    + VEAS LYPE
Sbjct: 261 IPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 293

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/274 (40%), Positives = 171/274 (62%), Gaps = 9/274 (3%)
Query: 19  EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
           + S+K GHPT+   R +++    K  L++ F++LG  ++ G+L +HE L++ +K+VDVVI
Sbjct: 29  KGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVI 84
Query: 79  STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
           S ++  QI +Q KI+ A+K AGN+KRFLPS+FG + DR  N + P ++    +  IRRAI
Sbjct: 85  SALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRI-NALPPFEALIERQRMIRRAI 143
Query: 139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN 198
           E   I YTYVS NCFA YF+  L +   P  P++++T++G G A    N E DI  YTI 
Sbjct: 144 EEANIPYTYVSANCFASYFINYLLR---PYDPKDEITVYGTGEAKFAMNYEQDIGLYTIK 200
Query: 199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLN 258
               PR LN+ +  RP  N+ +  EL++ WE KIGK  +K +V EE+++   ++ P P N
Sbjct: 201 VATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPEN 260
Query: 259 VLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           + +AI +  F+ G   +++    + VEAS LYPE
Sbjct: 261 IPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 293

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/274 (40%), Positives = 170/274 (62%), Gaps = 9/274 (3%)
Query: 19  EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI 78
           + S+K GHPT+   R +++    K  L++ F++LG  ++ G+L +HE L++ +K+VDVVI
Sbjct: 29  KGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVI 84
Query: 79  STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAI 138
           S ++  Q  +Q KI+ A+K AGN+KRFLPS+FG + DR  N + P ++    K  IRRAI
Sbjct: 85  SALAVPQYLDQFKILEAIKVAGNIKRFLPSDFGVEEDRI-NALPPFEALIERKRMIRRAI 143
Query: 139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN 198
           E   I YTYVS NCFA YF+  L +   P  P++++T++G G A    N E DI  YTI 
Sbjct: 144 EEANIPYTYVSANCFASYFINYLLR---PYDPKDEITVYGTGEAKFAMNYEQDIGLYTIK 200
Query: 199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPLN 258
               PR LN+ +  RP  N+ +  EL++ WE KIGK  +K +V EE+++   ++ P P N
Sbjct: 201 VATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPEN 260
Query: 259 VLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           + +AI +  F+ G   +++    + VEAS LYPE
Sbjct: 261 IPIAILHCLFIDGATMSYDFK-ENDVEASTLYPE 293

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	292
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-112
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	1e-111
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-110
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-108
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-105
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-103
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	2e-25
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-18
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	7e-18
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-16
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-16
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	8e-16
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	1e-14
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-14
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-14
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-14
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-14
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-13
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	5e-12
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	5e-11
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-06
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	5e-05
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	7e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	7e-05
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-04
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-04
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	3e-04
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-04
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	9e-04

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  326 bits (838), Expect = e-112
 Identities = 181/296 (61%), Positives = 218/296 (73%), Gaps = 6/296 (2%)

Query: 1   MAAT---LIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-DPVKGKLIEIFKNLGVNV 56
           M +    L+IG TGYIG+ + +AS+  GHPTF LVRESTAS +  K +L+E FK  G N+
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60

Query: 57  LYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDR 116
           ++G + DH SL++A+K VDVVISTV   QI  Q  II A+KE G VKRF PSEFGNDVD 
Sbjct: 61  VHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN 120

Query: 117 SQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI 176
               VEPAKS +  K K+RRAIEAEGI YTYVS NCFAGYFL +LAQ G  APPR+KV I
Sbjct: 121 VH-AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVI 179

Query: 177 FGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL 236
            GDGNA  V+ KE+DI T+TI ++D PRTLNKTLY+R P N  S NELV LWE KI KTL
Sbjct: 180 LGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 239

Query: 237 EKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           EK YV EE++LK I D P P N+ +AI+++ FVKGDQ NFEI   +GVEAS+LYP+
Sbjct: 240 EKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIG-PAGVEASQLYPD 294

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  323 bits (830), Expect = e-111
 Identities = 155/290 (53%), Positives = 208/290 (71%), Gaps = 4/290 (1%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTAS--DPVKGKLIEIFKNLGVNVLYGDLQ 62
           LI+G TG IG+ I+ AS+KAG+PT+ALVR++  +     K +LI+ +++LGV +L GD+ 
Sbjct: 6   LILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIN 65

Query: 63  DHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVE 122
           DHE+L+KAIKQVD+VI    R  I +Q KII A+KEAGNVK+F PSEFG DVDR  + VE
Sbjct: 66  DHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRH-DAVE 124

Query: 123 PAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNA 182
           P +  + +K  IRR IEAEG+ YTY+ C+ F GYFL  LAQ+ A  PPR+KV I GDGN 
Sbjct: 125 PVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNV 184

Query: 183 GAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA 242
              Y  E D+ T+TI + + P TLNK ++IR P N  + NE++ LWE KIGKTLEKTYV+
Sbjct: 185 KGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS 244

Query: 243 EEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           EE++LKDIQ++  P N LLA+ ++  +KGD   +EI+ A  +EASE YP+
Sbjct: 245 EEQVLKDIQESSFPHNYLLALYHSQQIKGDA-VYEIDPAKDIEASEAYPD 293

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  320 bits (822), Expect = e-110
 Identities = 143/300 (47%), Positives = 196/300 (65%), Gaps = 9/300 (3%)

Query: 1   MAAT---LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVL 57
           M      LI+GGTGYIGK+I+ AS+  GHPT+ L R    S+  K +++  FK LG  ++
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60

Query: 58  YGDLQDHESLIKAIKQVDVVISTVSRG----QIPEQAKIIAAVKEAGNVKRFLPSEFGND 113
              L DH+ L+ A+KQVDVVIS ++ G     I EQ K++ A+KEAGN+KRFLPSEFG D
Sbjct: 61  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 120

Query: 114 VDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQI-GAPAPPRE 172
            D  ++ ++P    + DK K+RRAIEA  I YTYVS N FAGYF  +LAQ+ G   PPR+
Sbjct: 121 PDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRD 180

Query: 173 KVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKI 232
           KV I+GDGN   ++  EDD+ TYTI SID P+TLNKT+YIRPP N+ S  E++ +WE   
Sbjct: 181 KVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLS 240

Query: 233 GKTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
            + L+K Y++ +  L D++D      ++    Y  F +GD  NFEI   + +EA++LYPE
Sbjct: 241 EQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEI-GPNAIEATKLYPE 299

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  315 bits (808), Expect = e-108
 Identities = 122/289 (42%), Positives = 177/289 (61%), Gaps = 3/289 (1%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVR-ESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
           +I GGTGYIGK ++ AS+   HPTF   R  +  S P   +L E F+++GV ++ G++++
Sbjct: 8   IIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE 67

Query: 64  HESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEP 123
           HE ++  +KQVD+VIS +    I  Q  II A+K AGN+KRFLPS+FG + DR    + P
Sbjct: 68  HEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRI-KPLPP 126

Query: 124 AKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG 183
            +S    K  IRRAIEA  + YTYVS NCF  YF+  L          + + I+G G   
Sbjct: 127 FESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETK 186

Query: 184 AVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE 243
            V N E+DIA YTI     PR  N+ +  RPP N+ S NEL++LWE K G + +K ++ +
Sbjct: 187 FVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPD 246

Query: 244 EKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           E+L++  Q+ P P N+ ++I ++ FVKGD  ++E+     +EAS LYPE
Sbjct: 247 EQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEM-RKDDIEASNLYPE 294

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  310 bits (794), Expect = e-105
 Identities = 112/290 (38%), Positives = 173/290 (59%), Gaps = 4/290 (1%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LI G TG+IG+ +  AS+ A  PT+ L R    S P K K+ +  ++ G  ++YG + + 
Sbjct: 14  LIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVYGLINEQ 72

Query: 65  ESLIKAIKQ--VDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVE 122
           E++ K +K+  +D+V+STV    I +Q  ++ A+K  G +KRFLPSEFG+DV+R+ + VE
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRA-DPVE 131

Query: 123 PAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNA 182
           P  + Y +K ++R+ +E  GI +TY+ CN  A +            PP +   I+GDGN 
Sbjct: 132 PGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNV 191

Query: 183 GAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA 242
            A +    DI  +T+ ++D  RTLNK+++ RP  N  + NEL ++WE KIG+TL +  V 
Sbjct: 192 KAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVT 251

Query: 243 EEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           E+ LL    +  IP +V+ A T+  F+KG Q NF I+    VE + LYPE
Sbjct: 252 EDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPE 301

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  302 bits (776), Expect = e-103
 Identities = 121/288 (42%), Positives = 181/288 (62%), Gaps = 9/288 (3%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LI GGTGYIG  +++ S+K GHPT+   R +++       L++ F++LG  ++ G+L +H
Sbjct: 15  LIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTT----LLDEFQSLGAIIVKGELDEH 70

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPA 124
           E L++ +K+VDVVIS ++  QI +Q KI+ A+K AGN+KRFLPS+FG + DR  N + P 
Sbjct: 71  EKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRI-NALPPF 129

Query: 125 KSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA 184
           ++    K  IRRAIE   I YTYVS NCFA YF+  L +   P  P++++T++G G A  
Sbjct: 130 EALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLR---PYDPKDEITVYGTGEAKF 186

Query: 185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE 244
             N E DI  YTI     PR LN+ +  RP  N+ +  EL++ WE KIGK  +K +V EE
Sbjct: 187 AMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEE 246

Query: 245 KLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           +++   ++ P P N+ +AI +  F+ G   +++    + VEAS LYPE
Sbjct: 247 EIVALTKELPEPENIPIAILHCLFIDGATMSYDF-KENDVEASTLYPE 293

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 99.7 bits (249), Expect = 2e-25
 Identities = 39/217 (17%), Positives = 73/217 (33%), Gaps = 31/217 (14%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            I G TG  G   L  +V+AG+    LVR     D  +   +        +V+ GD+   
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVR-----DSSR---LPSEGPRPAHVVVGDVLQA 58

Query: 65  ESLIKAIKQVDVVISTV--SRGQIPEQ------AKIIAAVKEAGNVKRFLP-SEFGNDVD 115
             + K +   D VI  +       P          I+AA+K  G V + +  +     + 
Sbjct: 59  ADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAF-LLW 116

Query: 116 RSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT 175
               V    ++   D I++ + +   G++Y  V       +            P     T
Sbjct: 117 DPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVM----PPHI--------GDQPLTGAYT 164

Query: 176 IFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI 212
           +  DG   +    + D+  + +  +        + Y 
Sbjct: 165 VTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 37/218 (16%), Positives = 69/218 (31%), Gaps = 36/218 (16%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           L++G  G + + +L      GH   A+VR     +  +G   E+ +    +++  +L++ 
Sbjct: 25  LVVGANGKVARYLLSELKNKGHEPVAMVR-----NEEQGP--ELRERGASDIVVANLEE- 76

Query: 65  ESLIKAIKQVDVVISTV-SRGQIPEQA----------KIIAAVKEAGNVKRF-LPSEFGN 112
                A   +D V+    S                  K I   ++ G +KRF + S  G 
Sbjct: 77  -DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVG- 133

Query: 113 DVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPRE 172
                       +     K      ++   + YT V     +                  
Sbjct: 134 -TVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSN------------EESTG 180

Query: 173 KVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL 210
           KVT+    +         D+A      +D   T+ KT 
Sbjct: 181 KVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTF 218

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 79.8 bits (197), Expect = 7e-18
 Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 16/155 (10%)

Query: 1   MAATLIIGGTGYIGKKIL-EASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG 59
           M   LI+G  G I + ++ + + K         R      P K             ++ G
Sbjct: 23  MKNVLILGAGGQIARHVINQLADKQTIKQTLFAR-----QPAKIHKPY---PTNSQIIMG 74

Query: 60  DLQDHESLIKAIKQVDVVISTVSRGQIPEQAK-IIAAVKEAGNVKRF-----LPSEFGND 113
           D+ +H +L +A++  D+V + ++   +  QA  +IAA+K    VKR      L       
Sbjct: 75  DVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVP 133

Query: 114 VDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYV 148
               +              +   AIEA G++YT +
Sbjct: 134 GKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTIL 168

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 45/267 (16%), Positives = 77/267 (28%), Gaps = 51/267 (19%)

Query: 1   MAATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVNVLY 58
           +   L+ G +G  G+ + +   +         LVR +   + + G           +V  
Sbjct: 4   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG---------EADVFI 54

Query: 59  GDLQDHESLIKAIKQVDVVISTVS----------------------RGQIPEQ------A 90
           GD+ D +S+  A + +D ++   S                       GQ PEQ       
Sbjct: 55  GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114

Query: 91  KIIAAVKEAGNVKRF-LPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVS 149
             I A K AG VK   +    G              +    K K  + +   G  YT + 
Sbjct: 115 NQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 173

Query: 150 CNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKT 209
                G                 K       +   V     D+A   I ++      NK 
Sbjct: 174 A---GGLLDKEGGVR---ELLVGKDDELLQTDTKTVP--RADVAEVCIQALLFEEAKNKA 225

Query: 210 LYI--RPPGNVYSFNELVTLWENKIGK 234
             +  +P G      +   L+     +
Sbjct: 226 FDLGSKPEGTSTPTKDFKALFSQVTSR 252

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 75.4 bits (185), Expect = 2e-16
 Identities = 31/220 (14%), Positives = 60/220 (27%), Gaps = 24/220 (10%)

Query: 5   LIIGGTGYIGKKILE-ASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
            I+G  G I + +                R             EI  +  V V+ G  Q+
Sbjct: 9   TILGAAGQIAQXLTATLLTYTDMHITLYGR-----QLKTRIPPEIIDHERVTVIEGSFQN 63

Query: 64  HESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGND-----VDRSQ 118
              L +A+   +VV          + A I+ A+      +    S  G            
Sbjct: 64  PGXLEQAVTNAEVVFVGAM-ESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKW 122

Query: 119 NVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFG 178
                  S    + + R  +    + YT +       +          P     ++   G
Sbjct: 123 TFDNLPISYVQGERQARNVLRESNLNYTILR----LTWL------YNDPEXTDYELIPEG 172

Query: 179 DGNAGAVYNKED--DIATYTINSIDGPRTLNKTLYIRPPG 216
                A  ++E         +++ D       ++ +  PG
Sbjct: 173 AQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 75.0 bits (185), Expect = 8e-16
 Identities = 59/284 (20%), Positives = 100/284 (35%), Gaps = 40/284 (14%)

Query: 5   LIIGGTGYIGKKILEASVK--AGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ 62
            + G TG +G  +++  +K        A+VR     +  K        + GV V +GD  
Sbjct: 4   AVTGATGQLGGLVIQHLLKKVPASQIIAIVR-----NVEKAST---LADQGVEVRHGDYN 55

Query: 63  DHESLIKAIKQVDVV--ISTVSRGQ---IPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRS 117
             ESL KA   V  +  IS         I + A ++ A ++AG VK              
Sbjct: 56  QPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG-VKHI--------AYTG 106

Query: 118 QNVVEPAKSAYA-DKIKIRRAIEAEGIQYTYVSCNCFA----GYFLPTLAQIGAPAPPRE 172
               E +    A   +    AI    I YT++    +        L    + GA      
Sbjct: 107 YAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTN-- 164

Query: 173 KVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKI 232
                G G   +V    +++A      +      NKT  +      ++F+EL  +     
Sbjct: 165 ----AGSGIVNSV--TRNELALAAATVLTEEGHENKTYNLVSN-QPWTFDELAQILSEVS 217

Query: 233 GKTLEKTYVAEEKLLKDIQDAPIPLNV--LLAITYATFVKGDQA 274
           GK +    V+ E+    + +A +P     + A  Y    KG+ +
Sbjct: 218 GKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEAS 261

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 40/253 (15%), Positives = 82/253 (32%), Gaps = 21/253 (8%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTF-ALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
           ++ GGTG  G  +    ++ G      + R     +P K    E+ +  G  V+ GD  D
Sbjct: 9   VVFGGTGAQGGSVARTLLEDGTFKVRVVTR-----NPRKKAAKEL-RLQGAEVVQGDQDD 62

Query: 64  HESLIKAIKQVDVVIS------TVSRGQIPEQAK-IIAAVKEAGNVKRFLPSEFGNDVDR 116
              +  A+              + S+ Q  +Q K +    +  G +   + S   N    
Sbjct: 63  QVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL 121

Query: 117 SQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI 176
           +      A + +  K ++       G+  T V   C+    L       AP   +  +  
Sbjct: 122 TAG--RLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPD-GKSYLLS 178

Query: 177 FGDGNAGAVYNKEDDIATYTINSIDGP-RTLNKTLYIRPPGNVYSFNELVTLWENKIGKT 235
              G+         D+    ++ +  P + + + + +      ++  E   L      K 
Sbjct: 179 LPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGL--STCRHTAEEYAALLTKHTRKV 236

Query: 236 LEKTYVAEEKLLK 248
           +    +  E   K
Sbjct: 237 VHDAKMTPEDYEK 249

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 61/281 (21%), Positives = 99/281 (35%), Gaps = 39/281 (13%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTF-ALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
           ++ G TG++G  I   ++      F   VR     +  K           V+V   D  +
Sbjct: 4   MLTGATGHLGTHITNQAIANHIDHFHIGVR-----NVEKVPD---DWRGKVSVRQLDYFN 55

Query: 64  HESLIKAIKQVDVV--ISTVSRG---QIPEQAKIIAAVKEAGNVKRF-LPSEFGNDVDRS 117
            ES+++A K +D V  I ++      +IPE   ++ A K++G V        + +  +  
Sbjct: 56  QESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHN-- 112

Query: 118 QNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGA----PAPPREK 173
            N    +           R +   GI YTYV    +     P L ++        P    
Sbjct: 113 -NPFHMS----PYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYP---- 163

Query: 174 VTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG 233
               GDG    +    +DIA   I  I  P T  K   +      Y   EL  +     G
Sbjct: 164 ---AGDGRINYIT--RNDIARGVIAIIKNPDTWGKRYLLSGYS--YDMKELAAILSEASG 216

Query: 234 KTLEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQA 274
             ++   V+ E    ++ D P     LLA  Y    +G   
Sbjct: 217 TEIKYEPVSLET-FAEMYDEPKGFGALLASMYHAGARGLLD 256

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 70.5 bits (173), Expect = 1e-14
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           ++IG +G++G  +L  ++  G    A+VR      P K K+    +N  + V   D+   
Sbjct: 8   VLIGASGFVGSALLNEALNRGFEVTAVVR-----HPEKIKI----ENEHLKVKKADVSSL 58

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQ---------AKIIAAVKEAGNVKRFL 106
           + + +  K  D VIS  + G                II  VK+AG V RFL
Sbjct: 59  DEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFL 108

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 42/220 (19%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL-QD 63
            I+G TG +GK +L++     +  +A  R        +           V  ++ D+   
Sbjct: 4   FIVGSTGRVGKSLLKSLSTTDYQIYAGAR-----KVEQVPQYN-----NVKAVHFDVDWT 53

Query: 64  HESLIKAIKQVDVVISTV-SRGQIPEQ------AKIIAAVKEAGNVKRFLP-SEFGNDVD 115
            E + K +  +D +I+   S G+   +       K++ A ++A  VKRF+  S       
Sbjct: 54  PEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIF--SL 110

Query: 116 RSQNVVEPAKSAYADKIKIRRA-----IEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPP 170
           + +  +     A  D    +        +   + YT +            L +       
Sbjct: 111 QPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQP--------GALTE----EEA 158

Query: 171 REKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL 210
              + I  + +A        D+A      +    ++ K +
Sbjct: 159 TGLIDINDEVSASNTI---GDVADTIKELVMTDHSIGKVI 195

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 55/282 (19%), Positives = 99/282 (35%), Gaps = 39/282 (13%)

Query: 5   LIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ 62
            I G TG +G  ++E+ +K        A+VR     +P K +        G+ V   D  
Sbjct: 3   AITGATGQLGHYVIESLMKTVPASQIVAIVR-----NPAKAQA---LAAQGITVRQADYG 54

Query: 63  DHESLIKAIKQVDVV--ISTVSRGQIPEQAK-IIAAVKEAGNVKRFLPSEFGNDVDRSQN 119
           D  +L  A++ V+ +  IS+   GQ   Q + +I A K AG VK             S  
Sbjct: 55  DEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAG-VKFI--------AYTSLL 105

Query: 120 VVEPAKSAYA-DKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGA----PAPPREKV 174
             + +    A + I+  + +   GI YT +    ++  +L +                  
Sbjct: 106 HADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA----- 160

Query: 175 TIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGK 234
              GDG   +      D A      I       K   +    + ++  +L      + GK
Sbjct: 161 --AGDGKIASA--TRADYAAAAARVISEAGHEGKVYELAGD-SAWTLTQLAAELTKQSGK 215

Query: 235 TLEKTYVAEEKLLKDIQDAPIPLNV--LLAITYATFVKGDQA 274
            +    ++E      ++   +P  +  +LA +     KG   
Sbjct: 216 QVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLF 257

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 69.5 bits (170), Expect = 1e-13
 Identities = 38/258 (14%), Positives = 79/258 (30%), Gaps = 24/258 (9%)

Query: 1   MAAT----LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNV 56
           MA       ++G TG  G  ++  +   GH   A V              E+     V +
Sbjct: 1   MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-----SLKGLIAEELQAIPNVTL 55

Query: 57  LYGDLQDHESLIK-AIKQVDVV--ISTVSRGQIPEQAK-IIAAVKEAGNVKRFLPSEFGN 112
             G L ++  L+    +   +    +T   G      K +  A K AG ++ ++ S   +
Sbjct: 56  FQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115

Query: 113 DVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPRE 172
                     PA   +A K  +   +   G+  T+V    +   F      +       +
Sbjct: 116 -HSLYGP--WPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPD 172

Query: 173 KVTIFGDGNAG----AVYNKEDDIATYTINSI-DGP-RTLNKTLYIRPPGNVYSFNELVT 226
               +             + E D+    +    DGP +     + +       S  ++  
Sbjct: 173 GTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIAL--TFETLSPVQVCA 230

Query: 227 LWENKIGKTLEKTYVAEE 244
            +   + + +    V + 
Sbjct: 231 AFSRALNRRVTYVQVPKV 248

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 64.2 bits (157), Expect = 5e-12
 Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 22/114 (19%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            ++G TG +G     A   AGH    + R S+    +          L       ++ DH
Sbjct: 17  AVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY--------LEPECRVAEMLDH 68

Query: 65  ESLIKAIKQVDVVI---STVSRGQIPEQ----------AKIIAAVKEAGNVKRF 105
             L +A++ +D VI             Q              AA  +A  V R 
Sbjct: 69  AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRI 121

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 60.4 bits (146), Expect = 5e-11
 Identities = 26/228 (11%), Positives = 60/228 (26%), Gaps = 39/228 (17%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            ++G TG  G  I+  + + GH   A+VR     DP K         LG  V     +  
Sbjct: 4   AVLGATGRAGSAIVAEARRRGHEVLAVVR-----DPQK-----AADRLGATVATLVKEPL 53

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQ--------AKIIAAVKEAGNVKRFL---------P 107
                 +  VD V+  +S      +          +++ ++ +                P
Sbjct: 54  VLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMP 112

Query: 108 SEFGNDVDRSQNVVEPAKSAYADKIKIRRAI---EAEGIQYTYVSCNCFAGYFLPTLAQI 164
                 +                  +            + +  +S +        T    
Sbjct: 113 GADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVA 172

Query: 165 GAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI 212
           G               +  +      ++A   ++ ++ P  +   + +
Sbjct: 173 GKDTLLV-------GEDGQSHITTG-NMALAILDQLEHPTAIRDRIVV 212

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 58.1 bits (140), Expect = 3e-10
 Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 39/227 (17%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            IIG TG  G +ILE +   GH   A+VR +                  +N+L  D+ D 
Sbjct: 4   GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHK---------DINILQKDIFD- 53

Query: 65  ESLIKAIKQVDVVISTVSRGQIPEQ------AKIIAAVKEAGNVKRFL------------ 106
              +  +   +VV+          +        +I+ +       R L            
Sbjct: 54  -LTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDE 111

Query: 107 -PSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIG 165
             +         +    P   A A +++  ++       +TY+S             + G
Sbjct: 112 DGNTLLESKGLREAPYYPTARAQAKQLEHLKS-HQAEFSWTYISP----SAMFEPGERTG 166

Query: 166 APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI 212
                ++ +    DGN+       +D A   ++ I+ P  LN+   +
Sbjct: 167 DYQIGKDHLLFGSDGNSFISM---EDYAIAVLDEIERPNHLNEHFTV 210

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 1e-06
 Identities = 34/290 (11%), Positives = 78/290 (26%), Gaps = 84/290 (28%)

Query: 5   LIIGGTGYIGKKILEASVKAGHP------------TFALVRESTASDPVKGKLIEIFKNL 52
           ++I G    GK  +   V   +                              ++E+ + L
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET-------VLEMLQKL 205

Query: 53  GVNVLYGDLQDHESLIKAIKQVDVVISTVSRGQIPEQAK----IIAAVKEAGNVKRFLPS 108
              +        +       ++  + + + R    +  +    ++  V+ A     F   
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF--- 262

Query: 109 EFGNDVD-------RSQNVVEPAKSAYADKIKIRRAI------EAEGIQYTYVSCNCFAG 155
               ++        R + V +   +A    I +          E + +   Y+ C     
Sbjct: 263 ----NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD- 317

Query: 156 YFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPP 215
             LP       P     +++I  +                  +  DG  T +   +    
Sbjct: 318 --LPREVLTTNPR----RLSIIAE------------------SIRDGLATWDNWKH---- 349

Query: 216 GNVYSFNELVTLWENKIGKTLEKTYVAEEK-LLKDI----QDAPIPLNVL 260
               + ++L       I  +L     AE + +   +      A IP  +L
Sbjct: 350 ---VNCDKL----TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 76/251 (30%)

Query: 43  GKLIEIFKNLGVNVLYGDLQDHESLIKAI---KQVDVVISTVSRGQIPEQA-KIIAAVKE 98
             ++ +F++  V+    D +D + + K+I   +++D +I +           ++   +  
Sbjct: 19  KDILSVFEDAFVDNF--DCKDVQDMPKSILSKEEIDHIIMSKDA---VSGTLRLFWTLLS 73

Query: 99  AGN--VKRFLPSEFGNDVDRSQNVVEPAKSAY---ADKIKIRRAIEAEGIQYTYVSC--- 150
                V++F+      +V R  N        Y      IK     +   +   Y+     
Sbjct: 74  KQEEMVQKFV-----EEVLR-IN--------YKFLMSPIK-TEQRQPSMMTRMYIEQRDR 118

Query: 151 -----NCFAGYFLPTLAQIGA------PAPPREKVTIFGDGNAGAVYNKEDDIATYTINS 199
                  FA Y +  L              P + V I G   +G    K       T  +
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG----K-------TWVA 167

Query: 200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE--EKLLKDI------- 250
           +D     +  +  +    ++        W N +        V E  +KLL  I       
Sbjct: 168 LDVCL--SYKVQCKMDFKIF--------WLN-LKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 251 --QDAPIPLNV 259
               + I L +
Sbjct: 217 SDHSSNIKLRI 227

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 14/79 (17%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPT-----FALVRESTASDPVKGKLIEIFKNLGVNVLYG 59
          LI+G TG IG  + E    A  P      + + R +  +           ++  +N +  
Sbjct: 5  LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH---------EDNPINYVQC 55

Query: 60 DLQDHESLIKAIKQVDVVI 78
          D+ D +     +  +  V 
Sbjct: 56 DISDPDDSQAKLSPLTDVT 74

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 40.9 bits (96), Expect = 5e-05
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 10/100 (10%)

Query: 1   MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGD 60
           M   + + G G IG+ I      + + +  +     A+       + +   +GV     D
Sbjct: 4   MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAA-------LAVLNRMGVATKQVD 56

Query: 61  LQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAG 100
            +D   L KA+   D VIS            I  A K AG
Sbjct: 57  AKDEAGLAKALGGFDAVISAA---PFFLTPIIAKAAKAAG 93

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           IIG  G +G+K+ +  VK G      V + T  D  + +    F    V+    DL   
Sbjct: 18 AIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSG-AVDARAADLSAP 76

Query: 65 ESLIKAIK-QVDVVI 78
              K ++ + DV+ 
Sbjct: 77 GEAEKLVEARPDVIF 91

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 11/78 (14%)

Query: 1  MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGD 60
          +   L+ G  G +G  I        H           +     +++             D
Sbjct: 2  LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVA-----------CD 50

Query: 61 LQDHESLIKAIKQVDVVI 78
          L D +++   +K  D +I
Sbjct: 51 LADAQAVHDLVKDCDGII 68

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 22/113 (19%)

Query: 4   TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD 63
            ++I G G +G ++       GH    L R S    P            GV  L  D+  
Sbjct: 5   KILIAGCGDLGLELARRLTAQGHEVTGLRR-SAQPMP-----------AGVQTLIADVTR 52

Query: 64  HESLIKAIK-QVDVVISTVSRGQI---------PEQAKIIAAVKEAGNVKRFL 106
            ++L   +  + ++++  V+  +           E  +   +  E   ++   
Sbjct: 53  PDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVF 105

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 21/115 (18%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPT--FALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ 62
            I+G +G  G+ +L+  ++ G  +    + R     D    K +             D +
Sbjct: 22  FILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN--------QEVVDFE 73

Query: 63  DHESLIKAIKQVDVVISTV--SRGQIPEQA---------KIIAAVKEAGNVKRFL 106
             +    A +  DV    +  +RG+   +             A + +AG  K F 
Sbjct: 74  KLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFN 128

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 6/81 (7%)

Query: 1  MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGD 60
          M   +++ G+G++ + +++                T +         + K  G   +  D
Sbjct: 22 MGKNVLLLGSGFVAQPVIDTLAANDD------INVTVACRTLANAQALAKPSGSKAISLD 75

Query: 61 LQDHESLIKAIKQVDVVISTV 81
          + D  +L K +   DVVIS +
Sbjct: 76 VTDDSALDKVLADNDVVISLI 96

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 17/116 (14%), Positives = 31/116 (26%), Gaps = 23/116 (19%)

Query: 1   MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGD 60
           M   L+ G  G +G+ + E                        + ++            D
Sbjct: 3   MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQ-----------CD 51

Query: 61  LQDHESLIKAIKQVDVVI-----STVSRGQIPEQAKIIA------AVKEAGNVKRF 105
           L D  ++   +   D ++     S     +   Q  II       A +  G   R 
Sbjct: 52  LADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRI 106

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 39.1 bits (91), Expect = 9e-04
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 16/109 (14%)

Query: 1   MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGD 60
           M  TL+  G GY  + +  A    G       R     +P +   +E  +  G   L   
Sbjct: 4   MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSR-----NPDQ---MEAIRASGAEPLLWP 55

Query: 61  LQDHESLIKAIKQVDVVISTV---SRGQIPEQAKIIAAVKEAGNVKRFL 106
            ++      ++  V  ++ +    S G     A        A   +   
Sbjct: 56  GEE-----PSLDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVG 99

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	292
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	100.0
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	100.0
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	100.0
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	100.0
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.98
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.98
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.98
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.98
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.98
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.98
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.98
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.98
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.97
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.97
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.97
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.97
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.97
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.97
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.97
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.96
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.96
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.96
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.96
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.96
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.96
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.96
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.96
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.96
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.95
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.95
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.95
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.95
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.95
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.95
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.94
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.94
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.94
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.93
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.88
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.88
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.87
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.85
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.85
1spx_A	278	Short-chain reductase family member (5L265); paral	99.85
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.84
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.84
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.83
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.83
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.83
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.83
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.83
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.83
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.83
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.83
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.83
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.82
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.82
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.82
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.82
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.82
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.82
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.82
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.82
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.82
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.82
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.82
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.82
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.82
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.82
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.82
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.81
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.81
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.81
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.81
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.81
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.81
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.81
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.81
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.81
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.81
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.81
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.81
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.8
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.8
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.8
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.8
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.8
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.8
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.8
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.8
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.8
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.8
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.8
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.8
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.8
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.79
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.79
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.79
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.79
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.79
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.79
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.79
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.79
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.79
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.79
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.79
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.79
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.79
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.79
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.79
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.79
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.79
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.79
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.78
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.78
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.78
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.78
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.78
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.78
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.78
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.78
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.78
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.78
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.77
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.77
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.77
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.77
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.77
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.77
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.77
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.77
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.77
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.77
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.77
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.77
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.77
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.77
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.77
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.77
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.77
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.77
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.76
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.76
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.76
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.76
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.76
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.76
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.76
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.76
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.76
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.76
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.76
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.76
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.76
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.76
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.76
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.76
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.76
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.76
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.76
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.75
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.75
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.75
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.75
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.75
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.75
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.75
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.75
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.75
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.75
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.74
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.74
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.74
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.74
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.74
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.74
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.74
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.74
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.73
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.73
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.73
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.73
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.73
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.73
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.73
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.73
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.73
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.73
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.73
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.73
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.73
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.72
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.72
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.72
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.72
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.72
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.72
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.72
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.72
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.71
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.71
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.71
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.71
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.71
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.7
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.7
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.7
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.7
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.7
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.7
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.7
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.69
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.69
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.69
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.68
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.68
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.68
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.68
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.68
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.68
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.67
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.66
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.65
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.65
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.65
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.64
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.64
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.63
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.63
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.63
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.62
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.62
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.61
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.61
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.6
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.6
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.6
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.59
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.5
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.48
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.46
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.41
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.38
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.33
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.28
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.27
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.25
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.24
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.17
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.16
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.1
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.09
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.09
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.07
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.05
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.04
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.03
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.0
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.94
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.93
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.93
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.9
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.89
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.88
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.76
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.73
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.69
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.68
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.61
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.57
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.55
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.53
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.45
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.43
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.42
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.38
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.35
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.27
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.22
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.2
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.18
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.11
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.05
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.05
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.02
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.0
1lnq_A	336	MTHK channels, potassium channel related protein;	97.93
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.88
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.85
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.85
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.83
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.81
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.8
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.77
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.76
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.76
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.75
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.74
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.74
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.74
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.73
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.72
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.72
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.7
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.69
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.69
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.69
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.67
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.66
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.66
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.65
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.63
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.62
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.61
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.6
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.6
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.59
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.59
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.59
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.58
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.57
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.57
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.57
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.55
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.55
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.53
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.51
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.5
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.48
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.48
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.47
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.47
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.46
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.45
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.45
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.45
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.44
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	97.43
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.43
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.43
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.42
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.41
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.41
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.41
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.41
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.4
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.4
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.4
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.39
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.38
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.35
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.34
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.33
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.31
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.3
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.29
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.29
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.28
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.27
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.27
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.26
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.25
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.24
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.22
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.21
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.21
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.2
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.18
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.18
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.18
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.17
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.17
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.17
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.16
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.15
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.15
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.14
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.14
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.13
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.13
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.13
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.12
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.12
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.11
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.09
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.09
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.09
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.09
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.08
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.07
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.07
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.07
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	97.07
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.06
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	97.06
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.05
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	97.05
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.05
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.05
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.05
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.05
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	97.04
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.04
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.03
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.02
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.02
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.01
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.0
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.0
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.99
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.99
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.99
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.99
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.99
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	96.98
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.98
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.97
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.97
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.96
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.96
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.95
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.95
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.95
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.95
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.95
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.94
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	96.94
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.93
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.93
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.92
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.92
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	96.92
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.92
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.91
3a06_A	376	1-deoxy-D-xylulose 5-phosphate reductoisomerase; M	96.91
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.91
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.91
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.91
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.89
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.88

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=2.7e-43  Score=305.92  Aligned_cols=288  Identities=39%  Similarity=0.695  Sum_probs=250.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+||||||||+||+++++.|++.|++|++++|+++.. +++.+.++.+...+++++.+|+.|.+++.++++  ++|+|||
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC-HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC-hhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            5899999999999999999999999999999986433 566666667777899999999999999999999  9999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceecccccc
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLP  159 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~  159 (292)
                      +++...+..+.+++++|++.+++++|++|+||....+ ..+..|...|+.+|+.+|+++++.+++++++||+.|++++.+
T Consensus        90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e-~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~  168 (346)
T 3i6i_A           90 TVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNR-ADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYY  168 (346)
T ss_dssp             CCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTT-CCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCS
T ss_pred             CCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCc-cCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEecccccccCc
Confidence            9998888999999999999977899999999976554 555566677888999999999999999999999999998776


Q ss_pred             ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          160 TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      .+..........+.+.+++++++.+++++++|+|++++.++.++...++.|++.|+++.+|++|+++.+++.+|.+.++.
T Consensus       169 ~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~  248 (346)
T 3i6i_A          169 NNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRV  248 (346)
T ss_dssp             CC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEE
T ss_pred             cccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceE
Confidence            65543323346677889999999999999999999999999998777889999887779999999999999999999999


Q ss_pred             ecCHHHHHHHHHhCCCChhhHHhhhhheeeeCCCcccccc-ccccccccccCCC
Q 039623          240 YVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEIN-TASGVEASELYPE  292 (292)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~  292 (292)
                      .+|.+++.+.+...+.|.+..+..++.++..|.+..|+.+ +. +...+++||+
T Consensus       249 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~p~  301 (346)
T 3i6i_A          249 TVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPE-DVEVTTLYPE  301 (346)
T ss_dssp             EECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTT-EEEHHHHSTT
T ss_pred             ecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCC-cccHHHhCCC
Confidence            9999999999999999999889999999999988778874 22 3667788875

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=100.00  E-value=4e-42  Score=293.78  Aligned_cols=290  Identities=62%  Similarity=0.982  Sum_probs=237.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-CCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-DPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|+||||||++|+++++.|+++|++|++++|+.+.. ++++.+.+..+...+++++.+|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            47899999999999999999999999999999985432 13444444455567999999999999999999999999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceecccccc
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLP  159 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~  159 (292)
                      +++...+..+.+++++|++.+++++||+|+||....+ ..+..|..++|.+|..+|+++++.+++++++||+.|++++.+
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~  162 (308)
T 1qyc_A           84 TVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN-VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR  162 (308)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTS-CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTT
T ss_pred             CCcchhhhhHHHHHHHHHhcCCCceEeecccccCccc-cccCCcchhHHHHHHHHHHHHHhcCCCeEEEEeceecccccc
Confidence            9998777889999999999865899999999865443 333334345669999999999999999999999999998766


Q ss_pred             ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          160 TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      .+.........++.+.++++++..+++++++|+|++++.++.++...++.|++.|+++.+|++|+++.+.+.+|.+.++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~  242 (308)
T 1qyc_A          163 SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKA  242 (308)
T ss_dssp             TTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEE
T ss_pred             ccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceE
Confidence            54432212234556778888899999999999999999999987666788999887679999999999999999999999


Q ss_pred             ecCHHHHHHHHHhCCCChhhHHhhhhheeeeCCCccccccccccccccccCCC
Q 039623          240 YVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE  292 (292)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  292 (292)
                      .+|.+++.+.+...++|.+..+..++.++..|....|..+.. .++.+++||+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~  294 (308)
T 1qyc_A          243 YVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPD  294 (308)
T ss_dssp             EECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-EEEHHHHCTT
T ss_pred             eCCHHHHHHHHhcCCCchhhHHHhhhheeecCcccccccCCc-cccHHhhCCC
Confidence            999999999999888888877777777776665545655443 3455677774

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=100.00  E-value=1.6e-41  Score=289.94  Aligned_cols=289  Identities=54%  Similarity=0.888  Sum_probs=236.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC-CCCCC-cchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRES-TASDP-VKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ||+|+||||||++|+++++.|+++|++|++++|++ +...+ ++.+.+..+...+++++.+|+.|++++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            78999999999999999999999999999999985 22112 45444445556789999999999999999999999999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceeccccc
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~  158 (292)
                      |+++...+..+.+++++|++.+++++||+|+||..... ..+..|..+.|.+|..+|+++++.+++++++||++|++++.
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~  160 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFL  160 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTS-CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEETTTTG
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEeecccccCccc-ccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEcceeecccc
Confidence            99998778899999999999865899999999865443 33333434456999999999999999999999999999877


Q ss_pred             cccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcce
Q 039623          159 PTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEK  238 (292)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  238 (292)
                      +.+..........+.+.++++++..+++++++|+|++++.++.++...++.+++.|+++.+|++|+++.+.+.+|.+.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  240 (307)
T 2gas_A          161 RNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEK  240 (307)
T ss_dssp             GGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEE
T ss_pred             ccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCce
Confidence            65543221123455677788888899999999999999999988766678899988767999999999999999999999


Q ss_pred             eecCHHHHHHHHHhCCCChhhHHhhhhheeeeCCCc-cccccccccccccccCCC
Q 039623          239 TYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQA-NFEINTASGVEASELYPE  292 (292)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~  292 (292)
                      ..+|.+++.+.+...++|.+..+..++.++..|... .|+.+..  .+.+++||+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~  293 (307)
T 2gas_A          241 TYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAKD--IEASEAYPD  293 (307)
T ss_dssp             EEECHHHHHHHHHHBCTTHHHHHHHHHHHHTSCTTCCCCCTTTE--EEHHHHCTT
T ss_pred             eecCHHHHHHHHhcCCCchhHHHHHHHHHeecCcccCCCCcCCC--cchHhhCCC
Confidence            999999999999888888887777777777766654 5555442  455778874

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-41  Score=290.44  Aligned_cols=291  Identities=48%  Similarity=0.835  Sum_probs=234.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|+||||||++|+++++.|+++|++|++++|+.+...+++.+.+..+...+++++.+|+.|++++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            47899999999999999999999999999999986543233444444455678999999999999999999999999999


Q ss_pred             CcCC----CchhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceeccc
Q 039623           81 VSRG----QIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGY  156 (292)
Q Consensus        81 a~~~----~~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~  156 (292)
                      ++..    .+..+.+++++|++.+++++||+|+||........+..|..++|.+|..+|+++++.+++++++||++|+++
T Consensus        84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilrp~~~~~~  163 (313)
T 1qyd_A           84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGY  163 (313)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHH
T ss_pred             CccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCeEEEEeceeccc
Confidence            9976    378899999999998658999999998654321223334455669999999999999999999999999998


Q ss_pred             cccccccCC-CCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          157 FLPTLAQIG-APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       157 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      +.+.+.... .....++.+.++++++..+++++++|+|++++.++.++...++.|++.|+++.+|++|+++.+.+.+|.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~  243 (313)
T 1qyd_A          164 FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQN  243 (313)
T ss_dssp             HTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCC
T ss_pred             cccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCC
Confidence            766544321 0113445666778888999999999999999999998766678899988766999999999999999999


Q ss_pred             cceeecCHHHHHHHHHhCCCChhhHHhhhhheeeeCCCccccccccccccccccCCC
Q 039623          236 LEKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE  292 (292)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  292 (292)
                      .++..+|.+++.+.+...+.|.+..+..++.++..|....|+.+.. ..+.+++||+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~  299 (313)
T 1qyd_A          244 LDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYPE  299 (313)
T ss_dssp             CEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSS-EEEHHHHCTT
T ss_pred             CceEECCHHHHHHHHhcCCCcccchhhheeeEEecccccCCCcCcc-cccHhhcCCC
Confidence            9999999999999998888888777666777776665444554432 2345677774

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=100.00  E-value=6.8e-41  Score=287.87  Aligned_cols=290  Identities=42%  Similarity=0.718  Sum_probs=233.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC-CCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRES-TASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|+||||||++|+++++.|+++|++|++++|++ +...+++.+.+..+...+++++.+|++|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            68899999999999999999999999999999985 32212344444445567899999999999999999999999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceecccccc
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLP  159 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~  159 (292)
                      +++...+..+++++++|++.+++++||+|+||....+ ..+..|....|.+|..+|+++++.+++++++||++|++++.+
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~  162 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDR-IKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVN  162 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGG-CCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHHH
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEeccccccCccc-cccCCCcchHHHHHHHHHHHHHHcCCCeEEEEeceecccccc
Confidence            9998778899999999999865899999999865443 233333233459999999999999999999999999998765


Q ss_pred             ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          160 TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      .+.........++.+..+++++..+++++++|+|++++.++.++...++.|++.|+++.+|++|+++.+.+.+|.+.++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~  242 (321)
T 3c1o_A          163 YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKV  242 (321)
T ss_dssp             HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEE
T ss_pred             ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceee
Confidence            54332111234556777888899999999999999999999987666788999887669999999999999999999999


Q ss_pred             ecCHHHHHHHHHhCCCChhhHHhhhhheeeeCCCccccccccccccccccCCC
Q 039623          240 YVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE  292 (292)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  292 (292)
                      .+|.+++.+.+...+.|.+..+..++.++..+....|..+.. .++.+++||+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  294 (321)
T 3c1o_A          243 HMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRKD-DIEASNLYPE  294 (321)
T ss_dssp             EECHHHHHHHHHHSCTTTHHHHHHHHHHHTTCTTTSSCCCSS-CEEGGGTCTT
T ss_pred             eCCHHHHHHHHhcCCCchhhhHhhhheeeeccccCCCCCCcc-cchHhhhCCC
Confidence            999999999998888888776666677776665444554332 2445677764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=100.00  E-value=2.8e-40  Score=283.69  Aligned_cols=282  Identities=43%  Similarity=0.743  Sum_probs=231.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+||||||++|+++++.|+++|++|++++|+++    .+.+.+..+...+++++.+|+.|++++.++++++|+|||++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~----~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC----SCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC----chhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            47999999999999999999999999999999843    23333344456789999999999999999999999999999


Q ss_pred             cCCCchhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceecccccccc
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTL  161 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~~~  161 (292)
                      +...+..+++++++|++.+++++||+|+||....+ ..+..|..++|.+|..+|+++++.+++++++||++|++++.+.+
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~  166 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDR-INALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYL  166 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTT-CCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEHHHHHHHH
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEEeeccccCccc-ccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceehhhhhhhh
Confidence            98777889999999999865899999999865443 23333334456999999999999999999999999999876654


Q ss_pred             ccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeec
Q 039623          162 AQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYV  241 (292)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~  241 (292)
                      ....   ..++.+.++++++..+++++++|+|++++.++.++...++.+++.|+++.+|++|+++.+++.+|.+.++..+
T Consensus       167 ~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~  243 (318)
T 2r6j_A          167 LRPY---DPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHV  243 (318)
T ss_dssp             HCTT---CCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEE
T ss_pred             cccc---CCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeec
Confidence            4322   3455677788888999999999999999999998766678899988767999999999999999999999999


Q ss_pred             CHHHHHHHHHhCCCChhhHHhhhhheeeeCCCccccccccccccccccCCC
Q 039623          242 AEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE  292 (292)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  292 (292)
                      |.+++.+.+...++|....+..++.+|..|....|..+.. ....+++||+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~  293 (318)
T 2r6j_A          244 PEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPE  293 (318)
T ss_dssp             CHHHHHHHHHHSCTTTHHHHHHHHHHHTSCTTTSSCCCTT-CEEGGGTCTT
T ss_pred             CHHHHHHHHhcCCCcchhhhheeeeEEecCCCCCCCcccc-cchHHHhCCC
Confidence            9999999988888888877777777777665444554332 2345677763

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=5.6e-34  Score=241.20  Aligned_cols=232  Identities=22%  Similarity=0.262  Sum_probs=190.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |+||||||||+||+++++.|.+. |++|++++|+     +++.   ..+...+++++.+|++|++++.++++++|+|||+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~-----~~~~---~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~   72 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRN-----VEKV---PDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFI   72 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS-----GGGS---CGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC-----HHHH---HHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            68999999999999999999998 8999999998     4443   2234678999999999999999999999999999


Q ss_pred             CcCCC-----chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceec
Q 039623           81 VSRGQ-----IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFA  154 (292)
Q Consensus        81 a~~~~-----~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~  154 (292)
                      ++...     +..+++++++|++.+ ++++|+ |+++.....       ...+...+..+|+.++..+++++++||+.++
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~-------~~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~  144 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNN-------PFHMSPYFGYASRLLSTSGIDYTYVRMAMYM  144 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCSTTC-------CSTTHHHHHHHHHHHHHHCCEEEEEEECEES
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCCCC-------CCccchhHHHHHHHHHHcCCCEEEEeccccc
Confidence            99765     678999999999999 999998 777643322       1122224457888888899999999999999


Q ss_pred             cccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          155 GYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                      +++...+...    . ......++.+++.+++++++|+|++++.++.++...+++|++. +. .+|+.|+++.+.+.+|.
T Consensus       145 ~~~~~~~~~~----~-~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~-~~s~~e~~~~~~~~~g~  217 (289)
T 3e48_A          145 DPLKPYLPEL----M-NMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GY-SYDMKELAAILSEASGT  217 (289)
T ss_dssp             TTHHHHHHHH----H-HHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CE-EEEHHHHHHHHHHHHTS
T ss_pred             cccHHHHHHH----H-HCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CC-cCCHHHHHHHHHHHHCC
Confidence            9865433221    1 1223445667889999999999999999999876668899998 54 99999999999999999


Q ss_pred             CcceeecCHHHHHHHHHh-CCCC
Q 039623          235 TLEKTYVAEEKLLKDIQD-APIP  256 (292)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~-~~~~  256 (292)
                      ++++..+|.+++.+.+.. .+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~p~~~~  240 (289)
T 3e48_A          218 EIKYEPVSLETFAEMYDEPKGFG  240 (289)
T ss_dssp             CCEECCCCHHHHHHHTCCSTTHH
T ss_pred             ceeEEeCCHHHHHHHhcCCccHH
Confidence            999999999999988876 4443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.6e-33  Score=239.57  Aligned_cols=225  Identities=16%  Similarity=0.198  Sum_probs=181.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|||||||||||++|+++|+++|++|++++|++.     +.+ +     .+++++.+|++ .+++.++++++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~-~-----~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~   69 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-----NKA-I-----NDYEYRVSDYT-LEDLINQLNDVDAVVHL   69 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC-----ccc-C-----CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence            378999999999999999999999999999999822     221 1     28999999999 99999999999999999


Q ss_pred             CcCCC-----------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc---CCccCCCCcchHHHHHHHHHHHHH--
Q 039623           81 VSRGQ-----------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR---SQNVVEPAKSAYADKIKIRRAIEA--  140 (292)
Q Consensus        81 a~~~~-----------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K~~~e~~~~~--  140 (292)
                      |+...           +.++.+++++|++.+ ++++|+ |   +||.....   ++.+..|.+.|..+|+.+|++++.  
T Consensus        70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  148 (311)
T 3m2p_A           70 AATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYS  148 (311)
T ss_dssp             CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Confidence            99753           678999999999998 999987 3   36543211   144555666677799999999886  


Q ss_pred             --cCccEEEEecceecccccc------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEE
Q 039623          141 --EGIQYTYVSCNCFAGYFLP------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI  212 (292)
Q Consensus       141 --~~~~~~~ir~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  212 (292)
                        .+++++++||+.++|....      .+....   ..+..+.+++++++.++++|++|+|++++.+++++. .+++|++
T Consensus       149 ~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i  224 (311)
T 3m2p_A          149 RKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQA---FHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNI  224 (311)
T ss_dssp             HHSCCEEEEEEECEEECSCC--CCHHHHHHHHH---HTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEE
T ss_pred             HHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHH---HcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEe
Confidence              6899999999999886433      122111   346667778889999999999999999999999875 6789999


Q ss_pred             cCCCccccHHHHHHHHHHHhCCCcceeecCH
Q 039623          213 RPPGNVYSFNELVTLWENKIGKTLEKTYVAE  243 (292)
Q Consensus       213 ~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  243 (292)
                      +++. .+|+.|+++.+.+.+|.+..+...+.
T Consensus       225 ~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~  254 (311)
T 3m2p_A          225 GSGD-ALTNYEVANTINNAFGNKDNLLVKNP  254 (311)
T ss_dssp             CCSC-EECHHHHHHHHHHHTTCTTCEEECSS
T ss_pred             CCCC-cccHHHHHHHHHHHhCCCCcceecCC
Confidence            8766 89999999999999998877666554

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.9e-33  Score=243.14  Aligned_cols=229  Identities=19%  Similarity=0.194  Sum_probs=180.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh----cCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK----NLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      ||+|||||||||||++|++.|+++|++|++++|+.... .+..+.+....    ..+++++.+|+.|.+++.++++++|+
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGH-QYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCc-hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            37899999999999999999999999999999985432 22222211110    16899999999999999999999999


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccCCCCcchHHHHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVVEPAKSAYADKIKI  134 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~~~~~~~~~~K~~~  134 (292)
                      |||+|+...               +.++.+++++|++.+ +++||+ |   +||......   +.+..|.+.|..+|+.+
T Consensus       104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  182 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN  182 (351)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence            999999743               678999999999998 999987 3   465433211   44455666677799999


Q ss_pred             HHHHHH----cCccEEEEecceeccccccc----------cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLPT----------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      |++++.    .+++++++||+.++|.....          +...   ...+..+.+++++++.++++|++|+|++++.++
T Consensus       183 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~  259 (351)
T 3ruf_A          183 EIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAA---MLKGDDVYINGDGETSRDFCYIDNVIQMNILSA  259 (351)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHH---HHHTCCCEEESSSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHH---HHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence            998874    58999999999998864321          1111   134566778889999999999999999999999


Q ss_pred             cC-CcCCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          201 DG-PRTLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       201 ~~-~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      .. +...+++||++++. .+|++|+++.+.+.+|.+
T Consensus       260 ~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~  294 (351)
T 3ruf_A          260 LAKDSAKDNIYNVAVGD-RTTLNELSGYIYDELNLI  294 (351)
T ss_dssp             TCCGGGCSEEEEESCSC-CEEHHHHHHHHHHHHHTT
T ss_pred             hhccccCCCEEEeCCCC-cccHHHHHHHHHHHhCcc
Confidence            87 34567899998766 999999999999999873

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=5.8e-33  Score=234.66  Aligned_cols=235  Identities=20%  Similarity=0.267  Sum_probs=189.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+|||||||||||+++++.|+++  |++|++++|++     ++.+   .+...+++++.+|++|++++.++++++|+|||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~-----~~~~---~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNV-----EKAS---TLADQGVEVRHGDYNQPESLQKAFAGVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCT-----TTTH---HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCH-----HHHh---HHhhcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence            68999999999999999999998  99999999983     3332   23346899999999999999999999999999


Q ss_pred             cCcCCC-----chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEeccee
Q 039623           80 TVSRGQ-----IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCF  153 (292)
Q Consensus        80 ~a~~~~-----~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~  153 (292)
                      +++...     +.++.+++++|++.+ ++++|+ |+.+.. ..       ..+|..+|..+|+++++.+++++++||+.+
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~~-------~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~  143 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAE-ES-------IIPLAHVHLATEYAIRTTNIPYTFLRNALY  143 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEETTGG-GC-------CSTHHHHHHHHHHHHHHTTCCEEEEEECCB
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-CC-------CCchHHHHHHHHHHHHHcCCCeEEEECCEe
Confidence            998642     678999999999998 999988 444321 11       235666999999999999999999999999


Q ss_pred             ccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          154 AGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      +++....+....   ...+.. ..+.+++.++++|++|+|++++.+++++...+++|++.++. .+|++|+++.+.+.+|
T Consensus       144 ~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~-~~s~~e~~~~i~~~~g  218 (287)
T 2jl1_A          144 TDFFVNEGLRAS---TESGAI-VTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQ-PWTFDELAQILSEVSG  218 (287)
T ss_dssp             HHHHSSGGGHHH---HHHTEE-EESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSS-CBCHHHHHHHHHHHHS
T ss_pred             ccccchhhHHHH---hhCCce-eccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCC-cCCHHHHHHHHHHHHC
Confidence            987633222110   112233 34556778999999999999999998865567889998665 8999999999999999


Q ss_pred             CCcceeecCHHHHHHHHHhCCCChh
Q 039623          234 KTLEKTYVAEEKLLKDIQDAPIPLN  258 (292)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~  258 (292)
                      .+.++..+|.+.+...+...+.|..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T 2jl1_A          219 KKVVHQPVSFEEEKNFLVNAGVPEP  243 (287)
T ss_dssp             SCCEEEECCHHHHHHHHHHTTCCHH
T ss_pred             CcceEEeCCHHHHHHHHHhCCCCHH
Confidence            9999999998888776665566654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=100.00  E-value=1.2e-32  Score=234.26  Aligned_cols=238  Identities=14%  Similarity=0.188  Sum_probs=186.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |+|+||||||++|+++++.|+++| ++|++++|++     ++... ..+...+++++.+|+.|++++.++++++|+|||+
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~-----~~~~~-~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   79 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP-----RKKAA-KELRLQGAEVVQGDQDDQVIMELALNGAYATFIV   79 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCT-----TSHHH-HHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCC-----CCHHH-HHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence            679999999999999999999998 9999999984     33211 2334568999999999999999999999999999


Q ss_pred             CcCCC-------chhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEeccee
Q 039623           81 VSRGQ-------IPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCF  153 (292)
Q Consensus        81 a~~~~-------~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~  153 (292)
                      ++...       +..+++++++|++.+ ++++|+++.......  ....+..+|+.+|..+|+++++.+++++++||+.|
T Consensus        80 a~~~~~~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~--~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~  156 (299)
T 2wm3_A           80 TNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL--TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCY  156 (299)
T ss_dssp             CCHHHHTCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHH--TTTSCCCHHHHHHHHHHHHHHHHTCCEEEEECCEE
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHcC-CCEEEEEcCcccccc--CCCcccCchhhHHHHHHHHHHHCCCCEEEEeecHH
Confidence            98532       568899999999998 999998443221111  01113456778999999999999999999999999


Q ss_pred             ccccccccccCCCCCCCCC-c-eeecCCCcceEEeeccchHHHHHHHhhcCCc-CCCceEEEcCCCccccHHHHHHHHHH
Q 039623          154 AGYFLPTLAQIGAPAPPRE-K-VTIFGDGNAGAVYNKEDDIATYTINSIDGPR-TLNKTLYIRPPGNVYSFNELVTLWEN  230 (292)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~~~~~~~~~t~~e~~~~~~~  230 (292)
                      ++++...+....   ...+ . ....+.++..+++++++|+|++++.++.++. ..++.|++.|  +.+|+.|+++.+.+
T Consensus       157 ~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g--~~~s~~e~~~~~~~  231 (299)
T 2wm3_A          157 FENLLSHFLPQK---APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST--CRHTAEEYAALLTK  231 (299)
T ss_dssp             GGGGGTTTCCEE---CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS--EEECHHHHHHHHHH
T ss_pred             hhhchhhcCCcc---cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee--ccCCHHHHHHHHHH
Confidence            998655322211   1222 1 2233457788999999999999999998752 3577888874  48999999999999


Q ss_pred             HhCCCcceeecCHHHHHHHHHhCCCCh
Q 039623          231 KIGKTLEKTYVAEEKLLKDIQDAPIPL  257 (292)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (292)
                      .+|.++++..+|.+++.+    .++|.
T Consensus       232 ~~g~~~~~~~~~~~~~~~----~g~~~  254 (299)
T 2wm3_A          232 HTRKVVHDAKMTPEDYEK----LGFPG  254 (299)
T ss_dssp             HHSSCEEECCCCTHHHHT----TCSTT
T ss_pred             HHCCCceeEecCHHHHHh----cCCCc
Confidence            999999999999888875    35554

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.6e-32  Score=231.80  Aligned_cols=233  Identities=19%  Similarity=0.291  Sum_probs=185.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      +||||||||+||+++++.|+++  |++|++++|++     ++.   +.+...+++++.+|++|++++.++++++|+|||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~-----~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNP-----AKA---QALAAQGITVRQADYGDEAALTSALQGVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCT-----TTC---HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcCh-----Hhh---hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            6899999999999999999998  99999999983     333   2233468999999999999999999999999999


Q ss_pred             CcCCC---chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceeccc
Q 039623           81 VSRGQ---IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGY  156 (292)
Q Consensus        81 a~~~~---~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~  156 (292)
                      ++...   +..+++++++|++.+ ++++|+ |+.+.. ..       ..+|..+|..+|+++++.+++++++||++|+++
T Consensus        73 a~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~~-------~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~  143 (286)
T 2zcu_A           73 SSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD-TS-------PLGLADEHIETEKMLADSGIVYTLLRNGWYSEN  143 (286)
T ss_dssp             C--------CHHHHHHHHHHHHT-CCEEEEEEETTTT-TC-------CSTTHHHHHHHHHHHHHHCSEEEEEEECCBHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-CC-------cchhHHHHHHHHHHHHHcCCCeEEEeChHHhhh
Confidence            98642   788999999999998 999998 444332 11       235667999999999999999999999999887


Q ss_pred             cccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          157 FLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      ....+...    ...+.+. .+.+++.+++++++|+|++++.++.++...+++|++.++. .+|++|+++.+.+.+|.+.
T Consensus       144 ~~~~~~~~----~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~~  217 (286)
T 2zcu_A          144 YLASAPAA----LEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDS-AWTLTQLAAELTKQSGKQV  217 (286)
T ss_dssp             HHTTHHHH----HHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSS-CBCHHHHHHHHHHHHSSCC
T ss_pred             hHHHhHHh----hcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCC-cCCHHHHHHHHHHHHCCCC
Confidence            54322111    1223333 5667788999999999999999998865567899998665 8999999999999999999


Q ss_pred             ceeecCHHHHHHHHHhCCCChh
Q 039623          237 EKTYVAEEKLLKDIQDAPIPLN  258 (292)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~  258 (292)
                      ++..+|.+.+...+...+.|..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T 2zcu_A          218 TYQNLSEADFAAALKSVGLPDG  239 (286)
T ss_dssp             EEEECCHHHHHHHHTTSSCCHH
T ss_pred             ceeeCCHHHHHHHHHHcCCCHH
Confidence            9999998887776655555554

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.3e-32  Score=237.07  Aligned_cols=224  Identities=17%  Similarity=0.219  Sum_probs=181.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|||||||||||++|++.|+++|++|++++|+..     +         .+++++.+|++|.+++.++++++|+|||+|
T Consensus        20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----~---------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   85 (347)
T 4id9_A           20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-----G---------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG   85 (347)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-----S---------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-----C---------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence            78999999999999999999999999999999843     1         478899999999999999999999999999


Q ss_pred             cCCC-------------chhHHHHHHHHHHhCCcceeec-c---CCCCC--Cc---cCCccCCCCcchHHHHHHHHHHHH
Q 039623           82 SRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGND--VD---RSQNVVEPAKSAYADKIKIRRAIE  139 (292)
Q Consensus        82 ~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~--~~---~~~~~~~~~~~~~~~K~~~e~~~~  139 (292)
                      +...             +.++.+++++|++.+ +++||+ |   +||..  ..   .++.+..|...|..+|+.+|++++
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~  164 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVR  164 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Confidence            9754             578899999999998 999987 3   46652  11   114455565666669999999987


Q ss_pred             H----cCccEEEEecceec-------------cccc-----------------cccccCCCCCCCCCceeecCCCcceEE
Q 039623          140 A----EGIQYTYVSCNCFA-------------GYFL-----------------PTLAQIGAPAPPREKVTIFGDGNAGAV  185 (292)
Q Consensus       140 ~----~~~~~~~ir~~~~~-------------~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (292)
                      .    .+++++++||+.++             |...                 +.+...   ...+.++.+++++++.++
T Consensus       165 ~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~  241 (347)
T 4id9_A          165 FHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQS---RDIGEPSHILARNENGRP  241 (347)
T ss_dssp             HHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHH---HCCSSCCEEEEECTTCCB
T ss_pred             HHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHH---HHcCCCeEEeCCCCcccC
Confidence            4    58999999999998             5431                 111111   134566778888888889


Q ss_pred             e----eccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHH
Q 039623          186 Y----NKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE  244 (292)
Q Consensus       186 ~----i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~  244 (292)
                      +    +|++|+|++++.+++++...+++|+++++. .+|+.|+++.+.+.+|.+.++...|.+
T Consensus       242 ~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~p~~  303 (347)
T 4id9_A          242 FRMHITDTRDMVAGILLALDHPEAAGGTFNLGADE-PADFAALLPKIAALTGLPIVTVDFPGD  303 (347)
T ss_dssp             CEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSS-CEEHHHHHHHHHHHHCCCEEEEECSSC
T ss_pred             CccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCC-cccHHHHHHHHHHHhCCCCceeeCCCc
Confidence            9    999999999999999875668899998765 899999999999999998777665543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.5e-33  Score=243.30  Aligned_cols=226  Identities=19%  Similarity=0.255  Sum_probs=178.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-CHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-DHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-d~~~~~~~~~~~d~vi   78 (292)
                      ||+|||||||||||++|+++|+++ |++|++++|+..     +...+  ....+++++.+|++ |.+.+.++++++|+||
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-----~~~~~--~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi   96 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTD-----RLGDL--VKHERMHFFEGDITINKEWVEYHVKKCDVIL   96 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCT-----TTGGG--GGSTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChh-----hhhhh--ccCCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence            478999999999999999999998 899999999843     32211  12468999999999 9999999999999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccC-------CCCcchHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVV-------EPAKSAYA  129 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~-------~~~~~~~~  129 (292)
                      |+|+...               +.++.+++++|++.+  ++||+ |   +||......   +...       .|.+.|..
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~  174 (372)
T 3slg_A           97 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYAC  174 (372)
T ss_dssp             ECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             EcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHH
Confidence            9999754               567899999999997  77776 3   355432211   1111       23335666


Q ss_pred             HHHHHHHHHHHc---CccEEEEecceeccccccc--------------cccCCCCCCCCCceeecCCCcceEEeeccchH
Q 039623          130 DKIKIRRAIEAE---GIQYTYVSCNCFAGYFLPT--------------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       130 ~K~~~e~~~~~~---~~~~~~ir~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                      +|+.+|++++..   +++++++||+.++|.....              +...   ...+..+.+++++++.++++|++|+
T Consensus       175 sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~v~Dv  251 (372)
T 3slg_A          175 SKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGH---IVRGENISLVDGGSQKRAFTYVDDG  251 (372)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHH---HHHTCCEEEGGGGCCEEECEEHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHH---HHcCCCcEEeCCCceEEEEEEHHHH
Confidence            999999999876   8999999999988875321              1111   1345667788888999999999999


Q ss_pred             HHHHHHhhcCCc--CCCceEEEcCCCccccHHHHHHHHHHHhCCCcce
Q 039623          193 ATYTINSIDGPR--TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEK  238 (292)
Q Consensus       193 a~~~~~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  238 (292)
                      |++++.+++++.  ..+++|+++++++.+|+.|+++.+.+.+|.+.++
T Consensus       252 a~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~  299 (372)
T 3slg_A          252 ISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEY  299 (372)
T ss_dssp             HHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTT
T ss_pred             HHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCccc
Confidence            999999999875  5688999987545999999999999999876543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=5.7e-32  Score=234.53  Aligned_cols=228  Identities=16%  Similarity=0.192  Sum_probs=178.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHcc--CC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQ--VD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~--~d   75 (292)
                      ||+|||||||||||++|+++|+++|  ++|++++|.....   ..+.+..+ ...+++++.+|++|.+++.+++++  +|
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  100 (346)
T 4egb_A           24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG---NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ  100 (346)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC---CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc---chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence            4789999999999999999999999  6677777764322   12222222 236899999999999999999986  99


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc----cCCccCCCCcchHHHHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD----RSQNVVEPAKSAYADKI  132 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~----~~~~~~~~~~~~~~~K~  132 (292)
                      +|||+|+...               +.++.+++++|++.+ +++||+ |   +||....    .++.+..|...|..+|.
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~  179 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKA  179 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHH
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHH
Confidence            9999999653               667899999999998 899987 3   3654311    11455556666777999


Q ss_pred             HHHHHHHH----cCccEEEEecceecccccc------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          133 KIRRAIEA----EGIQYTYVSCNCFAGYFLP------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       133 ~~e~~~~~----~~~~~~~ir~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      .+|++++.    .+++++++||+.++|....      .+...   ...+.++.+++++++.++++|++|+|++++.++++
T Consensus       180 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  256 (346)
T 4egb_A          180 SADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTN---ALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHK  256 (346)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHH---HHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHH---HHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence            99999876    5999999999999886431      11111   13456677889999999999999999999999987


Q ss_pred             CcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          203 PRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       203 ~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      +. .+++|+++++. .+|+.|+++.+.+.+|.+.+
T Consensus       257 ~~-~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          257 GR-VGEVYNIGGNN-EKTNVEVVEQIITLLGKTKK  289 (346)
T ss_dssp             CC-TTCEEEECCSC-CEEHHHHHHHHHHHHTCCGG
T ss_pred             CC-CCCEEEECCCC-ceeHHHHHHHHHHHhCCCcc
Confidence            65 57799998765 89999999999999998655

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.9e-31  Score=225.22  Aligned_cols=216  Identities=13%  Similarity=0.105  Sum_probs=172.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|||||| ||||++++++|+++|++|++++|+     +++.   ..+...+++++.+|+.|.+     +.++|+|||+
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~-----~~~~---~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~   70 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN-----PDQM---EAIRASGAEPLLWPGEEPS-----LDGVTHLLIS   70 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESC-----GGGH---HHHHHTTEEEEESSSSCCC-----CTTCCEEEEC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcC-----hhhh---hhHhhCCCeEEEecccccc-----cCCCCEEEEC
Confidence            578999998 999999999999999999999998     4444   3334578999999999954     7799999999


Q ss_pred             CcCCC--chhHHHHHHHHHH--hCCcceeec-c---CCCCCCcc---CCccCCCCcchHHHHHHHHHHHHHc-CccEEEE
Q 039623           81 VSRGQ--IPEQAKIIAAVKE--AGNVKRFLP-S---EFGNDVDR---SQNVVEPAKSAYADKIKIRRAIEAE-GIQYTYV  148 (292)
Q Consensus        81 a~~~~--~~~~~~l~~a~~~--~~~~~~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K~~~e~~~~~~-~~~~~~i  148 (292)
                      |+...  ...+.+++++|++  .+ +++||+ |   .||.....   ++.+..|.+.|..+|+.+|++++.. +++++++
T Consensus        71 a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~il  149 (286)
T 3ius_A           71 TAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVF  149 (286)
T ss_dssp             CCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred             CCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEE
Confidence            99765  4567899999998  66 899987 3   46544321   1455556666666999999999997 9999999


Q ss_pred             ecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHH
Q 039623          149 SCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLW  228 (292)
Q Consensus       149 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~  228 (292)
                      ||+.++|.....+...    ..+....+.+. .+.++++|++|+|++++.+++++. .+++||++++. .+|+.|+++.+
T Consensus       150 Rp~~v~G~~~~~~~~~----~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~-~~s~~e~~~~i  222 (286)
T 3ius_A          150 RLAGIYGPGRGPFSKL----GKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDE-PVPPQDVIAYA  222 (286)
T ss_dssp             EECEEEBTTBSSSTTS----SSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSC-CBCHHHHHHHH
T ss_pred             eccceECCCchHHHHH----hcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCC-CccHHHHHHHH
Confidence            9999998764443222    33444555554 578999999999999999999876 56799998665 89999999999


Q ss_pred             HHHhCCCcce
Q 039623          229 ENKIGKTLEK  238 (292)
Q Consensus       229 ~~~~~~~~~~  238 (292)
                      .+.+|.+.+.
T Consensus       223 ~~~~g~~~~~  232 (286)
T 3ius_A          223 AELQGLPLPP  232 (286)
T ss_dssp             HHHHTCCCCC
T ss_pred             HHHcCCCCCc
Confidence            9999987653

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-31  Score=228.96  Aligned_cols=238  Identities=19%  Similarity=0.209  Sum_probs=181.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||||||||||+++++.|+++|++|++++|+.... .+..+.+......+++++.+|++|++++.++++  ++|+|||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   84 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK-REAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH   84 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC-THHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch-HHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence            5899999999999999999999999999999985433 222222333335689999999999999999998  8999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~~~~~~~~~~K~~~e~~  137 (292)
                      +|+...               +.++.+++++|++.+ ++++|+ |   .||......   +.+..|.+.|..+|..+|++
T Consensus        85 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           85 FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             CccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            999764               568899999999998 889887 3   465433211   34455556666699999999


Q ss_pred             HHHc-----CccEEEEecceeccccccccccCC------------C--CCCCCCceeecC------CCcceEEeeccchH
Q 039623          138 IEAE-----GIQYTYVSCNCFAGYFLPTLAQIG------------A--PAPPREKVTIFG------DGNAGAVYNKEDDI  192 (292)
Q Consensus       138 ~~~~-----~~~~~~ir~~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~------~~~~~~~~i~v~D~  192 (292)
                      ++..     +++++++||+.++|..........            .  .......+.+++      ++++.++|+|++|+
T Consensus       164 ~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv  243 (341)
T 3enk_A          164 LRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDL  243 (341)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred             HHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHH
Confidence            8752     499999999998876431110000            0  001223455556      78899999999999


Q ss_pred             HHHHHHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          193 ATYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       193 a~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      |++++.++++.  ...+++||++++. .+|+.|+++.+.+.+|.+.++...+
T Consensus       244 a~a~~~~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  294 (341)
T 3enk_A          244 ARGHIAALDALERRDASLTVNLGTGR-GYSVLEVVRAFEKASGRAVPYELVA  294 (341)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEESCSC-CEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             HHHHHHHHHhhhcCCcceEEEeCCCC-ceeHHHHHHHHHHHhCCCcceeeCC
Confidence            99999999862  3457899998665 8999999999999999887766554

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.4e-31  Score=231.59  Aligned_cols=231  Identities=15%  Similarity=0.128  Sum_probs=173.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|||||||||||++++++|+++|++|++++|+.     .+.+   .+...+++++.+|++|.+++.++++++|+|||+
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----~~~~---~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS-----SQIQ---RLAYLEPECRVAEMLDHAGLERALRGLDGVIFS   84 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTT-----SCGG---GGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCh-----Hhhh---hhccCCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            46899999999999999999999999999999984     3332   222358999999999999999999999999999


Q ss_pred             CcCCC-------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc----cCCccCCC----CcchHHHHHHHH
Q 039623           81 VSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD----RSQNVVEP----AKSAYADKIKIR  135 (292)
Q Consensus        81 a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~----~~~~~~~~----~~~~~~~K~~~e  135 (292)
                      |+...             +.++.+++++|++.+ ++++|+ |   +|+....    .++.+..|    ...|..+|+.+|
T Consensus        85 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e  163 (342)
T 2x4g_A           85 AGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALD  163 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHH
T ss_pred             CccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHH
Confidence            98643             668899999999998 899987 3   3543221    11444445    455666999999


Q ss_pred             HHHHH---cCccEEEEecceeccccc-c-ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceE
Q 039623          136 RAIEA---EGIQYTYVSCNCFAGYFL-P-TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL  210 (292)
Q Consensus       136 ~~~~~---~~~~~~~ir~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  210 (292)
                      ++++.   .+++++++||+.++|... . .+.........+....+   +++.++++|++|+|++++.+++++.. +++|
T Consensus       164 ~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~  239 (342)
T 2x4g_A          164 EQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY  239 (342)
T ss_dssp             HHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred             HHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence            99876   389999999999988654 1 11000000012223333   56789999999999999999987654 7788


Q ss_pred             EEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHHH
Q 039623          211 YIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLL  247 (292)
Q Consensus       211 ~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
                      ++.++ . +|+.|+++.+.+.+|.+.++ .+|.+.+.
T Consensus       240 ~v~~~-~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~  273 (342)
T 2x4g_A          240 LLTGH-N-LEMADLTRRIAELLGQPAPQ-PMSMAMAR  273 (342)
T ss_dssp             EECCE-E-EEHHHHHHHHHHHHTCCCCE-EECHHHHH
T ss_pred             EEcCC-c-ccHHHHHHHHHHHhCCCCCC-cCCHHHHH
Confidence            88754 3 99999999999999998887 77876543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.98  E-value=1.8e-31  Score=234.21  Aligned_cols=227  Identities=17%  Similarity=0.174  Sum_probs=176.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|||||||||||++++++|+++|++|++++|+....     .   .....+++++.+|++|.+++.++++++|+|||+
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-----M---TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-----S---CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc-----h---hhccCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            68999999999999999999999999999999985432     1   112457899999999999999999999999999


Q ss_pred             CcCCC----------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc--------cCCc--cCCCCcchHHH
Q 039623           81 VSRGQ----------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD--------RSQN--VVEPAKSAYAD  130 (292)
Q Consensus        81 a~~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~--------~~~~--~~~~~~~~~~~  130 (292)
                      |+...                +.++.+++++|++.+ +++||+ |   .|+....        .++.  +..|...|..+
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~s  179 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE  179 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHH
Confidence            98642                457889999999988 889887 3   3443211        0011  33455556669


Q ss_pred             HHHHHHHHHH----cCccEEEEecceeccccccc----------cccCCCCCCCCCc-eeecCCCcceEEeeccchHHHH
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT----------LAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      |..+|++++.    .+++++++||+.++|.....          +....   ..+.+ +.+++++++.++++|++|+|++
T Consensus       180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~g~~~~~~i~v~Dva~a  256 (379)
T 2c5a_A          180 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA---QTSTDRFEMWGDGLQTRSFTFIDECVEG  256 (379)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHH---HHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHH---HhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence            9999998864    58999999999998864321          11110   12333 6678888899999999999999


Q ss_pred             HHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          196 TINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       196 ~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ++.+++++  .+++|+++++. .+|++|+++.+.+.+|.+.++..+|
T Consensus       257 i~~~l~~~--~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~p  300 (379)
T 2c5a_A          257 VLRLTKSD--FREPVNIGSDE-MVSMNEMAEMVLSFEEKKLPIHHIP  300 (379)
T ss_dssp             HHHHHHSS--CCSCEEECCCC-CEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             HHHHhhcc--CCCeEEeCCCC-ccCHHHHHHHHHHHhCCCCceeeCC
Confidence            99999875  36789998665 8999999999999999877665554

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.98  E-value=4.2e-31  Score=227.60  Aligned_cols=232  Identities=19%  Similarity=0.293  Sum_probs=174.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      ||+|||||||||||++++++|+++|++|++++|+.... .      +.+ ..+++++.+|++|.+++.++++  ++|+||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~------~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   72 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH-E------DAI-TEGAKFYNGDLRDKAFLRDVFTQENIEAVM   72 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-G------GGS-CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc-h------hhc-CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            89999999999999999999999999999999974321 1      111 2378999999999999999998  899999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      |+|+...               +.++.+++++|++.+ ++++|+ |   .||....   .++.+..|...|..+|..+|+
T Consensus        73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  151 (330)
T 2c20_A           73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEK  151 (330)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred             ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHH
Confidence            9999753               568899999999988 899887 3   3553221   113344455666669999999


Q ss_pred             HHHH----cCccEEEEecceeccccccc-----------cccCCCC-CC-CCCceeecC------CCcceEEeeccchHH
Q 039623          137 AIEA----EGIQYTYVSCNCFAGYFLPT-----------LAQIGAP-AP-PREKVTIFG------DGNAGAVYNKEDDIA  193 (292)
Q Consensus       137 ~~~~----~~~~~~~ir~~~~~~~~~~~-----------~~~~~~~-~~-~~~~~~~~~------~~~~~~~~i~v~D~a  193 (292)
                      +++.    .+++++++||+.++|.....           +...... .. ....+.+++      ++++.++++|++|+|
T Consensus       152 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva  231 (330)
T 2c20_A          152 MLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV  231 (330)
T ss_dssp             HHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHH
Confidence            9875    48999999999988764211           0000000 01 223455554      678899999999999


Q ss_pred             HHHHHhhcCCcC--CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          194 TYTINSIDGPRT--LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       194 ~~~~~~l~~~~~--~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ++++.+++++..  .+++||++++. .+|++|+++.+.+.+|.+.++...+
T Consensus       232 ~a~~~~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  281 (330)
T 2c20_A          232 AAHFLGLKDLQNGGESDFYNLGNGN-GFSVKEIVDAVREVTNHEIPAEVAP  281 (330)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECCCTT-CBCHHHHHHHHHHHTTSCCCEEEEC
T ss_pred             HHHHHHHhccccCCCCCeEEeCCCC-CccHHHHHHHHHHHhCCCCceeeCC
Confidence            999999976432  35788887554 8999999999999999876655443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.98  E-value=1.4e-31  Score=228.74  Aligned_cols=229  Identities=17%  Similarity=0.194  Sum_probs=175.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|||||||||||++|++.|+++|++|++++|++...        ......+++++.+|+.|.+ +.+++++ |+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A   70 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR--------REFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC--------GGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc--------hhhcCCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence            6899999999999999999999999999999984432        1222568999999999998 8888888 9999999


Q ss_pred             cCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccCCCCcchHHHHHHHHHHHH
Q 039623           82 SRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVVEPAKSAYADKIKIRRAIE  139 (292)
Q Consensus        82 ~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~~~~~~~~~~K~~~e~~~~  139 (292)
                      +...               +.++.+++++|++.+ ++++|+ |   .||......   +.+..|.+.|..+|..+|++++
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~  149 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCA  149 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence            9643               678899999999998 899987 3   465433211   4455566666669999999887


Q ss_pred             H----cCccEEEEecceeccccccc-----cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC---CcCCC
Q 039623          140 A----EGIQYTYVSCNCFAGYFLPT-----LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG---PRTLN  207 (292)
Q Consensus       140 ~----~~~~~~~ir~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~  207 (292)
                      .    .+++++++||+.++|+....     +....  ......+..++++++.++++|++|+|++++.++++   +...+
T Consensus       150 ~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~  227 (312)
T 3ko8_A          150 TYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKL--RRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF  227 (312)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHH--HHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSE
T ss_pred             HHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHH--HhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCC
Confidence            5    58999999999998864321     11110  01234567888899999999999999999999987   44557


Q ss_pred             ceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHH
Q 039623          208 KTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE  244 (292)
Q Consensus       208 ~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~  244 (292)
                      ++||++++. .+|+.|+++.+.+.+|.+..+...|..
T Consensus       228 ~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~  263 (312)
T 3ko8_A          228 LALNVGNVD-AVRVLDIAQIVAEVLGLRPEIRLVPST  263 (312)
T ss_dssp             EEEEESCSS-CEEHHHHHHHHHHHHTCCCEEEEC---
T ss_pred             cEEEEcCCC-ceeHHHHHHHHHHHhCCCCceeecCcc
Confidence            789998655 899999999999999988887776653

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.98  E-value=2.9e-31  Score=227.04  Aligned_cols=227  Identities=16%  Similarity=0.232  Sum_probs=173.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|||||||||||++|+++|+++| .++++++....    +.+    ....+++++.+|++| +++.++++++|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~----~~~----~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~   70 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSG----NEE----FVNEAARLVKADLAA-DDIKDYLKGAEEVWHI   70 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSC----CGG----GSCTTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCC----Chh----hcCCCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence            8999999999999999999999999 66666654322    111    124678999999999 8899999999999999


Q ss_pred             CcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccCCCCcchHHHHHHHHHHH
Q 039623           81 VSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        81 a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      |+...               +.++.+++++|++.+ ++++|+ |   +||......   +.+..|.+.|..+|..+|+++
T Consensus        71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  149 (313)
T 3ehe_A           71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALI  149 (313)
T ss_dssp             CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            98642               678999999999998 889887 3   355433211   344455556666999999988


Q ss_pred             HH----cCccEEEEecceeccccccc-----cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCce
Q 039623          139 EA----EGIQYTYVSCNCFAGYFLPT-----LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKT  209 (292)
Q Consensus       139 ~~----~~~~~~~ir~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  209 (292)
                      +.    .+++++++||+.++|.....     +....  ......+.+++++++.++++|++|+|++++.+++. ...+++
T Consensus       150 ~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~  226 (313)
T 3ehe_A          150 ESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKL--KRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-DERVNI  226 (313)
T ss_dssp             HHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHH--HHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-CSSEEE
T ss_pred             HHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHH--HcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-CCCCce
Confidence            74    58999999999998864321     11110  01224567889999999999999999999999984 345678


Q ss_pred             EEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          210 LYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       210 ~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ||++++. .+|+.|+++.+.+.+|.++.+...+
T Consensus       227 ~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  258 (313)
T 3ehe_A          227 FNIGSED-QIKVKRIAEIVCEELGLSPRFRFTG  258 (313)
T ss_dssp             EECCCSC-CEEHHHHHHHHHHHTTCCCEEEEC-
T ss_pred             EEECCCC-CeeHHHHHHHHHHHhCCCCceEECC
Confidence            8887655 9999999999999999887766554

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.98  E-value=5e-32  Score=228.90  Aligned_cols=218  Identities=14%  Similarity=0.175  Sum_probs=175.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc-CCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ-VDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~-~d~vi~   79 (292)
                      ||+||||| +||||++|++.|+++|++|++++|+.+.     .       ..+++++.+|++|.+++.+++++ +|+|||
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~-------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih   69 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP-----M-------PAGVQTLIADVTRPDTLASIVHLRPEILVY   69 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC-----C-------CTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc-----c-------ccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence            47899999 5999999999999999999999998432     1       46889999999999999999987 999999


Q ss_pred             cCcCCC----------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc---CCccCCCCcchHHHHHHHHHHHHHcC
Q 039623           80 TVSRGQ----------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR---SQNVVEPAKSAYADKIKIRRAIEAEG  142 (292)
Q Consensus        80 ~a~~~~----------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K~~~e~~~~~~~  142 (292)
                      +|+...          +.++.+++++|++.+ +++||+ |   +||.....   ++.+..|.+.|..+|..+|++ ... 
T Consensus        70 ~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-  146 (286)
T 3gpi_A           70 CVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-  146 (286)
T ss_dssp             CHHHHHHC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-
T ss_pred             eCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-
Confidence            998643          678999999999888 899987 3   46654321   144555666666699999999 777 


Q ss_pred             ccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC--cCCCceEEEcCCCcccc
Q 039623          143 IQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP--RTLNKTLYIRPPGNVYS  220 (292)
Q Consensus       143 ~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~t  220 (292)
                      ++++++||+.++|.....+....   ..  . ...+.+++.++++|++|+|++++.+++++  ...+++|+++++. .+|
T Consensus       147 ~~~~ilR~~~v~G~~~~~~~~~~---~~--~-~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~-~~s  219 (286)
T 3gpi_A          147 YSSTILRFSGIYGPGRLRMIRQA---QT--P-EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQ-PLP  219 (286)
T ss_dssp             SSEEEEEECEEEBTTBCHHHHHT---TC--G-GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSC-CEE
T ss_pred             CCeEEEecccccCCCchhHHHHH---Hh--c-ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCC-CCC
Confidence            99999999999987655443332   12  2 23477788999999999999999999874  3557889887655 899


Q ss_pred             HHHHHHHHHHHhCCCcceeec
Q 039623          221 FNELVTLWENKIGKTLEKTYV  241 (292)
Q Consensus       221 ~~e~~~~~~~~~~~~~~~~~~  241 (292)
                      +.|+++.+.+.+|.+.++...
T Consensus       220 ~~e~~~~i~~~~g~~~~~~~~  240 (286)
T 3gpi_A          220 VHDLLRWLADRQGIAYPAGAT  240 (286)
T ss_dssp             HHHHHHHHHHHTTCCCCCSCC
T ss_pred             HHHHHHHHHHHcCCCCCCCCC
Confidence            999999999999987665443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.98  E-value=9.5e-31  Score=227.43  Aligned_cols=234  Identities=17%  Similarity=0.194  Sum_probs=177.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      ||+|||||||||||+++++.|+++|++|++++|+.... .++.+.+...    ...+++++.+|++|.+++.++++++|+
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  105 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY  105 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence            57899999999999999999999999999999974321 1222211111    136899999999999999999999999


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~  134 (292)
                      |||+|+...               +.++.+++++|++.+ +++||+ |   +|+....   .++.+..|...|..+|..+
T Consensus       106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            999999653               677899999999988 899987 3   3554321   1133444555666699999


Q ss_pred             HHHHHH----cCccEEEEecceecccccccc------cc-CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLPTL------AQ-IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |++++.    .+++++++||+.++|......      .. .......+.++.+++++++.++++|++|+|++++.++...
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~  264 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG  264 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence            999864    589999999999988653211      00 0000023455667788889999999999999999998763


Q ss_pred             -cCCCceEEEcCCCccccHHHHHHHHHHHh---CCCcc
Q 039623          204 -RTLNKTLYIRPPGNVYSFNELVTLWENKI---GKTLE  237 (292)
Q Consensus       204 -~~~~~~~~~~~~~~~~t~~e~~~~~~~~~---~~~~~  237 (292)
                       ...+++|+++++. .+|++|+++.+.+.+   |.+..
T Consensus       265 ~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          265 LDARNQVYNIAVGG-RTSLNQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             GGGCSEEEEESCSC-CEEHHHHHHHHHHHHHHTTCCCC
T ss_pred             ccCCCceEEeCCCC-CccHHHHHHHHHHHHHhcCCCCC
Confidence             3457889998665 899999999999999   87655

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.98  E-value=2.6e-31  Score=230.34  Aligned_cols=235  Identities=14%  Similarity=0.169  Sum_probs=175.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCHHHHHHHHcc--CCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDHESLIKAIKQ--VDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~~--~d~v   77 (292)
                      ||+|||||||||||+++++.|+++|++|++++|+....   ....+..+. ..+++++.+|++|.+++.+++++  +|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG---ATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTT---HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccC---chhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            89999999999999999999999999999999863211   111122222 23589999999999999999987  9999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhCCcc-eeec-c---CCCCCCc-------------------cCC
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAGNVK-RFLP-S---EFGNDVD-------------------RSQ  118 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~~~~-~~i~-s---~~g~~~~-------------------~~~  118 (292)
                      ||+|+...               +.++.+++++|++.+ ++ +||+ |   +||....                   .++
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~  156 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES  156 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence            99999753               567899999999998 75 8887 3   3553211                   002


Q ss_pred             ccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccccc---------cccCCCCCCCCC-----ceeecCCC
Q 039623          119 NVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT---------LAQIGAPAPPRE-----KVTIFGDG  180 (292)
Q Consensus       119 ~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~---------~~~~~~~~~~~~-----~~~~~~~~  180 (292)
                      .+..|...|..+|+.+|++++.    .+++++++||+.++|.....         +....   ..+.     ++..++++
T Consensus       157 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~g  233 (347)
T 1orr_A          157 TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKA---VEIKNGINKPFTISGNG  233 (347)
T ss_dssp             SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHH---HHHHTTCCCCEEEESSS
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHH---HhCcccCCCCeEEecCC
Confidence            2334555566699999999875    48999999999998864321         11100   1122     56678889


Q ss_pred             cceEEeeccchHHHHHHHhhcCC-cCCCceEEEcCCCc-cccHHHHHHHHHHHhCCCcceeecC
Q 039623          181 NAGAVYNKEDDIATYTINSIDGP-RTLNKTLYIRPPGN-VYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       181 ~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~~~~~~~-~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ++.+++++++|+|++++.+++++ ...+++|++.++.. .+|++|+++.+.+.+|.+.++...|
T Consensus       234 ~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  297 (347)
T 1orr_A          234 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP  297 (347)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             cceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCC
Confidence            99999999999999999999862 33567899986542 5999999999999999877666555

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.98  E-value=8e-31  Score=228.78  Aligned_cols=237  Identities=13%  Similarity=0.148  Sum_probs=179.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHh--CCCCEEEEecCCCCC-----CCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-Hcc
Q 039623            2 AATLIIGGTGYIGKKILEASVK--AGHPTFALVRESTAS-----DPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~   73 (292)
                      |+|||||||||||+++++.|++  .|++|++++|+....     ..++......+...++.++.+|++|++++.++ ..+
T Consensus        11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   90 (362)
T 3sxp_A           11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLH   90 (362)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccC
Confidence            6899999999999999999999  899999999975411     01111222334456789999999999999998 779


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc--CCccCCCCcchHHHHHHH
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR--SQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~--~~~~~~~~~~~~~~K~~~  134 (292)
                      +|+|||+||...             +.++.+++++|++.+ ++ ||+ |   .||.....  ++.+..|.+.|..+|..+
T Consensus        91 ~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~  168 (362)
T 3sxp_A           91 FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCM  168 (362)
T ss_dssp             CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHH
T ss_pred             CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            999999999644             678999999999998 77 776 3   46543321  144555666677799999


Q ss_pred             HHHHHHcC--ccEEEEecceecccccccc------ccCC-CCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          135 RRAIEAEG--IQYTYVSCNCFAGYFLPTL------AQIG-APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       135 e~~~~~~~--~~~~~ir~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      |++++...  ++++++||+.++|+.....      .... .....+..+.+++++++.++++|++|+|++++.+++++. 
T Consensus       169 E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~-  247 (362)
T 3sxp_A          169 DEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK-  247 (362)
T ss_dssp             HHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS-
T ss_pred             HHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC-
Confidence            99999865  7899999977776543211      0000 001345566777888899999999999999999999864 


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHH
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEE  244 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~  244 (292)
                      .+ +|+++++. .+|+.|+++.+.+.+| +.++...|.+
T Consensus       248 ~g-~~~i~~~~-~~s~~e~~~~i~~~~g-~~~~~~~~~~  283 (362)
T 3sxp_A          248 SG-VYNVGYSQ-ARSYNEIVSILKEHLG-DFKVTYIKNP  283 (362)
T ss_dssp             CE-EEEESCSC-EEEHHHHHHHHHHHHC-CCEEECCC--
T ss_pred             CC-EEEeCCCC-CccHHHHHHHHHHHcC-CCceEECCCC
Confidence            34 88887665 8999999999999999 7777666654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=3.2e-31  Score=216.43  Aligned_cols=204  Identities=22%  Similarity=0.209  Sum_probs=154.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+||||||||+||+++++.|+++|++|++++|++     ++.+.+    ..+++++.+|++|.+++.++++++|+|||+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-----~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP-----EKIKIE----NEHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG-----GGCCCC----CTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc-----ccchhc----cCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            57999999999999999999999999999999983     333211    268999999999999999999999999999


Q ss_pred             CcCCC---------chhHHHHHHHHHHhCCcceeec-cCCCCCCcc-----CCccCCCCcchHHHHHHHHHHHHH----c
Q 039623           81 VSRGQ---------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDR-----SQNVVEPAKSAYADKIKIRRAIEA----E  141 (292)
Q Consensus        81 a~~~~---------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~-----~~~~~~~~~~~~~~K~~~e~~~~~----~  141 (292)
                      ++...         +.++.+++++|++.+ ++++|+ |+.+.....     .+.+..|...|..+|...|.+++.    .
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  153 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEK  153 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCC
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhcc
Confidence            98763         788999999999998 899988 544322111     033444555555699999966653    5


Q ss_pred             CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccH
Q 039623          142 GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSF  221 (292)
Q Consensus       142 ~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~  221 (292)
                      +++++++||+.++|+.......     ..+...... .++. ++++|++|+|++++.+++++...+++|++++++ +.++
T Consensus       154 ~~~~~ilrp~~v~g~~~~~~~~-----~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~-~~~~  225 (227)
T 3dhn_A          154 EIDWVFFSPAADMRPGVRTGRY-----RLGKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLE-HHHH  225 (227)
T ss_dssp             SSEEEEEECCSEEESCCCCCCC-----EEESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCS-CCC-
T ss_pred             CccEEEEeCCcccCCCccccce-----eecCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeeh-hccc
Confidence            7999999999988764321110     111122222 2222 799999999999999999998889999999877 7776


Q ss_pred             H
Q 039623          222 N  222 (292)
Q Consensus       222 ~  222 (292)
                      +
T Consensus       226 ~  226 (227)
T 3dhn_A          226 H  226 (227)
T ss_dssp             -
T ss_pred             C
Confidence            5

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=1e-30  Score=226.79  Aligned_cols=240  Identities=20%  Similarity=0.218  Sum_probs=174.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-----CCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--c
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-----DPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--Q   73 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~   73 (292)
                      +|+|||||||||||++++++|+++|++|++++|+....     ..+..+.+......+++++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            26899999999999999999999999999999864320     0222222222234678999999999999999998  8


Q ss_pred             CCEEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccCCC-CcchHHH
Q 039623           74 VDVVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVVEP-AKSAYAD  130 (292)
Q Consensus        74 ~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~~~-~~~~~~~  130 (292)
                      +|+|||+|+...               +.++.+++++|++.+ ++++|+ |   .||......   +.+..| ...|..+
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s  160 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence            999999999753               567899999999988 889887 3   355322111   333344 4555569


Q ss_pred             HHHHHHHHHHc---C--ccEEEEecceeccccccc------------cccCCCC-CC-CCCceeecC------CCcceEE
Q 039623          131 KIKIRRAIEAE---G--IQYTYVSCNCFAGYFLPT------------LAQIGAP-AP-PREKVTIFG------DGNAGAV  185 (292)
Q Consensus       131 K~~~e~~~~~~---~--~~~~~ir~~~~~~~~~~~------------~~~~~~~-~~-~~~~~~~~~------~~~~~~~  185 (292)
                      |..+|++++..   +  ++++++||+.++|.....            +...... .. .+..+.+++      ++++.++
T Consensus       161 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  240 (348)
T 1ek6_A          161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (348)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEe
Confidence            99999998752   4  999999998888763110            0000000 01 344455555      6788999


Q ss_pred             eeccchHHHHHHHhhcCCc-CCC-ceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          186 YNKEDDIATYTINSIDGPR-TLN-KTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~~~-~~~-~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      |+|++|+|++++.+++++. ..+ ++||++++. .+|++|+++.+.+.+|.++++...+
T Consensus       241 ~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  298 (348)
T 1ek6_A          241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGT-GYSVLQMVQAMEKASGKKIPYKVVA  298 (348)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSC-CEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             eEEHHHHHHHHHHHHhcccccCCceEEEeCCCC-CccHHHHHHHHHHHhCCCCceeeCC
Confidence            9999999999999997642 333 788887554 8999999999999999876655443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.97  E-value=1.4e-30  Score=225.93  Aligned_cols=229  Identities=17%  Similarity=0.243  Sum_probs=174.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ||+|||||||||||++++++|+++  |++|++++|+....   ..+.+..+...+++++.+|++|.+++.++++++|+||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG---NKANLEAILGDRVELVVGDIADAELVDKLAAKADAIV   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC---CGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC---ChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEE
Confidence            578999999999999999999998  89999999974321   1222233334689999999999999999999999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---------------cCCccCCCC
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---------------RSQNVVEPA  124 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---------------~~~~~~~~~  124 (292)
                      |+|+...               +.++.+++++|.+.+ + ++|+ |   +||....               .++.+..|.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS  158 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC
Confidence            9999753               567999999999998 7 7776 3   3553211               103344455


Q ss_pred             cchHHHHHHHHHHHHH----cCccEEEEecceecccccc--ccccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLP--TLAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..+|++++.    .+++++++||+.++|....  .+..... ....+..+.+++++++.++++|++|+|++++
T Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  238 (348)
T 1oc2_A          159 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW  238 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHH
Confidence            5666699999998875    4899999999998876432  1100000 0023445667788888999999999999999


Q ss_pred             HhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      .+++++ ..+++|++.++. .+|++|+++.+.+.+|.+.
T Consensus       239 ~~~~~~-~~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          239 AILTKG-RMGETYLIGADG-EKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             HHHHHC-CTTCEEEECCSC-EEEHHHHHHHHHHHTTCCT
T ss_pred             HHhhCC-CCCCeEEeCCCC-CCCHHHHHHHHHHHhCCCc
Confidence            999765 356789998655 8999999999999998764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.97  E-value=2.3e-31  Score=233.50  Aligned_cols=231  Identities=13%  Similarity=0.093  Sum_probs=174.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|||||||||||++++++|+++| ++|++++|+....    .+.+.  ...+++++.+|++|++++.++++++|+|||
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~----~~~l~--~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih  105 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE----KINVP--DHPAVRFSETSITDDALLASLQDEYDYVFH  105 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC----GGGSC--CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc----hhhcc--CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence            4789999999999999999999999 9999999974321    11111  145789999999999999999999999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHh-CCcceeec-c---CCCCCCc------cCCc---cC-CCCcchHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEA-GNVKRFLP-S---EFGNDVD------RSQN---VV-EPAKSAYA  129 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~-~~~~~~i~-s---~~g~~~~------~~~~---~~-~~~~~~~~  129 (292)
                      +|+...               +.++.+++++|++. + +++||+ |   +||....      + +.   +. .|...|..
T Consensus       106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E-~~~~~~~~~~~~~Y~~  183 (377)
T 2q1s_A          106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDAKATE-ETDIVSLHNNDSPYSM  183 (377)
T ss_dssp             CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC--------------C-CCCCCCSSCCCSHHHH
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCcCccc-ccccccccCCCCchHH
Confidence            999763               56799999999988 7 889987 3   3543221      2 22   33 45556666


Q ss_pred             HHHHHHHHHHH----cCccEEEEecceeccccc---------c------ccccCCC-CCCCCCceeecCCCcceEEeecc
Q 039623          130 DKIKIRRAIEA----EGIQYTYVSCNCFAGYFL---------P------TLAQIGA-PAPPREKVTIFGDGNAGAVYNKE  189 (292)
Q Consensus       130 ~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~---------~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v  189 (292)
                      +|..+|++++.    .+++++++||+.++|...         .      .+..... ....+.++.+++++++.++++|+
T Consensus       184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v  263 (377)
T 2q1s_A          184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFV  263 (377)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEH
Confidence            99999998875    489999999999988654         1      1100000 01234556667788889999999


Q ss_pred             chHHHH-HHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          190 DDIATY-TINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       190 ~D~a~~-~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +|+|++ ++.+++++. .+ +|++.++. .+|++|+++.+.+.+|.+.++...|
T Consensus       264 ~Dva~a~i~~~~~~~~-~g-~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~p  314 (377)
T 2q1s_A          264 EDVANGLIACAADGTP-GG-VYNIASGK-ETSIADLATKINEITGNNTELDRLP  314 (377)
T ss_dssp             HHHHHHHHHHHHHCCT-TE-EEECCCCC-CEEHHHHHHHHHHHHTCCSCCCCCC
T ss_pred             HHHHHHHHHHHHhcCC-CC-eEEecCCC-ceeHHHHHHHHHHHhCCCCCceeCC
Confidence            999999 999998765 44 88887655 8999999999999999876654444

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=6.1e-31  Score=222.26  Aligned_cols=216  Identities=14%  Similarity=0.157  Sum_probs=172.8

Q ss_pred             Cc-eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            1 MA-ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         1 m~-~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      |+ +|||||||||||+++++.|+++|++|++++|.                       .+|++|.+.+.++++  ++|+|
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~v   60 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHII   60 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEE
Confidence            65 89999999999999999999999999999995                       489999999999998  69999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc---CCccCCCCcchHHHHHHHH
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR---SQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K~~~e  135 (292)
                      ||+|+...               +.++.+++++|++.+ + ++|+ |   .||.....   ++.+..|.+.|..+|..+|
T Consensus        61 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E  138 (287)
T 3sc6_A           61 IHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGE  138 (287)
T ss_dssp             EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             EECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            99999764               567899999999998 7 5766 3   35543211   1455566667777999999


Q ss_pred             HHHHHcCccEEEEecceeccccccccccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcC
Q 039623          136 RAIEAEGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRP  214 (292)
Q Consensus       136 ~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~  214 (292)
                      ++++....+++++||+.++|.....+..... ....+..+...+  ++.++++|++|+|++++.+++++.  +++|++++
T Consensus       139 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~  214 (287)
T 3sc6_A          139 QFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL--YGTYHVSN  214 (287)
T ss_dssp             HHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC--CEEEECCC
T ss_pred             HHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC--CCeEEEcC
Confidence            9999988899999999998864332211100 013355566665  478999999999999999999876  67888886


Q ss_pred             CCccccHHHHHHHHHHHhCCCcceeecCHHHH
Q 039623          215 PGNVYSFNELVTLWENKIGKTLEKTYVAEEKL  246 (292)
Q Consensus       215 ~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~  246 (292)
                      ++ .+|++|+++.+.+.+|.+..+..++...+
T Consensus       215 ~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~  245 (287)
T 3sc6_A          215 TG-SCSWFEFAKKIFSYANMKVNVLPVSTEEF  245 (287)
T ss_dssp             BS-CEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred             CC-cccHHHHHHHHHHHcCCCcceeeeehhhc
Confidence            65 89999999999999999888888877654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.97  E-value=2.3e-30  Score=222.10  Aligned_cols=224  Identities=15%  Similarity=0.147  Sum_probs=175.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi   78 (292)
                      ||+|||||||||||++++++|+++|++|++++|+...     . .   +   +++++.+|++|.+++.+++++  +|+||
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~-~---l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-----K-L---P---NVEMISLDIMDSQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-----C-C---T---TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-----c-c---c---eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            5789999999999999999999999999999998432     1 1   1   789999999999999999985  99999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHh-CCcceeec-c---CCCCC--Cc---cCCccCCCCcchHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEA-GNVKRFLP-S---EFGND--VD---RSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~-~~~~~~i~-s---~~g~~--~~---~~~~~~~~~~~~~~~K~~  133 (292)
                      |+|+...               +.++.+++++|++. + ++++|+ |   +||..  ..   .++.+..|...|..+|..
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~  158 (321)
T 2pk3_A           80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKAS  158 (321)
T ss_dssp             ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHH
T ss_pred             EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHH
Confidence            9999754               56789999999876 5 788887 3   35543  11   113344555566669999


Q ss_pred             HHHHHHHc----CccEEEEecceeccccccc------cccCCCCCCC---C--CceeecCCCcceEEeeccchHHHHHHH
Q 039623          134 IRRAIEAE----GIQYTYVSCNCFAGYFLPT------LAQIGAPAPP---R--EKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       134 ~e~~~~~~----~~~~~~ir~~~~~~~~~~~------~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      +|++++..    +++++++||+.++|.....      +....   ..   +  .++..++++++.++++|++|+|++++.
T Consensus       159 ~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  235 (321)
T 2pk3_A          159 VGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQI---VDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWL  235 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHH---HHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHH---HHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHH
Confidence            99998763    8999999999988764321      11110   11   3  356677888889999999999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +++++ ..+++|++.++. .+|++|+++.+.+.+|.+.++...|
T Consensus       236 ~~~~~-~~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~p  277 (321)
T 2pk3_A          236 LSQYG-KTGDVYNVCSGI-GTRIQDVLDLLLAMANVKIDTELNP  277 (321)
T ss_dssp             HHHHC-CTTCEEEESCSC-EEEHHHHHHHHHHHSSSCCEEEECG
T ss_pred             HHhCC-CCCCeEEeCCCC-CeeHHHHHHHHHHHhCCCCceeecc
Confidence            99875 346789998655 8999999999999999877766554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.97  E-value=2e-30  Score=229.32  Aligned_cols=239  Identities=18%  Similarity=0.183  Sum_probs=174.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCC---------------cchhhHhhhhcCCcEEEECCCCCHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDP---------------VKGKLIEIFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~~~~~~~~~~v~~v~~D~~d~~   65 (292)
                      |++|||||||||||++++++|+++|++|++++|.......               ++...+......+++++.+|++|.+
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~   90 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   90 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence            6899999999999999999999999999999986211000               0011111123468999999999999


Q ss_pred             HHHHHHcc--CCEEEEcCcCCC------------------chhHHHHHHHHHHhCCc-ceeec-cC---CCCCCccC-C-
Q 039623           66 SLIKAIKQ--VDVVISTVSRGQ------------------IPEQAKIIAAVKEAGNV-KRFLP-SE---FGNDVDRS-Q-  118 (292)
Q Consensus        66 ~~~~~~~~--~d~vi~~a~~~~------------------~~~~~~l~~a~~~~~~~-~~~i~-s~---~g~~~~~~-~-  118 (292)
                      ++.+++++  +|+|||+||...                  +.++.+++++|++.+ + +++|+ |+   ||...... + 
T Consensus        91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~E~  169 (404)
T 1i24_A           91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEEG  169 (404)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCCCCcc
Confidence            99999987  999999998643                  457899999999988 6 58887 33   55432110 1 


Q ss_pred             --------------ccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccccc-------------------c
Q 039623          119 --------------NVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT-------------------L  161 (292)
Q Consensus       119 --------------~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~-------------------~  161 (292)
                                    .+..|.+.|..+|+.+|++++.    .+++++++||+.++|+....                   .
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  249 (404)
T 1i24_A          170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  249 (404)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhH
Confidence                          1334455566699999998764    48999999999998874321                   0


Q ss_pred             cc-CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCC--ceEEEcCCCccccHHHHHHHHHHH---hCCC
Q 039623          162 AQ-IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLN--KTLYIRPPGNVYSFNELVTLWENK---IGKT  235 (292)
Q Consensus       162 ~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~--~~~~~~~~~~~~t~~e~~~~~~~~---~~~~  235 (292)
                      .. .......++++.+++++++.++|+|++|+|++++.+++++...+  ++||+++  ..+|++|+++.+.+.   +|.+
T Consensus       250 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~--~~~s~~e~~~~i~~~~~~~g~~  327 (404)
T 1i24_A          250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT--EQFSVNELASLVTKAGSKLGLD  327 (404)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS--EEEEHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC--CCCcHHHHHHHHHHHHHhhCCC
Confidence            00 00000234556678888999999999999999999998765445  6888875  489999999999998   7876


Q ss_pred             cceeecC
Q 039623          236 LEKTYVA  242 (292)
Q Consensus       236 ~~~~~~~  242 (292)
                      .++...|
T Consensus       328 ~~~~~~p  334 (404)
T 1i24_A          328 VKKMTVP  334 (404)
T ss_dssp             CCEEEEC
T ss_pred             ccccccC
Confidence            6654444

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.97  E-value=4.8e-30  Score=221.65  Aligned_cols=226  Identities=17%  Similarity=0.255  Sum_probs=175.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC---C---CCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA---G---HPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~~   74 (292)
                      |+|||||||||||++++++|+++   |   ++|++++|+......++.   ..+ ...+++++.+|++|++++.+++.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL---APVDADPRLRFVHGDIRDAGLLARELRGV   77 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG---GGGTTCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh---hhcccCCCeEEEEcCCCCHHHHHHHhcCC
Confidence            58999999999999999999997   8   999999997432112222   222 1357899999999999999999999


Q ss_pred             CEEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHH
Q 039623           75 DVVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKI  132 (292)
Q Consensus        75 d~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~  132 (292)
                      |+|||+|+...               +.++.+++++|.+.+ +++||+ |   +||....   .++.+..|...|..+|.
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  156 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKA  156 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHH
Confidence            99999999653               578999999999998 889887 3   3664321   11334455566666999


Q ss_pred             HHHHHHHH----cCccEEEEecceecccccc------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          133 KIRRAIEA----EGIQYTYVSCNCFAGYFLP------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       133 ~~e~~~~~----~~~~~~~ir~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      .+|++++.    .+++++++||+.++|....      .+...   ...+..+.+++++++.++++|++|+|++++.++++
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  233 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTN---LLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG  233 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHH---HHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHH---HhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC
Confidence            99998864    5899999999998876431      11111   02345567778888999999999999999999976


Q ss_pred             CcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          203 PRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       203 ~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      +. .+++|++.++. .+|+.|+++.+.+.+|.+.
T Consensus       234 ~~-~g~~~~v~~~~-~~s~~e~~~~i~~~~g~~~  265 (337)
T 1r6d_A          234 GR-AGEIYHIGGGL-ELTNRELTGILLDSLGADW  265 (337)
T ss_dssp             CC-TTCEEEECCCC-EEEHHHHHHHHHHHHTCCG
T ss_pred             CC-CCCEEEeCCCC-CccHHHHHHHHHHHhCCCc
Confidence            53 46789998655 8999999999999999764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.97  E-value=2.2e-30  Score=221.37  Aligned_cols=225  Identities=19%  Similarity=0.223  Sum_probs=173.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||||||||||++++++|+++|++|++++|....    +.+   .+ ..+++++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----~~~---~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   72 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATG----KRE---NV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSH   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSC----CGG---GS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcC----chh---hc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999999999999985321    111   11 2468899999999999999998  7999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC----CCC-CC---ccCCccCCCCcchHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE----FGN-DV---DRSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~----~g~-~~---~~~~~~~~~~~~~~~~K~~~e  135 (292)
                      +|+...               +.++.+++++|++.+ ++++|+ |+    ||. ..   ..++.+..|...|..+|..+|
T Consensus        73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  151 (311)
T 2p5y_A           73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE  151 (311)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence            998753               567899999999988 889887 33    443 11   111334445556666999999


Q ss_pred             HHHHH----cCccEEEEecceeccccccc---------cccCCCCCCCCCceeec-----CCCcceEEeeccchHHHHHH
Q 039623          136 RAIEA----EGIQYTYVSCNCFAGYFLPT---------LAQIGAPAPPREKVTIF-----GDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       136 ~~~~~----~~~~~~~ir~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ++++.    .+++++++||+.++|+....         +....   ..+.++.++     +++.+.++++|++|+|++++
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  228 (311)
T 2p5y_A          152 HYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERV---LKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHA  228 (311)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHH---HHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHH---HcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHH
Confidence            98864    58999999999988864321         11110   134455566     77888999999999999999


Q ss_pred             HhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      .+++++   +++|++.++. .+|++|+++.+.+.+|.+.++...|
T Consensus       229 ~~~~~~---~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  269 (311)
T 2p5y_A          229 LALFSL---EGIYNVGTGE-GHTTREVLMAVAEAAGKAPEVQPAP  269 (311)
T ss_dssp             HHHHHC---CEEEEESCSC-CEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             HHHhCC---CCEEEeCCCC-CccHHHHHHHHHHHhCCCCCceeCC
Confidence            999764   7789988655 8999999999999999877766554

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.97  E-value=1.1e-30  Score=214.51  Aligned_cols=201  Identities=20%  Similarity=0.269  Sum_probs=164.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |+|+||||||+||++++++|+++|++|++++|+     +++.+   .+...++ +++.+|++  +++.+++.++|+|||+
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~-----~~~~~---~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~   91 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRN-----EEQGP---ELRERGASDIVVANLE--EDFSHAFASIDAVVFA   91 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGHH---HHHHTTCSEEEECCTT--SCCGGGGTTCSEEEEC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCCeEEEEECC-----hHHHH---HHHhCCCceEEEcccH--HHHHHHHcCCCEEEEC
Confidence            789999999999999999999999999999998     55543   3345689 99999998  6778888999999999


Q ss_pred             CcCCC-----------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEE
Q 039623           81 VSRGQ-----------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYV  148 (292)
Q Consensus        81 a~~~~-----------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~i  148 (292)
                      ||...           +.++.+++++|++.+ ++++|+ |+++..... ..+ .+...|..+|..+|++++..+++++++
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~-~~~-~~~~~Y~~sK~~~e~~~~~~gi~~~~l  168 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPD-QGP-MNMRHYLVAKRLADDELKRSSLDYTIV  168 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGG-GSC-GGGHHHHHHHHHHHHHHHHSSSEEEEE
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCC-CCh-hhhhhHHHHHHHHHHHHHHCCCCEEEE
Confidence            99764           678999999999998 899998 888765543 222 344556669999999999999999999


Q ss_pred             ecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHH
Q 039623          149 SCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLW  228 (292)
Q Consensus       149 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~  228 (292)
                      ||+.+++...            .+.......+...+++++++|+|++++.+++++...+++|++.++  ..+++|+++.+
T Consensus       169 rpg~v~~~~~------------~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~--~~~~~e~~~~i  234 (236)
T 3e8x_A          169 RPGPLSNEES------------TGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG--DTPIAKVVEQL  234 (236)
T ss_dssp             EECSEECSCC------------CSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC--SEEHHHHHHTC
T ss_pred             eCCcccCCCC------------CCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC--CcCHHHHHHHh
Confidence            9999988732            222333445555789999999999999999988777889998754  58999999876


Q ss_pred             H
Q 039623          229 E  229 (292)
Q Consensus       229 ~  229 (292)
                      +
T Consensus       235 ~  235 (236)
T 3e8x_A          235 G  235 (236)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.97  E-value=5e-30  Score=223.25  Aligned_cols=231  Identities=13%  Similarity=0.121  Sum_probs=172.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHcc--CCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQ--VDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi   78 (292)
                      |+|||||||||||++++++|+++|++|++++|+.... ..   ....+ ...+++++.+|++|++++.+++++  +|+||
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   85 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PS---LFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   85 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SC---HHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc-ch---hhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence            6899999999999999999999999999999984332 11   11111 145789999999999999999986  89999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc----cCCccCCCCcchHHHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD----RSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~----~~~~~~~~~~~~~~~K~~~e  135 (292)
                      |+|+...               +.++.+++++|++.+.++++|+ |   +||....    .++.+..|...|..+|..+|
T Consensus        86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  165 (357)
T 1rkx_A           86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  165 (357)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHH
Confidence            9999542               6778999999998754788887 3   3554321    10234445566666999999


Q ss_pred             HHHHHc-------------CccEEEEecceecccccc-------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          136 RAIEAE-------------GIQYTYVSCNCFAGYFLP-------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       136 ~~~~~~-------------~~~~~~ir~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ++++..             +++++++||+.++|....       .+....   ..+..+ .++++++.++|+|++|+|++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~---~~g~~~-~~~~~~~~~~~v~v~Dva~a  241 (357)
T 1rkx_A          166 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAF---EQSQPV-IIRNPHAIRPWQHVLEPLSG  241 (357)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHH---HTTCCE-ECSCTTCEECCEETHHHHHH
T ss_pred             HHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHH---hcCCCE-EECCCCCeeccEeHHHHHHH
Confidence            988753             899999999999876431       111110   223333 34556789999999999999


Q ss_pred             HHHhhcC----CcCCCceEEEcCC-CccccHHHHHHHHHHHhCCCcceee
Q 039623          196 TINSIDG----PRTLNKTLYIRPP-GNVYSFNELVTLWENKIGKTLEKTY  240 (292)
Q Consensus       196 ~~~~l~~----~~~~~~~~~~~~~-~~~~t~~e~~~~~~~~~~~~~~~~~  240 (292)
                      ++.+++.    +...+++||+++. ++.+|++|+++.+.+.+|.+..+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~  291 (357)
T 1rkx_A          242 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL  291 (357)
T ss_dssp             HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC
T ss_pred             HHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcccc
Confidence            9998874    2345678988753 3589999999999999998766543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.97  E-value=1.2e-29  Score=219.12  Aligned_cols=227  Identities=15%  Similarity=0.189  Sum_probs=171.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|||||||||||++++++|+++|  ++|++++|+....   +.+.+..+. ..+++++.+|++|.+++.+++.++|+||
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGS---NPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVV   80 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC---CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccC---chhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence            689999999999999999999986  8999999974321   111222221 4578999999999999999999999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      |+|+...               +.++.+++++|.+.+..++||+ |   +||....   .++.+..|...|..+|..+|+
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHH
Confidence            9999753               5689999999999872268887 3   3564321   113344555566669999999


Q ss_pred             HHHH----cCccEEEEecceecccccc------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCC
Q 039623          137 AIEA----EGIQYTYVSCNCFAGYFLP------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTL  206 (292)
Q Consensus       137 ~~~~----~~~~~~~ir~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  206 (292)
                      +++.    .+++++++||+.++|....      .+...   ...+..+.+++++++.++++|++|+|++++.+++++. .
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~  236 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIR---ASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-S  236 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHH---HHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHH---HHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-C
Confidence            8875    5899999999999886532      11111   0234567777888889999999999999999997643 4


Q ss_pred             CceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          207 NKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       207 ~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      +++|++.++. .+|+.|+++.+.+.+|.+.
T Consensus       237 g~~~~v~~~~-~~s~~e~~~~i~~~~g~~~  265 (336)
T 2hun_A          237 REIYNISAGE-EKTNLEVVKIILRLMGKGE  265 (336)
T ss_dssp             TCEEEECCSC-EECHHHHHHHHHHHTTCCS
T ss_pred             CCEEEeCCCC-cccHHHHHHHHHHHhCCCc
Confidence            6789998655 8999999999999999764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=2.9e-29  Score=217.85  Aligned_cols=230  Identities=13%  Similarity=0.159  Sum_probs=176.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-cCCcEEEECC-CCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-NLGVNVLYGD-LQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D-~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+|+||||||+||+++++.|+++|++|++++|+.+     +... +.+. ..+++++.+| ++|++++.++++++|+|||
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~~-~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIA-EELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC-----SHHH-HHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC-----hhhH-HHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            57999999999999999999999999999999843     3211 1222 2478999999 9999999999999999999


Q ss_pred             cCcCCC---chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceecc
Q 039623           80 TVSRGQ---IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAG  155 (292)
Q Consensus        80 ~a~~~~---~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~  155 (292)
                      +++...   ....++++++|++.+++++||+ |+.+.....   + .+..+|+.+|..+|+++++.+++++++||++|++
T Consensus        80 ~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~---~-~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg~~g~  155 (352)
T 1xgk_A           80 NTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG---P-WPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNN  155 (352)
T ss_dssp             CCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS---S-CCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGG
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccC---C-CCCccHHHHHHHHHHHHHHcCCCEEEEecceecC
Confidence            998652   3345999999998864788988 443311111   1 2346788899999999999999999999999887


Q ss_pred             ccccccccCCC-CCCCCCce--eecCCCcceEEeecc-chHHHHHHHhhcCCc--CCCceEEEcCCCccccHHHHHHHHH
Q 039623          156 YFLPTLAQIGA-PAPPREKV--TIFGDGNAGAVYNKE-DDIATYTINSIDGPR--TLNKTLYIRPPGNVYSFNELVTLWE  229 (292)
Q Consensus       156 ~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~v-~D~a~~~~~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~~~~  229 (292)
                      ++......... .....+..  .+.+++++.++++++ +|+|++++.+++++.  ..+++|+++ ++ .+|+.|+++.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~-~~-~~s~~e~~~~i~  233 (352)
T 1xgk_A          156 NFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT-FE-TLSPVQVCAAFS  233 (352)
T ss_dssp             GCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC-SE-EECHHHHHHHHH
T ss_pred             CchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe-cC-CCCHHHHHHHHH
Confidence            65432111100 00123333  346667889999999 899999999998652  257899988 34 799999999999


Q ss_pred             HHhCCCcceeecCH
Q 039623          230 NKIGKTLEKTYVAE  243 (292)
Q Consensus       230 ~~~~~~~~~~~~~~  243 (292)
                      +.+|.+.++..+|.
T Consensus       234 ~~~G~~~~~~~vp~  247 (352)
T 1xgk_A          234 RALNRRVTYVQVPK  247 (352)
T ss_dssp             HHHTSCEEEEECSS
T ss_pred             HHHCCCCceEECCH
Confidence            99999988888883

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=3.1e-30  Score=220.40  Aligned_cols=219  Identities=16%  Similarity=0.142  Sum_probs=169.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      |+|||||||||||++++++|+++  |++|++++|+..     +.+.     ..+++++.+|++|.+++.++++  ++|+|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~-----~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~v   72 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKL-----NTDV-----VNSGPFEVVNALDFNQIEHLVEVHKITDI   72 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCC-----SCHH-----HHSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCc-----cccc-----cCCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence            68999999999999999999998  899999999843     2211     2367899999999999999998  89999


Q ss_pred             EEcCcCCC--------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc----cCCccCCCCcchHHHHHHHH
Q 039623           78 ISTVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD----RSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        78 i~~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~----~~~~~~~~~~~~~~~K~~~e  135 (292)
                      ||+|+...              +.++.+++++|++.+ ++++|+ |   .||....    .++.+..|.+.|..+|..+|
T Consensus        73 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  151 (312)
T 2yy7_A           73 YLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGE  151 (312)
T ss_dssp             EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHH
T ss_pred             EECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHH
Confidence            99999753              567899999999988 889987 3   3554221    11334455566666999999


Q ss_pred             HHHHH----cCccEEEEecceeccccc-cc------cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          136 RAIEA----EGIQYTYVSCNCFAGYFL-PT------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       136 ~~~~~----~~~~~~~ir~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      ++++.    .+++++++||+.++|... +.      ..........++....++++++.++++|++|+|++++.+++++.
T Consensus       152 ~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  231 (312)
T 2yy7_A          152 RWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV  231 (312)
T ss_dssp             HHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred             HHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcc
Confidence            98864    489999999999887532 11      00000001234566777888889999999999999999998765


Q ss_pred             C---CCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          205 T---LNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       205 ~---~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      .   .+++||+++  +.+|++|+++.+.+.+|
T Consensus       232 ~~~~~~~~~ni~~--~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          232 EKIKIHSSYNLAA--MSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             GGCCCSSCEECCS--EEECHHHHHHHHHTTCT
T ss_pred             cccccCceEEeCC--CccCHHHHHHHHHHHCC
Confidence            3   247898874  48999999999999988

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=2.6e-30  Score=210.00  Aligned_cols=198  Identities=18%  Similarity=0.214  Sum_probs=157.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-HHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-HESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~~~d~vi~~   80 (292)
                      |+||||||||+||++++++|+++|++|++++|+.     ++.+.     ..+++++.+|++| ++++.++++++|+|||+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~-----~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV-----EQVPQ-----YNNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG-----GGSCC-----CTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc-----cchhh-----cCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            5899999999999999999999999999999983     33321     1689999999999 99999999999999999


Q ss_pred             CcCCC-------chhHHHHHHHHHHhCCcceeec-cCCCCCCccC--CccCCCCcchHHHHHHHHHHH-HHcCccEEEEe
Q 039623           81 VSRGQ-------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRS--QNVVEPAKSAYADKIKIRRAI-EAEGIQYTYVS  149 (292)
Q Consensus        81 a~~~~-------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~--~~~~~~~~~~~~~K~~~e~~~-~~~~~~~~~ir  149 (292)
                      +|...       +.++.+++++|++.+ ++++|+ |+.+......  +.+..|...|..+|..+|+++ +..+++++++|
T Consensus        71 ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilr  149 (219)
T 3dqp_A           71 SGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQ  149 (219)
T ss_dssp             CCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEE
T ss_pred             CcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEe
Confidence            99764       778999999999998 899987 5443322210  112223455666999999999 77899999999


Q ss_pred             cceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHH
Q 039623          150 CNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTL  227 (292)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~  227 (292)
                      |+.+++.....            ... .  ++..+++++++|+|++++.+++++...+++|++.+ + ..+++|+.+.
T Consensus       150 p~~v~g~~~~~------------~~~-~--~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~-g-~~~~~e~~~~  210 (219)
T 3dqp_A          150 PGALTEEEATG------------LID-I--NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHN-G-KTAIKEALES  210 (219)
T ss_dssp             ECSEECSCCCS------------EEE-E--SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEE-C-SEEHHHHHHT
T ss_pred             CceEecCCCCC------------ccc-c--CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCC-C-CccHHHHHHH
Confidence            99998763211            111 1  25678999999999999999998877788999964 3 5888888763

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-29  Score=218.73  Aligned_cols=229  Identities=12%  Similarity=0.078  Sum_probs=171.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHcc--CCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQ--VDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~--~d~v   77 (292)
                      ||+|||||||||||+++++.|+++|++|++++|+....   ....++.+ ...+++++.+|++|.+++.+++++  +|+|
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V   90 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD---TRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV   90 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC---CCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccc---cccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence            47899999999999999999999999999999985432   11122222 245789999999999999999985  7999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhCCc-ceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHH
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAGNV-KRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~~~-~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~  134 (292)
                      ||+|+...               +.++.+++++|++.+ + ++||+ |   .||....   .++.+..|.+.|..+|+.+
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~  169 (335)
T 1rpn_A           91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG  169 (335)
T ss_dssp             EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHH
Confidence            99999653               567899999999988 6 78887 3   3554322   1144445556666699999


Q ss_pred             HHHHHH----cCccEEEEecceecccccc-cc----ccCCC-CCCCCC-ceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLP-TL----AQIGA-PAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~-~~----~~~~~-~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |++++.    .+++++++||+.++|.... .+    ....+ ....+. ....++++++.++++|++|+|++++.+++++
T Consensus       170 e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~  249 (335)
T 1rpn_A          170 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  249 (335)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC
Confidence            998875    4899999998877765321 11    00000 001232 3345688899999999999999999999876


Q ss_pred             cCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          204 RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       204 ~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      .  +++|+++++. .+|++|+++.+.+.+|.+.
T Consensus       250 ~--~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          250 K--ADDYVVATGV-TTTVRDMCQIAFEHVGLDY  279 (335)
T ss_dssp             S--CCCEEECCSC-EEEHHHHHHHHHHTTTCCG
T ss_pred             C--CCEEEEeCCC-CccHHHHHHHHHHHhCCCc
Confidence            4  4789987655 8999999999999999763

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=1.5e-29  Score=223.28  Aligned_cols=239  Identities=18%  Similarity=0.244  Sum_probs=172.7

Q ss_pred             ceEEEEccCCcchHHHHHHHH-hCCCCEEEEecCCCCCC----CcchhhH----hhhh----cCC---cEEEECCCCCHH
Q 039623            2 AATLIIGGTGYIGKKILEASV-KAGHPTFALVRESTASD----PVKGKLI----EIFK----NLG---VNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~----~~~~~~~----~~~~----~~~---v~~v~~D~~d~~   65 (292)
                      |+|||||||||||++++++|+ ++|++|++++|+.....    .+..+.+    +.+.    ..+   ++++.+|++|++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            689999999999999999999 99999999999743210    0001111    1111    124   899999999999


Q ss_pred             HHHHHHc--c-CCEEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCC-------c-
Q 039623           66 SLIKAIK--Q-VDVVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDV-------D-  115 (292)
Q Consensus        66 ~~~~~~~--~-~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~-------~-  115 (292)
                      ++.++++  + +|+|||+|+...               +.++.+++++|++.+ +++||+ |   .||...       . 
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCccccccccc
Confidence            9999997  6 999999999753               568999999999988 889887 3   354332       1 


Q ss_pred             --cCCccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceecccccc-----------ccccCCC-----CCCCC--
Q 039623          116 --RSQNVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLP-----------TLAQIGA-----PAPPR--  171 (292)
Q Consensus       116 --~~~~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~-----------~~~~~~~-----~~~~~--  171 (292)
                        .++.+..|...|..+|+.+|++++.    .+++++++||+.++|....           .+.....     ....+  
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (397)
T 1gy8_A          162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (397)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCc
Confidence              1133444555666699999998875    4899999999999876321           1110000     00112  


Q ss_pred             ----------CceeecC------CCcceEEeeccchHHHHHHHhhcCCcCC-----C---ceEEEcCCCccccHHHHHHH
Q 039623          172 ----------EKVTIFG------DGNAGAVYNKEDDIATYTINSIDGPRTL-----N---KTLYIRPPGNVYSFNELVTL  227 (292)
Q Consensus       172 ----------~~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~~~-----~---~~~~~~~~~~~~t~~e~~~~  227 (292)
                                ..+.+++      ++++.++|+|++|+|++++.+++.+...     +   ++||++++. .+|++|+++.
T Consensus       242 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~  320 (397)
T 1gy8_A          242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSR-GYSVREVIEV  320 (397)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSC-CEEHHHHHHH
T ss_pred             cccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCC-cccHHHHHHH
Confidence                      2455665      6788999999999999999999764322     3   788887554 8999999999


Q ss_pred             HHHHhCCCcceeecC
Q 039623          228 WENKIGKTLEKTYVA  242 (292)
Q Consensus       228 ~~~~~~~~~~~~~~~  242 (292)
                      +.+.+|.+.++...+
T Consensus       321 i~~~~g~~~~~~~~~  335 (397)
T 1gy8_A          321 ARKTTGHPIPVRECG  335 (397)
T ss_dssp             HHHHHCCCCCEEEEC
T ss_pred             HHHHhCCCCCeeeCC
Confidence            999999876654433

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.97  E-value=2.5e-30  Score=221.71  Aligned_cols=223  Identities=17%  Similarity=0.194  Sum_probs=168.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|||||||||||++++++|+++|++|++++|+.... ..+.+.+.. ....+++++.+|+.          ++|+|||
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~   75 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPP-MIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH   75 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCC-SSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc-ccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence            36899999999999999999999999999999985421 011111111 11234566666654          8999999


Q ss_pred             cCcCCC--------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc---CCccCCCCcchHHHHHHHHHHH
Q 039623           80 TVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR---SQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        80 ~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      +|+...              +.++.+++++|++.+ +++||+ |   +||.....   ++.+..|.+.|..+|+.+|+++
T Consensus        76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            999754              457899999999999 999997 3   45543221   1445556666767999999998


Q ss_pred             HH----cCc-cEEEEecceecccccc------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCC
Q 039623          139 EA----EGI-QYTYVSCNCFAGYFLP------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLN  207 (292)
Q Consensus       139 ~~----~~~-~~~~ir~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  207 (292)
                      +.    .++ +++++||+.++|....      .+...   ...++.+.+++++++.++++|++|+|++++.+++++.. +
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g  230 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCAN---LLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S  230 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHH---HHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S
T ss_pred             HHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHH---HHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C
Confidence            86    588 9999999999886432      11111   13455677888899999999999999999999998765 5


Q ss_pred             ceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          208 KTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       208 ~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                       +|+++++. .+|+.|+++.+. .+|.+.++...|
T Consensus       231 -~~~i~~~~-~~s~~e~~~~i~-~~g~~~~~~~~~  262 (321)
T 3vps_A          231 -VVNFGSGQ-SLSVNDVIRILQ-ATSPAAEVARKQ  262 (321)
T ss_dssp             -EEEESCSC-CEEHHHHHHHHH-TTCTTCEEEEEC
T ss_pred             -eEEecCCC-cccHHHHHHHHH-HhCCCCccccCC
Confidence             88888665 899999999999 999887766544

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.97  E-value=2.1e-28  Score=211.48  Aligned_cols=238  Identities=17%  Similarity=0.235  Sum_probs=168.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||||||||||++++++|+++|++|++++|..... .+..+.+..+...+++++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcc-hhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            5899999999999999999999999999998753322 222222222224578999999999999999987  4999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---CccCCC-CcchHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QNVVEP-AKSAYADKIKIRR  136 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~~~~~-~~~~~~~K~~~e~  136 (292)
                      +||...               +.++.+++++|++.+ ++++|+ |   +||......   +.+..| ...|..+|..+|+
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~  158 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence            999643               567899999999988 889887 3   355322110   223323 4455569999999


Q ss_pred             HHHH----c-CccEEEEecceecccccccc------------ccCCCC--CCCCCceeecC------CCcceEEeeccch
Q 039623          137 AIEA----E-GIQYTYVSCNCFAGYFLPTL------------AQIGAP--APPREKVTIFG------DGNAGAVYNKEDD  191 (292)
Q Consensus       137 ~~~~----~-~~~~~~ir~~~~~~~~~~~~------------~~~~~~--~~~~~~~~~~~------~~~~~~~~i~v~D  191 (292)
                      +++.    . +++++++||+.++|......            ......  ......+.+++      ++++.++|+|++|
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D  238 (338)
T 1udb_A          159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD  238 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred             HHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHH
Confidence            8875    2 78999999877766421100            000000  00223344443      5678899999999


Q ss_pred             HHHHHHHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          192 IATYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       192 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +|++++.+++..  ...+++||++++. .+|++|+++.+.+.+|.+.++...+
T Consensus       239 va~a~~~~l~~~~~~~~~~~yni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  290 (338)
T 1udb_A          239 LADGHVVAMEKLANKPGVHIYNLGAGV-GNSVLDVVNAFSKACGKPVNYHFAP  290 (338)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEESCSC-CEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred             HHHHHHHHHhhhhccCCCcEEEecCCC-ceeHHHHHHHHHHHhCCCCcceeCC
Confidence            999999998753  2223688887554 8999999999999999876654443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.97  E-value=2.8e-29  Score=217.41  Aligned_cols=227  Identities=20%  Similarity=0.218  Sum_probs=168.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-HHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-HESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~~~d~vi~   79 (292)
                      |+|||||||||||++++++|+++ |++|++++|+     +++.+.+  ....+++++.+|++| .+.+.++++++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~-----~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG-----SDAISRF--LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC-----CGGGGGG--TTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC-----cchHHHh--hcCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            68999999999999999999998 8999999998     3333221  124579999999998 4678888999999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCccC---CccC-------CCCcchHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDRS---QNVV-------EPAKSAYAD  130 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~~---~~~~-------~~~~~~~~~  130 (292)
                      +|+...               +.++.+++++|++.+  +++|+ |+   ||......   +.+.       .|.+.|..+
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~s  151 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS  151 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHH
Confidence            998653               457889999999887  67776 43   54332110   1111       122345559


Q ss_pred             HHHHHHHHHH----cCccEEEEecceecccccccc----------cc-CCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTL----------AQ-IGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      |..+|++++.    .+++++++||+.++|......          .. .......+.++.+++++++.++++|++|+|++
T Consensus       152 K~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  231 (345)
T 2bll_A          152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA  231 (345)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHH
Confidence            9999998863    589999999999988753211          00 00001234566777888899999999999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          196 TINSIDGPR--TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      ++.+++++.  ..+++|++.+++..+|++|+++.+.+.+|.+..
T Consensus       232 ~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~  275 (345)
T 2bll_A          232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (345)
T ss_dssp             HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             HHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            999998764  457788887553479999999999999887544

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=2.9e-29  Score=218.68  Aligned_cols=229  Identities=16%  Similarity=0.192  Sum_probs=173.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      |+|||||||||||+++++.|++. |++|++++|+....   +.+.+..+ ...+++++.+|++|.+++.++++  ++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG---NLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC---CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCC---chhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            57999999999999999999998 79999999974321   12222222 13578999999999999999998  89999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHh--CCcc-------eeec-c---CCCCCC-------------cc
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEA--GNVK-------RFLP-S---EFGNDV-------------DR  116 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~--~~~~-------~~i~-s---~~g~~~-------------~~  116 (292)
                      ||+||...               +.++.+++++|.+.  + ++       +||+ |   +||...             ..
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~  156 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT  156 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence            99999753               57899999999998  7 76       8887 3   366432             11


Q ss_pred             CCccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccccc--cccCCC-CCCCCCceeecCCCcceEEeecc
Q 039623          117 SQNVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT--LAQIGA-PAPPREKVTIFGDGNAGAVYNKE  189 (292)
Q Consensus       117 ~~~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v  189 (292)
                      ++.+..|...|..+|..+|++++.    .+++++++||+.++|.....  +....+ ....+..+.+++++.+.++++|+
T Consensus       157 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  236 (361)
T 1kew_A          157 ETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (361)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEH
Confidence            133444556666699999998875    48999999999998875321  100000 00234556777888899999999


Q ss_pred             chHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          190 DDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       190 ~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      +|+|++++.+++++ ..+++|++.++. .+|+.|+++.+.+.+|.+.
T Consensus       237 ~Dva~a~~~~~~~~-~~g~~~~v~~~~-~~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          237 EDHARALHMVVTEG-KAGETYNIGGHN-EKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             HHHHHHHHHHHHHC-CTTCEEEECCCC-EEEHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCC-CCCCEEEecCCC-eeeHHHHHHHHHHHhCCcC
Confidence            99999999999765 346789998655 8999999999999988643

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.97  E-value=4.3e-29  Score=215.42  Aligned_cols=217  Identities=19%  Similarity=0.195  Sum_probs=165.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi   78 (292)
                      ||+|||||||||||++++++|+++|++|++++|+....    .+.+..+  .+++++.+|++|.+++.+++++  +|+||
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi   94 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR----REHLKDH--PNLTFVEGSIADHALVNQLIGDLQPDAVV   94 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC----GGGSCCC--TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc----hhhHhhc--CCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence            68999999999999999999999999999999974321    1111111  5789999999999999999987  99999


Q ss_pred             EcCcCCC------------chhHHHHHHHHHHhCCcceeec-c---CCC----CCCccC-CccCCCC-cchHHHHHHHHH
Q 039623           79 STVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-S---EFG----NDVDRS-QNVVEPA-KSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g----~~~~~~-~~~~~~~-~~~~~~K~~~e~  136 (292)
                      |+|+...            +.++.+++++|.+.+ +++||+ |   .||    ...... +.. .|. ..|..+|..+|+
T Consensus        95 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~-~p~~~~Y~~sK~~~E~  172 (333)
T 2q1w_A           95 HTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPR-NPANSSYAISKSANED  172 (333)
T ss_dssp             ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCC-CCTTCHHHHHHHHHHH
T ss_pred             ECceecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCC-CCCCCchHHHHHHHHH
Confidence            9998643            467899999999988 889887 3   354    211100 111 344 556669999999


Q ss_pred             HHHH-cCccEEEEecceeccccc-----cccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceE
Q 039623          137 AIEA-EGIQYTYVSCNCFAGYFL-----PTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL  210 (292)
Q Consensus       137 ~~~~-~~~~~~~ir~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  210 (292)
                      +++. .. +++++||+.++|...     +.+....   ..+.  .+++ +++.+++++++|+|++++.+++++.  +++|
T Consensus       173 ~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~---~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~  243 (333)
T 2q1w_A          173 YLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRL---SEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAY  243 (333)
T ss_dssp             HHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHH---HTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEE
T ss_pred             HHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHH---HcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEE
Confidence            9998 76 999999987776541     1111110   1222  3344 5778999999999999999998765  7788


Q ss_pred             EEcCCCccccHHHHHHHHHHHhCCC
Q 039623          211 YIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       211 ~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      ++.++. .+|++|+++.+.+.+|.+
T Consensus       244 ~v~~~~-~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          244 HFSSGT-DVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             ECSCSC-CEEHHHHHHHHHHHTTCS
T ss_pred             EeCCCC-CccHHHHHHHHHHHhCCC
Confidence            887655 899999999999999976

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.96  E-value=1.7e-29  Score=216.06  Aligned_cols=221  Identities=16%  Similarity=0.114  Sum_probs=167.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi   78 (292)
                      ||+|||||||||||++++++|+++|+      +.     ...        ..+++.+.+|++|.+++.+++++  +|+||
T Consensus         6 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~-----~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            6 SMRILVTGGSGLVGKAIQKVVADGAG------LP-----GED--------WVFVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCEEEEETCSSHHHHHHHHHHHTTTC------CT-----TCE--------EEECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhcCC------cc-----ccc--------ccccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            58999999999999999999999998      22     100        22455668999999999999986  99999


Q ss_pred             EcCcCCC----------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCccC---Cc----cCCCCc-chHHH
Q 039623           79 STVSRGQ----------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDRS---QN----VVEPAK-SAYAD  130 (292)
Q Consensus        79 ~~a~~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~~---~~----~~~~~~-~~~~~  130 (292)
                      |+|+...                +.++.+++++|++.+ +++||+ |+   ||......   +.    +..|.. +|..+
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~s  145 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYA  145 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHH
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHH
Confidence            9999753                678899999999998 999987 43   55432211   11    333444 25559


Q ss_pred             HHHHHHHHHH----cCccEEEEecceeccccccc----------cccCCC-CCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT----------LAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      |+.+|++++.    .+++++++||+.++|+....          +..... ....+.++.+++++++.++++|++|+|++
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  225 (319)
T 4b8w_A          146 KRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQL  225 (319)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHH
Confidence            9999998865    68999999999998865321          111100 01345677888999999999999999999


Q ss_pred             HHHhhcCCc-CCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          196 TINSIDGPR-TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       196 ~~~~l~~~~-~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ++.+++++. ..+++||++++. .+|+.|+++.+.+.+|.+.++...+
T Consensus       226 ~~~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  272 (319)
T 4b8w_A          226 FIWVLREYNEVEPIILSVGEED-EVSIKEAAEAVVEAMDFHGEVTFDT  272 (319)
T ss_dssp             HHHHHHHCCCSSCEEECCCGGG-CEEHHHHHHHHHHHTTCCSCEEEET
T ss_pred             HHHHHhccccCCceEEEecCCC-ceeHHHHHHHHHHHhCCCCcEEeCC
Confidence            999998743 345677776544 9999999999999999877766554

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.96  E-value=1.7e-29  Score=216.66  Aligned_cols=217  Identities=17%  Similarity=0.194  Sum_probs=167.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||||||||||++++++|+++|++|++++|+.                      .+|+.|.+++.++++  ++|+|||
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence            5899999999999999999999999999988751                      379999999999998  8999999


Q ss_pred             cCcCCC----------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---Cc----cCCCCc-chHHHH
Q 039623           80 TVSRGQ----------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---QN----VVEPAK-SAYADK  131 (292)
Q Consensus        80 ~a~~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~~----~~~~~~-~~~~~K  131 (292)
                      +|+...                +.++.+++++|++.+ ++++|+ |   +||......   +.    +..|.. .|..+|
T Consensus        62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  140 (321)
T 1e6u_A           62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  140 (321)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHH
Confidence            999753                567899999999998 889887 3   355322111   11    233333 455599


Q ss_pred             HHHHHHHHH----cCccEEEEecceeccccccc------cccCCCCC-C----CC-CceeecCCCcceEEeeccchHHHH
Q 039623          132 IKIRRAIEA----EGIQYTYVSCNCFAGYFLPT------LAQIGAPA-P----PR-EKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       132 ~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~------~~~~~~~~-~----~~-~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ..+|++++.    .+++++++||+.++|.....      +....+.. .    .+ .++.+++++++.++++|++|+|++
T Consensus       141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~  220 (321)
T 1e6u_A          141 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  220 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHH
Confidence            999999876    48999999999998865421      11000000 1    11 456678888999999999999999


Q ss_pred             HHHhhcCCcCC--------CceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          196 TINSIDGPRTL--------NKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       196 ~~~~l~~~~~~--------~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ++.+++++...        +++||++++. .+|++|+++.+.+.+|.+.++...+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~  274 (321)
T 1e6u_A          221 SIHVMELAHEVWLENTQPMLSHINVGTGV-DCTIRELAQTIAKVVGYKGRVVFDA  274 (321)
T ss_dssp             HHHHHHSCHHHHHHTSBTTBCCEEESCSC-CEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred             HHHHHhCcccccccccccCCceEEeCCCC-CccHHHHHHHHHHHhCCCCceEeCC
Confidence            99999876542        5789997655 8999999999999999877665544

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.96  E-value=2.1e-28  Score=211.93  Aligned_cols=225  Identities=17%  Similarity=0.241  Sum_probs=168.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|||||||||||++|+++|+++|++|++++|+.... ....   ..+ ...+++++.+|+.|.     .+.++|+|||
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~---~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih   97 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNV---EHWIGHENFELINHDVVEP-----LYIEVDQIYH   97 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGT---GGGTTCTTEEEEECCTTSC-----CCCCCSEEEE
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhh---hhhccCCceEEEeCccCCh-----hhcCCCEEEE
Confidence            47899999999999999999999999999999974322 1111   222 235789999999875     3568999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC---C-----ccCCCCcchHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS---Q-----NVVEPAKSAYADKI  132 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~---~-----~~~~~~~~~~~~K~  132 (292)
                      +|+...               +.++.+++++|++.+ + ++|+ |   +||......   +     .+..|...|..+|+
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  175 (343)
T 2b69_A           98 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR  175 (343)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHH
Confidence            999653               567899999999998 6 6665 3   355332110   1     23334444556999


Q ss_pred             HHHHHHHH----cCccEEEEecceeccccccc--------cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          133 KIRRAIEA----EGIQYTYVSCNCFAGYFLPT--------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       133 ~~e~~~~~----~~~~~~~ir~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .+|++++.    .+++++++||+.++|.....        +...   ...++.+.+++++++.++++|++|+|++++.++
T Consensus       176 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~  252 (343)
T 2b69_A          176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQ---ALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM  252 (343)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHH---HHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHH---HHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHH
Confidence            99998764    58999999999988764321        1111   024556777888899999999999999999999


Q ss_pred             cCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          201 DGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +.+.  +++|+++++. .+|+.|+++.+.+.+|.+.++...|
T Consensus       253 ~~~~--~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~p  291 (343)
T 2b69_A          253 NSNV--SSPVNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLS  291 (343)
T ss_dssp             TSSC--CSCEEESCCC-EEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             hcCC--CCeEEecCCC-CCcHHHHHHHHHHHhCCCCCceeCC
Confidence            8653  6789998665 8999999999999999877665554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.96  E-value=7.6e-29  Score=213.59  Aligned_cols=221  Identities=17%  Similarity=0.207  Sum_probs=165.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+||||||||+||++++++|+++|++|++++|+....    .+.++.+  .+++++.+|++|.+++.++++  ++|+|||
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih   94 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK----REVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTHVVH   94 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC----GGGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc----hhhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence            6899999999999999999999999999999974321    1111111  478999999999999999999  9999999


Q ss_pred             cCcCCC------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc--C--CccCCCCcchHHHHHHHHHHHH
Q 039623           80 TVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR--S--QNVVEPAKSAYADKIKIRRAIE  139 (292)
Q Consensus        80 ~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~--~--~~~~~~~~~~~~~K~~~e~~~~  139 (292)
                      +||...            +.++.+++++|.+.+ ++++|+ |   +||.....  .  +.. .|...|..+|+.+|++++
T Consensus        95 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~-~~~~~Y~~sK~~~e~~~~  172 (330)
T 2pzm_A           95 SAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT-APFTSYGISKTAGEAFLM  172 (330)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC-CCCSHHHHHHHHHHHHHH
T ss_pred             CCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC-CCCChHHHHHHHHHHHHH
Confidence            998642            467899999999988 889887 3   34432110  0  111 245566669999999999


Q ss_pred             HcCccEEEEecceecccccc-ccccCCCCCCCCCceeecCCCcceEEeeccchHHH-HHHHhhcCCcCCCceEEEcCCCc
Q 039623          140 AEGIQYTYVSCNCFAGYFLP-TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT-YTINSIDGPRTLNKTLYIRPPGN  217 (292)
Q Consensus       140 ~~~~~~~~ir~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~-~~~~~l~~~~~~~~~~~~~~~~~  217 (292)
                      ..+++++++||+.++++... .+..........+. ..++++. .+++++++|+|+ +++.+++++.  +++|++.++. 
T Consensus       173 ~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~-  247 (330)
T 2pzm_A          173 MSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGE-  247 (330)
T ss_dssp             TCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSC-
T ss_pred             HcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCC-
Confidence            88999999997776665321 11100000011112 3455566 889999999999 9999998754  7889988655 


Q ss_pred             cccHHHHHHHHHHHhCCC
Q 039623          218 VYSFNELVTLWENKIGKT  235 (292)
Q Consensus       218 ~~t~~e~~~~~~~~~~~~  235 (292)
                      .+|++|+++.+.+.+|.+
T Consensus       248 ~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          248 GHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             CEEHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHHhCCC
Confidence            899999999999999986

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=8.9e-30  Score=226.90  Aligned_cols=244  Identities=13%  Similarity=0.148  Sum_probs=176.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH------------hhhhcCCcEEEECCCCCHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI------------EIFKNLGVNVLYGDLQDHESLI   68 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------~~~~~~~v~~v~~D~~d~~~~~   68 (292)
                      ||+||||||||+||++++++|++.|++|++++|+....  +..+.+            ......++.++.+|++|++.+.
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE--IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHH--HHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChH--HHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            46899999999999999999999999999999984310  011111            1122478999999999988777


Q ss_pred             HHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCCC--CC-----c---cCCcc---CC
Q 039623           69 KAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFGN--DV-----D---RSQNV---VE  122 (292)
Q Consensus        69 ~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~--~~-----~---~~~~~---~~  122 (292)
                       .+.++|+|||+|+...            +.++.+++++|.+ + +++||+ |+.+.  ..     .   .++.+   ..
T Consensus       147 -~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~  223 (427)
T 4f6c_A          147 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQL  223 (427)
T ss_dssp             -CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCC
T ss_pred             -CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccccccCCC
Confidence             6778999999999754            6789999999998 6 788887 43222  10     0   00111   22


Q ss_pred             CCcchHHHHHHHHHHHHH---cCccEEEEecceeccccccccccC---------CC-CCCCCCceeecCCCcceEEeecc
Q 039623          123 PAKSAYADKIKIRRAIEA---EGIQYTYVSCNCFAGYFLPTLAQI---------GA-PAPPREKVTIFGDGNAGAVYNKE  189 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~i~v  189 (292)
                      +.+.|..+|+.+|++++.   .|++++++||+.++|.........         .+ .....+.++ .+.++..++++++
T Consensus       224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v  302 (427)
T 4f6c_A          224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFV  302 (427)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEH
T ss_pred             CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeH
Confidence            445566699999999986   789999999999998754321100         00 001222222 2345779999999


Q ss_pred             chHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHHHHHHHhCCCCh
Q 039623          190 DDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPL  257 (292)
Q Consensus       190 ~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (292)
                      +|+|++++.++..+. .+++|++.+++ .+++.|+++.+.+ ++    +..++.++|...+...+.++
T Consensus       303 ~DvA~ai~~~~~~~~-~g~~~~l~~~~-~~s~~el~~~i~~-~g----~~~~~~~~~~~~l~~~~~~~  363 (427)
T 4f6c_A          303 DTTARQIVALAQVNT-PQIIYHVLSPN-KMPVKSLLECVKR-KE----IELVSDESFNEILQKQDMYE  363 (427)
T ss_dssp             HHHHHHHHHHTTSCC-CCSEEEESCSC-CEEHHHHHHHHHS-SC----CEEECHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHHcCCC-CCCEEEecCCC-CCcHHHHHHHHHH-cC----CcccCHHHHHHHHHhcCchh
Confidence            999999999998876 78899998766 8999999999998 56    67788999998887766544

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=7e-29  Score=210.15  Aligned_cols=212  Identities=16%  Similarity=0.158  Sum_probs=165.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+|||||||||||++++++|+++|++|++++|+                       .+|++|.+++.++++  ++|+|||
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEEEE
Confidence            689999999999999999999999999999986                       379999999999998  7999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      +|+...               +.++.+++++|++.+ + ++|+ |   +|+....   .++.+..|.+.|..+|..+|++
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~  147 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF  147 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            999754               567899999999998 7 7776 3   3554321   1144444556666699999999


Q ss_pred             HHHcCccEEEEecceeccccccccccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCC
Q 039623          138 IEAEGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       138 ~~~~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      ++..+.+++++||+.++|. ...+..... ....+..+...+  ++.+++++++|+|++++.+++++  .+++|++.++.
T Consensus       148 ~~~~~~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~  222 (292)
T 1vl0_A          148 VKALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKG  222 (292)
T ss_dssp             HHHHCSSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBS
T ss_pred             HHhhCCCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCC
Confidence            9998889999999999876 222111100 001233444554  46899999999999999999875  57788887655


Q ss_pred             ccccHHHHHHHHHHHhCCCcceeecCHH
Q 039623          217 NVYSFNELVTLWENKIGKTLEKTYVAEE  244 (292)
Q Consensus       217 ~~~t~~e~~~~~~~~~~~~~~~~~~~~~  244 (292)
                       .+|+.|+++.+.+.+|.+.++..+|.+
T Consensus       223 -~~s~~e~~~~i~~~~g~~~~~~~~~~~  249 (292)
T 1vl0_A          223 -ICSWYDFAVEIFRLTGIDVKVTPCTTE  249 (292)
T ss_dssp             -CEEHHHHHHHHHHHHCCCCEEEEECST
T ss_pred             -CccHHHHHHHHHHHhCCCCceeecccc
Confidence             899999999999999988776666543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=3.6e-29  Score=203.23  Aligned_cols=202  Identities=18%  Similarity=0.220  Sum_probs=138.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ||||||||||+||+++++.|+++|++|++++|+     +++.+.   +. .+++++.+|++|.++  +++.++|+|||++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~~~---~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   69 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN-----AGKITQ---TH-KDINILQKDIFDLTL--SDLSDQNVVVDAY   69 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----SHHHHH---HC-SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC-----chhhhh---cc-CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence            689999999999999999999999999999998     555432   22 789999999999887  7889999999999


Q ss_pred             cCCC------chhHHHHHHHHHHhCCcceeec-cCCCCCCcc-------CCccCCCCcchHHHHHHHHHH--HH--HcCc
Q 039623           82 SRGQ------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDR-------SQNVVEPAKSAYADKIKIRRA--IE--AEGI  143 (292)
Q Consensus        82 ~~~~------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~-------~~~~~~~~~~~~~~K~~~e~~--~~--~~~~  143 (292)
                      |...      +..+++++++|++.+ ++++|+ |+.+.....       .+.+..|...|..+|...|.+  +.  ..++
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi  148 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEF  148 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTS
T ss_pred             cCCccccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCc
Confidence            9864      688999999999987 788876 543321111       022333444444499888876  55  5789


Q ss_pred             cEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHH
Q 039623          144 QYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNE  223 (292)
Q Consensus       144 ~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e  223 (292)
                      +++++||+.++++. +.....   ......+...+++   .++++++|+|++++.++++++..+++|+++++. ..+.+|
T Consensus       149 ~~~ivrp~~v~g~~-~~~~~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~-~~~~~~  220 (221)
T 3ew7_A          149 SWTYISPSAMFEPG-ERTGDY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKL-EHHHHH  220 (221)
T ss_dssp             CEEEEECSSCCCCC----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC---------
T ss_pred             cEEEEeCcceecCC-CccCce---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCC-cccccc
Confidence            99999999998762 111111   1222333333333   368999999999999999998889999999877 555443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=7.4e-28  Score=210.94  Aligned_cols=233  Identities=18%  Similarity=0.148  Sum_probs=169.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHHHcc--CC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKAIKQ--VD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~~--~d   75 (292)
                      |+|||||||||||+++++.|+++|++|++++|+......++.+.+...    ...+++++.+|++|.+++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999998543211122211100    235789999999999999999985  79


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhCCc---ceeec-c---CCCCCCc---cCCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAGNV---KRFLP-S---EFGNDVD---RSQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~---~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~  130 (292)
                      +|||+||...               +.++.+++++|.+.+ +   ++||+ |   +||....   .++.+..|...|..+
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s  183 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  183 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence            9999999753               567899999999988 7   78887 3   3554321   113344455566669


Q ss_pred             HHHHHHHHHH----cCccEEEEecceecccccc-ccc----cCCCC-CCCCC-ceeecCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFLP-TLA----QIGAP-APPRE-KVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~-~~~----~~~~~-~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |+.+|.+++.    .+++++++|+..++|+... .+.    ...+. ...+. ....++++++.++++|++|+|++++.+
T Consensus       184 K~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~  263 (375)
T 1t2a_A          184 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM  263 (375)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHH
Confidence            9999998875    4899999997766654221 110    00000 01122 334568888999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcce
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEK  238 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  238 (292)
                      ++++.  +++|+++++. .+|++|+++.+.+.+|.+.++
T Consensus       264 ~~~~~--~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~  299 (375)
T 1t2a_A          264 LQNDE--PEDFVIATGE-VHSVREFVEKSFLHIGKTIVW  299 (375)
T ss_dssp             HHSSS--CCCEEECCSC-CEEHHHHHHHHHHHTTCCEEE
T ss_pred             HhcCC--CceEEEeCCC-cccHHHHHHHHHHHhCCCccc
Confidence            98764  4788987655 899999999999999987543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.96  E-value=4.7e-29  Score=213.45  Aligned_cols=215  Identities=10%  Similarity=0.103  Sum_probs=148.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi~   79 (292)
                      |+|||||||||||++++++|+++|++|++++|+..     +         .+  ++.+|++|++++.+++++  +|+|||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~---------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA-----R---------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC-----C---------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            78999999999999999999999999999998732     1         12  778999999999999885  999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc--cCCccCCCCcchHHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD--RSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~--~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      +|+...               +.++.+++++|.+.+ + ++|+ |   +|+....  .++.+..|...|..+|..+|+++
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  144 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAV  144 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            998642               678999999999998 6 7776 3   3444111  11334455556666999999999


Q ss_pred             HHcCccEEEEecceecccccc---ccccCCCCC-C-CCCceeecCCCcceEEeeccchHHHHHHHhhcCC---cCCCceE
Q 039623          139 EAEGIQYTYVSCNCFAGYFLP---TLAQIGAPA-P-PREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP---RTLNKTL  210 (292)
Q Consensus       139 ~~~~~~~~~ir~~~~~~~~~~---~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~~  210 (292)
                      +..+.+++++||+.++|....   .+....... . .+..+...  +++.++++|++|+|++++.+++++   ...+++|
T Consensus       145 ~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  222 (315)
T 2ydy_A          145 LENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTF  222 (315)
T ss_dssp             HHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEE
T ss_pred             HHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeE
Confidence            999999999999998876433   111110000 1 23334333  366889999999999999998753   2457788


Q ss_pred             EEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          211 YIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       211 ~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      ++.++. .+|+.|+++.+.+.+|.+..
T Consensus       223 ~i~~~~-~~s~~e~~~~i~~~~g~~~~  248 (315)
T 2ydy_A          223 HWSGNE-QMTKYEMACAIADAFNLPSS  248 (315)
T ss_dssp             ECCCSC-CBCHHHHHHHHHHHTTCCCT
T ss_pred             EEcCCC-cccHHHHHHHHHHHhCCChh
Confidence            888655 89999999999999998654

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.96  E-value=1e-28  Score=209.74  Aligned_cols=218  Identities=12%  Similarity=0.126  Sum_probs=153.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||||||||||||++|++.|+++||+|++++|++..     .            -+..    .+...+.++++|+|||+|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----~------------~~~~----~~~~~~~l~~~d~vihla   59 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----G------------RITW----DELAASGLPSCDAAVNLA   59 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----T------------EEEH----HHHHHHCCCSCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----C------------eeec----chhhHhhccCCCEEEEec
Confidence            789999999999999999999999999999998431     1            0111    122345567999999999


Q ss_pred             cCCC-------------------chhHHHHHHHHHHhCCcc--eeec----cCCCCCCccC---CccCCCCcchHH-HHH
Q 039623           82 SRGQ-------------------IPEQAKIIAAVKEAGNVK--RFLP----SEFGNDVDRS---QNVVEPAKSAYA-DKI  132 (292)
Q Consensus        82 ~~~~-------------------~~~~~~l~~a~~~~~~~~--~~i~----s~~g~~~~~~---~~~~~~~~~~~~-~K~  132 (292)
                      +...                   +.++.++++++++.+ .+  ++++    +.||......   +.+..+ ..++. .+.
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~-~~~~~~~~~  137 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD-FDFFSNLVT  137 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC-SSHHHHHHH
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccccCCccc-cchhHHHHH
Confidence            7531                   567889999999887 44  3665    3466544322   333333 33444 555


Q ss_pred             HHHHHH--HHcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceE
Q 039623          133 KIRRAI--EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL  210 (292)
Q Consensus       133 ~~e~~~--~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  210 (292)
                      ..|...  ...+++++++||+.++|.....+.... .....+....++++++.++|||++|+|+++..+++++.. +++|
T Consensus       138 ~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~y  215 (298)
T 4b4o_A          138 KWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHML-LPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVL  215 (298)
T ss_dssp             HHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHH-HHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHH-HHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCC-CCeE
Confidence            544433  246789999999999876422211110 001223445678899999999999999999999998754 5689


Q ss_pred             EEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHH
Q 039623          211 YIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKL  246 (292)
Q Consensus       211 ~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~  246 (292)
                      |+++++ ++|++|+++.+++.+|++.. ..+|...+
T Consensus       216 n~~~~~-~~t~~e~~~~ia~~lgrp~~-~pvP~~~~  249 (298)
T 4b4o_A          216 NGVAPS-SATNAEFAQTFGAALGRRAF-IPLPSAVV  249 (298)
T ss_dssp             EESCSC-CCBHHHHHHHHHHHHTCCCC-CCBCHHHH
T ss_pred             EEECCC-ccCHHHHHHHHHHHhCcCCc-ccCCHHHH
Confidence            998776 99999999999999998653 44665443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=1.5e-29  Score=230.10  Aligned_cols=244  Identities=13%  Similarity=0.152  Sum_probs=179.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH------------hhhhcCCcEEEECCCCCHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI------------EIFKNLGVNVLYGDLQDHESLI   68 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------~~~~~~~v~~v~~D~~d~~~~~   68 (292)
                      ||+|||||||||||++|+++|.+.|++|++++|+....  +....+            ......+++++.+|+.|++.+.
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE--IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHH--HHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChH--HHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            57899999999999999999988899999999984310  011111            1123468999999999977776


Q ss_pred             HHHccCCEEEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCCC--CC-----c---cCCcc---CC
Q 039623           69 KAIKQVDVVISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFGN--DV-----D---RSQNV---VE  122 (292)
Q Consensus        69 ~~~~~~d~vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~--~~-----~---~~~~~---~~  122 (292)
                       ++.++|+|||||+...            +.++.+++++|++ + .+++|+ |+.+.  ..     .   .++.+   ..
T Consensus       228 -~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~  304 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQL  304 (508)
T ss_dssp             -CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBC
T ss_pred             -CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCccccccccccccc
Confidence             6678999999999754            7789999999998 5 688887 43332  10     0   00111   22


Q ss_pred             CCcchHHHHHHHHHHHHH---cCccEEEEecceeccccccccccC---------CC-CCCCCCceeecCCCcceEEeecc
Q 039623          123 PAKSAYADKIKIRRAIEA---EGIQYTYVSCNCFAGYFLPTLAQI---------GA-PAPPREKVTIFGDGNAGAVYNKE  189 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~i~v  189 (292)
                      +.+.|..+|+.+|++++.   .|++++++||+.++|.........         .+ .....+.++ .+.+++.++++++
T Consensus       305 ~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v  383 (508)
T 4f6l_B          305 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFV  383 (508)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcH
Confidence            445566699999999986   689999999999988754322100         00 002222333 3446889999999


Q ss_pred             chHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCHHHHHHHHHhCCCCh
Q 039623          190 DDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQDAPIPL  257 (292)
Q Consensus       190 ~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (292)
                      +|+|++++.++.++. .+++||++++. .+|+.|+++.+.+..     +..++.++|...+...+.++
T Consensus       384 ~DvA~ai~~~~~~~~-~~~~~nl~~~~-~~s~~el~~~i~~~~-----~~~~~~~~w~~~l~~~~~~~  444 (508)
T 4f6l_B          384 DTTARQIVALAQVNT-PQIIYHVLSPN-KMPVKSLLECVKRKE-----IELVSDESFNEILQKQDMYE  444 (508)
T ss_dssp             HHHHHHHHHHTTBCC-SCSEEEESCSC-EEEHHHHHHHHHSSC-----CEEECHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHHHHhCCC-CCCEEEeCCCC-CCCHHHHHHHHHHcC-----CcccCHHHHHHHHHhcCCcc
Confidence            999999999998876 68899998766 999999999998753     67788999998888776554

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=1.1e-28  Score=210.47  Aligned_cols=219  Identities=14%  Similarity=0.132  Sum_probs=152.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc-----CCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ-----VDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~-----~d~   76 (292)
                      +|||||||||||++++++|+++| ++|++++|+...   .+.   ..+.  ++. +.+|++|.+.+.+++++     +|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---~~~---~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG---TKF---VNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG---GGG---HHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCC---chh---hhcC--cce-eccccccHHHHHHHHhccccCCCcE
Confidence            69999999999999999999999 999999997431   111   1111  333 78899999999999875     999


Q ss_pred             EEEcCcCCC-------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHHH
Q 039623           77 VISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        77 vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      |||+|+...             +.++.+++++|++.+ + ++|+ |   .||....   .++.+..|.+.|..+|..+|+
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~  149 (310)
T 1eq2_A           72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDE  149 (310)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHH
T ss_pred             EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence            999998653             567899999999998 7 8876 3   3554322   113444555666669999999


Q ss_pred             HHHH----cCccEEEEecceeccccccc------cccCCC-CCCCCCceeecCCCcc-eEEeeccchHHHHHHHhhcCCc
Q 039623          137 AIEA----EGIQYTYVSCNCFAGYFLPT------LAQIGA-PAPPREKVTIFGDGNA-GAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       137 ~~~~----~~~~~~~ir~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      +++.    .+++++++||+.++|.....      +..... ....++.+.+++++++ .++++|++|+|++++.+++++.
T Consensus       150 ~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~  229 (310)
T 1eq2_A          150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV  229 (310)
T ss_dssp             HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC
Confidence            9876    37899999999998865321      100000 0023445566778888 8999999999999999998765


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                        +++|++.++. .+|++|+++.+.+.+|.+
T Consensus       230 --~~~~~i~~~~-~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          230 --SGIFNLGTGR-AESFQAVADATLAYHKKG  257 (310)
T ss_dssp             --CEEEEESCSC-CBCHHHHHHHC-------
T ss_pred             --CCeEEEeCCC-ccCHHHHHHHHHHHcCCC
Confidence              7789987655 899999999999999876

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.96  E-value=1.7e-28  Score=203.13  Aligned_cols=214  Identities=16%  Similarity=0.190  Sum_probs=162.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ||+|+||||||+||++++++|+++  |++|++++|+     +++.+.   + ..+++++.+|++|.+++.++++++|+||
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~-----~~~~~~---~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi   74 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKEK---I-GGEADVFIGDITDADSINPAFQGIDALV   74 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC-----HHHHHH---T-TCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC-----CCchhh---c-CCCeeEEEecCCCHHHHHHHHcCCCEEE
Confidence            578999999999999999999999  8999999998     444322   2 4578899999999999999999999999


Q ss_pred             EcCcCCC----------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCC--Ccch
Q 039623           79 STVSRGQ----------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEP--AKSA  127 (292)
Q Consensus        79 ~~a~~~~----------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~--~~~~  127 (292)
                      |++|...                            +.++.+++++|++.+ ++++|+ |+.+....  ..+..+  ...|
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~--~~~~~~~~~~~y  151 (253)
T 1xq6_A           75 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNP--DHPLNKLGNGNI  151 (253)
T ss_dssp             ECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCT--TCGGGGGGGCCH
T ss_pred             EeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCC--CCccccccchhH
Confidence            9998531                            356899999999998 899987 44432211  111111  1234


Q ss_pred             HHHHHHHHHHHHHcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCC
Q 039623          128 YADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLN  207 (292)
Q Consensus       128 ~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  207 (292)
                      ..+|..+|++++..+++++++||+.+++....... .    .......+++.   ..++++++|+|++++.+++++...+
T Consensus       152 ~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~-~----~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~~~~~~g  223 (253)
T 1xq6_A          152 LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-L----LVGKDDELLQT---DTKTVPRADVAEVCIQALLFEEAKN  223 (253)
T ss_dssp             HHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSSC-E----EEESTTGGGGS---SCCEEEHHHHHHHHHHHTTCGGGTT
T ss_pred             HHHHHHHHHHHHhCCCceEEEecceeecCCcchhh-h----hccCCcCCcCC---CCcEEcHHHHHHHHHHHHcCccccC
Confidence            45999999999999999999999999887432110 0    00000111211   3468999999999999999876667


Q ss_pred             ceEEEcCCC--ccccHHHHHHHHHHHhCC
Q 039623          208 KTLYIRPPG--NVYSFNELVTLWENKIGK  234 (292)
Q Consensus       208 ~~~~~~~~~--~~~t~~e~~~~~~~~~~~  234 (292)
                      ++|++.+++  +.+|++|+++.+.+.+|+
T Consensus       224 ~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          224 KAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             EEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             CEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            899998653  369999999999998876

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=4e-28  Score=212.33  Aligned_cols=233  Identities=16%  Similarity=0.160  Sum_probs=165.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHcc--CC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIKQ--VD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~--~d   75 (292)
                      ||+|||||||||||++++++|+++|++|++++|+......++.+.+...   ...+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            8999999999999999999999999999999998432101111111100   135789999999999999999985  79


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhCCc---ceeec-c---CCCCCCc---cCCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAGNV---KRFLP-S---EFGNDVD---RSQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~---~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~  130 (292)
                      +|||+|+...               +.++.+++++|++.+ +   +++|+ |   +||....   .++.+..|...|..+
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~s  159 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA  159 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHH
Confidence            9999998643               458899999999988 7   78887 3   3554321   113444555566669


Q ss_pred             HHHHHHHHHH----cCccEEEEecceeccccc-ccc----ccCCC-CCCCCC-ceeecCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFL-PTL----AQIGA-PAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~-~~~----~~~~~-~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|++++.    .+++++++|+..++|+.. +.+    ....+ ....+. ....++++++.++++|++|+|++++.+
T Consensus       160 K~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~  239 (372)
T 1db3_A          160 KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM  239 (372)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHH
Confidence            9999998874    489999999665554321 111    00000 001222 344568888999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      ++++.  +++||++++. .+|+.|+++.+.+.+|.+.+
T Consensus       240 ~~~~~--~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~  274 (372)
T 1db3_A          240 LQQEQ--PEDFVIATGV-QYSVRQFVEMAAAQLGIKLR  274 (372)
T ss_dssp             TSSSS--CCCEEECCCC-CEEHHHHHHHHHHTTTEEEE
T ss_pred             HhcCC--CceEEEcCCC-ceeHHHHHHHHHHHhCCCcc
Confidence            98764  4788887654 89999999999999987654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.96  E-value=2.9e-28  Score=212.13  Aligned_cols=227  Identities=14%  Similarity=0.139  Sum_probs=169.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-----cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-----QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-----~~d   75 (292)
                      |+|||||||||||++|+++|+++| ++|++++|+...   .+.   ..+  .++. +.+|++|.+.+.++++     ++|
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---~~~---~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG---TKF---VNL--VDLN-IADYMDKEDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG---GGG---GGT--TTSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc---chh---hcc--cCce-EeeecCcHHHHHHHHhhcccCCCC
Confidence            689999999999999999999999 999999997431   111   111  1333 7889999999999987     599


Q ss_pred             EEEEcCcCCC-------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHH
Q 039623           76 VVISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        76 ~vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e  135 (292)
                      +|||+|+...             +.++.+++++|++.+ + ++|+ |   +||....   .++.+..|...|..+|..+|
T Consensus       118 ~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E  195 (357)
T 2x6t_A          118 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFD  195 (357)
T ss_dssp             EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHH
T ss_pred             EEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHH
Confidence            9999999653             567899999999998 7 8876 3   3554322   11344455566666999999


Q ss_pred             HHHHH----cCccEEEEecceecccccc------ccccCCC-CCCCCCceeecCCCcc-eEEeeccchHHHHHHHhhcCC
Q 039623          136 RAIEA----EGIQYTYVSCNCFAGYFLP------TLAQIGA-PAPPREKVTIFGDGNA-GAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       136 ~~~~~----~~~~~~~ir~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      ++++.    .+++++++||+.++|....      ....... ....+..+.+++++++ .+++++++|+|++++.+++++
T Consensus       196 ~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~  275 (357)
T 2x6t_A          196 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG  275 (357)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcC
Confidence            99876    3789999999999876432      1100000 0023455667788888 999999999999999999876


Q ss_pred             cCCCceEEEcCCCccccHHHHHHHHHHHhCCC-cceeecC
Q 039623          204 RTLNKTLYIRPPGNVYSFNELVTLWENKIGKT-LEKTYVA  242 (292)
Q Consensus       204 ~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~-~~~~~~~  242 (292)
                      .  +++|++.++. .+|++|+++.+.+.+|.+ +.....+
T Consensus       276 ~--~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~  312 (357)
T 2x6t_A          276 V--SGIFNLGTGR-AESFQAVADATLAYHKKGQIEYIPFP  312 (357)
T ss_dssp             C--CEEEEESCSC-CEEHHHHHHHHHHHHTCCCCEEECCC
T ss_pred             C--CCeEEecCCC-cccHHHHHHHHHHHcCCCCceecCCC
Confidence            5  7889987655 899999999999999987 4333333

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.96  E-value=7.9e-28  Score=205.97  Aligned_cols=215  Identities=17%  Similarity=0.191  Sum_probs=163.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      +|||||||||||++++++|+++  |++|++++|+...     .        .+++++.+|++|++++.++++  ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~--------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD-----T--------GGIKFITLDVSNRDEIDRAVEKYSIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCC-----C--------TTCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcc-----c--------cCceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence            6999999999999999999998  7999999997432     1        156789999999999999998  899999


Q ss_pred             EcCcCCC--------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc----cCCccCCCCcchHHHHHHHHH
Q 039623           79 STVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD----RSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~----~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      |+|+...              +.++.+++++|++.+ ++++|+ |   +|+....    ..+.+..|.+.|..+|..+|+
T Consensus        68 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~  146 (317)
T 3ajr_A           68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAEL  146 (317)
T ss_dssp             ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHH
T ss_pred             ECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHH
Confidence            9999753              567899999999998 889887 3   3554311    113344455666669999999


Q ss_pred             HHHH----cCccEEEEecceeccccc-cc------cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          137 AIEA----EGIQYTYVSCNCFAGYFL-PT------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       137 ~~~~----~~~~~~~ir~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      +++.    .+++++++||+.+++... +.      ..........++....++++++.++++|++|+|++++.+++++..
T Consensus       147 ~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~  226 (317)
T 3ajr_A          147 LGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD  226 (317)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGG
T ss_pred             HHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcc
Confidence            8764    589999999666665421 11      000000012345566677788899999999999999999987643


Q ss_pred             ---CCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          206 ---LNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       206 ---~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                         .+++|++.+ + .+|++|+++.+.+.++
T Consensus       227 ~~~~g~~~~i~~-~-~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          227 KLVLRNGYNVTA-Y-TFTPSELYSKIKERIP  255 (317)
T ss_dssp             GCSSCSCEECCS-E-EECHHHHHHHHHTTCC
T ss_pred             ccccCceEecCC-c-cccHHHHHHHHHHHCC
Confidence               247888874 4 8999999999999887

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2.4e-28  Score=220.40  Aligned_cols=246  Identities=12%  Similarity=0.086  Sum_probs=173.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC---CCCEEEEecCCCCCCCcchhhH---------------hhhhcCCcEEEECCCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA---GHPTFALVRESTASDPVKGKLI---------------EIFKNLGVNVLYGDLQ   62 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~v~~v~~D~~   62 (292)
                      ||+|||||||||||++++++|++.   |++|++++|+....  ...+.+               ......+++++.+|++
T Consensus        73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE--DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH--HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH--HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            589999999999999999999998   89999999984311  011111               1112368999999998


Q ss_pred             ------CHHHHHHHHccCCEEEEcCcCCC-----------chhHHHHHHHHHHhCCcceeec-cC---CCCCCccC---C
Q 039623           63 ------DHESLIKAIKQVDVVISTVSRGQ-----------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDRS---Q  118 (292)
Q Consensus        63 ------d~~~~~~~~~~~d~vi~~a~~~~-----------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~~---~  118 (292)
                            |.+.+.++++++|+|||+|+...           +.++.+++++|++.+ +++||+ |+   |+......   +
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~~~E~  229 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTED  229 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCCcCCc
Confidence                  67789999999999999999753           778999999999988 888887 33   44322110   1


Q ss_pred             ccCCCC-----------cchHHHHHHHHHHHHH----cCccEEEEecceeccccc-ccc------ccCCC-CCCCCCcee
Q 039623          119 NVVEPA-----------KSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFL-PTL------AQIGA-PAPPREKVT  175 (292)
Q Consensus       119 ~~~~~~-----------~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~-~~~------~~~~~-~~~~~~~~~  175 (292)
                      .+..|.           +.|..+|+.+|++++.    .+++++++||+.++|... ...      ....+ .....+..+
T Consensus       230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P  309 (478)
T 4dqv_A          230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAP  309 (478)
T ss_dssp             SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEE
T ss_pred             ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCccc
Confidence            111111           2255699999999986    489999999999987522 100      00000 000111111


Q ss_pred             --ecC---C---CcceEEeeccchHHHHHHHhhcC----CcCCCceEEEcCCCcc--ccHHHHHHHHHHHhCCCcceeec
Q 039623          176 --IFG---D---GNAGAVYNKEDDIATYTINSIDG----PRTLNKTLYIRPPGNV--YSFNELVTLWENKIGKTLEKTYV  241 (292)
Q Consensus       176 --~~~---~---~~~~~~~i~v~D~a~~~~~~l~~----~~~~~~~~~~~~~~~~--~t~~e~~~~~~~~~~~~~~~~~~  241 (292)
                        ++.   +   +++.++++|++|+|++++.++.+    +...+++||++++. .  +|++|+++.+.+. |.+++. ..
T Consensus       310 ~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~-~~~~s~~el~~~l~~~-g~~~~~-i~  386 (478)
T 4dqv_A          310 RSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH-DDGIGLDEYVDWLIEA-GYPIRR-ID  386 (478)
T ss_dssp             SCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC-CSSCSHHHHHHHHHHT-TCSCEE-ES
T ss_pred             ccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC-CCCcCHHHHHHHHHHc-CCCccc-CC
Confidence              111   1   25678999999999999999876    44567899998766 5  9999999999985 665432 33


Q ss_pred             CHHHHHHHHHh
Q 039623          242 AEEKLLKDIQD  252 (292)
Q Consensus       242 ~~~~~~~~~~~  252 (292)
                      +.++|...+..
T Consensus       387 ~~~~w~~~l~~  397 (478)
T 4dqv_A          387 DFAEWLQRFEA  397 (478)
T ss_dssp             SHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            77888877754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.96  E-value=1e-28  Score=209.70  Aligned_cols=209  Identities=15%  Similarity=0.178  Sum_probs=161.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi~   79 (292)
                      |+|||||||||||++++++|+ +|++|++++|+.                   ..+.+|+.|.+++.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-------------------KEFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-------------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999 899999999972                   1357999999999999986  999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      +|+...               +.++.+++++|++.+ + ++|+ |   +||....   .++.+..|.+.|..+|..+|++
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  138 (299)
T 1n2s_A           61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA  138 (299)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence            998654               567899999999888 7 6776 3   3554322   1144455666666699999999


Q ss_pred             HHHcCccEEEEecceeccccccccccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--C-CCceEEEc
Q 039623          138 IEAEGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--T-LNKTLYIR  213 (292)
Q Consensus       138 ~~~~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~  213 (292)
                      ++....+++++||+.++|.....+..... ....+..+...+  ++.++++|++|+|++++.+++++.  . .+++|+++
T Consensus       139 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~  216 (299)
T 1n2s_A          139 LQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLV  216 (299)
T ss_dssp             HHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECC
T ss_pred             HHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEe
Confidence            99988899999999998764322111000 002234455554  478999999999999999998752  2 37788887


Q ss_pred             CCCccccHHHHHHHHHHHhCCC
Q 039623          214 PPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       214 ~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      +++ .+|++|+++.+.+.+|.+
T Consensus       217 ~~~-~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          217 AGG-TTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             CBS-CEEHHHHHHHHHHHHHHH
T ss_pred             CCC-CCCHHHHHHHHHHHhCCC
Confidence            655 899999999999999865

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.96  E-value=7.7e-28  Score=226.80  Aligned_cols=236  Identities=19%  Similarity=0.219  Sum_probs=172.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |+||||||||+||++++++|+++|++|++++|+.... .+..+.+..+...+++++.+|++|.+++.++++  ++|+|||
T Consensus        12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih   90 (699)
T 1z45_A           12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   90 (699)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcch-HHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence            6899999999999999999999999999999974322 112222233345689999999999999999998  8999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCC-------ccCCccCCCCcchHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDV-------DRSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~-------~~~~~~~~~~~~~~~~K~~  133 (292)
                      +|+...               +.++.+++++|++.+ ++++|+ |   +||...       ..++.+..|...|..+|+.
T Consensus        91 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  169 (699)
T 1z45_A           91 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA  169 (699)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred             CCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHH
Confidence            999754               567899999999998 899887 3   354321       1113334455566669999


Q ss_pred             HHHHHHH------cCccEEEEecceeccccccc------------cccCCC--CCCCCCceeecC------CCcceEEee
Q 039623          134 IRRAIEA------EGIQYTYVSCNCFAGYFLPT------------LAQIGA--PAPPREKVTIFG------DGNAGAVYN  187 (292)
Q Consensus       134 ~e~~~~~------~~~~~~~ir~~~~~~~~~~~------------~~~~~~--~~~~~~~~~~~~------~~~~~~~~i  187 (292)
                      +|++++.      .+++++++||+.++|.....            +.....  ....++++.+++      ++++.+++|
T Consensus       170 ~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  249 (699)
T 1z45_A          170 IENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYI  249 (699)
T ss_dssp             HHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEE
T ss_pred             HHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeE
Confidence            9998875      58999999998887753110            000000  001123444554      678899999


Q ss_pred             ccchHHHHHHHhhcCC------cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceee
Q 039623          188 KEDDIATYTINSIDGP------RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTY  240 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~~------~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~  240 (292)
                      |++|+|++++.+++..      ...+++||++++. .+|++|+++.+.+.+|.+.++..
T Consensus       250 ~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~-~~s~~el~~~i~~~~g~~~~~~~  307 (699)
T 1z45_A          250 HVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK-GSTVFEVYHAFCKASGIDLPYKV  307 (699)
T ss_dssp             EHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSC-CEEHHHHHHHHHHHHTCCCCC--
T ss_pred             EHHHHHHHHHHHHhhhhccccccCCceEEEECCCC-CCcHHHHHHHHHHHhCCCCCcee
Confidence            9999999999988642      2235688887655 89999999999999998766543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.95  E-value=4.2e-27  Score=188.88  Aligned_cols=193  Identities=19%  Similarity=0.214  Sum_probs=147.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+||||||+||++++++|+++|++|++++|++     ++.+   .+...+++++.+|++|++++.++++++|+|||++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~-----~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS-----SRLP---SEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG-----GGSC---SSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh-----hhcc---cccCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence            6899999999999999999999999999999983     3321   1124579999999999999999999999999999


Q ss_pred             cCCC--------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecce
Q 039623           82 SRGQ--------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNC  152 (292)
Q Consensus        82 ~~~~--------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~  152 (292)
                      +...        +..+.+++++|++.+ ++++|+ |+.+..... .....+...|..+|..+|+++++.+++++++||+.
T Consensus        76 ~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~-~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~  153 (206)
T 1hdo_A           76 GTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP-TKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPH  153 (206)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT-TCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSE
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCc-ccccccchhHHHHHHHHHHHHHhCCCCEEEEeCCc
Confidence            9653        567999999999998 899987 554322221 11111345566699999999999999999999999


Q ss_pred             eccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCC
Q 039623          153 FAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      +++.......           ........ ..++++++|+|++++.+++++...++.|++.++.
T Consensus       154 ~~~~~~~~~~-----------~~~~~~~~-~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          154 IGDQPLTGAY-----------TVTLDGRG-PSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             EECCCCCSCC-----------EEESSSCS-SCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             ccCCCCCcce-----------EecccCCC-CCCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            8544221110           00111100 0488999999999999999877678899998653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.95  E-value=6.3e-27  Score=205.46  Aligned_cols=231  Identities=16%  Similarity=0.121  Sum_probs=166.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h--hcC-CcEEEECCCCCHHHHHHHHcc--CC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F--KNL-GVNVLYGDLQDHESLIKAIKQ--VD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~-~v~~v~~D~~d~~~~~~~~~~--~d   75 (292)
                      |+|||||||||||+++++.|+++|++|++++|+......++.+.+.. .  ... +++++.+|++|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999854311111211110 0  012 789999999999999999985  79


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhCCcc-----eeec-c---CCCCCCc--cCCccCCCCcchHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAGNVK-----RFLP-S---EFGNDVD--RSQNVVEPAKSAYA  129 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~-----~~i~-s---~~g~~~~--~~~~~~~~~~~~~~  129 (292)
                      +|||+|+...               +.++.+++++|.+.+ ++     +||+ |   +||....  .++.+..|...|..
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~  187 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  187 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHH
Confidence            9999999753               567899999999887 76     8887 3   3554321  11334455566666


Q ss_pred             HHHHHHHHHHH----cCccEEEEecceeccccc-cccc----cCCC-CCCCCC-ceeecCCCcceEEeeccchHHHHHHH
Q 039623          130 DKIKIRRAIEA----EGIQYTYVSCNCFAGYFL-PTLA----QIGA-PAPPRE-KVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       130 ~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~-~~~~----~~~~-~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      +|..+|++++.    .+++++++|+..++++.. ..+.    ...+ ....+. ....++++++.++++|++|+|++++.
T Consensus       188 sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~  267 (381)
T 1n7h_A          188 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL  267 (381)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHH
Confidence            99999998875    488998888655544321 1110    0000 001122 23456788889999999999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      +++++.  +++|+++++. .+|++|+++.+.+.+|.+.
T Consensus       268 ~~~~~~--~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~  302 (381)
T 1n7h_A          268 MLQQEK--PDDYVVATEE-GHTVEEFLDVSFGYLGLNW  302 (381)
T ss_dssp             HHTSSS--CCEEEECCSC-EEEHHHHHHHHHHHTTCCG
T ss_pred             HHhCCC--CCeEEeeCCC-CCcHHHHHHHHHHHcCCCc
Confidence            998764  4789988655 8999999999999998753

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.95  E-value=8.9e-28  Score=209.45  Aligned_cols=227  Identities=15%  Similarity=0.151  Sum_probs=165.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-----CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-----HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ---   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~---   73 (292)
                      |+|||||||||||++++++|+++|     ++|++++|+....     .    +...+++++.+|++|.+++.+++++   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~-----~----~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   72 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA-----W----HEDNPINYVQCDISDPDDSQAKLSPLTD   72 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCS-----C----CCSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcc-----c----cccCceEEEEeecCCHHHHHHHHhcCCC
Confidence            789999999999999999999999     9999999985432     1    1245789999999999999999997   


Q ss_pred             CCEEEEcCcCCC----------chhHHHHHHHHHHh--CCcceee-------c-c---CCCCCC---c--cCCccCCC-C
Q 039623           74 VDVVISTVSRGQ----------IPEQAKIIAAVKEA--GNVKRFL-------P-S---EFGNDV---D--RSQNVVEP-A  124 (292)
Q Consensus        74 ~d~vi~~a~~~~----------~~~~~~l~~a~~~~--~~~~~~i-------~-s---~~g~~~---~--~~~~~~~~-~  124 (292)
                      +|+|||+|+...          +.++.+++++|++.  + +++++       + |   .||...   .  .++.+..| .
T Consensus        73 ~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~  151 (364)
T 2v6g_A           73 VTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYM  151 (364)
T ss_dssp             CCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSC
T ss_pred             CCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCccccCCccc
Confidence            999999999753          67899999999988  6 88886       3 3   355431   1  11222233 3


Q ss_pred             cchHHHHHHHHHHHHHcC-ccEEEEecceeccccccccccC-----CCCCC---CCCceeecCCCcce---EEeeccchH
Q 039623          125 KSAYADKIKIRRAIEAEG-IQYTYVSCNCFAGYFLPTLAQI-----GAPAP---PREKVTIFGDGNAG---AVYNKEDDI  192 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~~~-~~~~~ir~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~---~~~i~v~D~  192 (292)
                      +.|+.+...++++.+..+ ++++++||+.++|.........     .....   .+.++.+++++++.   .++++++|+
T Consensus       152 ~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv  231 (364)
T 2v6g_A          152 NFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI  231 (364)
T ss_dssp             CHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred             hhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence            455444444444443456 9999999999988644321110     00001   24445556666443   667778999


Q ss_pred             HHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          193 ATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      |++++.+++++...+++||++++. .+|++|+++.+.+.+|.+....
T Consensus       232 a~a~~~~~~~~~~~g~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~  277 (364)
T 2v6g_A          232 AEHHIWAAVDPYAKNEAFNVSNGD-VFKWKHFWKVLAEQFGVECGEY  277 (364)
T ss_dssp             HHHHHHHHHCGGGTTEEEEECCSC-CBCHHHHHHHHHHHHTCCBCCC
T ss_pred             HHHHHHHHhCCCCCCceEEecCCC-cCCHHHHHHHHHHHhCCCCCCC
Confidence            999999998875567799998655 8999999999999999876543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=1e-27  Score=207.57  Aligned_cols=210  Identities=17%  Similarity=0.242  Sum_probs=164.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CC-CEEEEecCCCCCCCcchhhHh-hhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GH-PTFALVRESTASDPVKGKLIE-IFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+||||||||+||++++++|++. |+ +|++++|+     +.+...+. .+...+++++.+|++|.+++.++++++|+||
T Consensus        22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~-----~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vi   96 (344)
T 2gn4_A           22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD-----ELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICI   96 (344)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC-----HHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC-----hhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence            68999999999999999999999 97 99999998     55443332 2334689999999999999999999999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH--
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA--  140 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~--  140 (292)
                      |+||...               +.++.+++++|.+.+ ++++|+ |+..        ...|.+.|..+|..+|++++.  
T Consensus        97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~--------~~~p~~~Y~~sK~~~E~~~~~~~  167 (344)
T 2gn4_A           97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDK--------AANPINLYGATKLCSDKLFVSAN  167 (344)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGG--------GSSCCSHHHHHHHHHHHHHHHGG
T ss_pred             ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCc--------cCCCccHHHHHHHHHHHHHHHHH
Confidence            9999754               567899999999998 999988 5421        123456677799999999985  


Q ss_pred             -----cCccEEEEecceeccccc---cccccCCCCCCCCC-ceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEE
Q 039623          141 -----EGIQYTYVSCNCFAGYFL---PTLAQIGAPAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLY  211 (292)
Q Consensus       141 -----~~~~~~~ir~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  211 (292)
                           .+++++++||+.++|...   +.+....   ..+. ++.+ .+++..+++++++|+|++++.+++++. .+++|+
T Consensus       168 ~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~---~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~  242 (344)
T 2gn4_A          168 NFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLV---QNKASEIPI-TDIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFV  242 (344)
T ss_dssp             GCCCSSCCEEEEECCCEETTCTTSHHHHHHHHH---HHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEE
T ss_pred             HHhCCCCcEEEEEEeccEECCCCCHHHHHHHHH---HcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEe
Confidence                 368999999999998532   2222110   1233 4444 367788999999999999999998753 466787


Q ss_pred             EcCCCccccHHHHHHHHHHHh
Q 039623          212 IRPPGNVYSFNELVTLWENKI  232 (292)
Q Consensus       212 ~~~~~~~~t~~e~~~~~~~~~  232 (292)
                      +.+ + .+|+.|+++.+.+.+
T Consensus       243 ~~~-~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          243 PKI-P-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             ECC-C-EEEHHHHHHHHCTTC
T ss_pred             cCC-C-cEEHHHHHHHHHHhC
Confidence            754 3 699999999998654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.95  E-value=1.2e-26  Score=200.70  Aligned_cols=230  Identities=14%  Similarity=0.087  Sum_probs=167.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHcc--CCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQ--VDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi   78 (292)
                      |+|||||||||||++++++|+++|++|++++|+.....   .+.++.+ ...+++++.+|++|.+++.+++++  +|+||
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFA---SWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTT---THHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc---cccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            68999999999999999999999999999999854321   1122222 124789999999999999999985  69999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCc-ceeec-c---CCCCCCc---cCCccCCCCcchHHHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNV-KRFLP-S---EFGNDVD---RSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~-~~~i~-s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e  135 (292)
                      |+||...               +.++.+++++|.+.+ + +++|+ |   .||....   .++.+..|...|..+|..+|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e  159 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGH  159 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHH
Confidence            9999743               567999999999887 7 78887 3   3554322   11334445556666999999


Q ss_pred             HHHHH----cCccEEEEeccee-ccccccccccC----CC-CCCCCC-ceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          136 RAIEA----EGIQYTYVSCNCF-AGYFLPTLAQI----GA-PAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       136 ~~~~~----~~~~~~~ir~~~~-~~~~~~~~~~~----~~-~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      .+++.    .+++++++|+..+ ++.........    .. ....+. .....+++++.++++|++|+|++++.+++++.
T Consensus       160 ~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~  239 (345)
T 2z1m_A          160 WITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE  239 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            98875    4788888875444 43322211100    00 001122 23356777889999999999999999998764


Q ss_pred             CCCceEEEcCCCccccHHHHHHHHHHHhCCCcce
Q 039623          205 TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEK  238 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~  238 (292)
                        +++||++++. .+|++|+++.+.+.+|.+.++
T Consensus       240 --~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~  270 (345)
T 2z1m_A          240 --PDDYVIATGE-THTVREFVEKAAKIAGFDIEW  270 (345)
T ss_dssp             --CCCEEECCSC-CEEHHHHHHHHHHHTTCCEEE
T ss_pred             --CceEEEeCCC-CccHHHHHHHHHHHhCCCccc
Confidence              4688887655 899999999999999987554

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.95  E-value=4.7e-28  Score=209.37  Aligned_cols=225  Identities=15%  Similarity=0.089  Sum_probs=162.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEE-ECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVL-YGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v-~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+|||||||||||++++++|+++|++|++++|+     .++.+.+...    ...+++++ .+|++|.+++.++++++|+
T Consensus        12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A           12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----cccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            689999999999999999999999999999998     4444332222    12578888 8999999999999999999


Q ss_pred             EEEcCcCCC------------chhHHHHHHHHHH-hCCcceeec-cC---CCCCCc-------cCCc-------------
Q 039623           77 VISTVSRGQ------------IPEQAKIIAAVKE-AGNVKRFLP-SE---FGNDVD-------RSQN-------------  119 (292)
Q Consensus        77 vi~~a~~~~------------~~~~~~l~~a~~~-~~~~~~~i~-s~---~g~~~~-------~~~~-------------  119 (292)
                      |||+|+...            +.++.+++++|.+ .+ ++++|+ |+   |+....       .++.             
T Consensus        87 vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  165 (342)
T 1y1p_A           87 VAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             EEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             EEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccc
Confidence            999999753            6789999999985 45 888887 33   332211       0011             


Q ss_pred             ---cCCCCcchHHHHHHHHHHHHHc------CccEEEEecceecccccccccc------CCCCCCCCCceeecCCCcceE
Q 039623          120 ---VVEPAKSAYADKIKIRRAIEAE------GIQYTYVSCNCFAGYFLPTLAQ------IGAPAPPREKVTIFGDGNAGA  184 (292)
Q Consensus       120 ---~~~~~~~~~~~K~~~e~~~~~~------~~~~~~ir~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  184 (292)
                         +..|.+.|..+|..+|++++..      +++++++||+.++|........      .......+....+.+.+ +.+
T Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  244 (342)
T 1y1p_A          166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQ  244 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSE
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcC
Confidence               1123345555999999988752      6889999999998864322100      00000223333344444 678


Q ss_pred             EeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          185 VYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       185 ~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      +++|++|+|++++.+++++...++.+++.  +..+|+.|+++.+.+.+|..
T Consensus       245 ~~v~v~Dva~a~~~~~~~~~~~g~~~~~~--g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          245 YYVSAVDIGLLHLGCLVLPQIERRRVYGT--AGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTCCSCEEEEC--CEEECHHHHHHHHHHHCTTS
T ss_pred             CEeEHHHHHHHHHHHHcCcccCCceEEEe--CCCCCHHHHHHHHHHHCCCc
Confidence            99999999999999998754445555444  34899999999999999864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.95  E-value=4.4e-27  Score=220.13  Aligned_cols=223  Identities=22%  Similarity=0.257  Sum_probs=167.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHH-HHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHES-LIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~-~~~~~~~~d~vi   78 (292)
                      ||+|||||||||||++++++|+++ |++|++++|+...     .+.+  ....+++++.+|++|.++ +.++++++|+||
T Consensus       315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~-----~~~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vi  387 (660)
T 1z7e_A          315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-----ISRF--LNHPHFHFVEGDISIHSEWIEYHVKKCDVVL  387 (660)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTT-----TGGG--TTCTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchh-----hhhh--ccCCceEEEECCCCCcHHHHHHhhcCCCEEE
Confidence            468999999999999999999998 8999999998432     2111  124579999999999765 777888999999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCccC---Ccc------C-CCCcchHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDRS---QNV------V-EPAKSAYA  129 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~~---~~~------~-~~~~~~~~  129 (292)
                      |+|+...               +.++.+++++|++.+  +++|+ |+   ||......   +.+      . .|.+.|..
T Consensus       388 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~  465 (660)
T 1z7e_A          388 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  465 (660)
T ss_dssp             ECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred             ECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHH
Confidence            9998653               567899999999887  77776 43   54322110   111      1 22334555


Q ss_pred             HHHHHHHHHHH----cCccEEEEecceeccccccc--------------cccCCCCCCCCCceeecCCCcceEEeeccch
Q 039623          130 DKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT--------------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDD  191 (292)
Q Consensus       130 ~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (292)
                      +|+.+|++++.    .+++++++||+.++|.....              +...   ...+.++.+++++++.++|+|++|
T Consensus       466 sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~g~g~~~~~~i~v~D  542 (660)
T 1z7e_A          466 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN---LVEGSPIKLIDGGKQKRCFTDIRD  542 (660)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHH---HHHTCCEEEEGGGCCEEECEEHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHH---HHcCCCcEEeCCCCeEEEEEEHHH
Confidence            99999998853    58999999999998765321              1111   123556667778888999999999


Q ss_pred             HHHHHHHhhcCCc--CCCceEEEcCCCccccHHHHHHHHHHHhCCC
Q 039623          192 IATYTINSIDGPR--TLNKTLYIRPPGNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       192 ~a~~~~~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~  235 (292)
                      +|++++.+++++.  ..+++|++.+++..+|+.|+++.+.+.+|.+
T Consensus       543 va~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T 1z7e_A          543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH  588 (660)
T ss_dssp             HHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence            9999999998764  3567888875433799999999999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.4e-26  Score=200.27  Aligned_cols=225  Identities=13%  Similarity=0.053  Sum_probs=164.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-------CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-------HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~   73 (292)
                      |+|||||||||||++++++|+++|       ++|++++|+....     ..   ....+++++.+|++|++++.++++ +
T Consensus        15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~-----~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~   86 (342)
T 2hrz_A           15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA-----PA---GFSGAVDARAADLSAPGEAEKLVEAR   86 (342)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCC-----CT---TCCSEEEEEECCTTSTTHHHHHHHTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcc-----cc---ccCCceeEEEcCCCCHHHHHHHHhcC
Confidence            689999999999999999999999       8999999984322     00   124568899999999999999995 8


Q ss_pred             CCEEEEcCcCCC--------------chhHHHHHHHHHHhC----Ccceeec-c---CCCCCCc---cCCccCCCCcchH
Q 039623           74 VDVVISTVSRGQ--------------IPEQAKIIAAVKEAG----NVKRFLP-S---EFGNDVD---RSQNVVEPAKSAY  128 (292)
Q Consensus        74 ~d~vi~~a~~~~--------------~~~~~~l~~a~~~~~----~~~~~i~-s---~~g~~~~---~~~~~~~~~~~~~  128 (292)
                      +|+|||+|+...              +.++.+++++|++.+    .++++|+ |   +||....   .++.+..|...|.
T Consensus        87 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~  166 (342)
T 2hrz_A           87 PDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYG  166 (342)
T ss_dssp             CSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHH
T ss_pred             CCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHH
Confidence            999999999653              567899999998764    2678886 3   3553211   1144444556666


Q ss_pred             HHHHHHHHHHHH----cCccEEEEecceecc-ccccc-----cccCCC-CCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          129 ADKIKIRRAIEA----EGIQYTYVSCNCFAG-YFLPT-----LAQIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       129 ~~K~~~e~~~~~----~~~~~~~ir~~~~~~-~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .+|..+|+++..    .+++++++|++.+++ +....     +....+ ....+....+...++...+++|++|+|++++
T Consensus       167 ~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~  246 (342)
T 2hrz_A          167 TQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLI  246 (342)
T ss_dssp             HHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHH
Confidence            699999998875    368899999877764 32211     100000 0023444445555566788999999999999


Q ss_pred             HhhcCCcC---CCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          198 NSIDGPRT---LNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       198 ~~l~~~~~---~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      .+++.+..   .+++|++.  ++.+|++|+++.+.+.+|.+.
T Consensus       247 ~~~~~~~~~~~~~~~~ni~--g~~~s~~e~~~~i~~~~g~~~  286 (342)
T 2hrz_A          247 HGAMIDVEKVGPRRNLSMP--GLSATVGEQIEALRKVAGEKA  286 (342)
T ss_dssp             HHHHSCHHHHCSCCEEECC--CEEEEHHHHHHHHHHHHCHHH
T ss_pred             HHHhccccccCCccEEEcC--CCCCCHHHHHHHHHHHcCccc
Confidence            99987643   46788885  347999999999999998764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.95  E-value=9.7e-28  Score=209.78  Aligned_cols=196  Identities=17%  Similarity=0.216  Sum_probs=154.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |||||||||||+|++|+++|+++|+ +|++++|+                           .|++++.++++++|+|||+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~   53 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL   53 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence            6899999999999999999999998 77777663                           4788899999999999999


Q ss_pred             CcCCC-----------chhHHHHHHHHHHhCCcc-eeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH----cCc
Q 039623           81 VSRGQ-----------IPEQAKIIAAVKEAGNVK-RFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA----EGI  143 (292)
Q Consensus        81 a~~~~-----------~~~~~~l~~a~~~~~~~~-~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~----~~~  143 (292)
                      |+...           +.++.+++++|++.+ ++ ++|+ |+.+..         +.++|..+|..+|++++.    .++
T Consensus        54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~---------~~~~Y~~sK~~~E~~~~~~~~~~g~  123 (369)
T 3st7_A           54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQAT---------QDNPYGESKLQGEQLLREYAEEYGN  123 (369)
T ss_dssp             CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGG---------SCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhc---------CCCCchHHHHHHHHHHHHHHHHhCC
Confidence            98753           678999999999988 77 8887 443211         135666699999999986    789


Q ss_pred             cEEEEecceeccccccc--------cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCC-CceEEEcC
Q 039623          144 QYTYVSCNCFAGYFLPT--------LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTL-NKTLYIRP  214 (292)
Q Consensus       144 ~~~~ir~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~-~~~~~~~~  214 (292)
                      +++++||+.++|.....        +....   ..+..+. ..++++.++++|++|+|++++.+++++... +++|++.+
T Consensus       124 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~  199 (369)
T 3st7_A          124 TVYIYRWPNLFGKWCKPNYNSVIATFCYKI---ARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPN  199 (369)
T ss_dssp             CEEEEEECEEECTTCCTTSSCHHHHHHHHH---HTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSC
T ss_pred             CEEEEECCceeCCCCCCCcchHHHHHHHHH---HcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCC
Confidence            99999999998864321        11110   2233333 357788999999999999999999987654 67888875


Q ss_pred             CCccccHHHHHHHHHHHhCCCccee
Q 039623          215 PGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       215 ~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      + +.+|+.|+++.+.+.+|.+.++.
T Consensus       200 ~-~~~s~~e~~~~~~~~~g~~~~~~  223 (369)
T 3st7_A          200 V-FKVTLGEIVDLLYKFKQSRLDRT  223 (369)
T ss_dssp             C-EEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             C-CceeHHHHHHHHHHHhCCCcccc
Confidence            5 49999999999999988764433

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=2.5e-27  Score=198.14  Aligned_cols=213  Identities=15%  Similarity=0.075  Sum_probs=165.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+||||||||+||++++++|+++|++|++++|+....    .       ..+++++.+|++|++++.++++++|+|||+|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~-------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----A-------EAHEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----C-------CTTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----c-------CCCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            5799999999999999999999999999999984321    0       2467899999999999999999999999999


Q ss_pred             cCCC-----------chhHHHHHHHHHHhCCcceeec-cC---CCCCCc----cCCccCCCCcchHHHHHHHHHHHHH--
Q 039623           82 SRGQ-----------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVD----RSQNVVEPAKSAYADKIKIRRAIEA--  140 (292)
Q Consensus        82 ~~~~-----------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~----~~~~~~~~~~~~~~~K~~~e~~~~~--  140 (292)
                      +...           +.++.+++++|++.+ ++++|+ |+   |+....    .++.+..|...|..+|..+|.+++.  
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  150 (267)
T 3ay3_A           72 GVSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYY  150 (267)
T ss_dssp             SCCSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            8743           567899999999988 889887 32   443211    1144444556666699999998864  


Q ss_pred             --cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCcc
Q 039623          141 --EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNV  218 (292)
Q Consensus       141 --~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~  218 (292)
                        .+++++++||+.+++..                    .++...+++++++|+|++++.+++++...+++|++.++. .
T Consensus       151 ~~~gi~~~~lrp~~v~~~~--------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~-~  209 (267)
T 3ay3_A          151 HKFDIETLNIRIGSCFPKP--------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN-T  209 (267)
T ss_dssp             HTTCCCEEEEEECBCSSSC--------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC-S
T ss_pred             HHcCCCEEEEeceeecCCC--------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc-c
Confidence              58999999999987421                    012345688999999999999998876555788887655 7


Q ss_pred             ccHHHHHHHHHHHhCCCcceeecCHHHHHHHHHh
Q 039623          219 YSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQD  252 (292)
Q Consensus       219 ~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (292)
                      .++.|+.+.  +.+|.++.   .+.+++.+.+..
T Consensus       210 ~~~~d~~~~--~~lg~~p~---~~~~~~~~~~~~  238 (267)
T 3ay3_A          210 ESWWDNDKS--AFLGWVPQ---DSSEIWREEIEQ  238 (267)
T ss_dssp             SCCBCCGGG--GGGCCCCC---CCGGGGHHHHHH
T ss_pred             ccccCHHHH--HHcCCCCC---CCHHHHHHHHHh
Confidence            788888887  77887654   467776666644

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.94  E-value=4e-27  Score=191.67  Aligned_cols=195  Identities=13%  Similarity=0.124  Sum_probs=144.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ||||||||||+||++++++|+++|++|++++|+     +++.   ..+...+++++.+|++|+++  +++.++|+|||+|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~---~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   70 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD-----PQKA---ADRLGATVATLVKEPLVLTE--ADLDSVDAVVDAL   70 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec-----cccc---ccccCCCceEEecccccccH--hhcccCCEEEECC
Confidence            579999999999999999999999999999998     4444   33345789999999999887  7889999999999


Q ss_pred             cCCC--------chhHHHHHHHHHHhCCcceeec-cCCCC---CCc----cC--CccCCCCcchHHHHHHHHHHH---HH
Q 039623           82 SRGQ--------IPEQAKIIAAVKEAGNVKRFLP-SEFGN---DVD----RS--QNVVEPAKSAYADKIKIRRAI---EA  140 (292)
Q Consensus        82 ~~~~--------~~~~~~l~~a~~~~~~~~~~i~-s~~g~---~~~----~~--~~~~~~~~~~~~~K~~~e~~~---~~  140 (292)
                      |...        +.++++++++|++.+  +++|+ |+.+.   ...    ..  ...+.|...|..+|...|.+.   +.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~  148 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMN  148 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhc
Confidence            9841        788999999999887  66665 44321   111    00  112222444555999988652   24


Q ss_pred             cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCC
Q 039623          141 EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       141 ~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      .+++++++||+.++++.......     .....+   .......++++++|+|++++.+++++...+++|++.+..
T Consensus       149 ~~i~~~ivrp~~v~g~~~~~~~~-----~~~~~~---~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~  216 (224)
T 3h2s_A          149 ANVNWIGISPSEAFPSGPATSYV-----AGKDTL---LVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDAD  216 (224)
T ss_dssp             TTSCEEEEEECSBCCCCCCCCEE-----EESSBC---CCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC
T ss_pred             CCCcEEEEcCccccCCCcccCce-----eccccc---ccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCc
Confidence            68999999999999762211110     011111   112345689999999999999999988889999998766

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.94  E-value=2.2e-27  Score=216.02  Aligned_cols=211  Identities=13%  Similarity=0.157  Sum_probs=150.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|||||||||||++|++.|+++|++|++++|+...     .           +.+.+|+.+.  +.+++.++|+|||+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~-----~-----------~~v~~d~~~~--~~~~l~~~D~Vih~  208 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK-----P-----------GKRFWDPLNP--ASDLLDGADVLVHL  208 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC-----T-----------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC-----c-----------cceeecccch--hHHhcCCCCEEEEC
Confidence            6899999999999999999999999999999998432     1           2367787653  45677899999999


Q ss_pred             CcCCC----------------chhHHHHHHH-HHHhCCcceeec-c---CCC-CCCccC--CccCCCCcchHHHHHHHHH
Q 039623           81 VSRGQ----------------IPEQAKIIAA-VKEAGNVKRFLP-S---EFG-NDVDRS--QNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        81 a~~~~----------------~~~~~~l~~a-~~~~~~~~~~i~-s---~~g-~~~~~~--~~~~~~~~~~~~~K~~~e~  136 (292)
                      |+...                +.++.+++++ +++.+ +++||+ |   .|| ......  +....+.+.|..+|...|+
T Consensus       209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~  287 (516)
T 3oh8_A          209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEH  287 (516)
T ss_dssp             CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHH
T ss_pred             CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHH
Confidence            99751                5679999999 55555 889987 3   466 211110  1222233344448887776


Q ss_pred             HHH---HcCccEEEEecceeccccc---cccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceE
Q 039623          137 AIE---AEGIQYTYVSCNCFAGYFL---PTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTL  210 (292)
Q Consensus       137 ~~~---~~~~~~~~ir~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  210 (292)
                      ++.   ..|++++++||+.++|...   +.+...    ...+....++++++.+++||++|+|++++.+++++.. +++|
T Consensus       288 ~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~----~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~  362 (516)
T 3oh8_A          288 ATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTL----FSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPI  362 (516)
T ss_dssp             TTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHT----TC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEE
T ss_pred             HHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHH----HHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcE
Confidence            543   5799999999999998642   222221    2233334678889999999999999999999988653 5689


Q ss_pred             EEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          211 YIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       211 ~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      |+++++ .+|++|+++.+.+.+|.+.
T Consensus       363 ni~~~~-~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          363 NAVAPN-PVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             EESCSC-CEEHHHHHHHTTC------
T ss_pred             EEECCC-CCCHHHHHHHHHHHhCCCC
Confidence            998765 9999999999999999765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=1.9e-26  Score=192.74  Aligned_cols=214  Identities=13%  Similarity=0.072  Sum_probs=164.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|+||||||+||+++++.|+++|++|++++|+....     .      ..+++++.+|++|.+++.++++++|+|||+
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-----~------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   71 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-----A------GPNEECVQCDLADANAVNAMVAGCDGIVHL   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC-----C------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc-----c------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence            36799999999999999999999999999999984322     1      457899999999999999999999999999


Q ss_pred             CcCCC-----------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc----CCccCCCCcchHHHHHHHHHHHH--
Q 039623           81 VSRGQ-----------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR----SQNVVEPAKSAYADKIKIRRAIE--  139 (292)
Q Consensus        81 a~~~~-----------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~----~~~~~~~~~~~~~~K~~~e~~~~--  139 (292)
                      ||...           +.++.+++++|++.+ ++++|+ |   .||.....    .+.+..|...|..+|+.+|.+++  
T Consensus        72 Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~  150 (267)
T 3rft_A           72 GGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMY  150 (267)
T ss_dssp             CSCCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            99754           778999999999998 889987 3   34422211    03444455556669999999886  


Q ss_pred             --HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCc
Q 039623          140 --AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGN  217 (292)
Q Consensus       140 --~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~  217 (292)
                        +.+++++++||+.+++..                    .++....++++++|+++++..+++.+...+.++++.+++ 
T Consensus       151 a~~~g~~~~~vr~~~v~~~~--------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~-  209 (267)
T 3rft_A          151 FDKFGQETALVRIGSCTPEP--------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN-  209 (267)
T ss_dssp             HHHHCCCEEEEEECBCSSSC--------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCC-
T ss_pred             HHHhCCeEEEEEeecccCCC--------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCC-
Confidence              468999999999988762                    223456678999999999999999877666788888665 


Q ss_pred             cccHHHHHHHHHHHhCCCcceeecCHHHHHHHHHh
Q 039623          218 VYSFNELVTLWENKIGKTLEKTYVAEEKLLKDIQD  252 (292)
Q Consensus       218 ~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (292)
                      ..++.++...  +.+|..+..   ..+.|.+.+..
T Consensus       210 ~~~~~~~~~~--~~~g~~p~~---~~~~~~~~l~~  239 (267)
T 3rft_A          210 DAGWWDNSHL--GFLGWKPKD---NAEAFRRHITE  239 (267)
T ss_dssp             TTCCBCCGGG--GGGCCCCCC---CGGGGHHHHHT
T ss_pred             CCCcccChhH--HHCCCCCCC---CHHHHHHHHHh
Confidence            6666666443  566764432   23555655543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=1e-25  Score=184.86  Aligned_cols=195  Identities=19%  Similarity=0.261  Sum_probs=144.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+||||||||+||+++++.|+++| ++|++++|+     +++.+   .+...+++++.+|++|++++.++++++|+|||
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~-----~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQ-----PAKIH---KPYPTNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESS-----GGGSC---SSCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcC-----hhhhc---ccccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            5689999999999999999999999 999999998     43332   22346899999999999999999999999999


Q ss_pred             cCcCCC-chhHHHHHHHHHHhCCcceeec-cCCCC---CCccC-CccCCCCcchHHHHHHHHHHHHHcCccEEEEeccee
Q 039623           80 TVSRGQ-IPEQAKIIAAVKEAGNVKRFLP-SEFGN---DVDRS-QNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCF  153 (292)
Q Consensus        80 ~a~~~~-~~~~~~l~~a~~~~~~~~~~i~-s~~g~---~~~~~-~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~  153 (292)
                      +++... ...+++++++|++.+ +++||+ |+.+.   ..... .........++..+...|+.++..+++++++||+.+
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i  173 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWL  173 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTT-CCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEE
T ss_pred             cCCCCchhHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcc
Confidence            999766 456889999999998 899987 44332   11110 000111234455677788888889999999999999


Q ss_pred             ccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc-CCCceEEEcCCC
Q 039623          154 AGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR-TLNKTLYIRPPG  216 (292)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~~~~~~  216 (292)
                      .+.......            ...........+++++|+|++++.++.++. ..++.|++.++.
T Consensus       174 ~~~~~~~~~------------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          174 TDEDIIDYE------------LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             ECCSCCCCE------------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             cCCCCcceE------------EeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            876322110            011111112357999999999999999876 568899998765

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.94  E-value=1.5e-26  Score=199.74  Aligned_cols=225  Identities=16%  Similarity=0.159  Sum_probs=153.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|||||||||||++++++|+++|++|++++|+...  ..+...+..+.  ..+++++.+|++|.+++.++++++|+|||
T Consensus         6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN--VKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC--HHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch--hHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            689999999999999999999999999999998321  11221111111  13588999999999999999999999999


Q ss_pred             cCcCCC--------------chhHHHHHHHHHHhCCcceeec-cCC----CCCCccC---CccC----------CCCcch
Q 039623           80 TVSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-SEF----GNDVDRS---QNVV----------EPAKSA  127 (292)
Q Consensus        80 ~a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s~~----g~~~~~~---~~~~----------~~~~~~  127 (292)
                      +|+...              +.++.+++++|++.+.++++|+ |+.    +......   +...          .+...|
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            998532              5678999999998764788887 432    2211100   1110          122245


Q ss_pred             HHHHHHHHHHHH----HcCccEEEEecceeccccccccccCCCC----CCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIE----AEGIQYTYVSCNCFAGYFLPTLAQIGAP----APPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~----~~~~~~~~ir~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..+|+++.    ..+++++++||+.++|+...........    ...+... .++.+ ....++|++|+|++++.+
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~  241 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYL  241 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHH
Confidence            559999998775    3589999999999988753211100000    0011111 11111 234599999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      ++++.. ++.|++. ++ .+|++|+++.+.+.++
T Consensus       242 ~~~~~~-~~~~~~~-~~-~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          242 FENPKA-EGRYICS-SH-DCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHCTTC-CEEEEEC-CE-EEEHHHHHHHHHHHCT
T ss_pred             hcCccc-CceEEEe-CC-CCCHHHHHHHHHHHCC
Confidence            987543 4466543 44 6899999999998764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.94  E-value=5.7e-26  Score=190.25  Aligned_cols=207  Identities=16%  Similarity=0.101  Sum_probs=156.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc--CCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ--VDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi~   79 (292)
                      |+|+||||||+||++++++|++ |++|++++|+...         .    .+   +.+|++|++++.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~---------~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~   63 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI---------Q----GG---YKLDLTDFPRLEDFIIKKRPDVIIN   63 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC---------T----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC---------C----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence            5899999999999999999994 8999999998421         0    12   88999999999999986  999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCc--cCCccCCCCcchHHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVD--RSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~--~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      +||...               +.++.+++++|++.+ + ++|+ |   .|+....  .++.+..|...|..+|..+|+++
T Consensus        64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  141 (273)
T 2ggs_A           64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFA  141 (273)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999754               567899999999987 6 6775 3   3433221  11334445556666999999999


Q ss_pred             HHcCccEEEEecceeccc--cccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCC
Q 039623          139 EAEGIQYTYVSCNCFAGY--FLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       139 ~~~~~~~~~ir~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      +.  ++++++||+.++|.  +...+....   ..+..+...++   .+++++++|+|++++.+++++.  +++|++.+ +
T Consensus       142 ~~--~~~~~iR~~~v~G~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-~  210 (273)
T 2ggs_A          142 LQ--DDSLIIRTSGIFRNKGFPIYVYKTL---KEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-E  210 (273)
T ss_dssp             CC--TTCEEEEECCCBSSSSHHHHHHHHH---HTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC-C
T ss_pred             hC--CCeEEEeccccccccHHHHHHHHHH---HcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC-C
Confidence            87  88999999998862  111111110   12344445443   7899999999999999998753  55888876 4


Q ss_pred             ccccHHHHHHHHHHHhCCCccee
Q 039623          217 NVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       217 ~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                       .+|++|+++.+.+.+|.+.++.
T Consensus       211 -~~s~~e~~~~~~~~~g~~~~~~  232 (273)
T 2ggs_A          211 -RISRFELALKIKEKFNLPGEVK  232 (273)
T ss_dssp             -CEEHHHHHHHHHHHTTCCSCEE
T ss_pred             -cccHHHHHHHHHHHhCCChhhc
Confidence             9999999999999999876654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=2.6e-25  Score=180.60  Aligned_cols=197  Identities=15%  Similarity=0.142  Sum_probs=145.6

Q ss_pred             Cce-EEEEccCCcchHHHHHHHH-hCCCCEEEEecCCCCCCCc-chhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            1 MAA-TLIIGGTGYIGKKILEASV-KAGHPTFALVRESTASDPV-KGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~-vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ||| |+||||||+||+++++.|+ +.|++|++++|+     ++ +.+.+.. ...++.++.+|++|++++.++++++|+|
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~v   77 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ-----LKTRIPPEII-DHERVTVIEGSFQNPGXLEQAVTNAEVV   77 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS-----HHHHSCHHHH-TSTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC-----ccccchhhcc-CCCceEEEECCCCCHHHHHHHHcCCCEE
Confidence            555 9999999999999999999 899999999998     55 4433211 3568999999999999999999999999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcceeec-cCCCCCCccC----CccCCCCc-chHHHHHHHHHHHHHcCccEEEEecc
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRS----QNVVEPAK-SAYADKIKIRRAIEAEGIQYTYVSCN  151 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~----~~~~~~~~-~~~~~K~~~e~~~~~~~~~~~~ir~~  151 (292)
                      ||++|...+. ++++++++++.+ ++++|+ |+.+......    ........ .|..+|..+|++++..+++++++||+
T Consensus        78 v~~ag~~n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg  155 (221)
T 3r6d_A           78 FVGAMESGSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLT  155 (221)
T ss_dssp             EESCCCCHHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEEC
T ss_pred             EEcCCCCChh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEech
Confidence            9999976666 999999999998 889887 5443322210    00000112 56669999999999999999999999


Q ss_pred             eeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh--cCCc-CCCceEEEcCCC
Q 039623          152 CFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI--DGPR-TLNKTLYIRPPG  216 (292)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l--~~~~-~~~~~~~~~~~~  216 (292)
                      ++++.......           ............+++.+|+|++++.++  .++. ..++.+.+.++.
T Consensus       156 ~v~~~~~~~~~-----------~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          156 WLYNDPEXTDY-----------ELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             EEECCTTCCCC-----------EEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             hhcCCCCCcce-----------eeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            99876211110           000111111224789999999999999  7764 457777777554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.94  E-value=7.6e-27  Score=201.65  Aligned_cols=225  Identities=17%  Similarity=0.190  Sum_probs=154.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |+|||||||||||++|+++|+++|++|++++|+....  .+...+..+ ...+++++.+|++|.+++.++++++|+|||+
T Consensus        10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A           10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQ--KKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCT--TTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchh--hhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            6899999999999999999999999999999974321  122212222 1357899999999999999999999999999


Q ss_pred             CcCCC--------------chhHHHHHHHHHHhCCcceeec-cCCC---------C--CCccCCc--------cCCCCc-
Q 039623           81 VSRGQ--------------IPEQAKIIAAVKEAGNVKRFLP-SEFG---------N--DVDRSQN--------VVEPAK-  125 (292)
Q Consensus        81 a~~~~--------------~~~~~~l~~a~~~~~~~~~~i~-s~~g---------~--~~~~~~~--------~~~~~~-  125 (292)
                      |+...              +.++.+++++|++.+.+++||+ |+.+         .  ...+ +.        +..|.. 
T Consensus        88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E-~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDE-KNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCT-TTTTCC-------CCCC
T ss_pred             CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccCh-hhccchhhccccCCccc
Confidence            98532              5678999999998743889987 4321         0  1111 11        111112 


Q ss_pred             chHHHHHHHHHHHHH----cCccEEEEecceeccccccccccCCCC----CCCCCceeecCC------CcceEEeeccch
Q 039623          126 SAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIGAP----APPREKVTIFGD------GNAGAVYNKEDD  191 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~~~~~i~v~D  191 (292)
                      .|..+|..+|+++..    .+++++++||+.++|+...........    ...++.. .++.      ++..++++|++|
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~D  245 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVED  245 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHH
Confidence            355599999987753    589999999999988754221100000    0011111 1111      112348999999


Q ss_pred             HHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          192 IATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       192 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      +|++++.+++++.. ++.|++. ++ .+|++|+++.+.+..+
T Consensus       246 va~a~~~~~~~~~~-~~~~~~~-~~-~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          246 VCRAHIFVAEKESA-SGRYICC-AA-NTSVPELAKFLSKRYP  284 (338)
T ss_dssp             HHHHHHHHHHCTTC-CEEEEEC-SE-EECHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHcCCCc-CCcEEEe-cC-CCCHHHHHHHHHHhCC
Confidence            99999999987543 4567664 34 7899999999998765

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.93  E-value=2.3e-26  Score=197.18  Aligned_cols=223  Identities=18%  Similarity=0.202  Sum_probs=151.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEec-CCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVR-ESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|||||||||||+++++.|+++|++|++++| ++..  .++...+..+.  ..+++++.+|++|++++.++++++|+||
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPER--KRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC------CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccc--hhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            68999999999999999999999999999998 5321  11222222111  1357889999999999999999999999


Q ss_pred             EcCcCCC--------------chhHHHHHHHHHHh-CCcceeec-cCC----CCCCcc-C--Ccc---------CCCCc-
Q 039623           79 STVSRGQ--------------IPEQAKIIAAVKEA-GNVKRFLP-SEF----GNDVDR-S--QNV---------VEPAK-  125 (292)
Q Consensus        79 ~~a~~~~--------------~~~~~~l~~a~~~~-~~~~~~i~-s~~----g~~~~~-~--~~~---------~~~~~-  125 (292)
                      |+|+...              +.++.+++++|.+. + +++||+ |+.    +..... .  +..         ..|.. 
T Consensus        80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~  158 (322)
T 2p4h_X           80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGW  158 (322)
T ss_dssp             ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred             EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccc
Confidence            9997532              56789999999987 6 889987 332    211110 0  110         01122 


Q ss_pred             chHHHHHHHHHHHHH----cCccEEEEecceecccccccccc----CCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQ----IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..+|+++.+    .+++++++||+.++|........    .......+... .++.  ..++++|++|+|++++
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~-~~~~--~~~~~i~v~Dva~a~~  235 (322)
T 2p4h_X          159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKE-QIGV--TRFHMVHVDDVARAHI  235 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGG-GCCE--EEEEEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCc-cCcC--CCcCEEEHHHHHHHHH
Confidence            355599999988753    58999999999998875321100    00000011111 1222  2348999999999999


Q ss_pred             HhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          198 NSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       198 ~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      .+++++.. .+.|+ ++ +..+|++|+++.+.+..+
T Consensus       236 ~~~~~~~~-~g~~~-~~-~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          236 YLLENSVP-GGRYN-CS-PFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHHSCCC-CEEEE-CC-CEEEEHHHHHHHHHHHCT
T ss_pred             HHhhCcCC-CCCEE-Ec-CCCCCHHHHHHHHHHhCC
Confidence            99977543 34566 44 458999999999988764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=1.9e-26  Score=186.40  Aligned_cols=183  Identities=16%  Similarity=0.151  Sum_probs=141.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+|+||||||+||++++++|+++|+  +|++++|++..            ...+++++.+|++|++++.+++  +|+|||
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~--~d~vi~   71 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS--IDTAFC   71 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC--CSEEEE
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh--hcEEEE
Confidence            5899999999999999999999998  99999998432            1357888999999988887777  999999


Q ss_pred             cCcCCC-------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCcc-
Q 039623           80 TVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQ-  144 (292)
Q Consensus        80 ~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~-  144 (292)
                      ++|...             +.++.+++++|++.+ ++++|+ |+.+....       +...|..+|..+|++++..+++ 
T Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~-------~~~~y~~sK~~~e~~~~~~~~~~  143 (215)
T 2a35_A           72 CLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK-------SSIFYNRVKGELEQALQEQGWPQ  143 (215)
T ss_dssp             CCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-------CSSHHHHHHHHHHHHHTTSCCSE
T ss_pred             CeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC-------CccHHHHHHHHHHHHHHHcCCCe
Confidence            999753             568899999999998 888887 55443221       2455666999999999999999 


Q ss_pred             EEEEecceecccccc-ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCC
Q 039623          145 YTYVSCNCFAGYFLP-TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPP  215 (292)
Q Consensus       145 ~~~ir~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~  215 (292)
                      ++++||+.++++... .+....    ...... ..++  .+++++++|+|++++.+++++.  +++|++.++
T Consensus       144 ~~~vrp~~v~g~~~~~~~~~~~----~~~~~~-~~~~--~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~  206 (215)
T 2a35_A          144 LTIARPSLLFGPREEFRLAEIL----AAPIAR-ILPG--KYHGIEACDLARALWRLALEEG--KGVRFVESD  206 (215)
T ss_dssp             EEEEECCSEESTTSCEEGGGGT----TCCCC-----C--HHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHH
T ss_pred             EEEEeCceeeCCCCcchHHHHH----HHhhhh-ccCC--CcCcEeHHHHHHHHHHHHhcCC--CCceEEcHH
Confidence            999999999987543 222211    111111 2222  6689999999999999998865  678888743

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=3.3e-24  Score=176.45  Aligned_cols=190  Identities=14%  Similarity=0.087  Sum_probs=138.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+|+||||||+||++++++|+++|+  +|++++|++...     +.   ....++.++.+|++|++++.++++++|+|||
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~-----~~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF-----DE---EAYKNVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC-----CS---GGGGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc-----cc---cccCCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            5899999999999999999999999  999999985432     11   1134688999999999999999999999999


Q ss_pred             cCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCc-cE
Q 039623           80 TVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGI-QY  145 (292)
Q Consensus        80 ~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~-~~  145 (292)
                      |||...            +.++.+++++|++.+ ++++|+ |+.+....       +...|..+|..+|++++..++ ++
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~-------~~~~Y~~sK~~~e~~~~~~~~~~~  162 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS-------SNFLYLQVKGEVEAKVEELKFDRY  162 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-------CSSHHHHHHHHHHHHHHTTCCSEE
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC-------CcchHHHHHHHHHHHHHhcCCCCe
Confidence            999753            567899999999988 889887 55443221       234566699999999999999 59


Q ss_pred             EEEecceeccccccc-cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEE
Q 039623          146 TYVSCNCFAGYFLPT-LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI  212 (292)
Q Consensus       146 ~~ir~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  212 (292)
                      +++||+.++++.... .................+    ...+++++|+|++++.++.++... +.+.+
T Consensus       163 ~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~~~~~~~~~-~~~~~  225 (242)
T 2bka_A          163 SVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWA----SGHSVPVVTVVRAMLNNVVRPRDK-QMELL  225 (242)
T ss_dssp             EEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGG----GGTEEEHHHHHHHHHHHHTSCCCS-SEEEE
T ss_pred             EEEcCceecCCCCCCcHHHHHHHHhhcccCcccc----CCcccCHHHHHHHHHHHHhCcccc-CeeEe
Confidence            999999998874321 100000000000000011    124899999999999999887543 34444

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.88  E-value=1.9e-22  Score=169.75  Aligned_cols=218  Identities=18%  Similarity=0.192  Sum_probs=147.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+|+||||+|+||++++++|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++       ++
T Consensus         6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR-----TEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999998     555544443335679999999999999888876       68


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |+|||+||...                   +.+    ++.+++.+++.+ ..++|+ |+......     ..+...|..+
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~Y~~s  154 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLS-----FAGFSAYSAT  154 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC-----CTTCHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCC-----CCCchHHHHH
Confidence            99999999643                   333    777777778777 788887 44332222     1234455559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccC---CCCCCCC--CceeecCCCcceEEeeccchHHHHHHH
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQI---GAPAPPR--EKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..++.+.+.       .|+++++++||.+.+.........   .......  ..............+.+++|+|++++.
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~  234 (281)
T 3m1a_A          155 KAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRL  234 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHH
Confidence            9999988763       589999999999976643221100   0000000  000011112234567899999999999


Q ss_pred             hhcCCcCCCceEEEcCCCccccHHHHHHHHHHHh
Q 039623          199 SIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKI  232 (292)
Q Consensus       199 ~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~  232 (292)
                      +++++.. +..|++.++. .....+....+.+.+
T Consensus       235 ~~~~~~~-~~~~~l~s~~-~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          235 ALDTEKT-PLRLALGGDA-VDFLTGHLDSVRAEL  266 (281)
T ss_dssp             HHHSSSC-CSEEEESHHH-HHHHHHHHHHHHHHH
T ss_pred             HHhCCCC-CeEEecCchH-HHHHHHHHHHHHHHH
Confidence            9998754 5577776433 555666666665543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.88  E-value=5.1e-23  Score=170.48  Aligned_cols=200  Identities=12%  Similarity=0.055  Sum_probs=135.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc----cCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK----QVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~----~~d~   76 (292)
                      ||+||||||+|+||+++++.|+++|++|++++|+..     +.+       .   .+.+|++|.+++.++++    ++|+
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~-------~---~~~~D~~~~~~~~~~~~~~~~~~d~   65 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQA-----DIE-------A---DLSTPGGRETAVAAVLDRCGGVLDG   65 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS-----SEE-------C---CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh-----Hcc-------c---cccCCcccHHHHHHHHHHcCCCccE
Confidence            789999999999999999999999999999999842     221       1   16789999999988886    7999


Q ss_pred             EEEcCcCCC------------chhHHHHHHHHHHh----CCcceeec-cC---CCCCCccC-----------C-------
Q 039623           77 VISTVSRGQ------------IPEQAKIIAAVKEA----GNVKRFLP-SE---FGNDVDRS-----------Q-------  118 (292)
Q Consensus        77 vi~~a~~~~------------~~~~~~l~~a~~~~----~~~~~~i~-s~---~g~~~~~~-----------~-------  118 (292)
                      |||+||...            +.++.++++++.+.    + .+++|+ |+   ++......           +       
T Consensus        66 vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (255)
T 2dkn_A           66 LVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE  144 (255)
T ss_dssp             EEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHH
T ss_pred             EEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhhhcc
Confidence            999999643            56777888877654    4 577776 43   22210000           0       


Q ss_pred             ccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccch
Q 039623          119 NVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDD  191 (292)
Q Consensus       119 ~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (292)
                      ....+...|..+|..+|.+++.       .+++++++||+.+.+..........   .......... + ...++++++|
T Consensus       145 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~d  219 (255)
T 2dkn_A          145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP---RYGESTRRFV-A-PLGRGSEPRE  219 (255)
T ss_dssp             HHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT---TTHHHHHSCC-C-TTSSCBCHHH
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch---hhHHHHHHHH-H-HhcCCCCHHH
Confidence            0012333454599999988764       4899999999999887543321110   1111111111 1 3347899999


Q ss_pred             HHHHHHHhhcCC--cCCCceEEEcCCCccccHH
Q 039623          192 IATYTINSIDGP--RTLNKTLYIRPPGNVYSFN  222 (292)
Q Consensus       192 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~  222 (292)
                      +|++++.++.++  ...|+.|++.|.. .++++
T Consensus       220 va~~~~~l~~~~~~~~~G~~~~v~gg~-~~~~~  251 (255)
T 2dkn_A          220 VAEAIAFLLGPQASFIHGSVLFVDGGM-DALMR  251 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTH-HHHHC
T ss_pred             HHHHHHHHhCCCcccceeeEEEecCCe-Eeeee
Confidence            999999999865  2346778876543 55543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.87  E-value=7.4e-22  Score=165.72  Aligned_cols=214  Identities=13%  Similarity=0.091  Sum_probs=146.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhhc-CCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFKN-LGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~-~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.. .++.++.+|++|++++.++++       
T Consensus        17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----hhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999997     44432222 2211 268999999999999988876       


Q ss_pred             cCCEEEEcCcCCC---------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 QVDVVISTVSRGQ---------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 ~~d~vi~~a~~~~---------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                      ++|+|||+||...                     +.++.++++++.+.    + .+++|+ |+.......    ..+...
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----~~~~~~  166 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG----EGVSHV  166 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC----TTSCHH
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCC----CCCCcc
Confidence            6999999998531                     44566666666553    4 567776 443222111    012334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee--ecCCCcceEEeeccchHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT--IFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      |..+|..++.+++.       .|++++++||+.+.+.........     ......  ..........+++++|+|++++
T Consensus       167 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  241 (278)
T 2bgk_A          167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-----DSSRVEELAHQAANLKGTLLRAEDVADAVA  241 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-----CHHHHHHHHHHTCSSCSCCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc-----chhHHHHhhhcccccccccCCHHHHHHHHH
Confidence            55599999988764       489999999999987753321100     000000  0001112345789999999999


Q ss_pred             HhhcCCc--CCCceEEEcCCCccccHHHHHHHHHHH
Q 039623          198 NSIDGPR--TLNKTLYIRPPGNVYSFNELVTLWENK  231 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~~~~~~  231 (292)
                      .++.++.  ..|+.+++.|.. .++++|+++.+.+.
T Consensus       242 ~l~~~~~~~~~G~~~~v~gg~-~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          242 YLAGDESKYVSGLNLVIDGGY-TRTNPAFPTALKHG  276 (278)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG-GGCCTHHHHHSCSC
T ss_pred             HHcCcccccCCCCEEEECCcc-cccCCccchhhhhh
Confidence            9997542  346788887655 88999999887654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.85  E-value=4.9e-21  Score=158.65  Aligned_cols=200  Identities=14%  Similarity=0.104  Sum_probs=135.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998     4443322 2221  3468899999999999988876      


Q ss_pred             -cCCEEEEcCcCCC------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       ++|+|||+||...                  +.++.++++++    ++.+ .+++|+ |+......     ..+...|.
T Consensus        87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~Y~  160 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK-----NINMTSYA  160 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC-----CTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCC-----CCCCcccH
Confidence             7999999998642                  34555555555    4556 678876 44322211     12334555


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+++.       .+++++++||+.+.+.........       ........+.....+++++|+|++++.++.
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  233 (255)
T 1fmc_A          161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP-------EIEQKMLQHTPIRRLGQPQDIANAALFLCS  233 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH-------HHHHHHHHTCSSCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccCh-------HHHHHHHhcCCcccCCCHHHHHHHHHHHhC
Confidence            599999888764       379999999999987643221000       000000001112346789999999999997


Q ss_pred             CCc--CCCceEEEcCCCcccc
Q 039623          202 GPR--TLNKTLYIRPPGNVYS  220 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~~~~~t  220 (292)
                      .+.  ..|+.|++.|.. ..|
T Consensus       234 ~~~~~~~G~~~~v~gg~-~~s  253 (255)
T 1fmc_A          234 PAASWVSGQILTVSGGG-VQE  253 (255)
T ss_dssp             GGGTTCCSCEEEESTTS-CCC
T ss_pred             CccccCCCcEEEECCce-ecc
Confidence            643  246788887644 554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.85  E-value=2.2e-20  Score=155.18  Aligned_cols=205  Identities=13%  Similarity=0.130  Sum_probs=138.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |++|||||+|+||+++++.|+++|++|++++|+     .++.+.+.......+.++.+|++|++++.++++       ++
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            9 KSALITGSARGIGRAFAEAYVREGATVAIADID-----IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998     555544443345678999999999999888876       79


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||||...                   +.++.++++++.+    .+.-.++|. |+.......     .....|..+
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  158 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----ALVAIYCAT  158 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----CCChHHHHH
Confidence            99999999743                   4455566665543    221246665 443222221     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceecccccccccc---CCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ---IGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      |..++.+.+.       .++++..++||.+.+........   ........+......+......+.+++|+|++++.++
T Consensus       159 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~  238 (259)
T 4e6p_A          159 KAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLA  238 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence            9999988774       48999999999998764322100   0000011111222222334457889999999999999


Q ss_pred             cCCc--CCCceEEEcCCC
Q 039623          201 DGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~~  216 (292)
                      ....  ..|+.+++.|..
T Consensus       239 s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          239 SAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CCccCCCCCCEEEECcCh
Confidence            7543  247788887543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=1.2e-20  Score=158.48  Aligned_cols=217  Identities=11%  Similarity=0.089  Sum_probs=131.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh---h--cCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF---K--NLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~--~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+. .+   .  ..++.++.+|++|++++.++++   
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            479999999999999999999999999999998     55443322 22   1  2358899999999999888886   


Q ss_pred             ----cCCEEEEcCcCCC-----------------------chhHHHHHHHHHH----hCCcceeec-cCCCC-CCccCCc
Q 039623           73 ----QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGN-DVDRSQN  119 (292)
Q Consensus        73 ----~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~-~~~~~~~  119 (292)
                          ++|++||+||...                       +.++..+++++.+    .+  .++|+ |+... ....   
T Consensus        82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~---  156 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHAT---  156 (278)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCC---
T ss_pred             HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCC---
Confidence                7999999998632                       2334445555443    34  56665 44332 2221   


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc--eeecCCCcceEEeeccc
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK--VTIFGDGNAGAVYNKED  190 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~  190 (292)
                        ++...|..+|..++.+.+.       .|+++++++||.+.+.......... .......  ............+.+++
T Consensus       157 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~  233 (278)
T 1spx_A          157 --PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE-ETSKKFYSTMATMKECVPAGVMGQPQ  233 (278)
T ss_dssp             --TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHHHCTTSSCBCHH
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc-hhhhhhhHHHHHHHhcCCCcCCCCHH
Confidence              1233455599999888764       5899999999999876432210000 0000000  00000000112468999


Q ss_pred             hHHHHHHHhhcCCc---CCCceEEEcCCCccccHHHHHHHHHHHh
Q 039623          191 DIATYTINSIDGPR---TLNKTLYIRPPGNVYSFNELVTLWENKI  232 (292)
Q Consensus       191 D~a~~~~~~l~~~~---~~~~~~~~~~~~~~~t~~e~~~~~~~~~  232 (292)
                      |+|++++.++..+.   ..|+.+++.|.. .+++.|+++.+.+.+
T Consensus       234 dvA~~v~~l~s~~~~~~~tG~~~~vdgG~-~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          234 DIAEVIAFLADRKTSSYIIGHQLVVDGGS-SLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTG-GGC------------
T ss_pred             HHHHHHHHHcCccccCcccCcEEEECCCc-ccccCcccccHHHHh
Confidence            99999999997643   347778887654 899999999988753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.84  E-value=2e-19  Score=149.51  Aligned_cols=190  Identities=13%  Similarity=0.104  Sum_probs=134.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+.......+.++.+|++|++++.++++       ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998     555433322223358899999999999988886       79


Q ss_pred             CEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.    .++.+++.+++.+ ..++|+ |+.......     .+...|..+
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~s  156 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGT-----VACHGYTAT  156 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCC-----CCchhHHHH
Confidence            99999999643                   22    3356667777776 678876 443222111     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|++++++|||.+.+.... . ..       ....    ......+.+++|+|++++.++..+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~-------~~~~----~~~~~~~~~~~dvA~~v~~l~s~~  223 (260)
T 1nff_A          157 KFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VP-------EDIF----QTALGRAAEPVEVSNLVVYLASDE  223 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SC-------TTCS----CCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-ch-------hhHH----hCccCCCCCHHHHHHHHHHHhCcc
Confidence            9999888764       5899999999999877532 1 00       0000    011224678999999999999764


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+++.|.
T Consensus       224 ~~~~~G~~~~v~gG  237 (260)
T 1nff_A          224 SSYSTGAEFVVDGG  237 (260)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             ccCCcCCEEEECCC
Confidence            3  23677888754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.84  E-value=7e-20  Score=151.26  Aligned_cols=197  Identities=11%  Similarity=0.022  Sum_probs=133.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+|+||++++++|+++|++|++++|+     .++.+.+.. +   ...++.++.+|++|++++.++++     
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLS-----AETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ   77 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            679999999999999999999999999999998     444432221 1   13468999999999999988876     


Q ss_pred             --cCCEEEEcCcCCC----------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCC
Q 039623           73 --QVDVVISTVSRGQ----------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 --~~d~vi~~a~~~~----------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                        ++|+|||+||...                      +.    .++.+++.+++.+ .+++|+ |+.......     .+
T Consensus        78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~  151 (250)
T 2cfc_A           78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAF-----PG  151 (250)
T ss_dssp             HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TT
T ss_pred             hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCC-----CC
Confidence              7999999998531                      22    2345556666666 688876 443222111     12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+.+.       .+++++++||+.+.+.........      ...............+.+++|+|+++
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~  225 (250)
T 2cfc_A          152 RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ------PELRDQVLARIPQKEIGTAAQVADAV  225 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS------HHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC------HHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            34455599999888764       389999999999987754321000      00000000011123467999999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++..+.  ..|+.+++.|.
T Consensus       226 ~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          226 MFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             HHHHSTTCTTCCSCEEEESTT
T ss_pred             HHHcCchhhcccCCEEEECCc
Confidence            99998653  23677777643

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.83  E-value=1.6e-19  Score=150.47  Aligned_cols=196  Identities=13%  Similarity=0.112  Sum_probs=124.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHH-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAI-------   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~-------   71 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|.+++.+++       
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN-----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     4443322 2222  346889999999999888877       


Q ss_pred             -ccCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           72 -KQVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        72 -~~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       .++|+|||+||...                   +.++.++++++    ++.+ .+++|+ |+.......     .+...
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~  163 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSA-----SVGSI  163 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC---------------CCH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCC-----CCCch
Confidence             46899999999643                   34555666666    5566 678876 443322211     12345


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .+++++++||+.+.+..........   .    ............+++++|+|++++.+
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~dva~~~~~l  236 (266)
T 1xq1_A          164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---F----KKVVISRKPLGRFGEPEEVSSLVAFL  236 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHH---H----HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            55599999888764       4899999999999877543221100   0    00000111123578999999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +..+.  ..|+.+++.|.
T Consensus       237 ~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          237 CMPAASYITGQTICVDGG  254 (266)
T ss_dssp             TSGGGTTCCSCEEECCCC
T ss_pred             cCccccCccCcEEEEcCC
Confidence            97542  24667777643

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.83  E-value=3.2e-20  Score=154.58  Aligned_cols=204  Identities=10%  Similarity=0.098  Sum_probs=133.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh---cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK---NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~---~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.   ..++.++.+|++|++++.++++     
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ-----VDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            569999999999999999999999999999998     4444322 2221   4568899999999999888876     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHH----HHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAK----IIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~----l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++||+||...                   +.++..    ++..+++.+ ..++|+ |+.......     .+...
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  156 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPL-----WYEPI  156 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC-----CCcch
Confidence              7999999999642                   233334    444445566 678876 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCC--CCc-eeecCCC-cceEEeeccchHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPP--REK-VTIFGDG-NAGAVYNKEDDIATY  195 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~i~v~D~a~~  195 (292)
                      |..+|..++.+.+.       .|+++++++||.+.++..............  ... ...+... .....+.+++|+|++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~  236 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF  236 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            55599999888764       589999999999987643221100000000  000 0000000 112357899999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~~  216 (292)
                      ++.++..+.  ..|+.+++.|..
T Consensus       237 ~~~l~s~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          237 FVFLCSERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             HHHHTSTTCTTCCSCEEEESTTC
T ss_pred             HHHHcCccccCCCCcEEEECCCc
Confidence            999997643  247788887543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.83  E-value=2.8e-19  Score=148.55  Aligned_cols=188  Identities=13%  Similarity=0.124  Sum_probs=132.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++||||||+|+||+++++.|+++|++|++++|+....           ....+.++.+|++|++++.++++       ++
T Consensus        29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-----------ADPDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-----------SSTTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            5699999999999999999999999999999984322           12368899999999999888876       79


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++    ++.+ ..++|. |+......   .+..+...|..+
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~---~~~~~~~~Y~~s  173 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQP---MVGMPSALASLT  173 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSC---BTTCCCHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccC---CCCCccHHHHHH
Confidence            99999999753                   44555555554    5666 677776 33222111   111223344459


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||.+.+...+....           ...........+.+++|+|++++.+.+..
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----------~~~~~~~p~~r~~~~~dva~av~~L~~~~  242 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH-----------STLAGLHPVGRMGEIRDVVDAVLYLEHAG  242 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH-----------HHHHTTSTTSSCBCHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH-----------HHHhccCCCCCCcCHHHHHHHHHHhcccC
Confidence            9999988774       37999999999998764332110           01111122345678999999999996555


Q ss_pred             cCCCceEEEcCC
Q 039623          204 RTLNKTLYIRPP  215 (292)
Q Consensus       204 ~~~~~~~~~~~~  215 (292)
                      ...|+.+++.|.
T Consensus       243 ~itG~~i~vdGG  254 (260)
T 3un1_A          243 FITGEILHVDGG  254 (260)
T ss_dssp             TCCSCEEEESTT
T ss_pred             CCCCcEEEECCC
Confidence            456788888754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.83  E-value=6.2e-20  Score=151.02  Aligned_cols=197  Identities=14%  Similarity=0.105  Sum_probs=132.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |+|+||||+|+||++++++|+++|++|++++|+     +++.+.+... ..+++++.+|++|.+++.++++   ++|+||
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAKE-CPGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHh-ccCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            579999999999999999999999999999998     4444322221 2478889999999999999987   489999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      |+||...                   +.++.++++++.+.    +..+++|+ |+.......     .+...|..+|..+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~  156 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----PNLITYSSTKGAM  156 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----TTBHHHHHHHHHH
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----CCcchhHHHHHHH
Confidence            9999542                   44555556655443    31367776 443222111     1234455599999


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--C
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--T  205 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~  205 (292)
                      +.+++.       .+++++++||+.+.+.........      ......+..+...+++++++|+|++++.++.++.  .
T Consensus       157 ~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (244)
T 1cyd_A          157 TMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD------PEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAST  230 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC------HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC------HHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcc
Confidence            988864       479999999999987643211000      0000000111123578999999999999997653  2


Q ss_pred             CCceEEEcCC
Q 039623          206 LNKTLYIRPP  215 (292)
Q Consensus       206 ~~~~~~~~~~  215 (292)
                      .|+.+++.|.
T Consensus       231 ~G~~~~v~gG  240 (244)
T 1cyd_A          231 SGGGILVDAG  240 (244)
T ss_dssp             CSSEEEESTT
T ss_pred             cCCEEEECCC
Confidence            4667777643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.83  E-value=1.8e-20  Score=159.24  Aligned_cols=213  Identities=10%  Similarity=0.069  Sum_probs=140.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh---cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK---NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~---~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.   ..++.++.+|++|.+++.++++     
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK-----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     4443222 2221   4578999999999999888876     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        .+|+|||+||...                   +.++..+++++.+    .....++|+ |+ ++...      ..+..
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~------~~~~~  175 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG------SGFVV  175 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC------CTTCH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC------CCCcc
Confidence              4699999999532                   3445555555543    221467776 43 22111      12234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceecccc-ccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYF-LPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      .|..+|..++.+.+.       .|++++++|||.+.+.. ......       .... ...........+.+++|+|+++
T Consensus       176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~dva~~~  248 (302)
T 1w6u_A          176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-------TGTFEKEMIGRIPCGRLGTVEELANLA  248 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-------TSHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc-------chhhHHHHHhcCCcCCCCCHHHHHHHH
Confidence            555599999988764       58999999999997652 211100       0000 0000111123467899999999


Q ss_pred             HHhhcCCcC--CCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          197 INSIDGPRT--LNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       197 ~~~l~~~~~--~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      +.++.....  .|+.+++.|.. .++++++++.+.+..|
T Consensus       249 ~~l~~~~~~~~~G~~~~v~gg~-~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          249 AFLCSDYASWINGAVIKFDGGE-EVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTH-HHHHHSTTGGGGGCCH
T ss_pred             HHHcCCcccccCCCEEEECCCe-eeccCCccccchhhcc
Confidence            999975432  46778887544 7788888776665443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.83  E-value=5.2e-20  Score=152.11  Aligned_cols=196  Identities=14%  Similarity=0.109  Sum_probs=132.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+.. +. ..++.++.+|++|++++.++++       
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999998     444332222 21 1478999999999999888776       


Q ss_pred             cCCEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCc-ceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNV-KRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~-~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++|+|||+||...                   +.    .++.+++.+++.+ . +++|+ |+.......     .+...|
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~-----~~~~~Y  155 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGD-----PSLGAY  155 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCC-----TTCHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCC-----CCCccc
Confidence            4899999999643                   22    3455566666666 5 67776 443222111     123455


Q ss_pred             HHHHHHHHHHHH---------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          128 YADKIKIRRAIE---------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       128 ~~~K~~~e~~~~---------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      ..+|..++.+.+         ..+++++++||+++.+..........       .............+++++|+|++++.
T Consensus       156 ~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~  228 (251)
T 1zk4_A          156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-------EAMSQRTKTPMGHIGEPNDIAYICVY  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-------HHHTSTTTCTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchh-------hhHHHhhcCCCCCCcCHHHHHHHHHH
Confidence            559999888765         24789999999999876433211000       00000011112347899999999999


Q ss_pred             hhcCCc--CCCceEEEcCC
Q 039623          199 SIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++.  ..|+.+++.|.
T Consensus       229 l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          229 LASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HcCcccccccCcEEEECCC
Confidence            997643  24677777653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.83  E-value=2.2e-20  Score=157.05  Aligned_cols=218  Identities=11%  Similarity=0.149  Sum_probs=146.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhcC-----CcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKNL-----GVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~-----~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.. +.+...     .+.++.+|++|++++.++++   
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A           12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN-----PDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     4443322 222211     57899999999998888775   


Q ss_pred             ----cCCEEEEcCcCCC--------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCC
Q 039623           73 ----QVDVVISTVSRGQ--------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ----~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                          ++|++|||||...                    +.++..+++++.+    .+ -.++|+ |+.......     .+
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~  160 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTH-----RW  160 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCC-----TT
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCCC-----CC
Confidence                5899999999621                    3445555555543    33 347776 442211111     12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+.+.       .++++..++||.+.+.........      ......+........+.+++|+|+++
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~r~~~~~dva~~~  234 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES------AELSSDYAMCTPLPRQGEVEDVANMA  234 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC------HHHHHHHHHHCSSSSCBCHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC------HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            34555599999988874       468999999999987654322110      00000000111123456899999999


Q ss_pred             HHhhcCCcC--CCceEEEcCCCcccc-HHHHHHHHHHHhCCCcc
Q 039623          197 INSIDGPRT--LNKTLYIRPPGNVYS-FNELVTLWENKIGKTLE  237 (292)
Q Consensus       197 ~~~l~~~~~--~~~~~~~~~~~~~~t-~~e~~~~~~~~~~~~~~  237 (292)
                      +.++.+...  .|+.+++.|.. .++ ..++++.+.+.++.+..
T Consensus       235 ~~l~s~~~~~itG~~~~vdgG~-~~~~~~~~~~~~~~~~~~~~~  277 (281)
T 3svt_A          235 MFLLSDAASFVTGQVINVDGGQ-MLRRGPDFSAMLEPVFGRDAL  277 (281)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG-GGSCCCCCHHHHHHHHCTTGG
T ss_pred             HHHhCcccCCCCCCEEEeCCCh-hcccCCcchhccccccCCccc
Confidence            999976432  47888887655 555 77889999888887643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.83  E-value=4e-20  Score=147.84  Aligned_cols=168  Identities=17%  Similarity=0.140  Sum_probs=122.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc---CCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ---VDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~---~d~vi   78 (292)
                      |+|+||||+|+||+++++.|+ +|++|++++|+.     +              .+.+|++|++++.+++++   +|+||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~-----~--------------~~~~D~~~~~~~~~~~~~~~~~d~vi   63 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHS-----G--------------DVTVDITNIDSIKKMYEQVGKVDAIV   63 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS-----S--------------SEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc-----c--------------ceeeecCCHHHHHHHHHHhCCCCEEE
Confidence            689999999999999999999 999999999982     1              468999999999988875   89999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      |+||...                   +.++.++++++.+.- .-.++++ |+......     ..+...|..+|..+|.+
T Consensus        64 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           64 SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-----IVQGASAAMANGAVTAF  138 (202)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-----CTTCHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-----CCccHHHHHHHHHHHHH
Confidence            9999542                   456667788776651 0146665 43321111     12234455599999998


Q ss_pred             HHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEE
Q 039623          138 IEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLY  211 (292)
Q Consensus       138 ~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  211 (292)
                      ++.      .+++++++||+.+.+......                 +....+++++++|+|++++.++.+ ...|+.|+
T Consensus       139 ~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~-----------------~~~~~~~~~~~~dva~~~~~~~~~-~~~G~~~~  200 (202)
T 3d7l_A          139 AKSAAIEMPRGIRINTVSPNVLEESWDKLE-----------------PFFEGFLPVPAAKVARAFEKSVFG-AQTGESYQ  200 (202)
T ss_dssp             HHHHTTSCSTTCEEEEEEECCBGGGHHHHG-----------------GGSTTCCCBCHHHHHHHHHHHHHS-CCCSCEEE
T ss_pred             HHHHHHHccCCeEEEEEecCccCCchhhhh-----------------hhccccCCCCHHHHHHHHHHhhhc-cccCceEe
Confidence            875      378999999999987642110                 011234678999999999998854 33466776


Q ss_pred             E
Q 039623          212 I  212 (292)
Q Consensus       212 ~  212 (292)
                      +
T Consensus       201 v  201 (202)
T 3d7l_A          201 V  201 (202)
T ss_dssp             E
T ss_pred             c
Confidence            5

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.83  E-value=2e-19  Score=148.00  Aligned_cols=197  Identities=14%  Similarity=0.095  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+... ..+++++.+|++|++++.++++   ++|+||
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVRE-CPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHH-cCCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            479999999999999999999999999999998     5444332221 2367888999999999999986   589999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      |+||...                   +.++..+++++.+    .+...++|+ |+......     ..+...|..+|..+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a~  156 (244)
T 3d3w_A           82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----VTNHSVYCSTKGAL  156 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----CTTBHHHHHHHHHH
T ss_pred             ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----CCCCchHHHHHHHH
Confidence            9999643                   3445555555543    331366776 44322111     12234455599999


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--C
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--T  205 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~  205 (292)
                      +.+++.       .++++++++|+.+.+.........      ......+........+++++|+|++++.++.++.  .
T Consensus       157 ~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (244)
T 3d3w_A          157 DMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD------PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMT  230 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS------TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC------hHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence            988764       479999999999987643221100      0000001111123467899999999999997642  2


Q ss_pred             CCceEEEcCC
Q 039623          206 LNKTLYIRPP  215 (292)
Q Consensus       206 ~~~~~~~~~~  215 (292)
                      .|+.|++.|.
T Consensus       231 ~G~~~~v~gG  240 (244)
T 3d3w_A          231 TGSTLPVEGG  240 (244)
T ss_dssp             CSCEEEESTT
T ss_pred             CCCEEEECCC
Confidence            4677887643

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.82  E-value=8.1e-20  Score=151.23  Aligned_cols=198  Identities=15%  Similarity=0.126  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCHHHHHHHH------ccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDHESLIKAI------KQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~~~~~~~~------~~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+......++ .++.+|++|.+++.+++      .++
T Consensus        12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A           12 ACAAVTGAGSGIGLEICRAFAASGARLILIDRE-----AAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            479999999999999999999999999999998     554433322223456 88999999999988876      368


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |+|||+||...                   +.+    ++.+++.+++.+ .+++|+ |+.......   +..+...|..+
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~~~Y~~s  162 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVN---RPQFASSYMAS  162 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---SSSCBHHHHHH
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCC---CCCcchHHHHH
Confidence            99999999643                   223    445555666666 688887 443222111   11122455559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .+++++++||+.+.+.........      ......+........+.+++|+|++++.++.++
T Consensus       163 K~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (254)
T 2wsb_A          163 KGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER------PELFETWLDMTPMGRCGEPSEIAAAALFLASPA  236 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC------HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            9999888764       389999999999987643221100      000000000011234689999999999999754


Q ss_pred             c--CCCceEEEcC
Q 039623          204 R--TLNKTLYIRP  214 (292)
Q Consensus       204 ~--~~~~~~~~~~  214 (292)
                      .  ..|+.+++.|
T Consensus       237 ~~~~~G~~~~v~g  249 (254)
T 2wsb_A          237 ASYVTGAILAVDG  249 (254)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             cccccCCEEEECC
Confidence            2  3467777764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.82  E-value=4.8e-19  Score=146.66  Aligned_cols=195  Identities=14%  Similarity=0.061  Sum_probs=134.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|++++.++++       ++
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     554433322224468899999999999888876       79


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                       +..++.+++.+++.+ ..++|+ |+.......     .+...|..+
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  154 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGL-----ALTSSYGAS  154 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC-----CCchhHHHH
Confidence            99999999643                       223456777777777 688886 443222111     123445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEee-ccchHHHHHHHhhcC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYN-KEDDIATYTINSIDG  202 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~~~~~~l~~  202 (292)
                      |..++.+.+.       .++++++++||++.+.........    ... ..   ........+. +++|+|++++.++.+
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~-~~---~~~~p~~~~~~~~~dvA~~v~~l~s~  226 (254)
T 1hdc_A          155 KWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR----QGE-GN---YPNTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC----CST-TS---CTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh----HHH-HH---HhcCCCCCCCCCHHHHHHHHHHHhCc
Confidence            9999888764       479999999999987643321110    000 00   0000112356 899999999999976


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      +.  ..|+.+.+.|.
T Consensus       227 ~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          227 TSSYVTGAELAVDGG  241 (254)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCCCCCEEEECCC
Confidence            42  34677777754

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.82  E-value=1.2e-19  Score=149.94  Aligned_cols=195  Identities=14%  Similarity=0.090  Sum_probs=131.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++   ++|++|
T Consensus        15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSN-----EEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            579999999999999999999999999999998     666555544445689999999999999999887   689999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      |+||...                   +.++..+++++    ++.+ ..++|+ |+.......     .+...|..+|..+
T Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~  163 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGN-----PGQANYCASKAGL  163 (249)
T ss_dssp             ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CC-----SCSHHHHHHHHHH
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCC-----CCCchhHHHHHHH
Confidence            9999643                   33444454444    4455 567776 443222221     1233455599998


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--C
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--T  205 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~  205 (292)
                      +.+.+.       .++++..++||.+.+........        ..............+.+++|+|++++.++.++.  .
T Consensus       164 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  235 (249)
T 3f9i_A          164 IGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE--------KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI  235 (249)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBC------CCH--------HHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence            887763       47899999999987654322110        000111111223457889999999999998653  2


Q ss_pred             CCceEEEcCC
Q 039623          206 LNKTLYIRPP  215 (292)
Q Consensus       206 ~~~~~~~~~~  215 (292)
                      .|+.+++.|.
T Consensus       236 tG~~~~vdgG  245 (249)
T 3f9i_A          236 TGQTLHVNGG  245 (249)
T ss_dssp             CSCEEEESTT
T ss_pred             cCcEEEECCC
Confidence            4778888653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.82  E-value=5.9e-20  Score=151.22  Aligned_cols=196  Identities=14%  Similarity=0.133  Sum_probs=132.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchhhH-hhhh--cCCcEE-EECCCCCHHHHHHHHc---
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGKLI-EIFK--NLGVNV-LYGDLQDHESLIKAIK---   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~~--~~~v~~-v~~D~~d~~~~~~~~~---   72 (292)
                      ||+|+||||+|+||++++++|+++|++|+++ +|+     +++.+.+ +.+.  ..++.. +.+|++|.+++.++++   
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQN-----REKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAA   75 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSC-----HHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHH
Confidence            7899999999999999999999999999998 776     4443322 2222  235666 8999999998888764   


Q ss_pred             ----cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 ----QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ----~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                          ++|+|||+||...                   +.+    ++.+++.+++.+ .+++|+ |+.......     .+.
T Consensus        76 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~  149 (245)
T 2ph3_A           76 EVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGN-----PGQ  149 (245)
T ss_dssp             HHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----SSB
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCC-----CCC
Confidence                7999999999642                   223    666677777777 788887 443211111     123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .+++++++||+.+.+.........        ....+........+++++|+|++++
T Consensus       150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~  221 (245)
T 2ph3_A          150 ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQE--------VKEAYLKQIPAGRFGRPEEVAEAVA  221 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--------HHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHH--------HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            3455599998887764       389999999999987643221000        0000000011235689999999999


Q ss_pred             HhhcCCc--CCCceEEEcCC
Q 039623          198 NSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~  215 (292)
                      .++.++.  ..|+.|++.|.
T Consensus       222 ~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          222 FLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             HHTSGGGTTCCSCEEEESTT
T ss_pred             HHhCcccccccCCEEEECCC
Confidence            9997643  24677777643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.82  E-value=1.4e-20  Score=151.03  Aligned_cols=170  Identities=16%  Similarity=0.112  Sum_probs=125.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |+|+||||+|+||++++++|+++  +|++++|+     +++.+.+..... . .++.+|++|++++.++++   ++|+||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~-----~~~~~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRR-----AGALAELAREVG-A-RALPADLADELEAKALLEEAGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSC-----HHHHHHHHHHHT-C-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECC-----HHHHHHHHHhcc-C-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999998  99999997     555433322212 2 889999999999999988   899999


Q ss_pred             EcCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      |+||...                   +.++.++++++++.+ .+++|+ |+.....     +..+...|..+|..++.++
T Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~-----~~~~~~~Y~~sK~a~~~~~  145 (207)
T 2yut_A           72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYV-----QVPGFAAYAAAKGALEAYL  145 (207)
T ss_dssp             ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHH-----SSTTBHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhcc-----CCCCcchHHHHHHHHHHHH
Confidence            9998643                   456778888886555 678876 4432111     1123345555999998887


Q ss_pred             HH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          139 EA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       139 ~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      +.       .+++++++||+.+.+.....                  .+.....+++++|+|++++.+++++.
T Consensus       146 ~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          146 EAARKELLREGVHLVLVRLPAVATGLWAP------------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHTTTCEEEEECCCCBCSGGGGG------------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHhhhCCEEEEEecCcccCCCccc------------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            64       48999999999988764211                  01123568999999999999998764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.82  E-value=8.6e-20  Score=151.70  Aligned_cols=198  Identities=13%  Similarity=0.083  Sum_probs=132.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++..+.+|++|.+++.++++      
T Consensus        15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRK-----QENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999998     4443222 2222  3468889999999998888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++||+||...                    +.++..++++    +++.+ .+++|+ |+.......     .+...
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  163 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPF-----PNLGP  163 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----TTBHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCC-----CCchh
Confidence             7999999999531                    3344444444    45556 678876 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .+++++.++||.+.+........      ................+.+++|+|++++.+
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~v~~l  237 (260)
T 2zat_A          164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM------DKARKEYMKESLRIRRLGNPEDCAGIVSFL  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS------SHHHHHHHHHHHTCSSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            55599999888774       38999999999987764321100      000000011111223578999999999999


Q ss_pred             hcCCc--CCCceEEEcCCC
Q 039623          200 IDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~~  216 (292)
                      +.++.  ..|+.+++.|..
T Consensus       238 ~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          238 CSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTC
T ss_pred             cCcccCCccCCEEEECCCc
Confidence            97653  247788887644

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.82  E-value=7.4e-20  Score=150.88  Aligned_cols=194  Identities=11%  Similarity=0.106  Sum_probs=132.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+.. +   ...++.++.+|++|++++.++++     
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS-----GERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            469999999999999999999999999999998     444433222 2   24578999999999999988886     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||+||...                   +.++    +.+++.+++.+ .+++|+ |+.......     .+...
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~  156 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGN-----VGQVN  156 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCC-----TTCHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCC-----CCCch
Confidence              7999999999643                   2334    45555666666 788887 442211111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++++++|+.+.+.........        ....+........+++++|+|++++.+
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l  228 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEE--------IKQKYKEQIPLGRFGSPEEVANVVLFL  228 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH--------HHHHHHHTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHH--------HHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence            55599998887763       479999999999987643321100        000000001123478999999999999


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +....  ..|+.|++.|
T Consensus       229 ~~~~~~~~~G~~~~v~g  245 (248)
T 2pnf_A          229 CSELASYITGEVIHVNG  245 (248)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCchhhcCCCcEEEeCC
Confidence            97642  3467888764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.82  E-value=2e-19  Score=149.75  Aligned_cols=203  Identities=14%  Similarity=0.065  Sum_probs=128.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--c-------CCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--N-------LGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~-------~~v~~v~~D~~d~~~~~~~~   71 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.  .       .++.++.+|++|.+++.+++
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLD-----RAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            479999999999999999999999999999998     44433221 111  1       46889999999999988887


Q ss_pred             cc-------C-CEEEEcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCc
Q 039623           72 KQ-------V-DVVISTVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        72 ~~-------~-d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~  119 (292)
                      +.       + |+|||+||...                   +.++.++++++.+.    +...++|+ |+.......   
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  159 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---  159 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---
Confidence            64       3 99999999643                   44566666666543    21256776 443211111   


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchH
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                        .+...|..+|..++.+.+.       .+++++++||+.+.+..........    ..    .+........+.+++|+
T Consensus       160 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~~----~~~~~~~~~~~~~~~dv  229 (264)
T 2pd6_A          160 --VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKV----VD----KITEMIPMGHLGDPEDV  229 (264)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------------CTGGGCTTCSCBCHHHH
T ss_pred             --CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHH----HH----HHHHhCCCCCCCCHHHH
Confidence              1233455599998887763       5899999999999876433211100    00    00000111246789999


Q ss_pred             HHHHHHhhcCCc--CCCceEEEcCCCccccHHH
Q 039623          193 ATYTINSIDGPR--TLNKTLYIRPPGNVYSFNE  223 (292)
Q Consensus       193 a~~~~~~l~~~~--~~~~~~~~~~~~~~~t~~e  223 (292)
                      |++++.++..+.  ..|+.+++.|.. .++...
T Consensus       230 a~~~~~l~~~~~~~~~G~~~~v~gg~-~~~~~~  261 (264)
T 2pd6_A          230 ADVVAFLASEDSGYITGTSVEVTGGL-FMAENL  261 (264)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             HHHHHHHcCCcccCCCCCEEEECCCc-eecccc
Confidence            999999997542  346778887544 555443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.82  E-value=1.6e-19  Score=148.86  Aligned_cols=195  Identities=12%  Similarity=0.127  Sum_probs=125.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEe-cCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALV-RESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+|+||||+|+||++++++|+++|++|++++ |+     +++.+.+ +.+.  ..++.++.+|++|++++.++++     
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPA-----STSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTT-----CSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999994 54     3333222 2222  3468999999999999888876     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHH----HHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAK----IIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~----l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||+||...                   +.++.+    +++.+++.+ ..++|+ |+.......     .+...
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~  154 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGN-----AGQAN  154 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------CHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-----CCCcH
Confidence              7999999998642                   233334    444444556 678887 443222221     12344


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++++++|+.+.+.........        ....+........+++++|+|++++.+
T Consensus       155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (247)
T 2hq1_A          155 YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDK--------VKEMYLNNIPLKRFGTPEEVANVVGFL  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--------HHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchH--------HHHHHHhhCCCCCCCCHHHHHHHHHHH
Confidence            55599999888764       378999999999876532211000        000011111223578999999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +..+.  ..|+.|++.|.
T Consensus       227 ~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          227 ASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             cCcccccccCcEEEeCCC
Confidence            87642  24678888643

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.82  E-value=1.6e-19  Score=149.64  Aligned_cols=199  Identities=9%  Similarity=0.063  Sum_probs=135.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+.     + .+..+.+.  ..++.++.+|++|++++.++++       
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-----~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-----P-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-----C-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-----h-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999973     2 22222232  3458889999999999988887       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|++||+||...                       +..++.+++.+++.+ ..++|+ |+.......     .+...|.
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~  152 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGS-----TGKAAYV  152 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----TTBHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCC-----CCchhHH
Confidence            7999999999643                       225666777777777 688886 443222111     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceecccccccccc--CCCCCCCCCc---eeec-CCCcceEEeeccchHHHH
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ--IGAPAPPREK---VTIF-GDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~-~~~~~~~~~i~v~D~a~~  195 (292)
                      .+|..++.+.+.       .++++++++||.+.++.......  ..   .....   ...+ ........+++++|+|++
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~  229 (255)
T 2q2v_A          153 AAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAA---NGGDPLQAQHDLLAEKQPSLAFVTPEHLGEL  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHH---HTCCHHHHHHHHHTTTCTTCCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccc---cccchHHHHHHHHhccCCCCCCcCHHHHHHH
Confidence            599999888764       47999999999998764322110  00   00000   0001 122223467899999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++..+.  ..|+.+++.|.
T Consensus       230 ~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          230 VLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCCccCCCCCCEEEECCC
Confidence            999997643  23677887653

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.82  E-value=5.6e-19  Score=146.76  Aligned_cols=203  Identities=10%  Similarity=0.084  Sum_probs=132.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.    ..++.++.+|++|++++.++++    
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            8 KLAVVTAGSSGLGFASALELARNGARLLLFSRN-----REKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            479999999999999999999999999999998     4444322 2222    2278999999999999988886    


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++||+||...                       +..++.+++.+++.+ ..++|+ |+.......     .+...
T Consensus        83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  156 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPW-----QDLAL  156 (260)
T ss_dssp             TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTBHH
T ss_pred             hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCC-----CCCch
Confidence              5999999999643                       223466666776777 688886 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCC--CCCCCc-eeecCCCcceEEeeccchHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAP--APPREK-VTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      |..+|..++.+.+.       .|+++++++||++.+............  ...... ...+........+.+++|+|+++
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  236 (260)
T 2z1n_A          157 SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVV  236 (260)
T ss_dssp             HHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            55599998887764       489999999999987653311000000  000000 00011111122467899999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++..+.  ..|+.+++.|.
T Consensus       237 ~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          237 AFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             HHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHhCccccCCCCCEEEeCCC
Confidence            99997642  34677777643

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.82  E-value=3.7e-19  Score=147.54  Aligned_cols=202  Identities=15%  Similarity=0.148  Sum_probs=132.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+..+.+.  . .++.+|++|++++.++++       ++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLR-----PEGKEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----TTHHHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     33322222222  4 889999999988887775       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++.    +.+ ..++|+ |+.......     ++...|..+
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~s  152 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE-----QENAAYNAS  152 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC-----TTBHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCC-----CCChhHHHH
Confidence            99999999643                   344555555543    445 678876 443222211     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .+++++.++||.+.+...........  ........+........+++++|+|++++.++.++
T Consensus       153 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~  230 (256)
T 2d1y_A          153 KGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP--DPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhcccccc--CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999888764       47999999999998764332110000  00000111111222345789999999999999764


Q ss_pred             c--CCCceEEEcCCCcccc
Q 039623          204 R--TLNKTLYIRPPGNVYS  220 (292)
Q Consensus       204 ~--~~~~~~~~~~~~~~~t  220 (292)
                      .  ..|+.+++.|.. .++
T Consensus       231 ~~~~~G~~~~v~gG~-~~~  248 (256)
T 2d1y_A          231 ASFITGAILPVDGGM-TAS  248 (256)
T ss_dssp             GTTCCSCEEEESTTG-GGB
T ss_pred             hcCCCCCEEEECCCc-ccc
Confidence            2  346778887543 444

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.82  E-value=6.6e-19  Score=146.11  Aligned_cols=196  Identities=9%  Similarity=0.063  Sum_probs=127.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+..     +.+........++.++.+|++|.+++.++++       ++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP-----AGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH-----HHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46999999999999999999999999999999843     3222222224578999999999999888876       79


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHh----------CCcceeec-cCCCCCCccCCcc
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEA----------GNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~----------~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                      |++||+||...                       +.++..+++++.+.          + ..++|. |+.......    
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~-~g~iv~isS~~~~~~~----  157 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGE-RGVIVNTASIAAFDGQ----  157 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCC----
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCC-CeEEEEEechhhccCC----
Confidence            99999999652                       44566666666553          2 355665 443211111    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce-EEeeccchH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG-AVYNKEDDI  192 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~  192 (292)
                       .+...|..+|..++.+.+.       .|+++..++||.+.+..........        .......... ..+.+++|+
T Consensus       158 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--------~~~~~~~~p~~~r~~~~~dv  228 (257)
T 3tpc_A          158 -IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV--------QDALAASVPFPPRLGRAEEY  228 (257)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------------CCSSSSCSCBCHHHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH--------HHHHHhcCCCCCCCCCHHHH
Confidence             1234455599998887653       5899999999999876543221110        0001111111 356789999


Q ss_pred             HHHHHHhhcCCcCCCceEEEcCCC
Q 039623          193 ATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      |++++.++++....|+.+++.|.-
T Consensus       229 a~~v~~l~s~~~itG~~i~vdGG~  252 (257)
T 3tpc_A          229 AALVKHICENTMLNGEVIRLDGAL  252 (257)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             HHHHHHHcccCCcCCcEEEECCCc
Confidence            999999998755567888887543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.82  E-value=9.8e-20  Score=152.40  Aligned_cols=204  Identities=12%  Similarity=0.041  Sum_probs=135.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+|+||||+|+||++++++|+++|++|++++|+.    +++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999999942    3333222 2222  4568899999999999988886      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhCC-cceeec-cCCCCC-CccCCccCCCCcchHH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGN-VKRFLP-SEFGND-VDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~-~~~~i~-s~~g~~-~~~~~~~~~~~~~~~~  129 (292)
                       ++|+|||+||...                   +.++.++++++.+.-. -.++|+ |+.... ...     .+...|..
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----~~~~~Y~~  172 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI-----PNHALYAG  172 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC-----CSCHHHHH
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC-----CCCchHHH
Confidence             7899999998642                   5567778887776510 146665 443222 111     12334555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCC----CCC-CCceeecCCCcceEEeeccchHHHHHH
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAP----APP-REKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      +|..++.+++.       .++++++++||.+.+............    ... ......+..+.....+++++|+|++++
T Consensus       173 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  252 (274)
T 1ja9_A          173 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS  252 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            99999988764       389999999999987643311110000    000 000111112223446889999999999


Q ss_pred             HhhcCCcC--CCceEEEcC
Q 039623          198 NSIDGPRT--LNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~~--~~~~~~~~~  214 (292)
                      .++.++..  .|+.|++.|
T Consensus       253 ~l~~~~~~~~~G~~~~v~g  271 (274)
T 1ja9_A          253 ALCQEESEWINGQVIKLTG  271 (274)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCcccccccCcEEEecC
Confidence            99976432  467888864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.82  E-value=6.4e-19  Score=146.48  Aligned_cols=204  Identities=16%  Similarity=0.104  Sum_probs=127.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||++++++|+++|++|++++|+     .++.+.+.......+.++.+|++|.+++.++++       ++
T Consensus        10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A           10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD-----KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998     666555444446679999999999998888776       68


Q ss_pred             CEEEEcCcCCC--------------------chhHHHHHHHH----HHhC---Ccceeec-cCCCCCCccCCccCCCCcc
Q 039623           75 DVVISTVSRGQ--------------------IPEQAKIIAAV----KEAG---NVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        75 d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~---~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                      |++||+||...                    +.++..+++++    ++.+   ...++|. |+.......     .....
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~~  159 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR-----PNLAW  159 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC-----TTCHH
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC-----CCccH
Confidence            99999999642                    33344444443    3321   0234655 443322221     12234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++..++||.+.+..........    .......+........+++++|+|++++.+
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  235 (261)
T 3n74_A          160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED----SEEIRKKFRDSIPMGRLLKPDDLAEAAAFL  235 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC----cHHHHHHHhhcCCcCCCcCHHHHHHHHHHH
Confidence            55599999888764       5799999999998876543322110    011111112222234578999999999999


Q ss_pred             hcCCc--CCCceEEEcCCCcccc
Q 039623          200 IDGPR--TLNKTLYIRPPGNVYS  220 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~~~~~t  220 (292)
                      +....  ..|+.+++.|.. .++
T Consensus       236 ~s~~~~~itG~~i~vdgG~-~~~  257 (261)
T 3n74_A          236 CSPQASMITGVALDVDGGR-SIG  257 (261)
T ss_dssp             TSGGGTTCCSCEEEESTTT-TC-
T ss_pred             cCCcccCcCCcEEEecCCc-ccC
Confidence            97543  357788887544 444

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.82  E-value=2e-19  Score=149.76  Aligned_cols=199  Identities=14%  Similarity=0.123  Sum_probs=132.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |++++||||+|+||+++++.|+++|++|++++|+.    .+..+.+...   ...++.++.+|++|.+++.++++     
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSD----TTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCC----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            36799999999999999999999999999998873    2222222222   13568999999999999888876     


Q ss_pred             --cCCEEEEcCcC--CC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 --QVDVVISTVSR--GQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 --~~d~vi~~a~~--~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                        ++|++||+||.  ..                   +.++..+++++    ++.+ ..++|. |+.+....   .+..+.
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~---~~~~~~  158 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSA---PGWIYR  158 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGC---CCCTTC
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhccc---CCCCCC
Confidence              78999999993  21                   34555555555    6666 677776 44322111   011123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .|+++..++||.+.+..........        ............+.+++|+|++++
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--------~~~~~~~~p~~r~~~~~dva~~v~  230 (264)
T 3i4f_A          159 SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEA--------RQLKEHNTPIGRSGTGEDIARTIS  230 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHH--------HHC--------CCCCHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHH--------HHHHhhcCCCCCCcCHHHHHHHHH
Confidence            4455599998888763       5799999999999876543221110        000111122335678999999999


Q ss_pred             HhhcCCc--CCCceEEEcCC
Q 039623          198 NSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~  215 (292)
                      .++....  ..|+++++.|.
T Consensus       231 ~l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          231 FLCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             HHHSGGGTTCCSCEEEESCS
T ss_pred             HHcCcccCCCCCcEEEEcCc
Confidence            9998653  34788888754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.81  E-value=3.4e-19  Score=147.97  Aligned_cols=197  Identities=15%  Similarity=0.161  Sum_probs=131.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLD-----EAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            469999999999999999999999999999998     4443222 2222  3468999999999999888875      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHH----HhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVK----EAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~----~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                       ++|+|||+||...                    +.++.++++++.    +.+ ..++++ |+ ++....    +..+..
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----~~~~~~  163 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVN----RPQQQA  163 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----SSSCCH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccC----CCCCcc
Confidence             6899999998531                    344555555554    345 577776 33 332211    111224


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceecccccc-ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLP-TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..++.+++.       .+++++++||+.+.+.... .....       .....+........+++++|+|++++
T Consensus       164 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~~  236 (260)
T 3awd_A          164 AYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKP-------ELYDAWIAGTPMGRVGQPDEVASVVQ  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCH-------HHHHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCCh-------HHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            555599999988764       5899999999999876543 11100       00000000111234689999999999


Q ss_pred             HhhcCCc--CCCceEEEcCC
Q 039623          198 NSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~  215 (292)
                      .++..+.  ..|+.+++.|.
T Consensus       237 ~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          237 FLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhccCCCcEEEECCc
Confidence            9997542  24677887653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.81  E-value=2.5e-19  Score=148.25  Aligned_cols=199  Identities=13%  Similarity=0.084  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|++++.++++       ++
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     555433322224578999999999998887775       47


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                       +..++.+++.+++.+  .++|+ |+.......     .+...|..+
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~Y~~s  154 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPI-----EQYAGYSAS  154 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCC-----CCCccHHHH
Confidence            99999999643                       123445555555544  67776 443222111     123345559


Q ss_pred             HHHHHHHHHH-------c--CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          131 KIKIRRAIEA-------E--GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~~-------~--~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      |..++.+.+.       .  +++++++|||.+.+..........   .......-.........+.+++|+|++++.++.
T Consensus       155 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s  231 (253)
T 1hxh_A          155 KAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh---hhHHHHhhhhccCccCCCCCHHHHHHHHHHHcC
Confidence            9999888764       3  899999999999876533211100   000000000001112356899999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      .+.  ..|+.+.+.|.
T Consensus       232 ~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          232 DESSVMSGSELHADNS  247 (253)
T ss_dssp             GGGTTCCSCEEEESSS
T ss_pred             ccccCCCCcEEEECCC
Confidence            653  34677777653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.81  E-value=5.5e-19  Score=147.12  Aligned_cols=195  Identities=14%  Similarity=0.085  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|++++.++++       ++
T Consensus        13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           13 LVAVITGGASGLGLATAERLVGQGASAVLLDLP-----NSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECT-----TSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----cHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            579999999999999999999999999999998     334333222224578999999999999988886       79


Q ss_pred             CEEEEcCcCC--------------C-----------chhHHHHHHHHHHh----------CCcceeec-cCCCCCCccCC
Q 039623           75 DVVISTVSRG--------------Q-----------IPEQAKIIAAVKEA----------GNVKRFLP-SEFGNDVDRSQ  118 (292)
Q Consensus        75 d~vi~~a~~~--------------~-----------~~~~~~l~~a~~~~----------~~~~~~i~-s~~g~~~~~~~  118 (292)
                      |+|||+||..              .           +.++..+++++.+.          + ..++|+ |+......   
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~---  163 (265)
T 2o23_A           88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEG---  163 (265)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHC---
T ss_pred             CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcCC---
Confidence            9999999863              1           44566677776654          4 567776 44321111   


Q ss_pred             ccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce-EEeeccc
Q 039623          119 NVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG-AVYNKED  190 (292)
Q Consensus       119 ~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~  190 (292)
                        ..+...|..+|..++.+.+.       .++++++++||++.+.........    . ....   ...... ..+.+++
T Consensus       164 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~~~~---~~~~~~~~~~~~~~  233 (265)
T 2o23_A          164 --QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----V-CNFL---ASQVPFPSRLGDPA  233 (265)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHH---HHTCSSSCSCBCHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH----H-HHHH---HHcCCCcCCCCCHH
Confidence              11233455599998887763       479999999999877643221100    0 0000   000001 2467899


Q ss_pred             hHHHHHHHhhcCCcCCCceEEEcCC
Q 039623          191 DIATYTINSIDGPRTLNKTLYIRPP  215 (292)
Q Consensus       191 D~a~~~~~~l~~~~~~~~~~~~~~~  215 (292)
                      |+|++++.++.++...|+.+.+.|.
T Consensus       234 dva~~~~~l~~~~~~~G~~i~vdgG  258 (265)
T 2o23_A          234 EYAHLVQAIIENPFLNGEVIRLDGA  258 (265)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhhcCccCceEEEECCC
Confidence            9999999999865556778888754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.81  E-value=3.4e-19  Score=148.32  Aligned_cols=201  Identities=11%  Similarity=0.037  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+.+......++.++.+|++|++++.++++       ++
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLD-----VMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            479999999999999999999999999999998     554433322222378899999999999988876       79


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++.+    .+...++|. |+.......     ++...|..+
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~s  162 (263)
T 3ak4_A           88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA-----PLLAHYSAS  162 (263)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----TTCHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----CCchhHHHH
Confidence            99999999643                   3344555555543    221356765 443222111     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccc-----cCCCCCCC-CCceeecCCCcceEEeeccchHHHHHH
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLA-----QIGAPAPP-REKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      |..++.+.+.       .|+++++++|+.+.+.......     ...   .. ......+........+++++|+|++++
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  239 (263)
T 3ak4_A          163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRG---MTPEAVRAEYVSLTPLGRIEEPEDVADVVV  239 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHT---SCHHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccc---cCcHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9998888764       4899999999999876432211     000   00 000000111111235789999999999


Q ss_pred             HhhcCCc--CCCceEEEcCC
Q 039623          198 NSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~  215 (292)
                      .++.++.  ..|+.+++.|.
T Consensus       240 ~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          240 FLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             HHHSGGGTTCCSCEEEESSS
T ss_pred             HHhCccccCCCCCEEEECcC
Confidence            9997642  34677888754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.81  E-value=1.4e-18  Score=145.95  Aligned_cols=204  Identities=13%  Similarity=0.098  Sum_probs=131.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.    .++.+.+. .+   ....+.++.+|++|.+++.++++     
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA----PDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC----HHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----hHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999952    33332222 22   24578999999999999888875     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++||+||...                   +.++..+++++    ++.+ ..++|. |+.......     .....
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  175 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVAS-----PFKSA  175 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCC-----CCchH
Confidence              6899999999753                   34455555554    5555 577776 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCC--CCCCCc--eeecCCCcceEEeeccchHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAP--APPREK--VTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      |..+|..++.+.+.       .|+++..++||.+.+............  ......  ...+..+.....+.+++|+|++
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~  255 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASL  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence            55599999888763       479999999999987654322111000  000000  0112333445678999999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++....  ..|+.+++.|.
T Consensus       256 v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          256 ALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             HHHHHSSGGGGCCSCEEEESTT
T ss_pred             HHHHcCCCcCCCCCcEEEECCC
Confidence            999998653  34778888643

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=2e-20  Score=156.13  Aligned_cols=208  Identities=13%  Similarity=0.085  Sum_probs=136.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.    ..++.++.+|++|++++.++++    
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWN-----LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   82 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            479999999999999999999999999999998     4443221 2221    3458899999999999888775    


Q ss_pred             ---cCCEEEEcCcCCC---------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           73 ---QVDVVISTVSRGQ---------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        73 ---~~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                         ++|++||+||...               +..++.+++.+++.+  ...++|+ |+.......     .+...|..+|
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK  157 (267)
T 2gdz_A           83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----AQQPVYCASK  157 (267)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----TTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----CCCchHHHHH
Confidence               4799999999753               224566667665542  1367776 443221111     1223455599


Q ss_pred             HHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCce---eecCCCcceEEeeccchHHHHHHHh
Q 039623          132 IKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV---TIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       132 ~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..++.+.+.         .++++++++||++.+..........   ......   ...........+++++|+|++++.+
T Consensus       158 ~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l  234 (267)
T 2gdz_A          158 HGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEE---NMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHH---HHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccccc---ccchhhhHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence            998877653         5799999999999766432211000   000000   0000001123468999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHH
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNE  223 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e  223 (292)
                      +.++...|+++++.++. .+++.|
T Consensus       235 ~s~~~~~G~~~~v~gg~-~~~~~~  257 (267)
T 2gdz_A          235 IEDDALNGAIMKITTSK-GIHFQD  257 (267)
T ss_dssp             HHCTTCSSCEEEEETTT-EEEECC
T ss_pred             hcCcCCCCcEEEecCCC-cccccC
Confidence            98766668888888655 666544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.81  E-value=7e-19  Score=145.57  Aligned_cols=193  Identities=12%  Similarity=0.063  Sum_probs=116.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||++++++|+++|++|++++|+     .++.+.+. .+.  ...+.++.+|++|++++.++++      
T Consensus        10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A           10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADIN-----AEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     55443332 222  3468899999999999888876      


Q ss_pred             -cCCEEEEcCcCCC----------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 -QVDVVISTVSRGQ----------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 -~~d~vi~~a~~~~----------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                       ++|++||+||...                      +.    .++.+++.+++.+ ..++|+ |+.....        +.
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--------~~  155 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL--------YS  155 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC--------CC
Confidence             7999999999731                      22    3566666666666 677776 4432211        12


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .++++..++||.+.+.........       ..............+.+++|+|++++
T Consensus       156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~~  228 (253)
T 3qiv_A          156 NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK-------EMVDDIVKGLPLSRMGTPDDLVGMCL  228 (253)
T ss_dssp             ----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------CCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH-------HHHHHHhccCCCCCCCCHHHHHHHHH
Confidence            3344499998888764       378999999999987643221110       00111112222345678999999999


Q ss_pred             HhhcCCcC--CCceEEEcCC
Q 039623          198 NSIDGPRT--LNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~~--~~~~~~~~~~  215 (292)
                      .++.+...  .|+.|++.|.
T Consensus       229 ~l~s~~~~~~tG~~~~vdgG  248 (253)
T 3qiv_A          229 FLLSDEASWITGQIFNVDGG  248 (253)
T ss_dssp             HHHSGGGTTCCSCEEEC---
T ss_pred             HHcCccccCCCCCEEEECCC
Confidence            99976432  4677777653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.81  E-value=1.6e-18  Score=141.75  Aligned_cols=172  Identities=15%  Similarity=0.159  Sum_probs=117.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+.... .++.++.+|++|.+++.++++       ++
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARD-----EKRLQALAAEL-EGALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh-hhceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998     54443332211 278999999999998887765       68


Q ss_pred             CEEEEcCcCCC-------------------ch----hHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IP----EQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~----~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.    .++.+++.+++.+ .+++|+ |+.......     .+...|..+
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~~s  153 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPF-----KGGAAYNAS  153 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCC-----TTCHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCC-----CCCchhhHH
Confidence            99999999643                   22    2346666667666 788887 544322221     223445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .+++++++|||.+.+......         ...          +.+++++|+|++++.++.++
T Consensus       154 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~----------~~~~~~~dvA~~~~~l~~~~  214 (234)
T 2ehd_A          154 KFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT---------PGQ----------AWKLKPEDVAQAVLFALEMP  214 (234)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------------CCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc---------ccc----------cCCCCHHHHHHHHHHHhCCC
Confidence            9988877653       589999999998875532110         000          11579999999999999865


Q ss_pred             c
Q 039623          204 R  204 (292)
Q Consensus       204 ~  204 (292)
                      .
T Consensus       215 ~  215 (234)
T 2ehd_A          215 G  215 (234)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.81  E-value=4.2e-19  Score=147.93  Aligned_cols=195  Identities=16%  Similarity=0.112  Sum_probs=133.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|.+.+|+     .++.+.+......++.++.+|++|++++.++++       ++
T Consensus        28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTR-----EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     555544433345679999999999999888775       69


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.+    ++.++..+++.+ ..++|. |+.......     .+...|..+
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~-----~~~~~Y~as  176 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGN-----PGQTNYCAA  176 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC------------CHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCC-----CCchhHHHH
Confidence            99999999753                   233    556666666666 677876 443222221     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||.+.+........        .....+........+.+++|+|++++.++...
T Consensus       177 Kaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~--------~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~  248 (266)
T 3grp_A          177 KAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNE--------KQKEAIMAMIPMKRMGIGEEIAFATVYLASDE  248 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCH--------HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9998887763       47999999999997654322110        00001111122345678899999999999764


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+++.|.
T Consensus       249 ~~~itG~~i~vdGG  262 (266)
T 3grp_A          249 AAYLTGQTLHINGG  262 (266)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             ccCccCCEEEECCC
Confidence            3  24777888653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.81  E-value=3.4e-19  Score=148.38  Aligned_cols=205  Identities=11%  Similarity=0.075  Sum_probs=132.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+.... .+..+.+......++.++.+|++|.+++.++++       .+
T Consensus        15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   93 (265)
T 1h5q_A           15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA-VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   93 (265)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH-HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh-HHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999999999974321 111111111124578999999999998888775       38


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccC--CccCCCCcchH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRS--QNVVEPAKSAY  128 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~--~~~~~~~~~~~  128 (292)
                      |++||+||...                   +.++.++++++.+    .+...++|+ |+........  ..+..+...|.
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~  173 (265)
T 1h5q_A           94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN  173 (265)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccH
Confidence            99999999643                   3455566666543    331367776 4422111110  11122234455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+++.       .+++++++||+++.+.........        .............+.+++|+|++++.++.
T Consensus       174 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l~~  245 (265)
T 1h5q_A          174 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK--------IRDHQASNIPLNRFAQPEEMTGQAILLLS  245 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH--------HHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchh--------HHHHHHhcCcccCCCCHHHHHHHHHhhcc
Confidence            599999988764       489999999999987653321000        00000000112246899999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      ++.  ..|+.+++.|.
T Consensus       246 ~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          246 DHATYMTGGEYFIDGG  261 (265)
T ss_dssp             GGGTTCCSCEEEECTT
T ss_pred             CchhcCcCcEEEecCC
Confidence            643  35777888653

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.81  E-value=1e-18  Score=146.03  Aligned_cols=196  Identities=13%  Similarity=0.067  Sum_probs=135.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+........++.++.+|++|.+++.++++       ++
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGARVVLADLP-----ETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECT-----TSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     444433333335678999999999999888876       68


Q ss_pred             CEEEEcCcCCC---------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           75 DVVISTVSRGQ---------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        75 d~vi~~a~~~~---------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      |++||+||...                     +.++..+++++    ++.+ ..++|+ |+.......     .+...|.
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~  160 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAY-----DMSTAYA  160 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBC-----SSCHHHH
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCC-----CCChHHH
Confidence            99999999651                     34455555555    6666 677776 443222221     2234455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .|+++..++||.+.+........       ......+........+.+++|+|++++.++.
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s  233 (271)
T 3tzq_B          161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP-------QPIVDIFATHHLAGRIGEPHEIAELVCFLAS  233 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C-------HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC-------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            599999888764       58999999999998764321100       0000011111112345788999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      +..  ..|+.+++.|.
T Consensus       234 ~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          234 DRAAFITGQVIAADSG  249 (271)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             cccCCcCCCEEEECCC
Confidence            643  34778888754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.81  E-value=5e-19  Score=145.89  Aligned_cols=196  Identities=14%  Similarity=0.121  Sum_probs=131.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.    +++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGN----EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999999931    4443322 2222  3468899999999999888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.+    ++.+++.+++.+ ..++|+ |+.......     +....|
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  154 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGN-----PGQANY  154 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTBHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCC-----CCCchH
Confidence             6999999999643                   223    555666666666 678886 443211111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|++++.++||.+.+.......        ......+........+++++|+|++++.++
T Consensus       155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  226 (246)
T 2uvd_A          155 VAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--------ENIKAEMLKLIPAAQFGEAQDIANAVTFFA  226 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--------TTHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            5599998887653       5899999999999766432110        000000000011234789999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ..+.  ..|+.+.+.|.
T Consensus       227 s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          227 SDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CchhcCCCCCEEEECcC
Confidence            7542  24677777653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.80  E-value=6.4e-19  Score=147.70  Aligned_cols=199  Identities=13%  Similarity=0.115  Sum_probs=135.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.......+..+.+|++|.+++.++++       ++
T Consensus        28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVN-----EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     555544444345678999999999999888776       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++    ++.+ ..++|. |+.......     .+...|..+
T Consensus       103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  176 (277)
T 4dqx_A          103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAI-----ADRTAYVAS  176 (277)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCC-----CCChhHHHH
Confidence            99999999643                   34444444444    4444 467776 443222211     123445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceee---cCCCcceEEeeccchHHHHHHHhh
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI---FGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      |..++.+.+.       .|+++..++||.+.+.........     .......   +........+.+++|+|++++.++
T Consensus       177 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~  251 (277)
T 4dqx_A          177 KGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE-----AKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT-----CSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccc-----ccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHh
Confidence            9999888764       479999999999976642211110     0000000   112222345678999999999999


Q ss_pred             cCCc--CCCceEEEcCCC
Q 039623          201 DGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~~  216 (292)
                      ....  ..|+.+++.|..
T Consensus       252 s~~~~~itG~~i~vdGG~  269 (277)
T 4dqx_A          252 SDRSRFATGSILTVDGGS  269 (277)
T ss_dssp             SGGGTTCCSCEEEESSSS
T ss_pred             CCccCCCcCCEEEECCch
Confidence            7653  347788887543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.80  E-value=2.9e-18  Score=141.61  Aligned_cols=194  Identities=12%  Similarity=0.074  Sum_probs=122.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+..     ..       ..++..+.+|++|++++.++++       ++
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-----~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----QE-------QYPFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC-----SS-------CCSSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh-----hh-------cCCceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999843     11       1247889999999999988876       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++    ++.+ ..++|+ |+.......     .+...|..+
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~s  149 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPR-----IGMSAYGAS  149 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-----TTCHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC-----CCCchHHHH
Confidence            99999999642                   33444555554    5566 677776 443222111     123445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceee----cCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI----FGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..++.+.+.       .++++++++||.+.+..........  ......+..    .........+.+++|+|++++.+
T Consensus       150 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  227 (250)
T 2fwm_X          150 KAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD--DAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFL  227 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh--hHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHH
Confidence            9999888764       4899999999999876532211000  000000000    00011123468999999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +.++.  ..|+.+.+.|.
T Consensus       228 ~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          228 ASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCccccCCCCCEEEECCC
Confidence            97642  34777887754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.80  E-value=4.5e-19  Score=147.36  Aligned_cols=200  Identities=13%  Similarity=0.104  Sum_probs=132.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHH-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAI-------   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~-------   71 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|++++.+++       
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRN-----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     4444322 2222  345788999999999888877       


Q ss_pred             -ccCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           72 -KQVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        72 -~~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       .++|++||+||...                   +.++.++++++    ++.+ ..++|+ |+.......     ++...
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  158 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAV-----PYEAV  158 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCC-----TTCHH
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC-----CCcch
Confidence             46999999999642                   34455555555    4555 678876 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .+++++.++||.+.+..........   .....+..+........+.+++|+|++++.+
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l  235 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP---EQKENLNKLIDRCALRRMGEPKELAAMVAFL  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH---HHHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccCh---hhHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            55599999988874       3799999999999776432211000   0000000011111223578999999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +..+.  ..|+.+++.|.
T Consensus       236 ~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          236 CFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             cCccccCCCCCEEEECCC
Confidence            97542  24677777654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.80  E-value=3e-18  Score=141.43  Aligned_cols=196  Identities=13%  Similarity=0.043  Sum_probs=127.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-HhhhhcCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFKNLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+..    ++.+. ++. ...++.++.+|++|++++.++++       +
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA----PEAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch----hHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            46999999999999999999999999999999831    33321 111 13468899999999998887764       6


Q ss_pred             CCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|++||+||...                   +.+    ++.++..+++.+ ..++|+ |+.......     ++...|..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~a  156 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI-----EAYTHYIS  156 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC-----SSCHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC-----CCchhHHH
Confidence            899999999643                   223    445555566666 678876 443221111     12344555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceecccccc-ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLP-TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      +|..++.+.+.       .|++++.++||.+.+.... ..... ...... ...     .....+.+++|+|++++.++.
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~-~~~-----~~~~~~~~p~dva~~~~~l~s  229 (249)
T 2ew8_A          157 TKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-MFDVLP-NML-----QAIPRLQVPLDLTGAAAFLAS  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTT-----SSSCSCCCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-hhhHHH-Hhh-----CccCCCCCHHHHHHHHHHHcC
Confidence            99999888764       4899999999999876533 11100 000000 000     112346899999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      .+.  ..|+.+.+.|.
T Consensus       230 ~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          230 DDASFITGQTLAVDGG  245 (249)
T ss_dssp             GGGTTCCSCEEEESSS
T ss_pred             cccCCCCCcEEEECCC
Confidence            542  34677777653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.80  E-value=5.7e-19  Score=147.95  Aligned_cols=202  Identities=11%  Similarity=0.039  Sum_probs=133.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++..+.+|++|++++.++++       ++
T Consensus        30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADID-----GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998     555544433335678999999999998887775       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||||...                   +.++..++++    +++.+ ..++|. |+.......     .+...|..+
T Consensus       105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~-----~~~~~Y~as  178 (277)
T 3gvc_A          105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAV-----GGTGAYGMS  178 (277)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC-----CCchhHHHH
Confidence            99999999753                   3344444444    44455 567776 443222221     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||.+.+...................... .......+.+++|+|++++.++.+.
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~pedvA~~v~~L~s~~  257 (277)
T 3gvc_A          179 KAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSM-IARLQGRMAAPEEMAGIVVFLLSDD  257 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHH-HHHHHSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhh-hhccccCCCCHHHHHHHHHHHcCCc
Confidence            9999888763       5899999999999876433221100000000000000 0011234678999999999999764


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+++.|.
T Consensus       258 a~~itG~~i~vdGG  271 (277)
T 3gvc_A          258 ASMITGTTQIADGG  271 (277)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             cCCccCcEEEECCc
Confidence            3  34778888754

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.80  E-value=7.4e-19  Score=146.62  Aligned_cols=200  Identities=13%  Similarity=0.091  Sum_probs=133.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.    ..++.++.+|++|++++.++++    
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     4444322 2221    4568899999999999888876    


Q ss_pred             ---cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                         ++|++||+||...                        +..++.+++.+++.+ ..++|. |+.......     .+.
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~  162 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI-----GNQ  162 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC-----SSB
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCC-----CCC
Confidence               6899999998531                        233456667777776 678876 443222211     123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceecccccccc--c-cCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTL--A-QIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      ..|..+|..++.+.+.       .|++++.++||.+.+......  . ...   ........+........+.+++|+|+
T Consensus       163 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~r~~~~~dvA~  239 (267)
T 1iy8_A          163 SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE---NPRKAAEEFIQVNPSKRYGEAPEIAA  239 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT---CHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChh---hhhhHHHHHhccCCCCCCcCHHHHHH
Confidence            4455599999888763       489999999999987643221  0 000   00000000001111234679999999


Q ss_pred             HHHHhhcCCc--CCCceEEEcCC
Q 039623          195 YTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +++.++..+.  ..|+.+.+.|.
T Consensus       240 ~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          240 VVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHcCccccCCCCCEEEECCC
Confidence            9999997642  34677777654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.80  E-value=5.3e-19  Score=146.95  Aligned_cols=199  Identities=13%  Similarity=0.057  Sum_probs=129.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||++++++|+++|++|++++|+.    .++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK----EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCC----hHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999999931    3333222 2222  3457889999999998888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|+|||+||...                   +.++..+++++.    +.+...++|+ |+......     ..+...|
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y  158 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----WPLFVHY  158 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----CTTCHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----CCCccHH
Confidence             7899999999643                   334444444443    3321356766 54332211     1233455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .+++++++||+.+.+.........      ......+........+.+++|+|++++.++
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  232 (261)
T 1gee_A          159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD------PEQRADVESMIPMGYIGEPEEIAAVAAWLA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS------HHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC------hhHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            5599988887763       489999999999987654321100      000000000011124689999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       233 ~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          233 SSEASYVTGITLFADGG  249 (261)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CccccCCCCcEEEEcCC
Confidence            7542  24677777653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.80  E-value=3e-19  Score=147.37  Aligned_cols=195  Identities=14%  Similarity=0.115  Sum_probs=133.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+..........+.+|++|++++.++++       ++
T Consensus        10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A           10 KVALVTGASRGIGKAIAELLAERGAKVIGTATS-----ESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998     555554444445567899999999999888876       69


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||||...                   +.++..+++++    ++.+ ..++|. |+......     ..+...|..+
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~as  158 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMG-----NAGQANYAAA  158 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-----CTTCHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCC-----CCCChHHHHH
Confidence            99999999753                   33444555544    4455 567776 44221111     1123445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||.+.+.......        ...............+.+++|+|++++.++...
T Consensus       159 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~  230 (248)
T 3op4_A          159 KAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN--------DEQRTATLAQVPAGRLGDPREIASAVAFLASPE  230 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC--------HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC--------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            9998887763       4799999999998765432110        000000111112335678999999999999764


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+++.|.
T Consensus       231 ~~~itG~~i~vdgG  244 (248)
T 3op4_A          231 AAYITGETLHVNGG  244 (248)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             cCCccCcEEEECCC
Confidence            3  24777888653

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.80  E-value=3.2e-19  Score=147.07  Aligned_cols=196  Identities=14%  Similarity=0.118  Sum_probs=133.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+.    .++.+.+. .+.  ..++.++.+|++|.+++.++++      
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS----KEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999988863    23332222 222  3468899999999999888876      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++.++++++    ++.+ ..++|+ |+.......     ++...|
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  154 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGN-----PGQANY  154 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCC-----CCChHH
Confidence             6899999999753                   44566666665    5555 577776 442211111     123445


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|+++..++||.+.+.........        .............+.+++|+|++++.++
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~~~dva~~v~~l~  226 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--------LKEQMLTQIPLARFGQDTDIANTVAFLA  226 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHH--------HHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            5599998888763       579999999999987643221100        0001111122345678899999999999


Q ss_pred             cCCcC--CCceEEEcCC
Q 039623          201 DGPRT--LNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~~--~~~~~~~~~~  215 (292)
                      ..+..  .|+.+++.|.
T Consensus       227 s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          227 SDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CccccCCCCCEEEeCCC
Confidence            76532  3778888653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.80  E-value=8.5e-19  Score=144.54  Aligned_cols=195  Identities=13%  Similarity=0.131  Sum_probs=132.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +.  ...+.++.+|++|++++.++++      
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATS-----QASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     554433322 21  3568999999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++.++++++    .+.+ ..++|+ |+......     .+....|
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y  154 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAG-----NPGQTNY  154 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC-----CTTCHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccC-----CCCcHHH
Confidence             4799999999753                   34444455544    4445 467776 43221111     1123445


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .++++..++||.+.+.......        ...............+.+++|+|++++.++
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  226 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT--------DEQKSFIATKIPSGQIGEPKDIAAAVAFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC--------HHHHHHHHTTSTTCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc--------HHHHHHHhhcCCCCCCcCHHHHHHHHHHHh
Confidence            5599988887763       5799999999998765432211        001111122233446789999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       227 s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          227 SEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCCcCCccCCEEEECCC
Confidence            7643  24778888654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.80  E-value=6.8e-19  Score=145.92  Aligned_cols=200  Identities=16%  Similarity=0.142  Sum_probs=134.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +.  ..++.++.+|++|.+++.++++      
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A           13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK-----SEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     544433322 21  3568999999999998888775      


Q ss_pred             -cCCEEEEcCcCCC------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       ++|++||+||...                  +.++..+++++    ++.+ ..++|. |+.......     .+...|.
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~  161 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTN-----VRMASYG  161 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCC-----TTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCC-----CCchHHH
Confidence             6899999999643                  34455555554    4555 567776 443222111     1234455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .|+++..++||.+.+.........       ..............+.+++|+|++++.++.
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~p~~r~~~~~dva~~~~~L~s  234 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTP-------EIERAMLKHTPLGRLGEAQDIANAALFLCS  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCH-------HHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCH-------HHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            599999888764       479999999999987643221100       000011111222356789999999999997


Q ss_pred             CCc--CCCceEEEcCCCcccc
Q 039623          202 GPR--TLNKTLYIRPPGNVYS  220 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~~~~~t  220 (292)
                      ...  ..|+.+++.|.. ..+
T Consensus       235 ~~~~~itG~~i~vdgG~-~~~  254 (256)
T 3gaf_A          235 PAAAWISGQVLTVSGGG-VQE  254 (256)
T ss_dssp             GGGTTCCSCEEEESTTS-CCC
T ss_pred             CcccCccCCEEEECCCc-ccc
Confidence            543  247788887543 443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.80  E-value=1.4e-18  Score=144.37  Aligned_cols=202  Identities=11%  Similarity=0.092  Sum_probs=127.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc-hhhH-hhhh---cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVK-GKLI-EIFK---NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~-~~~~---~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++ .+.+ +.+.   ..++.++.+|++|++++.++++    
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS-----CHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCC-----cchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     443 3222 2221   3468899999999999888775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++||+||...                   +.++    +.+++.+++.+ ..++|+ |+.......     .+..
T Consensus        80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~  153 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVAS-----ANKS  153 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCH
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCC-----CCCc
Confidence               6999999999643                   2333    34444445556 678876 443222111     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCC--CCC-CCceeec-CCCcceEEeeccchHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAP--APP-REKVTIF-GDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~~~~i~v~D~a~  194 (292)
                      .|..+|..++.+.+.       .+++++.++||++.+............  ... ......+ ........+.+++|+|+
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~  233 (260)
T 1x1t_A          154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHH
Confidence            455599999888763       479999999999987653321110000  000 0000000 00011235789999999


Q ss_pred             HHHHhhcCCc--CCCceEEEcC
Q 039623          195 YTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +++.++....  ..|+.+++.|
T Consensus       234 ~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          234 TAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhChhhcCCCCCEEEECC
Confidence            9999997542  3467777764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.80  E-value=2.9e-18  Score=142.36  Aligned_cols=192  Identities=14%  Similarity=0.067  Sum_probs=127.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.     ++.  .+.+...++.++.+|++|++++.++++       ++
T Consensus        28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (260)
T 3gem_A           28 APILITGASQRVGLHCALRLLEHGHRVIISYRTE-----HAS--VTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSL  100 (260)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC-----CHH--HHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh-----HHH--HHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999999983     332  123334468999999999999888775       58


Q ss_pred             CEEEEcCcCCC------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           75 DVVISTVSRGQ------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        75 d~vi~~a~~~~------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      |++||+||...                  +.++..+++++    ++.+ ..++|. |+.......     .+...|..+|
T Consensus       101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~asK  174 (260)
T 3gem_A          101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGS-----SKHIAYCATK  174 (260)
T ss_dssp             SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCC-----SSCHHHHHHH
T ss_pred             CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC-----CCcHhHHHHH
Confidence            99999999653                  34445555554    3344 567776 443221111     1234455599


Q ss_pred             HHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          132 IKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       132 ~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      ..++.+.+.      .++++..++||.+......... .         ............+..++|+|++++.+++....
T Consensus       175 aa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~-~---------~~~~~~~~p~~r~~~~edva~~v~~L~~~~~i  244 (260)
T 3gem_A          175 AGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAA-Y---------RANALAKSALGIEPGAEVIYQSLRYLLDSTYV  244 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------------CCSCCCCCTHHHHHHHHHHHHCSSC
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHH-H---------HHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCC
Confidence            999888764      2588899999988654221100 0         00000011122345789999999999976555


Q ss_pred             CCceEEEcCCC
Q 039623          206 LNKTLYIRPPG  216 (292)
Q Consensus       206 ~~~~~~~~~~~  216 (292)
                      .|+.+++.|..
T Consensus       245 tG~~i~vdGG~  255 (260)
T 3gem_A          245 TGTTLTVNGGR  255 (260)
T ss_dssp             CSCEEEESTTT
T ss_pred             CCCEEEECCCc
Confidence            67888887543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.80  E-value=1.4e-18  Score=141.72  Aligned_cols=178  Identities=14%  Similarity=0.149  Sum_probs=120.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc----CCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ----VDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~----~d~   76 (292)
                      ||+|+||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++.    .|+
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~   75 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRS-----ESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPST   75 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence            8899999999999999999999999999999998     5555444443356789999999999999999875    399


Q ss_pred             EEEcCcCCC-------------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           77 VISTVSRGQ-------------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        77 vi~~a~~~~-------------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      +||+||...                   +.++..+++++.+.-  +-.++|. |+.......     .....|..+|..+
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~~Y~asKaa~  150 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK-----AQESTYCAVKWAV  150 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC-----TTCHHHHHHHHHH
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC-----CCCchhHHHHHHH
Confidence            999999653                   445556666655432  0126665 432222111     1234455599999


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      +.+.+.       .|+++..++||.+..........                ......+.+++|+|++++.++.++.
T Consensus       151 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          151 KGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------------SLDTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HHHHHHHHHHTTTSSCEEEEEEECCC--------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------------CCCcccCCCHHHHHHHHHHHHhCcC
Confidence            888764       37899999999887654322110                0113467899999999999997543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.80  E-value=4.1e-19  Score=147.26  Aligned_cols=197  Identities=15%  Similarity=0.117  Sum_probs=129.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+..    ++.+ ..+.+.  ..++.++.+|++|++++.++++      
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAP----ANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCC----TTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCch----hhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999721    1221 112221  3468899999999999988887      


Q ss_pred             -cCCEEEEcCcC-CC-------------------chhHHHHHHHHH----HhC----Ccceeec-cC-CCCCCccCCccC
Q 039623           73 -QVDVVISTVSR-GQ-------------------IPEQAKIIAAVK----EAG----NVKRFLP-SE-FGNDVDRSQNVV  121 (292)
Q Consensus        73 -~~d~vi~~a~~-~~-------------------~~~~~~l~~a~~----~~~----~~~~~i~-s~-~g~~~~~~~~~~  121 (292)
                       ++|+|||+||. ..                   +.++..+++++.    +.+    ...++|+ |+ ++....     .
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~  158 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG-----G  158 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-----C
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-----C
Confidence             79999999996 21                   334444444432    211    1156665 33 321101     1


Q ss_pred             CCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          122 EPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       122 ~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      .+...|..+|..++.+.+.       .+++++++||+.+.+........        ........+.....+++++|+|+
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~  230 (258)
T 3afn_B          159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQ--------DVRDRISNGIPMGRFGTAEEMAP  230 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCH--------HHHHHHHTTCTTCSCBCGGGTHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCH--------HHHHHHhccCCCCcCCCHHHHHH
Confidence            2334555599999988764       38999999999998764322100        00000111122346789999999


Q ss_pred             HHHHhhcCCc---CCCceEEEcCC
Q 039623          195 YTINSIDGPR---TLNKTLYIRPP  215 (292)
Q Consensus       195 ~~~~~l~~~~---~~~~~~~~~~~  215 (292)
                      +++.++.++.   ..|+.|++.|.
T Consensus       231 ~~~~l~~~~~~~~~~G~~~~v~gg  254 (258)
T 3afn_B          231 AFLFFASHLASGYITGQVLDINGG  254 (258)
T ss_dssp             HHHHHHCHHHHTTCCSEEEEESTT
T ss_pred             HHHHHhCcchhccccCCEEeECCC
Confidence            9999997642   24677777643

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.80  E-value=2.4e-18  Score=147.22  Aligned_cols=215  Identities=16%  Similarity=0.114  Sum_probs=133.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++.+|+....+.++.+.+...   ...++..+.+|++|.+++.++++      
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~   85 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED   85 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            469999999999999999999999999999997544334444433322   24578999999999999988886      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++|||||...                   +.++.++++++    ++.+ ..++|. |+.+.....    ......|
T Consensus        86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~----~~~~~~Y  160 (324)
T 3u9l_A           86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGT----PPYLAPY  160 (324)
T ss_dssp             SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----CSSCHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCC----CCcchhH
Confidence             7999999999643                   45566666665    6666 677776 443222111    0113345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCC-cee------ecCCCcc--------eEE
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPRE-KVT------IFGDGNA--------GAV  185 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~--------~~~  185 (292)
                      ..+|..++.+.+.       .|+++++|+||.+.+..........   .... ...      ..+..+.        ..+
T Consensus       161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (324)
T 3u9l_A          161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGV---PDDHARQAEYEAGPNAGLGEEIKKAFAAIVPP  237 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBC---CSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCC---chHHHHHHhhccccccCCHHHHHHHHHHhcCC
Confidence            5699999988764       4899999999998643211100000   0000 000      0000000        001


Q ss_pred             eeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHH
Q 039623          186 YNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELV  225 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~  225 (292)
                      ..+++|+|++++.++..+........+.|+. ..++..+.
T Consensus       238 ~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~-~~~~~~~~  276 (324)
T 3u9l_A          238 DADVSLVADAIVRVVGTASGKRPFRVHVDPA-EDGADVGF  276 (324)
T ss_dssp             TCCTHHHHHHHHHHHTSCTTCCCSEEEECTT-CCSHHHHH
T ss_pred             CCCHHHHHHHHHHHhcCCCCCCCeEEEeCCc-chHHHHHH
Confidence            2578999999999998764323334455554 44533333

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.79  E-value=1.3e-18  Score=144.26  Aligned_cols=202  Identities=15%  Similarity=0.157  Sum_probs=130.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   77 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     5444322 2222  3468899999999999888876      


Q ss_pred             -cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.+    ++.+++.+++.+...++|+ |+.......     +....|
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y  152 (256)
T 1geg_A           78 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----PELAVY  152 (256)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTBHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----CCchhH
Confidence             7999999998643                   223    3444444444431356765 443222111     122345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccc----c-CCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLA----Q-IGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ..+|..++.+.+.       .|++++.++||++.+.......    . ...  ........+........+.+++|+|++
T Consensus       153 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~~  230 (256)
T 1geg_A          153 SSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGK--PLGYGTAEFAKRITLGRLSEPEDVAAC  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTC--CTTHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccC--ChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            5599998888764       4899999999999876432210    0 000  000000000011112246899999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++..+.  ..|+.+.+.|.
T Consensus       231 v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          231 VSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHhCccccCCCCCEEEeCCC
Confidence            999997642  34677777653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.79  E-value=4.9e-19  Score=145.63  Aligned_cols=195  Identities=13%  Similarity=0.080  Sum_probs=129.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+|+||||+|+||++++++|+++|++|+++ .|+     +++.+.+. .+.  ..++.++.+|++|++++.++++     
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS-----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA   76 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            679999999999999999999999999985 676     44433221 221  3468899999999999988876     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+|||+||...                   +.++.++++++.+    .+ ..++|+ |+.......     .+...
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~  150 (244)
T 1edo_A           77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGN-----IGQAN  150 (244)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTCHH
T ss_pred             cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCC-----CCCcc
Confidence              6899999999643                   3455555555543    45 678876 443211111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .+++++++||+.+.+.........        .............+++++|+|++++.+
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l  222 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED--------MEKKILGTIPLGRTGQPENVAGLVEFL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH--------HHHHHHTSCTTCSCBCHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChH--------HHHHHhhcCCCCCCCCHHHHHHHHHHH
Confidence            55599998877763       479999999999987643221100        000000001123468999999999999


Q ss_pred             hcCCc---CCCceEEEcCC
Q 039623          200 IDGPR---TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~---~~~~~~~~~~~  215 (292)
                      +.++.   ..|+.+++.|.
T Consensus       223 ~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          223 ALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTT
T ss_pred             hCCCccCCcCCCEEEeCCC
Confidence            85432   24677777643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.79  E-value=1.3e-18  Score=145.15  Aligned_cols=196  Identities=12%  Similarity=0.135  Sum_probs=130.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+   ....+.++.+|++|++++.++++     
T Consensus        22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN-----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     54443222 11   14568889999999998888775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCC-CCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFG-NDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g-~~~~~~~~~~~~~~  125 (292)
                        ++|++||+||...                   +.++..+++++    ++.+ .+++|+ |+.. .....     .+..
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----~~~~  170 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM-----PNIS  170 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS-----SSCH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCC-----CCCh
Confidence              6899999999643                   34444555544    4444 577876 4433 22111     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++++++||++.+.........      ......+........+.+++|+|++++.
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~p~dvA~~v~~  244 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD------PEKLDYMLKRIPLGRTGVPEDLKGVAVF  244 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC------HHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC------hHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence            455599999988764       489999999999976643221100      0000000000011246789999999999


Q ss_pred             hhcCCc--CCCceEEEcC
Q 039623          199 SIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~  214 (292)
                      ++....  ..|+.+.+.|
T Consensus       245 l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          245 LASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HcCccccCCcCCeEEECC
Confidence            997642  2467777764

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.79  E-value=5.5e-19  Score=145.09  Aligned_cols=188  Identities=13%  Similarity=0.100  Sum_probs=130.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc------cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK------QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d   75 (292)
                      |+|+||||+|+||++++++|+++|++|++++|+..              ...+.++.+|++|++++.++++      ++|
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   68 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF   68 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--------------ccceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence            67999999999999999999999999999999842              1245889999999999988887      789


Q ss_pred             EEEEcCcCCC-----------------------chhHHHHHHHHHHhC---------Ccceeec-cCCCCCCccCCccCC
Q 039623           76 VVISTVSRGQ-----------------------IPEQAKIIAAVKEAG---------NVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        76 ~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~---------~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                      ++||+||...                       +.++.++++++.+.-         ...++|+ |+......     ..
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~  143 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-----QI  143 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-----CT
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-----CC
Confidence            9999998632                       445667777776542         0126776 44321111     11


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce-EEeeccchHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG-AVYNKEDDIAT  194 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~  194 (292)
                      +...|..+|..++.+.+.       .+++++++|||.+.+..........        .......... ..+++++|+|+
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~  215 (242)
T 1uay_A          144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA--------KASLAAQVPFPPRLGRPEEYAA  215 (242)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH--------HHHHHTTCCSSCSCCCHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhH--------HHHHHhhCCCcccCCCHHHHHH
Confidence            234455599998887763       3899999999999876432211100        0000000001 24678999999


Q ss_pred             HHHHhhcCCcCCCceEEEcCCC
Q 039623          195 YTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      +++.++.++...|+.+++.|..
T Consensus       216 ~~~~l~~~~~~~G~~~~v~gG~  237 (242)
T 1uay_A          216 LVLHILENPMLNGEVVRLDGAL  237 (242)
T ss_dssp             HHHHHHHCTTCCSCEEEESTTC
T ss_pred             HHHHHhcCCCCCCcEEEEcCCe
Confidence            9999998754567788887543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.79  E-value=2.2e-18  Score=143.33  Aligned_cols=196  Identities=14%  Similarity=0.051  Sum_probs=132.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh---cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK---NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~---~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.   ..++.++.+|++|++++.++++     
T Consensus        11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A           11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRS-----TADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     5544322 2222   2468999999999999888775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        ++|++||+||...                   +.++..++++    +++.+ ..++|. |+ .+.....     ++..
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----~~~~  159 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGY-----PGWS  159 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCC-----TTCH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC-----CCCh
Confidence              7999999999653                   3344444444    44446 577776 44 3321221     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++..++||.+.+........        ..............+.+++|+|++++.
T Consensus       160 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--------~~~~~~~~~~p~~r~~~p~dva~~v~~  231 (262)
T 3pk0_A          160 HYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE--------EYIASMARSIPAGALGTPEDIGHLAAF  231 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH--------HHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            455599999988774       58999999999998753221100        000000011112245788999999999


Q ss_pred             hhcCCc--CCCceEEEcCCC
Q 039623          199 SIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~~  216 (292)
                      ++....  ..|+.+.+.|..
T Consensus       232 L~s~~~~~itG~~i~vdGG~  251 (262)
T 3pk0_A          232 LATKEAGYITGQAIAVDGGQ  251 (262)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCccccCCcCCEEEECCCe
Confidence            997643  347788887543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.79  E-value=3.1e-18  Score=145.26  Aligned_cols=193  Identities=16%  Similarity=0.127  Sum_probs=123.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||++++++|+++|++|++++|+     .++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDVD-----QPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            469999999999999999999999999999998     5554332 2222  3468999999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++|||||...                   +.++..+++++    ++.+...++|. |+.......     .....|
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y  181 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-----AGLGTY  181 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----TTBHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----CCchHH
Confidence             6899999999653                   34455555554    44432356665 443322221     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCC--CCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGA--PAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      ..+|..++.+.+.       .|++++.++||.+.+...........  ......+...++.......+++++|+|++++.
T Consensus       182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~  261 (301)
T 3tjr_A          182 GVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTAD  261 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHH
Confidence            5599998888763       47999999999998764432211100  00111112222333344568999999999999


Q ss_pred             hhcCCc
Q 039623          199 SIDGPR  204 (292)
Q Consensus       199 ~l~~~~  204 (292)
                      +++.++
T Consensus       262 ~l~~~~  267 (301)
T 3tjr_A          262 AILANR  267 (301)
T ss_dssp             HHHHTC
T ss_pred             HHhcCC
Confidence            998753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.79  E-value=4e-18  Score=140.21  Aligned_cols=185  Identities=14%  Similarity=0.142  Sum_probs=128.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-------CEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-------PTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      |+|+||||+|+||+++++.|+++|+       +|++++|+     +++.+.+.. +.  ..++.++.+|++|++++.+++
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRLT   77 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC-----HHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHH
Confidence            5799999999999999999999998       89999997     444433322 21  345889999999999988887


Q ss_pred             c-------cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCcc
Q 039623           72 K-------QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        72 ~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                      +       ++|+|||+||...                   +.++.++++++    ++.+ ..++|+ |+.......    
T Consensus        78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----  152 (244)
T 2bd0_A           78 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF----  152 (244)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----
T ss_pred             HHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCC----
Confidence            6       6999999999643                   34555555555    4455 678876 443222111    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                       .+...|..+|..++.+.+.       .+++++++|||.+.+.......        ...         ...+++++|+|
T Consensus       153 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~~---------~~~~~~~~dva  214 (244)
T 2bd0_A          153 -RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD--------DEM---------QALMMMPEDIA  214 (244)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC--------STT---------GGGSBCHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc--------ccc---------cccCCCHHHHH
Confidence             1234455599999887753       5799999999999876432210        000         12578999999


Q ss_pred             HHHHHhhcCCcC--CCceEEEcC
Q 039623          194 TYTINSIDGPRT--LNKTLYIRP  214 (292)
Q Consensus       194 ~~~~~~l~~~~~--~~~~~~~~~  214 (292)
                      ++++.++..+..  .++++...+
T Consensus       215 ~~~~~l~~~~~~~~~g~~~~~~~  237 (244)
T 2bd0_A          215 APVVQAYLQPSRTVVEEIILRPT  237 (244)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHHHhCCccccchheEEecc
Confidence            999999986532  344444443

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.79  E-value=6.1e-18  Score=140.97  Aligned_cols=195  Identities=12%  Similarity=0.080  Sum_probs=128.5

Q ss_pred             ceEEEEccCC-cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh---hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTG-YIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF---KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+| .||++++++|+++|++|++++|+     .++.+.. +.+   ...++.++.+|++|.+++.++++    
T Consensus        23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYH-----ERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            5799999998 59999999999999999999998     4443322 222   23579999999999999888775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cC-CCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SE-FGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~-~g~~~~~~~~~~~~~  124 (292)
                         ++|++||+||...                   +.++.++++++.+.    +...++|+ |+ .+....      .+.
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------~~~  171 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ------HSQ  171 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC------TTC
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC------CCC
Confidence               5799999999643                   44555666665543    11456665 43 332211      123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .|+++..++||.+.+.........       .....+........+.+++|+|++++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~dva~~i~  244 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS-------ELLDRLASDEAFGRAAEPWEVAATIA  244 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------------CCTTSSCCCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH-------HHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            4455599999888763       579999999999887643322111       11111112222345678999999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..|+.+++.|
T Consensus       245 ~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          245 FLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESS
T ss_pred             HHcCccccCccCCEEEEcC
Confidence            9997642  3467777764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.79  E-value=1.6e-18  Score=146.41  Aligned_cols=198  Identities=14%  Similarity=0.032  Sum_probs=133.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      ++++||||+|+||++++++|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++   ++|++|
T Consensus        17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           17 RTVVITGANSGLGAVTARELARRGATVIMAVRD-----TRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            579999999999999999999999999999998     555544333335578999999999999999987   579999


Q ss_pred             EcCcCCC-----------------chhHHHHHHHHHHhCCcceeec-cCCCCCCc-----cC---CccCCCCcchHHHHH
Q 039623           79 STVSRGQ-----------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVD-----RS---QNVVEPAKSAYADKI  132 (292)
Q Consensus        79 ~~a~~~~-----------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~-----~~---~~~~~~~~~~~~~K~  132 (292)
                      |+||...                 +.++..+++++.+.. .+++|+ |+......     ..   ..+..+...|..+|.
T Consensus        92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A           92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccCCCCcchHHHHHH
Confidence            9999643                 668888999998876 678876 33211111     00   112223334555999


Q ss_pred             HHHHHHHH-------cC--ccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          133 KIRRAIEA-------EG--IQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       133 ~~e~~~~~-------~~--~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      .++.+.+.       .+  +++..++||.+.+..........     ...   .......+-..+++|+|++++.++.++
T Consensus       171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~A~~~~~l~~~~  242 (291)
T 3rd5_A          171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL-----GDA---LMSAATRVVATDADFGARQTLYAASQD  242 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------------CHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH-----HHH---HHHHHHHHHhCCHHHHHHHHHHHHcCC
Confidence            98887763       35  88999999999776543221110     000   000011122346899999999999886


Q ss_pred             cCCCceEEEc
Q 039623          204 RTLNKTLYIR  213 (292)
Q Consensus       204 ~~~~~~~~~~  213 (292)
                      ...|+.+.+.
T Consensus       243 ~~~G~~~~vd  252 (291)
T 3rd5_A          243 LPGDSFVGPR  252 (291)
T ss_dssp             CCTTCEEEET
T ss_pred             CCCCceeCCc
Confidence            4456666554

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.79  E-value=9.7e-18  Score=137.13  Aligned_cols=176  Identities=19%  Similarity=0.169  Sum_probs=123.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-h---hhcCCcEEEECCCCCHHHHHHHHc----
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-I---FKNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |++++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .   ....++.++.+|++|++++.++++    
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARS-----VDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE   76 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999998     55443322 1   224678999999999999988876    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++||+||...                   +.++..+++++.    +.+ -..++. |+.+....      +...
T Consensus        77 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~------~~~~  149 (235)
T 3l77_A           77 RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-GLALVTTSDVSARLI------PYGG  149 (235)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSCC------TTCH
T ss_pred             hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEecchhcccC------CCcc
Confidence               6899999999753                   345555555553    333 233333 33332211      1123


Q ss_pred             chHHHHHHHHHHHHH-----cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          126 SAYADKIKIRRAIEA-----EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-----~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .|..+|..++.+.+.     .++++..++||.+.+........       .         .....+++++|+|++++.++
T Consensus       150 ~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~-------~---------~~~~~~~~p~dva~~v~~l~  213 (235)
T 3l77_A          150 GYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG-------K---------PKEKGYLKPDEIAEAVRCLL  213 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC-------C---------CGGGTCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC-------c---------ccccCCCCHHHHHHHHHHHH
Confidence            455599999888775     48999999999987654322110       0         00114578999999999999


Q ss_pred             cCCc
Q 039623          201 DGPR  204 (292)
Q Consensus       201 ~~~~  204 (292)
                      ..+.
T Consensus       214 ~~~~  217 (235)
T 3l77_A          214 KLPK  217 (235)
T ss_dssp             TSCT
T ss_pred             cCCC
Confidence            8764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=9.2e-19  Score=144.27  Aligned_cols=200  Identities=14%  Similarity=0.112  Sum_probs=130.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+.+..  ..++.++.+|++|++++.++++   ++|++|
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQELEK--YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHGGGGG--STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHh--ccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            579999999999999999999999999999998     555443331  2378899999999998887754   689999


Q ss_pred             EcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHH
Q 039623           79 STVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKI  134 (292)
Q Consensus        79 ~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~  134 (292)
                      |+||...                   +.++..++++    +++.+ ..++|+ |+.......    ..+...|..+|..+
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~~Y~~sK~a~  154 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG----VVNRCVYSTTKAAV  154 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC----CTTBHHHHHHHHHH
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCC----CCCCccHHHHHHHH
Confidence            9999643                   2334444444    44555 678876 443222211    00233455599999


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--C
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--T  205 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~  205 (292)
                      +.+.+.       .|++++++||+.+.+...........  ........+........+.+++|+|++++.++..+.  .
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~  232 (246)
T 2ag5_A          155 IGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG--NPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV  232 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSS--SHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhccc--CcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCC
Confidence            888774       38999999999998764322110000  000000000000011246789999999999997643  2


Q ss_pred             CCceEEEcCC
Q 039623          206 LNKTLYIRPP  215 (292)
Q Consensus       206 ~~~~~~~~~~  215 (292)
                      .|+.+.+.|.
T Consensus       233 tG~~i~vdgG  242 (246)
T 2ag5_A          233 TGNPVIIDGG  242 (246)
T ss_dssp             CSCEEEECTT
T ss_pred             CCCEEEECCC
Confidence            4677777643

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.79  E-value=7.4e-19  Score=147.37  Aligned_cols=203  Identities=16%  Similarity=0.132  Sum_probs=132.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARG-----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999998     4444322 2222  3468899999999999888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH------HhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK------EAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~------~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                       ++|++||+||...                   +.++.++++++.      +.+ ..++|+ |+.......     .+..
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~  171 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGV-----VHAA  171 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCC-----TTCH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCC-----CCCc
Confidence             6899999999643                   345555566644      335 577876 443222111     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccC--CCCCCC-CCceeecCCCcceEEeeccchHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQI--GAPAPP-REKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      .|..+|..++.+.+.       .|+++++++||++.+.........  ...... ......+........+++++|+|++
T Consensus       172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~  251 (277)
T 2rhc_B          172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            455599999888764       378999999999987643221000  000000 0000000000112357899999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++..+.  ..|+.+++.|.
T Consensus       252 v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          252 VAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhcCCCCcEEEECCC
Confidence            999997642  34677887654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.79  E-value=3.4e-18  Score=139.86  Aligned_cols=174  Identities=15%  Similarity=0.200  Sum_probs=120.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++       .+
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR-----YQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998     555544433334469999999999998888775       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++.    +.+  .++|. |+.......     .....|..+
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~-----~~~~~Y~as  151 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGK-----ANESLYCAS  151 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSC-----SSHHHHHHH
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCC-----CCCcHHHHH
Confidence            99999999743                   344555555543    333  36665 443222221     122344459


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||.+..........                 .....+.+++|+|++++.++.++
T Consensus       152 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------------~~~~~~~~pedvA~~v~~l~~~~  214 (235)
T 3l6e_A          152 KWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------------VDPSGFMTPEDAAAYMLDALEAR  214 (235)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------CBCHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------------CCCcCCCCHHHHHHHHHHHHhCC
Confidence            9999888774       47899999999887654321100                 01125689999999999999865


Q ss_pred             c
Q 039623          204 R  204 (292)
Q Consensus       204 ~  204 (292)
                      .
T Consensus       215 ~  215 (235)
T 3l6e_A          215 S  215 (235)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=7.6e-18  Score=138.80  Aligned_cols=175  Identities=14%  Similarity=0.100  Sum_probs=116.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|+||+++++.|+++|  ++|++++|+     .++.+.+..+...++.++.+|++|.+++.++++       
T Consensus         4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD-----VEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS-----GGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC-----HHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999  999999998     444444333334578999999999999888876       


Q ss_pred             --cCCEEEEcCcCCC--------------------chhHHHHHHHHHH----h------CC----cceeec-cC-CCCCC
Q 039623           73 --QVDVVISTVSRGQ--------------------IPEQAKIIAAVKE----A------GN----VKRFLP-SE-FGNDV  114 (292)
Q Consensus        73 --~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~----~------~~----~~~~i~-s~-~g~~~  114 (292)
                        ++|+|||+||...                    +.++..+++++.+    .      +.    ..++|+ |+ .+...
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              7999999998532                    3344555555433    2      20    356665 33 22211


Q ss_pred             ccC-CccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEe
Q 039623          115 DRS-QNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVY  186 (292)
Q Consensus       115 ~~~-~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (292)
                      ... ..+..+...|..+|..++.+++.       .++++++++||++.+....           .            ..+
T Consensus       159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~------------~~~  215 (250)
T 1yo6_A          159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-----------K------------NAA  215 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC-----------C------------CCC
Confidence            110 11112334455599999888764       3799999999988655311           0            135


Q ss_pred             eccchHHHHHHHhhcCCc
Q 039623          187 NKEDDIATYTINSIDGPR  204 (292)
Q Consensus       187 i~v~D~a~~~~~~l~~~~  204 (292)
                      ++.+|+|+.++.++..+.
T Consensus       216 ~~~~~~a~~~~~~~~~~~  233 (250)
T 1yo6_A          216 LTVEQSTAELISSFNKLD  233 (250)
T ss_dssp             ---HHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHhccc
Confidence            789999999999998754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.79  E-value=2.8e-18  Score=144.01  Aligned_cols=203  Identities=11%  Similarity=0.017  Sum_probs=134.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +.  ..++.++.+|++|++++.++++      
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARN-----GNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            469999999999999999999999999999998     554433322 22  3468899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                       ++|++|||||...                    +.++..+++++    ++.+ -.++|+ |+ .+.....     ....
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----~~~~  157 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGF-----AGVA  157 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCC-----TTCH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCC-----CCch
Confidence             6899999999642                    33444455544    4444 457776 44 3321211     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++..++||.+.+.........    ........+........+.+++|+|++++.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  233 (280)
T 3tox_A          158 PYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG----AAPETRGFVEGLHALKRIARPEEIAEAALY  233 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT----CCTHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc----cCHHHHHHHhccCccCCCcCHHHHHHHHHH
Confidence            455599999888764       479999999999987643221100    000001111111223356789999999999


Q ss_pred             hhcCCc--CCCceEEEcCCCcccc
Q 039623          199 SIDGPR--TLNKTLYIRPPGNVYS  220 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~~~~~t  220 (292)
                      ++.+..  ..|+.+++.|.. .++
T Consensus       234 L~s~~a~~itG~~i~vdGG~-~~~  256 (280)
T 3tox_A          234 LASDGASFVTGAALLADGGA-SVT  256 (280)
T ss_dssp             HHSGGGTTCCSCEEEESTTG-GGC
T ss_pred             HhCccccCCcCcEEEECCCc-ccc
Confidence            998643  347788887543 443

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.79  E-value=6.7e-18  Score=141.08  Aligned_cols=185  Identities=12%  Similarity=0.026  Sum_probs=119.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .++.+.+......++.++.+|++|++++.++++       ++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR-----LDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998     555544433335689999999999999888876       79


Q ss_pred             CEEEEcCcCCC--------------------chhHHHHHH----HHHHhCC-cceeec-cCCCCCCccCCccCCCCcchH
Q 039623           75 DVVISTVSRGQ--------------------IPEQAKIIA----AVKEAGN-VKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        75 d~vi~~a~~~~--------------------~~~~~~l~~----a~~~~~~-~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      |++|||||...                    +.++..+++    .+++.+. -.++|. |+.......     .+...|.
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----~~~~~Y~  178 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-----PYSAPYT  178 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC-----TTCHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC-----CCchHHH
Confidence            99999999742                    334444444    4444320 246765 443222221     1234455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .++++..++||.+.+.........       ..  ..........+.+++|+|++++.++.
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------~~--~~~~~~~~~~~~~pedvA~~v~fL~s  249 (272)
T 4dyv_A          179 ATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-------VP--QADLSIKVEPVMDVAHVASAVVYMAS  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------------CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-------ch--hhhhcccccCCCCHHHHHHHHHHHhC
Confidence            599999888764       478999999999887643322111       00  00011123457899999999999998


Q ss_pred             CCcC
Q 039623          202 GPRT  205 (292)
Q Consensus       202 ~~~~  205 (292)
                      .+..
T Consensus       250 ~~~~  253 (272)
T 4dyv_A          250 LPLD  253 (272)
T ss_dssp             SCTT
T ss_pred             CCCc
Confidence            7643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.79  E-value=1.4e-18  Score=146.36  Aligned_cols=194  Identities=11%  Similarity=0.117  Sum_probs=127.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999998887     4443322 2222  3468899999999999888874      


Q ss_pred             -cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|+|||+||...                   +.+    ++.+++.+++.+ .+++|+ |+.......     .+...|
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y  193 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGN-----VGQANY  193 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTCHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCC-----CCCchH
Confidence             6899999999643                   334    444444445566 678876 443211111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .++++++++||.+.+.........        .............+++++|+|++++.++
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dvA~~~~~l~  265 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ--------IKKNIISNIPAGRMGTPEEVANLACFLS  265 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH--------HHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHH--------HHHHHHhhCCCCCCCCHHHHHHHHHHHh
Confidence            5599998887764       489999999999976643221100        0000000011124689999999999999


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      .++.  ..|+.+++.|
T Consensus       266 ~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          266 SDKSGYINGRVFVIDG  281 (285)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CCCcCCCCCCEEEeCC
Confidence            7643  2467777764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=4.8e-18  Score=144.24  Aligned_cols=198  Identities=11%  Similarity=0.092  Sum_probs=131.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh-------hcCCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF-------KNLGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-------~~~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      ++|+||||+|+||++++++|+++|++|++++|+     .++.+.+ +.+       ...++.++.+|++|.+++.++++ 
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRK-----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            579999999999999999999999999999998     4443322 222       13468999999999999888876 


Q ss_pred             ------cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCccCC
Q 039623           73 ------QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 ------~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                            ++|+|||+||...                   +.++.++++++.+.    + ..++|+ |+.. ....     .
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~-----~  166 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGF-----P  166 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCC-----T
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCC-----C
Confidence                  4899999999532                   55677777776552    2 356765 4443 2111     1


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccc-cccccCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFL-PTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      ....|..+|..++.+.+.       .|++++++|||.+.+... ....... .........    ......+.+++|+|+
T Consensus       167 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~----~~p~~~~~~~~dvA~  241 (303)
T 1yxm_A          167 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG-QSFFEGSFQ----KIPAKRIGVPEEVSS  241 (303)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG-GGGGTTGGG----GSTTSSCBCTHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccc-hHHHHHHHh----cCcccCCCCHHHHHH
Confidence            123444499988877763       489999999999987631 1111000 000000000    011124689999999


Q ss_pred             HHHHhhcCCc--CCCceEEEcCCC
Q 039623          195 YTINSIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~~~  216 (292)
                      +++.++....  ..|+.+++.|..
T Consensus       242 ~i~~l~~~~~~~~~G~~~~v~gG~  265 (303)
T 1yxm_A          242 VVCFLLSPAASFITGQSVDVDGGR  265 (303)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCcccccCCCcEEEECCCe
Confidence            9999997543  346777777543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.78  E-value=5.2e-18  Score=140.21  Aligned_cols=183  Identities=13%  Similarity=0.079  Sum_probs=115.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +.  ..++.++.+|++|.+++.++++      
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRN-----GEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA   82 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESS-----GGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence            469999999999999999999999999999998     555433322 22  3468999999999999988886      


Q ss_pred             cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|++||+||...                   +.+    ++.++..+++.+ ..++|. |+.......     .....|.
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~  156 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGG-----SGFAAFA  156 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCC-----TTCHHHH
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCC-----CCCccHH
Confidence            5799999999743                   223    344455556666 567776 432221111     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccE-EEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 ADKIKIRRAIEA-------EGIQY-TYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~-~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .+|..++.+.+.       .|+++ ..+.||.+.+.........        ............ +.+++|+|++++.++
T Consensus       157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~-~~~pedvA~~~~~l~  227 (252)
T 3h7a_A          157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ--------MFGKDALANPDL-LMPPAAVAGAYWQLY  227 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------------CCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchh--------hhhhhhhcCCcc-CCCHHHHHHHHHHHH
Confidence            599998888764       47888 7899999876644322111        001111112223 789999999999999


Q ss_pred             cCCc
Q 039623          201 DGPR  204 (292)
Q Consensus       201 ~~~~  204 (292)
                      .++.
T Consensus       228 s~~~  231 (252)
T 3h7a_A          228 QQPK  231 (252)
T ss_dssp             HCCG
T ss_pred             hCch
Confidence            8654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.78  E-value=4.5e-18  Score=141.15  Aligned_cols=201  Identities=14%  Similarity=0.120  Sum_probs=130.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc--hhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVK--GKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++  .+.+ +.+.  ..++.++.+|++|++++.++++    
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLP-----QQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAE   77 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECG-----GGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----cchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            679999999999999999999999999999998     444  2222 2222  3468899999999998888775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCc-ceeec-cCCCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNV-KRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~-~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                         ++|++||+||...                   +.++..++++    +++.+ . .++|+ |+.......     ++.
T Consensus        78 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~-----~~~  151 (258)
T 3a28_C           78 KLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGF-----PIL  151 (258)
T ss_dssp             HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCC-----TTC
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCC-----CCc
Confidence               6999999999643                   2334444444    44456 5 67776 443222111     123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccC-----CCCCCCCCceeecCCCcceEEeeccchH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQI-----GAPAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                      ..|..+|..++.+.+.       .++++++++||++.+.........     . . ........+........+.+++|+
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~p~~r~~~p~dv  229 (258)
T 3a28_C          152 SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKING-K-PIGENFKEYSSSIALGRPSVPEDV  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHC-C-CTTHHHHHHHTTCTTSSCBCHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccC-C-chHHHHHHHHhcCCCCCccCHHHH
Confidence            3455599999887764       489999999999977643221100     0 0 000000000000111246789999


Q ss_pred             HHHHHHhhcCCc--CCCceEEEcCC
Q 039623          193 ATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       193 a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      |++++.++..+.  ..|+.+.+.|.
T Consensus       230 A~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          230 AGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHHhCcccCCCCCCEEEECCC
Confidence            999999997642  34677777654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.78  E-value=2.5e-18  Score=143.82  Aligned_cols=200  Identities=14%  Similarity=0.119  Sum_probs=128.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHH-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAI-------   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~-------   71 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++..+.+|++|++++.+++       
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     4444322 2222  346889999999999888877       


Q ss_pred             -ccCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           72 -KQVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        72 -~~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       .++|++||+||...                   +.++..+++++    ++.+ ..++|+ |+.......     ++...
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~  170 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSAL-----PSVSL  170 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCC-----TTCHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCC-----CCcch
Confidence             46899999999643                   33444555554    4555 677776 443222111     12344


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEeeccchHHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..+|..++.+.+.       .|++++.++||.+.+..........   ..... ............+.+++|+|++++.
T Consensus       171 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  247 (273)
T 1ae1_A          171 YSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN---PHQKEEIDNFIVKTPMGRAGKPQEVSALIAF  247 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcc---cCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            55599999888764       4899999999999876432211000   00000 0000000111246789999999999


Q ss_pred             hhcCCc--CCCceEEEcCC
Q 039623          199 SIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~  215 (292)
                      ++....  ..|+.+++.|.
T Consensus       248 l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          248 LCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCccccCcCCCEEEECCC
Confidence            997542  24777877654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.78  E-value=9.8e-19  Score=145.10  Aligned_cols=197  Identities=11%  Similarity=0.079  Sum_probs=131.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++. .|+     .++.+.+. .+.  ..++.++.+|++|.+++.++++     
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARS-----KKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            469999999999999999999999999987 666     44433222 221  3468999999999999888775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++||+||...                   +.++..+++++    ++.+ ..++|+ |+.+.....     .+...
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~  153 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYL-----ENYTT  153 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBC-----TTCHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCC-----CCcHH
Confidence              5799999998643                   34445555554    4444 567776 443222211     22344


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++..++||.+.+.........      ...............+.+++|+|++++.+
T Consensus       154 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~~~dva~~v~~L  227 (258)
T 3oid_A          154 VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR------EDLLEDARQNTPAGRMVEIKDMVDTVEFL  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH------HHHHHHHHHHCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            55599999988774       479999999999977643322100      00000000111123567899999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +.+..  ..|+.+++.|.
T Consensus       228 ~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          228 VSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             TSSTTTTCCSCEEEESTT
T ss_pred             hCcccCCccCCEEEECCC
Confidence            98653  34778888754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.78  E-value=9.5e-18  Score=140.48  Aligned_cols=196  Identities=12%  Similarity=0.119  Sum_probs=131.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.  ..++.++.+|++|++++.++++      
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARH-----SDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     44443332 222  3478999999999999888876      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cC-CCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++||+||...                   +.++..++++    +++.+.-.++|. |+ .+.....    ..+...
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~----~~~~~~  183 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI----PQQVSH  183 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC----SSCCHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC----CCCcch
Confidence             7999999999754                   3344444444    444441255665 33 3322111    112334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++..++||++.+.........         ...+........+.+++|+|++++.+
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---------~~~~~~~~p~~r~~~pedvA~~v~fL  254 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY---------HALWEPKIPLGRMGRPEELTGLYLYL  254 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG---------HHHHGGGSTTSSCBCGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH---------HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            55599999888764       579999999999987643322110         00001111123467899999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +....  ..|+.+++.|.
T Consensus       255 ~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          255 ASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             cCccccCccCcEEEECcC
Confidence            98643  34677777653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.78  E-value=3.5e-18  Score=142.93  Aligned_cols=197  Identities=13%  Similarity=0.116  Sum_probs=131.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc------c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK------Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------~   73 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     ....+..+.+.  ..++.++.+|++|.+++.++.+      +
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-----DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR  106 (273)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            479999999999999999999999999999976     33333333332  3458899999999988877654      6


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|++||+||...                   +.++..++++    +++.+ ..++|. |+.......     .+...|..
T Consensus       107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~-----~~~~~Y~a  180 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGG-----RNVAAYAA  180 (273)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----SSCHHHHH
T ss_pred             CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCC-----CCChhHHH
Confidence            999999999754                   3344444554    45566 577776 443222221     12344555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..++||.+.+.........      ......+........+.+++|+|++++.++..
T Consensus       181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~  254 (273)
T 3uf0_A          181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD------DERAAEITARIPAGRWATPEDMVGPAVFLASD  254 (273)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS------HHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            99999888764       579999999999987643221100      00000000011123467899999999999986


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      ..  ..|+.+++.|.
T Consensus       255 ~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          255 AASYVHGQVLAVDGG  269 (273)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCCcCCEEEECcC
Confidence            42  34778888753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.78  E-value=1e-18  Score=145.59  Aligned_cols=183  Identities=14%  Similarity=0.148  Sum_probs=126.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.   +.+...++.++.+|++|.+++.++++       ++
T Consensus        17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARR-----VERL---KALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHH---HTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            469999999999999999999999999999998     4444   33334578999999999998888776       68


Q ss_pred             CEEEEcCcCCC-------------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||||...                   +.++    +.++..+++.+ ..++|+ |+.......     .....|..+
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~-----~~~~~Y~as  162 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTF-----PDHAAYCGT  162 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-----TTCHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCC-----CCCchHHHH
Confidence            99999999753                   3333    44555556666 678876 443222211     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCC-CcceEEeeccchHHHHHHHhhcC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGD-GNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      |..++.+.+.       .|+++..++||.+.+.........       .....+.. ......+++++|+|++++.++.+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~  235 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ-------QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQ  235 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCH-------HHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccch-------hhhHHHHhhcccccCCCCHHHHHHHHHHHHcC
Confidence            9998887763       589999999999987654322100       00000000 00122468899999999999987


Q ss_pred             CcC
Q 039623          203 PRT  205 (292)
Q Consensus       203 ~~~  205 (292)
                      +..
T Consensus       236 ~~~  238 (266)
T 3p19_A          236 PQN  238 (266)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.78  E-value=4.4e-18  Score=142.81  Aligned_cols=203  Identities=13%  Similarity=0.123  Sum_probs=135.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ...+.++.+|++|.+++.++++      
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARD-----AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     5544332 2222  3568999999999998887775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHH------hCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE------AGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~------~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                       ++|++||+||...                   +.++..+++++.+      .+ ..++|. |+.......     ....
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~-----~~~~  173 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGV-----MYAA  173 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCC-----TTCH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCC-----CCCh
Confidence             6899999999753                   4556666666544      44 567776 443222221     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCC--C-CCceeecCCCcceEEeeccchHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAP--P-REKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      .|..+|..++.+.+.       .|+++..++||.+.+..............  . ......+........+.+++|+|++
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  253 (279)
T 3sju_A          174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGL  253 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            455599998888763       57999999999997764332211100000  0 0001111112223456789999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++.+..  ..|+.+++.|.
T Consensus       254 v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          254 VGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             HHHHTSSGGGGCCSCEEEESTT
T ss_pred             HHHHhCccccCcCCcEEEECCC
Confidence            999998653  34778888653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.78  E-value=1e-17  Score=138.88  Aligned_cols=200  Identities=13%  Similarity=0.050  Sum_probs=129.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +.  ..++.++.+|++|++++.++++      
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRT-----KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     555433322 21  3468899999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++|||||...                   +.++..+++++    .+.+...++|. |+.......     .....|
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y  156 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----PGVIHS  156 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----TTCHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----CCcHHH
Confidence             6899999999543                   34455555554    23322466775 432211111     123344


Q ss_pred             HHHHHHHHHHHH--------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIE--------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~--------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..++.+.+        ..|+++..++||.+.+.........     ................+.+++|+|++++.+
T Consensus       157 ~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  231 (257)
T 3imf_A          157 AAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI-----SEEMAKRTIQSVPLGRLGTPEEIAGLAYYL  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC------------CCSHHHHTTSTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc-----CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            459999887765        2489999999999876532111000     000000011111223567899999999999


Q ss_pred             hcCCc--CCCceEEEcCCC
Q 039623          200 IDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~~  216 (292)
                      +.+..  ..|+.+.+.|..
T Consensus       232 ~s~~~~~itG~~i~vdGG~  250 (257)
T 3imf_A          232 CSDEAAYINGTCMTMDGGQ  250 (257)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             cCchhcCccCCEEEECCCc
Confidence            97653  247778887543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.77  E-value=1.9e-17  Score=136.56  Aligned_cols=194  Identities=13%  Similarity=0.072  Sum_probs=125.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+.+......++.++.+|++|++++.++++       ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999998     555544333224578999999999999998876       58


Q ss_pred             CEEEEcCcCCC--------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ--------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~--------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++||+||...                    +.++..++++    +++.+ ..++|+ |+.......     .+...|..
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~a  149 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY-----AGGNVYGA  149 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-----TTCHHHHH
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCC-----CCCchHHH
Confidence            99999999641                    3333444444    44555 577776 443222111     12344555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceec-cccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFA-GYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      +|..++.+.+.       .|++++.++||++. ..........     ........   .....+.+++|+|++++.++.
T Consensus       150 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~-----~~~~~~~~---~~~~~~~~p~dvA~~v~~l~s  221 (248)
T 3asu_A          150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG-----DDGKAEKT---YQNTVALTPEDVSEAVWWVST  221 (248)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------------CCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC-----chHHHHHH---HhccCCCCHHHHHHHHHHHhc
Confidence            99999988764       47999999999997 4432111000     00000000   001234689999999999998


Q ss_pred             CCcC-CCceEEEcC
Q 039623          202 GPRT-LNKTLYIRP  214 (292)
Q Consensus       202 ~~~~-~~~~~~~~~  214 (292)
                      .+.. .++.+.+.+
T Consensus       222 ~~~~~~g~~i~v~~  235 (248)
T 3asu_A          222 LPAHVNINTLEMMP  235 (248)
T ss_dssp             SCTTCCCCEEEECC
T ss_pred             CCccceeeEEEEcc
Confidence            6533 355566553

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.77  E-value=3.9e-18  Score=142.89  Aligned_cols=197  Identities=12%  Similarity=0.164  Sum_probs=129.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhc-CCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKN-LGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.. .++.++.+|++|++++.++++       
T Consensus        30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARD-----AEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999999998     4444322 22221 268889999999998888775       


Q ss_pred             cCCEEEEcCcCCC-------------------chhH----HHHHHHHHHhCCc----ceeec-cCCCCCCccCCccCCCC
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQ----AKIIAAVKEAGNV----KRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~----~~l~~a~~~~~~~----~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                      ++|++|||||...                   +.++    +.+++.+++.+ .    .++|+ |+.......     ...
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~-----~~~  178 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAM-----GEQ  178 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCC-----CCS
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCC-----CCC
Confidence            6899999999642                   2333    44455555555 4    67776 443221111     112


Q ss_pred             c-chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          125 K-SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       125 ~-~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      . .|..+|..++.+.+.       .++++++++||++.+.........    . ....... .......+.+++|+|+++
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~-~~~~~~~-~~~p~~r~~~p~dvA~~v  252 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----P-QALEADS-ASIPMGRWGRPEEMAALA  252 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----H-HHHHHHH-HTSTTSSCCCHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----H-HHHHHhh-cCCCCCCcCCHHHHHHHH
Confidence            3 455599999888764       489999999999987643221100    0 0000000 001112467899999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++..+.  ..|+.+.+.|.
T Consensus       253 ~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          253 ISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCccccCCCCCEEEeCCC
Confidence            99997642  34677777653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.77  E-value=3.8e-18  Score=140.49  Aligned_cols=192  Identities=14%  Similarity=0.069  Sum_probs=129.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.+.+..  ..++.++.+|++|++++.++++       ++
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREAAE--AVGAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--TTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HcCCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     555433322  1258899999999998888775       48


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||||...                   +.++..+++++.+    .+ ..++|. |+.. ....     .....|..+
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~-----~~~~~Y~as  151 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGN-----LGQANYAAS  151 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCC-----TTCHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCC-----CCchhHHHH
Confidence            99999999643                   3345555555543    34 577776 5543 2221     122345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|++++.++||++.+........        .....+........+.+++|+|++++.++.++
T Consensus       152 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~  223 (245)
T 1uls_A          152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE--------KVREKAIAATPLGRAGKPLEVAYAALFLLSDE  223 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH--------HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH--------HHHHHHHhhCCCCCCcCHHHHHHHHHHHhCch
Confidence            9998877764       48999999999987664321100        00000000001123678999999999999764


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+.+.|.
T Consensus       224 ~~~~tG~~~~vdgG  237 (245)
T 1uls_A          224 SSFITGQVLFVDGG  237 (245)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCCcCCEEEECCC
Confidence            2  34677777654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.77  E-value=1.9e-18  Score=144.22  Aligned_cols=193  Identities=13%  Similarity=0.087  Sum_probs=130.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.    .++.+.+ +.+.  ...+.++.+|++|.+++.++++      
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASS----AGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW  104 (269)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC----hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999999853    3333222 2221  3468899999999999888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++..++++    +++.+ ..++|. |+.......     .....|
T Consensus       105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  178 (269)
T 4dmm_A          105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGN-----PGQANY  178 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCC-----TTCHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC-----CCchhH
Confidence             6899999999763                   3344444444    45555 567776 442211111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|+++..++||.+.+.........           ..........+.+++|+|++++.++
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----------~~~~~~p~~r~~~~~dvA~~v~~l~  247 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAE-----------KLLEVIPLGRYGEAAEVAGVVRFLA  247 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHH-----------HHGGGCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHH-----------HHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            5599998887763       589999999999987643322110           0000011224578899999999999


Q ss_pred             cCCc---CCCceEEEcCC
Q 039623          201 DGPR---TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~---~~~~~~~~~~~  215 (292)
                      .++.   ..|+.+++.|.
T Consensus       248 s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          248 ADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             HCGGGGGCCSCEEEESTT
T ss_pred             CCcccCCCcCCEEEECCC
Confidence            8742   24778888754

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.77  E-value=1.6e-18  Score=144.76  Aligned_cols=197  Identities=13%  Similarity=0.167  Sum_probs=132.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTD-----PSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            579999999999999999999999999999998     5544332 2222  3468899999999999888876      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHH----HHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKI----IAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l----~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++..+    +..+++.+ ..++|. |+.......     .+...|
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~-----~~~~~Y  175 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELAR-----ATVAPY  175 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBC-----TTCHHH
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCC-----CCchhH
Confidence             6899999999753                   3344444    44445555 567776 443322221     223445


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|+++..++||.+.+.........      ...............+.+++|+|++++.++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedva~~v~~L~  249 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN------PEFDAWVKARTPAKRWGKPQELVGTAVFLS  249 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC------HHHHHHHHHHSTTCSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            5599999888764       579999999999987643222100      000000000111234578999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       250 s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          250 ASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CccccCCCCcEEEECCC
Confidence            7643  34777888753

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.77  E-value=1.3e-17  Score=140.09  Aligned_cols=208  Identities=14%  Similarity=0.090  Sum_probs=133.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCC-------Ccchhh-Hhhh--hcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASD-------PVKGKL-IEIF--KNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~-~~~~--~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.....       .++.+. .+.+  ...++.++.+|++|++++.+++
T Consensus        11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   90 (281)
T 3s55_A           11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV   90 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            57999999999999999999999999999999743210       111111 1111  2356889999999999988887


Q ss_pred             c-------cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCcc
Q 039623           72 K-------QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        72 ~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                      +       ++|++||+||...                   +.++..++++    +++.+ ..++|+ |+.......    
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  165 (281)
T 3s55_A           91 AEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSAN----  165 (281)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC----
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCCC----
Confidence            6       6999999999743                   3445555555    45555 577776 443221111    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceecccccccccc--CCCCCCCCCce-----eecCCCcceEEe
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ--IGAPAPPREKV-----TIFGDGNAGAVY  186 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~  186 (292)
                       .+...|..+|..++.+.+.       .|+++..++||.+.+........  ...........     ...........+
T Consensus       166 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3s55_A          166 -FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF  244 (281)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence             1234455599999888763       48999999999998764321100  00000000000     000111222567


Q ss_pred             eccchHHHHHHHhhcCCcC--CCceEEEcCC
Q 039623          187 NKEDDIATYTINSIDGPRT--LNKTLYIRPP  215 (292)
Q Consensus       187 i~v~D~a~~~~~~l~~~~~--~~~~~~~~~~  215 (292)
                      .+++|+|++++.++.+...  .|+.+++.|.
T Consensus       245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAG  275 (281)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            8999999999999986532  4778888754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.77  E-value=3.2e-18  Score=143.03  Aligned_cols=195  Identities=11%  Similarity=0.103  Sum_probs=128.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||++++++|+++|++|++++|+.    .++.+.+.. +  ...++.++.+|++|.+++.++++      
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSN----AEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD  105 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999999963    222222222 2  23478999999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++    +.++..+++.+ ..++|. |+......     ..+...|
T Consensus       106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y  179 (271)
T 4iin_A          106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERG-----NMGQTNY  179 (271)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-----CTTCHHH
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCC-----CCCchHh
Confidence             6999999999753                   2233    44444455555 577776 43221111     1223455


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .++++..++||.+.+.........        ....+........+.+++|+|++++.++
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~p~dvA~~i~~l~  251 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE--------LKADYVKNIPLNRLGSAKEVAEAVAFLL  251 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------------CGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH--------HHHHHHhcCCcCCCcCHHHHHHHHHHHh
Confidence            5599999888763       578999999999876643322111        0011111122335678999999999999


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      ..+.  ..|+.+++.|
T Consensus       252 s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          252 SDHSSYITGETLKVNG  267 (271)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CCCcCCCcCCEEEeCC
Confidence            7643  3477777764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.77  E-value=5.4e-18  Score=142.25  Aligned_cols=196  Identities=12%  Similarity=0.083  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHcc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIKQ-----   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~-----   73 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+.     ++.+.+...   ...++.++.+|++|.+++.++++.     
T Consensus        35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSH-----PADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSS-----CCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4799999999999999999999999999999983     333222221   145689999999999998888763     


Q ss_pred             --CCEEEEcCcCCC---------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           74 --VDVVISTVSRGQ---------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        74 --~d~vi~~a~~~~---------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                        +|+|||+||...                     +.+    ++.+++.+++.+ .+++|+ |+.......   ...+..
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~~  185 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN---IPQLQA  185 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC------CCHH
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC---CCCCcc
Confidence              899999998531                     122    678888888877 788887 443322110   012233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+++.       .+ +++.++||++.+.......        ......+........+++++|+|++++.
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~p~~~~~~~~dvA~~~~~  256 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS--------KDMKAKWWQLTPLGREGLTQELVGGYLY  256 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC--------HHHHHHHHHHSTTCSCBCGGGTHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC--------hHHHHHHHHhCCccCCcCHHHHHHHHHH
Confidence            455599999998874       35 8899999998766432100        0000000000112247899999999999


Q ss_pred             hhcCCc--CCCceEEEcCC
Q 039623          199 SIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~  215 (292)
                      ++..+.  ..|+.+++.|.
T Consensus       257 l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          257 LASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCccccCccCCEEEECCC
Confidence            997642  34677887653

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.77  E-value=9.3e-18  Score=141.64  Aligned_cols=196  Identities=15%  Similarity=0.093  Sum_probs=132.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhc---CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKN---LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~---~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+..   .++.++.+|++|++++.++++     
T Consensus        42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARS-----PRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     4444332 22222   468999999999988877765     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        ++|++||+||...                   +.++..+++++    ++.+ ..++|. |+ .+.....     ....
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~-----~~~~  190 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGY-----PGWS  190 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBC-----TTCH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCC-----CCCH
Confidence              5799999999753                   44555566655    4566 677776 44 3321221     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++..++||.+.+.........        .............+..++|+|++++.
T Consensus       191 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~p~dvA~~v~f  262 (293)
T 3rih_A          191 HYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEE--------YISGMARSIPMGMLGSPVDIGHLAAF  262 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHH--------HHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHH--------HHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            455599999888763       589999999999987643211100        00000000111234578999999999


Q ss_pred             hhcCCc--CCCceEEEcCCC
Q 039623          199 SIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~~  216 (292)
                      ++....  ..|+.+++.|..
T Consensus       263 L~s~~a~~itG~~i~vdGG~  282 (293)
T 3rih_A          263 LATDEAGYITGQAIVVDGGQ  282 (293)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCccccCCCCCEEEECCCc
Confidence            997643  347788887543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.77  E-value=3.4e-17  Score=137.60  Aligned_cols=203  Identities=14%  Similarity=0.075  Sum_probs=131.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .++.+.+. .+.  ...+.++.+|++|++++.++++      
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           29 PVALITGAGSGIGRATALALAADGVTVGALGRT-----RTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            469999999999999999999999999999998     54443332 222  3468899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++||+||...                    +.++..+++++    ++.+ ..++|. |+.......   +.++...
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~---~~~~~~~  179 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTF---TTPGATA  179 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC---CSTTCHH
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCC---CCCCchH
Confidence             6999999999642                    34455555554    6666 577776 443222110   1112334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce--EEeeccchHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG--AVYNKEDDIATYTI  197 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~D~a~~~~  197 (292)
                      |..+|..++.+.+.       .|+++..++||++.+............ ...............  ..+..++|+|++++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~  258 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE-ETAIPVEWPKGQVPITDGQPGRSEDVAELIR  258 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH-HHSCCCBCTTCSCGGGTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch-hhhhhhhhhhhcCccccCCCCCHHHHHHHHH
Confidence            55599999888774       478999999999976643322100000 000000001111111  24568899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..|+.+++.|
T Consensus       259 fL~s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          259 FLVSERARHVTGSPVWIDG  277 (283)
T ss_dssp             HHTSGGGTTCCSCEEEEST
T ss_pred             HHcCccccCCcCCEEEECc
Confidence            9997643  2477777764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.77  E-value=5.1e-18  Score=141.66  Aligned_cols=197  Identities=15%  Similarity=0.097  Sum_probs=129.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhh--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIF--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.    .++.+. ...+  ...++.++.+|++|.+++.++++      
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER----NDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSC----HHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999998652    222221 1222  23568999999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++.+++++    +++.+ ..++|+ |+.......     .+...|
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  175 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGA-----FGQANY  175 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTBHHH
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCC-----CCcchH
Confidence             6999999999753                   3344444444    44455 567776 442211111     123445


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|+++..++||.+.+..........    ...   ..........+.+++|+|++++.++
T Consensus       176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----~~~---~~~~~~~~~~~~~p~dvA~~v~~L~  248 (269)
T 3gk3_A          176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV----LEA---KILPQIPVGRLGRPDEVAALIAFLC  248 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------C---CSGGGCTTSSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH----HHH---HhhhcCCcCCccCHHHHHHHHHHHh
Confidence            5599998888763       4799999999998876443221110    000   0111112234578999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       249 s~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          249 SDDAGFVTGADLAINGG  265 (269)
T ss_dssp             STTCTTCCSCEEEESTT
T ss_pred             CCCcCCeeCcEEEECCC
Confidence            8653  34778888754

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.77  E-value=2e-18  Score=142.34  Aligned_cols=197  Identities=14%  Similarity=0.060  Sum_probs=131.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++..+.+|++|++++.++++       ++
T Consensus         7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            7 KTALVTGAAQGIGKAIAARLAADGATVIVSDIN-----AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            579999999999999999999999999999998     555544433335678999999999999888876       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..++++    +++.+...++|. |+.......     +....|..+
T Consensus        82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  156 (247)
T 3rwb_A           82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----PNMAAYVAA  156 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----TTCHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----CCchhhHHH
Confidence            99999999753                   3344444444    655542466765 432211111     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||++.+.........       ..............+.+++|+|++++.++...
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~  229 (247)
T 3rwb_A          157 KGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-------EAFGFVEMLQAMKGKGQPEHIADVVSFLASDD  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-------GGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-------HHHHHHhcccccCCCcCHHHHHHHHHHHhCcc
Confidence            9998888763       589999999999876533211100       00000000011123467899999999999765


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+++.|.
T Consensus       230 ~~~itG~~i~vdGG  243 (247)
T 3rwb_A          230 ARWITGQTLNVDAG  243 (247)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             ccCCCCCEEEECCC
Confidence            3  24677777643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.77  E-value=4.9e-18  Score=143.58  Aligned_cols=199  Identities=14%  Similarity=0.079  Sum_probs=132.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|+||+++++.|+++|++|++.+|+..   .++.+.+...   ...++.++.+|++|.+++.++++      
T Consensus        50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE---EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG---HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc---hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999988632   1222222221   24578899999999988877764      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhCCcc--eeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAGNVK--RFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~~~~--~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       ++|++||+||...                    +.++..+++++.+.- .+  ++|+ |+.......     .....|.
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~isS~~~~~~~-----~~~~~Y~  200 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTSSIQAYQPS-----PHLLDYA  200 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCGGGTSCC-----TTCHHHH
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEECChhhccCC-----CCchHHH
Confidence             6899999999632                    556777888876653 23  6665 443222111     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .|+++..++||.+.+........      .......+........+.+++|+|++++.++.
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s  274 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ------TQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS  274 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS------CGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC------CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            599999888764       48999999999998754111000      00001111112223356789999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      ...  ..|+++++.|.
T Consensus       275 ~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          275 QESSYVTAEVHGVCGG  290 (294)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             ccccCCCCCEEEECCC
Confidence            643  34778888754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.77  E-value=8e-18  Score=140.70  Aligned_cols=198  Identities=11%  Similarity=0.084  Sum_probs=123.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|+++|++|.++.++.    .++.+.+. .+.  ..++.++.+|++|.+++.++++      
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN----REAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4699999999999999999999999998874432    33333222 221  3468899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHh------CCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEA------GNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~------~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                       ++|++||+||...                    +.++..+++++.+.      +...++|+ |+.......    ....
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~  178 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS----ATQY  178 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC----TTTC
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC----CCCc
Confidence             6899999999642                    44556666666543      11345665 442211111    0012


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .|+++..++||.+.+.........       ..............+.+++|+|++++
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~edvA~~i~  251 (272)
T 4e3z_A          179 VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP-------DRAREMAPSVPMQRAGMPEEVADAIL  251 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------------CCTTSSCBCHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh-------HHHHHHhhcCCcCCCcCHHHHHHHHH
Confidence            3455599999887763       489999999999987643221100       00001111112234567899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..|+.+++.|
T Consensus       252 ~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          252 YLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCCccccccCCEEeecC
Confidence            9997543  3467777764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.77  E-value=2.7e-18  Score=144.93  Aligned_cols=198  Identities=15%  Similarity=0.140  Sum_probs=133.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|+||+++++.|+++|++|++++|+..    ...+.+...   ...++.++.+|++|++++.++++      
T Consensus        48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE----GDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999832    112222211   23568899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                       ++|++||+||...                    +.++..+++++.+.- .-.++|. |+.......     .....|..
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~a  198 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN-----ETLIDYSA  198 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----TTCHHHHH
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----CCChhHHH
Confidence             6899999998642                    556777888877642 1246665 432211111     12334555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..++||.+.+........       ......+........+.+++|+|++++.++..
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~  271 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-------EKKVSQFGSNVPMQRPGQPYELAPAYVYLASS  271 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-------HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-------HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCC
Confidence            99999888764       48999999999998765322111       00111122222234567899999999999976


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      ..  ..|+.+++.|.
T Consensus       272 ~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          272 DSSYVTGQMIHVNGG  286 (291)
T ss_dssp             GGTTCCSCEEEESSS
T ss_pred             ccCCCcCCEEEECCC
Confidence            43  34777777653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.77  E-value=2.4e-18  Score=143.22  Aligned_cols=194  Identities=11%  Similarity=0.116  Sum_probs=127.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+..     +        ..++.++.+|++|++++.++++       ++
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-----G--------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCC-----C--------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcc-----c--------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999842     2        2467899999999999888776       69


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++.+    .+ ..++|+ |+.......     .+...|..+
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~s  149 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIIT-----KNASAYVTS  149 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCC-----TTBHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCC-----CCchhHHHH
Confidence            99999999643                   3444555555543    34 567776 443222111     123445559


Q ss_pred             HHHHHHHHHH----cC--ccEEEEecceeccccccccccCCCCCCCC----CceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          131 KIKIRRAIEA----EG--IQYTYVSCNCFAGYFLPTLAQIGAPAPPR----EKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       131 K~~~e~~~~~----~~--~~~~~ir~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      |..++.+.+.    .+  +++++++||.+.+............ ...    .....+........+++++|+|++++.++
T Consensus       150 K~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~  228 (264)
T 2dtx_A          150 KHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVG-SDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA  228 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHC-SCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccc-cCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999888764    22  8899999999876543221000000 000    00000000011234789999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ..+.  ..|+.+.+.|.
T Consensus       229 s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          229 SREASFITGTCLYVDGG  245 (264)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CchhcCCCCcEEEECCC
Confidence            7642  34677777653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.77  E-value=2.3e-17  Score=138.49  Aligned_cols=205  Identities=13%  Similarity=0.049  Sum_probs=130.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC--------CCcchhhHhh-h--hcCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS--------DPVKGKLIEI-F--KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~-~--~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+....        +.++.+.+.. +  ....+.++.+|++|++++.++
T Consensus        16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   95 (280)
T 3pgx_A           16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL   95 (280)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            4699999999999999999999999999999853211        1233322221 1  134688999999999998888


Q ss_pred             Hc-------cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCc
Q 039623           71 IK-------QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        71 ~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~  119 (292)
                      ++       ++|++|||||...                   +.++..+++++    ++.+.-.++|. |+.......   
T Consensus        96 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  172 (280)
T 3pgx_A           96 VADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT---  172 (280)
T ss_dssp             HHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC---
Confidence            75       6899999999754                   33444455544    44432356765 443222111   


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceecccccccc-----ccCCCCCCCCCceeecCCCcceEEee
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTL-----AQIGAPAPPREKVTIFGDGNAGAVYN  187 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i  187 (292)
                        .....|..+|..++.+.+.       .|+++..++||.+.+......     .... . .......... .... .+.
T Consensus       173 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~-~~~~~~~~~~-~~~~-r~~  246 (280)
T 3pgx_A          173 --PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARH-P-SFVHSFPPMP-VQPN-GFM  246 (280)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHC-G-GGGGGSCCBT-TBCS-SCB
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcC-c-hhhhhhhhcc-cCCC-CCC
Confidence              1233455599999887763       589999999999987643220     0000 0 0000011111 1112 478


Q ss_pred             ccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          188 KEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +++|+|++++.++....  ..|+.+++.|.
T Consensus       247 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          247 TADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            99999999999997653  34777777643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.77  E-value=5.5e-18  Score=141.23  Aligned_cols=198  Identities=14%  Similarity=0.070  Sum_probs=130.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+... .+   ...++.++.+|++|++++.++++     
T Consensus        21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           21 KRALITGATKGIGADIARAFAAAGARLVLSGRD-----VSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     54443322 22   34578999999999988877775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++||+||...                   +.++..+++++    ++.+.-.++|. |+.......     .....
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~  170 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL-----PDHYA  170 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTCHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----CCChH
Confidence              6899999999754                   33444444444    34331246665 443222111     12344


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .|+++..++||++.+.........      ...............+.+++|+|++++.+
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~dva~~v~~L  244 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD------EAKSAPMIARIPLGRFAVPHEVSDAVVWL  244 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS------HHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC------hHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            55599998887763       479999999999976543221100      00000001111123457899999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +....  ..|+.+++.|.
T Consensus       245 ~s~~~~~itG~~i~vdGG  262 (266)
T 4egf_A          245 ASDAASMINGVDIPVDGG  262 (266)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhcCccCcEEEECCC
Confidence            97643  34777887653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=4.2e-18  Score=142.93  Aligned_cols=186  Identities=17%  Similarity=0.177  Sum_probs=125.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhhc----CCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFKN----LGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~----~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++||||||+|+||+++++.|+++|++|++++|+     +++.+.+. .+..    ..+.++.+|++|++++.++++    
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----hHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999998     54443322 2221    347889999999999888775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCc--ceeec-cCCCCCCccCCccCCC
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNV--KRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~--~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                         ++|+|||+||...                   +.+    ++.+++.+++.+ .  .++|+ |+......   .+..+
T Consensus       108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~---~~~~~  183 (279)
T 1xg5_A          108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRV---LPLSV  183 (279)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSC---CSCGG
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhccc---CCCCC
Confidence               6999999999643                   222    778888888876 5  67776 44322110   11122


Q ss_pred             CcchHHHHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          124 AKSAYADKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      ...|..+|..++.+.+.         .+++++.++||++.+........       ........ ......+++++|+|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~dvA~  255 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-------KDPEKAAA-TYEQMKCLKPEDVAE  255 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-------TCHHHHHH-HHC---CBCHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcc-------cChhHHhh-hcccccCCCHHHHHH
Confidence            33455599998877652         46899999999987764211110       00000000 011235689999999


Q ss_pred             HHHHhhcCCc
Q 039623          195 YTINSIDGPR  204 (292)
Q Consensus       195 ~~~~~l~~~~  204 (292)
                      +++.++..+.
T Consensus       256 ~i~~l~~~~~  265 (279)
T 1xg5_A          256 AVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHSCT
T ss_pred             HHHHHhcCCc
Confidence            9999998754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.76  E-value=2e-17  Score=137.47  Aligned_cols=176  Identities=14%  Similarity=0.117  Sum_probs=118.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++||||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.  ..++.++.+|++|.+++.++++      
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARD-----VEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998     55543332 221  3468899999999999888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       .+|++||+||...                    +.++..++++    +++.+ ..++|+ |+.......     .+...
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  178 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPV-----ADGAA  178 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCC-----TTCHH
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCC-----CCCch
Confidence             4899999999721                    3344444444    44555 577776 443322221     22344


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++..++||.+.+........                ......+++.+|+|++++.+
T Consensus       179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~~p~dvA~~v~~l  242 (262)
T 3rkr_A          179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------------KKSALGAIEPDDIADVVALL  242 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------------ccccccCCCHHHHHHHHHHH
Confidence            55599998888763       58999999999887653221100                01123467899999999999


Q ss_pred             hcCCc
Q 039623          200 IDGPR  204 (292)
Q Consensus       200 l~~~~  204 (292)
                      +....
T Consensus       243 ~s~~~  247 (262)
T 3rkr_A          243 ATQAD  247 (262)
T ss_dssp             HTCCT
T ss_pred             hcCcc
Confidence            98753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.76  E-value=4.4e-18  Score=142.05  Aligned_cols=195  Identities=15%  Similarity=0.111  Sum_probs=131.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +  ....+..+.+|++|.+++.++++      
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           29 QVAIVTGASRGIGRAIALELARRGAMVIGTATT-----EAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            469999999999999999999999999999998     544433222 2  23468899999999998888776      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++|||||...                   +.++..+++++    ++.+ -.++|. |+.......     .....|
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  177 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGN-----PGQVNY  177 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTBHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC-----CCchhH
Confidence             6899999999643                   34455555554    4444 466776 442211111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|+++..++||.+.+.........        .............+.+++|+|++++.++
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~p~~r~~~pedvA~~v~~L~  249 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE--------QQTALKTQIPLGRLGSPEDIAHAVAFLA  249 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH--------HHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            5599998887763       479999999999876543221100        0001111122335678999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       250 s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          250 SPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCCcCCccCcEEEECCC
Confidence            6542  34778888754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.76  E-value=9.9e-18  Score=138.30  Aligned_cols=189  Identities=15%  Similarity=0.145  Sum_probs=125.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-CHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-DHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     ++..   +.+  ..+.++ +|+. +.+.+.+.+.++|++||+
T Consensus        20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~---~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----EELL---KRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHH---Hhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEEC
Confidence            579999999999999999999999999999998     4222   222  256666 9993 334444444489999999


Q ss_pred             CcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHH
Q 039623           81 VSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        81 a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      ||...                       +..++.+++.+++.+ ..++|+ |+.......     .+...|..+|..++.
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a~~~  162 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPI-----ENLYTSNSARMALTG  162 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTBHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCC-----CCCchHHHHHHHHHH
Confidence            98643                       223556677777777 788887 443222111     123345559999888


Q ss_pred             HHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHHHhhcCCc--CC
Q 039623          137 AIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTINSIDGPR--TL  206 (292)
Q Consensus       137 ~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~  206 (292)
                      +.+.       .|++++.++||.+.+.........        ... .+........+.+++|+|++++.++..+.  ..
T Consensus       163 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~t  234 (249)
T 1o5i_A          163 FLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE--------EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT  234 (249)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH--------HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh--------hHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence            7763       589999999999987653221100        000 00001112346799999999999997643  24


Q ss_pred             CceEEEcCC
Q 039623          207 NKTLYIRPP  215 (292)
Q Consensus       207 ~~~~~~~~~  215 (292)
                      |+.+++.|.
T Consensus       235 G~~~~vdgG  243 (249)
T 1o5i_A          235 GQTIVVDGG  243 (249)
T ss_dssp             SCEEEESTT
T ss_pred             CCEEEECCC
Confidence            777887754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.76  E-value=9.4e-18  Score=138.73  Aligned_cols=187  Identities=17%  Similarity=0.156  Sum_probs=124.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+..     +.        ..+..+.+|++|++++.++++       .+
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~--------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE-----PP--------EGFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSC-----CC--------TTSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH-----hh--------ccceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999832     22        137889999999999888775       47


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHH----HHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIA----AVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~----a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++    .+++.+ ..++|. |+.......     .....|..+
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  162 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGS-----AGQANYAAS  162 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCH-----HHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC-----CCcHHHHHH
Confidence            99999999642                   233444444    444456 677776 443322221     112345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .+++++.++||++.+........        .....+........+++++|+|++++.++.++
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~  234 (253)
T 2nm0_A          163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD--------EQRANIVSQVPLGRYARPEEIAATVRFLASDD  234 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9998888764       47899999999887654321100        00000000111224689999999999999764


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+.+.|.
T Consensus       235 ~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          235 ASYITGAVIPVDGG  248 (253)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             ccCCcCcEEEECCc
Confidence            3  24677777654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.76  E-value=3.1e-18  Score=141.99  Aligned_cols=194  Identities=11%  Similarity=0.067  Sum_probs=120.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHcc----CCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQ----VDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~----~d~   76 (292)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.     ++.+       .  . +.+|++|.+++.++++.    +|+
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~-------~--~-~~~Dl~~~~~v~~~~~~~~~~id~   65 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD-----AEVI-------A--D-LSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS-----SSEE-------C--C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc-----hhhc-------c--c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence            78999999999999999999999999999999983     2221       1  1 67899999999998864    599


Q ss_pred             EEEcCcCCC------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCc---cC-------------------
Q 039623           77 VISTVSRGQ------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVD---RS-------------------  117 (292)
Q Consensus        77 vi~~a~~~~------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~---~~-------------------  117 (292)
                      +||+||...            +.++..+++++.    +.+ ..++|+ |+......   ..                   
T Consensus        66 lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (257)
T 1fjh_A           66 LVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             EEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             EEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhhhhh
Confidence            999999653            445566666654    444 577776 43222100   00                   


Q ss_pred             C-ccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeecc
Q 039623          118 Q-NVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKE  189 (292)
Q Consensus       118 ~-~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  189 (292)
                      + .+..+...|..+|..++.+.+.       .++++++++||.+.+..........   ........+  ......+.++
T Consensus       145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~  219 (257)
T 1fjh_A          145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP---RYGESIAKF--VPPMGRRAEP  219 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------C--CCSTTSCCCT
T ss_pred             cccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch---hHHHHHHhc--ccccCCCCCH
Confidence            0 1111233444599999888764       4899999999999876543221000   000000000  0111246899


Q ss_pred             chHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          190 DDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       190 ~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +|+|++++.++..+.  ..|+.+.+.|.
T Consensus       220 ~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          220 SEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            999999999997652  34667777643

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.76  E-value=1.8e-17  Score=137.71  Aligned_cols=184  Identities=18%  Similarity=0.196  Sum_probs=119.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.  ...+..+.+|++|.+++.++++      
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGAKILLGARR-----QARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     55543332 222  3457889999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++|||||...                   +.+    ++.++..+++.+ ..++|. |+.......     .....|
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~-----~~~~~Y  153 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVV-----PTAAVY  153 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-----TTCHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccC-----CCChhH
Confidence             6899999999754                   233    344455555556 577776 443222221     123345


Q ss_pred             HHHHHHHHHHHHH-----cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          128 YADKIKIRRAIEA-----EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       128 ~~~K~~~e~~~~~-----~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      ..+|..++.+.+.     .++++..++||++.+.........       .......  .....+.+.+|+|++++.++..
T Consensus       154 ~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~--~~~~~~~~pedvA~~v~~l~s~  224 (264)
T 3tfo_A          154 CATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE-------ETMAAMD--TYRAIALQPADIARAVRQVIEA  224 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--------------------------------CCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch-------hHHHHHH--hhhccCCCHHHHHHHHHHHhcC
Confidence            5599998887764     378899999998876543322111       0000000  0111246899999999999987


Q ss_pred             CcC
Q 039623          203 PRT  205 (292)
Q Consensus       203 ~~~  205 (292)
                      +..
T Consensus       225 ~~~  227 (264)
T 3tfo_A          225 PQS  227 (264)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.76  E-value=5.8e-18  Score=140.11  Aligned_cols=203  Identities=11%  Similarity=0.064  Sum_probs=129.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      .++++||||+|+||+++++.|+++|  +.|++.+|+     .++.+.+......++.++.+|++|.+++.++++      
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS-----EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC-----HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC-----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            0679999999999999999999985  788888887     555544444345678999999999999888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++|||||...                    +.++..+++++    ++.+  .++|. |+.......     .+...
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~-----~~~~~  149 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYF-----SSWGA  149 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSS-----CCSHH
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCC-----CCcch
Confidence             6899999999732                    34455555554    5544  56665 443222221     12334


Q ss_pred             hHHHHHHHHHHHHH-----cCccEEEEecceeccccccccccCCCCC-CCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          127 AYADKIKIRRAIEA-----EGIQYTYVSCNCFAGYFLPTLAQIGAPA-PPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-----~~~~~~~ir~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      |..+|..++.+.+.     .++++..++||.+.+............. ........+........+.+++|+|++++.++
T Consensus       150 Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~  229 (254)
T 3kzv_A          150 YGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLA  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHH
Confidence            55599999888774     4789999999998776543221110000 00000011111112345789999999999999


Q ss_pred             cCCc---CCCceEEEcCC
Q 039623          201 DGPR---TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~---~~~~~~~~~~~  215 (292)
                      ....   ..|+.+++.|.
T Consensus       230 s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          230 LHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             HHCCCGGGTTCEEETTCG
T ss_pred             hhcccCCCCccEEEecCc
Confidence            7652   34666666543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=8.4e-18  Score=140.59  Aligned_cols=174  Identities=11%  Similarity=0.073  Sum_probs=122.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC-----HHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            579999999999999999999999999999998     4443322 2222  3468999999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|+|||+||...                   +.+    ++.+++.+++.+ ..++|+ |+.......     .+...|
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y  180 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV-----PFLLAY  180 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH-----HHHHHH
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC-----CCchhH
Confidence             6899999999643                   233    444555555566 678876 443322211     122345


Q ss_pred             HHHHHHHHHHHHH----------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          128 YADKIKIRRAIEA----------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       128 ~~~K~~~e~~~~~----------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..+|..++.+.+.          .++++++++||.+.+....           . ..      .....+++++|+|++++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~-----------~-~~------~~~~~~~~~~dva~~i~  242 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-----------N-PS------TSLGPTLEPEEVVNRLM  242 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-----------C-TH------HHHCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc-----------c-cc------ccccCCCCHHHHHHHHH
Confidence            5599998887763          2789999999988765321           0 00      11235689999999999


Q ss_pred             HhhcCCc
Q 039623          198 NSIDGPR  204 (292)
Q Consensus       198 ~~l~~~~  204 (292)
                      .++.+++
T Consensus       243 ~~~~~~~  249 (272)
T 1yb1_A          243 HGILTEQ  249 (272)
T ss_dssp             HHHHTTC
T ss_pred             HHHHcCC
Confidence            9998753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.76  E-value=4.2e-18  Score=144.16  Aligned_cols=218  Identities=11%  Similarity=0.089  Sum_probs=137.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhc--C---CcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKN--L---GVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~--~---~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+..  .   ++.++.+|++|++++.++++   
T Consensus        27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            469999999999999999999999999999998     5544332 22221  2   68899999999999888775   


Q ss_pred             ----cCCEEEEcCcCCC---------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCccCC
Q 039623           73 ----QVDVVISTVSRGQ---------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 ----~~d~vi~~a~~~~---------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                          ++|++||+||...                     +.++..+++++.+    .+  .++|. |+.......    ..
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~~----~~  175 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQA----HS  175 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSSC----CT
T ss_pred             HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccCC----CC
Confidence                6899999998532                     2334455555443    33  56765 443211110    01


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCC-CCceeecCCCcceEEeeccchHHH
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPP-REKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      ....|..+|..++.+.+.       .|+++++++||.+.+............... ......+........+.+++|+|+
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  255 (297)
T 1xhl_A          176 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIAN  255 (297)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            223454599998888763       589999999999987643221000000000 000000000011224688999999


Q ss_pred             HHHHhhcCC---cCCCceEEEcCCCccccHHHHHHHHHHH
Q 039623          195 YTINSIDGP---RTLNKTLYIRPPGNVYSFNELVTLWENK  231 (292)
Q Consensus       195 ~~~~~l~~~---~~~~~~~~~~~~~~~~t~~e~~~~~~~~  231 (292)
                      +++.++..+   ...|+.+.+.|.. .+.+.+.+..+.++
T Consensus       256 ~v~~l~s~~~~~~itG~~i~vdGG~-~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          256 IIVFLADRNLSSYIIGQSIVADGGS-TLVMGMQTHDLMSV  294 (297)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTG-GGCCGGGGSCHHHH
T ss_pred             HHHHHhCCcccCCccCcEEEECCCc-cccccccccchhhh
Confidence            999999754   2347778887654 66666655555444

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.76  E-value=2.9e-18  Score=143.07  Aligned_cols=195  Identities=11%  Similarity=0.148  Sum_probs=128.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++||||||+|+||+++++.|+++|++|++++|+...     .       ...+..+.+|++|.+++.++++       ++
T Consensus        15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~-----~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS-----D-------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC-------C-------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh-----c-------cCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998432     1       2256789999999999888875       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..++++    +++.+ ..++|. |+.......     .....|..+
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  156 (269)
T 3vtz_A           83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAAT-----KNAAAYVTS  156 (269)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBC-----TTCHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC-----CCChhHHHH
Confidence            99999999754                   3344444444    44555 577776 443222111     123345559


Q ss_pred             HHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCC----CceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          131 KIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPR----EKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       131 K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      |..++.+.+.      .++++..++||.+.+............ ...    .....+........+.+++|+|++++.++
T Consensus       157 Kaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  235 (269)
T 3vtz_A          157 KHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVG-EDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLA  235 (269)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHC-CSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhcccc-ccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999988874      278899999999987643221100000 000    00001111112235678999999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       236 s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          236 SDRSSFITGACLTVDGG  252 (269)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCccCCCcCcEEEECCC
Confidence            7643  34778888753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.76  E-value=1.5e-17  Score=139.51  Aligned_cols=211  Identities=13%  Similarity=0.082  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCC-------CcchhhH-hhh--hcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASD-------PVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      +++|||||+|+||+++++.|+++|++|++++|+.....       .++.+.. +.+  ...++.++.+|++|++++.+++
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   93 (278)
T 3sx2_A           14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL   93 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            57999999999999999999999999999998732110       1222111 111  2457899999999999988887


Q ss_pred             c-------cCCEEEEcCcCCC---------------chhHHHHHHHH----HHhCCcceeec-cC-CCCCCccCCccCCC
Q 039623           72 K-------QVDVVISTVSRGQ---------------IPEQAKIIAAV----KEAGNVKRFLP-SE-FGNDVDRSQNVVEP  123 (292)
Q Consensus        72 ~-------~~d~vi~~a~~~~---------------~~~~~~l~~a~----~~~~~~~~~i~-s~-~g~~~~~~~~~~~~  123 (292)
                      +       ++|++|||||...               +.++..+++++    ++.+.-.++|. |+ .+....  ..+..+
T Consensus        94 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~~  171 (278)
T 3sx2_A           94 QAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV--GSADPG  171 (278)
T ss_dssp             HHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC--CCSSHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC--ccCCCC
Confidence            6       6999999999754               34455555554    44331356665 43 332211  111112


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCC-C--CCCCCCceeecCCCcceEEeeccchHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG-A--PAPPREKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                      ...|..+|..++.+.+.       .|+++..++||.+.+.......... .  ................ ..+.+++|+|
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA  250 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence            23455599999888764       4799999999999876432110000 0  0000000111222222 4678999999


Q ss_pred             HHHHHhhcCCc--CCCceEEEcCC
Q 039623          194 TYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       194 ~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++++.++....  ..|+.+++.|.
T Consensus       251 ~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          251 NAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCcccccccCCEEeECCC
Confidence            99999997643  34777877653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.76  E-value=1.8e-17  Score=141.63  Aligned_cols=192  Identities=11%  Similarity=0.051  Sum_probs=118.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++||||||+|+||++++++|+++|++|++++|+     .++.+.+. .+.    ...+.++.+|++|.+++.++++    
T Consensus         9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR-----QDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998     55543322 221    1268999999999999888875    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC---------Ccceeec-cCCCCCCccCCcc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG---------NVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~---------~~~~~i~-s~~g~~~~~~~~~  120 (292)
                         ++|++||+||...                   +.++.++++++.+.-         .-.++|. |+.......    
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~----  159 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA----  159 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC----
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC----
Confidence               5799999999643                   445566666554432         0245665 443322221    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce----eecCC-CcceEEeec
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV----TIFGD-GNAGAVYNK  188 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~i~  188 (292)
                       .....|..+|..++.+.+.       .|++++.++||.+.+........... .......    ..... .......++
T Consensus       160 -~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (319)
T 3ioy_A          160 -GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPD-ALKGEVKPVDKTAVERLAGVHEFGME  237 (319)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSSBC
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCch-hhcccccchhHHHHHHHHHhhhcCCC
Confidence             1233455599977766653       48999999999997764432111000 0000000    00000 000111278


Q ss_pred             cchHHHHHHHhhcCCc
Q 039623          189 EDDIATYTINSIDGPR  204 (292)
Q Consensus       189 v~D~a~~~~~~l~~~~  204 (292)
                      ++|+|+.++.+++.++
T Consensus       238 pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          238 PDVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999998753

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.76  E-value=9.2e-18  Score=137.65  Aligned_cols=193  Identities=18%  Similarity=0.154  Sum_probs=125.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     +++.  .+.+   ++..+.+|++| +++.++++       ++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~-----~~~~--~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRN-----PEEA--AQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----CHHH--HHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHH--HHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998     4431  1222   48899999998 66655543       69


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.+    ++.+++.+++.+ ..++|+ |+.......   ...+...|..+
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~~~~~~~Y~~s  147 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAG---GPVPIPAYTTA  147 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---TTSCCHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCC---CCCCCccHHHH
Confidence            99999999643                   223    344444455666 678886 443221111   01123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++++++||.+.+.........      ...............+.+++|+|++++.++.++
T Consensus       148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  221 (239)
T 2ekp_A          148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN------PELYEPITARIPMGRWARPEEIARVAAVLCGDE  221 (239)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC------HHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            9999887764       489999999999987653221100      000000000011124678999999999999754


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+.+.|.
T Consensus       222 ~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          222 AEYLTGQAVAVDGG  235 (239)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCCCCCEEEECCC
Confidence            2  24667777643

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.76  E-value=4.1e-18  Score=141.19  Aligned_cols=197  Identities=15%  Similarity=0.164  Sum_probs=130.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++||||||+|+||+++++.|+++|++|+++++....   ...+..+.+  ...++.++.+|++|.+++.++++       
T Consensus        14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSP---RRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCS---SHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999998854321   112222222  23568999999999998888876       


Q ss_pred             cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|++||+||...                   +.+    ++.++..+++.+ ..++|+ |+.......     .+...|.
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~  164 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ-----FGQTNYS  164 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSC-----SCCHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCC-----CCCcccH
Confidence            6899999999653                   233    455555556666 677776 443322211     2234455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .++++..++||.+.+........        ..............+.+++|+|++++.++.
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  236 (256)
T 3ezl_A          165 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP--------DVLEKIVATIPVRRLGSPDEIGSIVAWLAS  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH--------HHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            599998887763       57899999999987654321100        000000000112245688999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      ...  ..|+.+++.|.
T Consensus       237 ~~~~~~tG~~i~vdgG  252 (256)
T 3ezl_A          237 EESGFSTGADFSLNGG  252 (256)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             CcccCCcCcEEEECCC
Confidence            542  34677777653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.76  E-value=6.4e-18  Score=144.72  Aligned_cols=219  Identities=10%  Similarity=0.023  Sum_probs=139.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-----CCcch-hhHhhhh--cCCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-----DPVKG-KLIEIFK--NLGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+....     ..++. +..+.+.  ...+.++.+|++|.+++.++++ 
T Consensus        28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  107 (322)
T 3qlj_A           28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT  107 (322)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4699999999999999999999999999998862100     01122 2222232  3457889999999999888776 


Q ss_pred             ------cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC----C-----cceeec-cCCCCCCccC
Q 039623           73 ------QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG----N-----VKRFLP-SEFGNDVDRS  117 (292)
Q Consensus        73 ------~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~----~-----~~~~i~-s~~g~~~~~~  117 (292)
                            ++|++|||||...                   +.++..+++++.+.-    .     -.++|+ |+....... 
T Consensus       108 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-  186 (322)
T 3qlj_A          108 AVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS-  186 (322)
T ss_dssp             HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB-
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC-
Confidence                  6899999999753                   344555555554321    0     036665 442211111 


Q ss_pred             CccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccc
Q 039623          118 QNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKED  190 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  190 (292)
                          .....|..+|..++.+.+.       .|+++..|+|| +...........        .   .......+.+.+++
T Consensus       187 ----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~--------~---~~~~~~~~~~~~pe  250 (322)
T 3qlj_A          187 ----VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE--------M---MATQDQDFDAMAPE  250 (322)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------------CCTTCGG
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh--------h---hhccccccCCCCHH
Confidence                1233455599999888764       57999999998 543322211110        0   00111223456899


Q ss_pred             hHHHHHHHhhcCCc--CCCceEEEcCCCc----------------cccHHHHHHHHHHHhCCCcc
Q 039623          191 DIATYTINSIDGPR--TLNKTLYIRPPGN----------------VYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       191 D~a~~~~~~l~~~~--~~~~~~~~~~~~~----------------~~t~~e~~~~~~~~~~~~~~  237 (292)
                      |+|.+++.++....  ..|+.+++.|...                ..+..|+++.+.+.++.+.+
T Consensus       251 dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          251 NVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             GTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence            99999999997643  2467777765431                23779999999998875433

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.76  E-value=1e-17  Score=138.12  Aligned_cols=187  Identities=12%  Similarity=0.053  Sum_probs=124.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+..     +.+.        +..+.+|++|++++.++++       ++
T Consensus        16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~--------~~~~~~D~~~~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG-----APKG--------LFGVEVDVTDSDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC-----CCTT--------SEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH-----HHHH--------hcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999843     2211        1238899999998888775       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++    ++.+ ..++|+ |+.......     .+...|..+
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~s  156 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI-----GNQANYAAS  156 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----------CCHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCC-----CCChhHHHH
Confidence            99999999643                   33444455544    4455 678876 443322221     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++++++||++.+.........        .............+.+++|+|++++.++..+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  228 (247)
T 1uzm_A          157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER--------IQQGALQFIPAKRVGTPAEVAGVVSFLASED  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH--------HHHHHGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9998887764       489999999999976543211000        0000000001124689999999999999754


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+.+.|.
T Consensus       229 ~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          229 ASYISGAVIPVDGG  242 (247)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             ccCCcCCEEEECCC
Confidence            2  24677777654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.76  E-value=7.4e-18  Score=140.54  Aligned_cols=201  Identities=15%  Similarity=0.065  Sum_probs=133.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh----cCCcEEEECCCCCHHHHHHHHc---c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK----NLGVNVLYGDLQDHESLIKAIK---Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~----~~~v~~v~~D~~d~~~~~~~~~---~   73 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+. .+.+.    ...+..+.+|++|++++.++++   +
T Consensus        11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A           11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRR-----EENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            469999999999999999999999999999998     444322 22221    2357889999999999888876   6


Q ss_pred             CCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|++|||||...                   +.+    ++.+++.+++.+ ..++|. |+.......     .+...|..
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~a  159 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPS-----QEMAHYSA  159 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCC-----TTCHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCC-----CcchHHHH
Confidence            899999999754                   233    555566666666 677776 443222111     12344555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee----------ecCCCcceEEeeccchH
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT----------IFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~v~D~  192 (292)
                      +|..++.+.+.       .++++..++||.+.+..........   .......          ..........+.+++|+
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  236 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSL---YPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEI  236 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHS---STTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhc---CcccCCCHHHHHHHHhhccCCcccccCccCHHHH
Confidence            99999988774       3688999999998765432221110   0000000          00011113467899999


Q ss_pred             HHHHHHhhcCCc--CCCceEEEcCCC
Q 039623          193 ATYTINSIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       193 a~~~~~~l~~~~--~~~~~~~~~~~~  216 (292)
                      |++++.++....  ..|+.+++.|..
T Consensus       237 A~~v~fL~s~~~~~itG~~i~vdGG~  262 (267)
T 3t4x_A          237 AHLVTFLSSPLSSAINGSALRIDGGL  262 (267)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHcCccccCccCCeEEECCCc
Confidence            999999998543  347788887543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.76  E-value=7.6e-18  Score=139.41  Aligned_cols=199  Identities=10%  Similarity=0.024  Sum_probs=129.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHhhhh-cCCcEEEECCCCCH-HHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIEIFK-NLGVNVLYGDLQDH-ESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~d~-~~~~~~~~------   72 (292)
                      |+|+||||+|+||++++++|+++|++ |++++|+..   .+..+.+.... ..++.++.+|++|+ +++.++++      
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~---~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN---PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC---HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch---HHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            57999999999999999999999997 999999732   12222222221 24688999999998 77777765      


Q ss_pred             -cCCEEEEcCcCCC-----------chhHHHHHHHHHHhC------Ccceeec-cCCCCCCccCCccCCCCcchHHHHHH
Q 039623           73 -QVDVVISTVSRGQ-----------IPEQAKIIAAVKEAG------NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------~~~~~~l~~a~~~~~------~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~  133 (292)
                       ++|++||+||...           +.++.++++++.+.-      ...++|+ |+.......     .....|..+|..
T Consensus        83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sK~a  157 (254)
T 1sby_A           83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----HQVPVYSASKAA  157 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----TTSHHHHHHHHH
T ss_pred             CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----CCchHHHHHHHH
Confidence             6899999999654           556677777765432      0245665 443222111     123345559999


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCC
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTL  206 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  206 (292)
                      ++.+.+.       .++++++++||.+.+..........  ...........    ...+.+++|+|++++.++... ..
T Consensus       158 ~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~dvA~~i~~~~~~~-~~  230 (254)
T 1sby_A          158 VVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVEPRVAELLL----SHPTQTSEQCGQNFVKAIEAN-KN  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSCTTHHHHHT----TSCCEEHHHHHHHHHHHHHHC-CT
T ss_pred             HHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhh--hhhHHHHHHHh----cCCCCCHHHHHHHHHHHHHcC-CC
Confidence            9888764       5899999999999876432211100  00000000000    112348999999999998743 34


Q ss_pred             CceEEEcCC
Q 039623          207 NKTLYIRPP  215 (292)
Q Consensus       207 ~~~~~~~~~  215 (292)
                      |+.|++.|.
T Consensus       231 G~~~~v~gG  239 (254)
T 1sby_A          231 GAIWKLDLG  239 (254)
T ss_dssp             TCEEEEETT
T ss_pred             CCEEEEeCC
Confidence            677877653

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.76  E-value=1.6e-18  Score=143.49  Aligned_cols=206  Identities=13%  Similarity=0.034  Sum_probs=135.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++       ++
T Consensus         9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN-----ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            479999999999999999999999999999998     555544444345678999999999988877764       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~  133 (292)
                      |++||+||...                   +.++..+++++.+.- .-.++|. |+.......     ++...|..+|..
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~asKaa  158 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----PGMSVYSASKAA  158 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----TTBHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----CCchHHHHHHHH
Confidence            99999999754                   456667777776531 0235665 443222111     123345559999


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEeeccchHHHHHHHhhcCCc-
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATYTINSIDGPR-  204 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-  204 (292)
                      ++.+.+.       .|+++..++||.+.+..........   ..... ............+.+++|+|++++.++.... 
T Consensus       159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~  235 (255)
T 4eso_A          159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITE---AERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEATF  235 (255)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCH---HHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTCTT
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCCh---hhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcCcC
Confidence            9888764       4899999999998765422110000   00000 0000000112345688999999999987532 


Q ss_pred             CCCceEEEcCCCccccH
Q 039623          205 TLNKTLYIRPPGNVYSF  221 (292)
Q Consensus       205 ~~~~~~~~~~~~~~~t~  221 (292)
                      ..|+.+++.|.. ..++
T Consensus       236 itG~~i~vdGG~-~~~l  251 (255)
T 4eso_A          236 TTGAKLAVDGGL-GQKL  251 (255)
T ss_dssp             CCSCEEEESTTT-TTTB
T ss_pred             ccCCEEEECCCc-cccC
Confidence            246777777543 4443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.75  E-value=3.7e-17  Score=136.56  Aligned_cols=192  Identities=14%  Similarity=0.091  Sum_probs=125.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHcc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIKQ------   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~------   73 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.....  .++.++.+|++|.+++.++++.      
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRR-----EERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999998     555443322212  3788999999999999988864      


Q ss_pred             -CCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcc-eeec-cCCCCCCccCCccCCCCcc
Q 039623           74 -VDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVK-RFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        74 -~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~-~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       +|++||+||...                        +..++.++..+++.+ .. ++|. |+.......     .....
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~-----~~~~~  170 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPY-----PGSHV  170 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCC-----TTCHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCC-----CCCch
Confidence             599999998631                        223455566666666 56 7776 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |..+|..++.+.+.       .|++++.++||.+.+.........     ..... ....    ...++..+|+|++++.
T Consensus       171 Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~----~~~~~~pedvA~~v~~  241 (272)
T 2nwq_A          171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG-----DQARYDKTYA----GAHPIQPEDIAETIFW  241 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------CCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc-----chHHHHHhhc----cCCCCCHHHHHHHHHH
Confidence            55599999998874       479999999999877643211000     00000 0000    1124789999999999


Q ss_pred             hhcCCcC-CCceEEEc
Q 039623          199 SIDGPRT-LNKTLYIR  213 (292)
Q Consensus       199 ~l~~~~~-~~~~~~~~  213 (292)
                      ++..+.. .++.+.+.
T Consensus       242 l~s~~~~~~g~~i~v~  257 (272)
T 2nwq_A          242 IMNQPAHLNINSLEIM  257 (272)
T ss_dssp             HHTSCTTEEEEEEEEE
T ss_pred             HhCCCccCccceEEEe
Confidence            9986543 34445554

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.75  E-value=2.6e-17  Score=138.18  Aligned_cols=197  Identities=11%  Similarity=0.077  Sum_probs=122.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.    .++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus        30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGD----AEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC----HHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3599999999999999999999999999999742    3333222 2222  3568999999999988887776      


Q ss_pred             -cCCEEEEcCcCC--C-------------------chhHHHHHHH----HHHhCC--cceeec-cCCCCCCccCCccCCC
Q 039623           73 -QVDVVISTVSRG--Q-------------------IPEQAKIIAA----VKEAGN--VKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 -~~d~vi~~a~~~--~-------------------~~~~~~l~~a----~~~~~~--~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                       ++|++||+||..  .                   +.++..++++    +++.+.  ..++|. |+.......     ..
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----~~  180 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-----PE  180 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------C
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-----CC
Confidence             789999999972  1                   3344444444    444320  246665 443322221     12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCC-CcceEEeeccchHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGD-GNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~  195 (292)
                      ...|..+|..++.+.+.       .|+++..++||.+.+.........        ....... ......+.+++|+|++
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~p~~r~~~pedvA~~  252 (280)
T 4da9_A          181 RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK--------YDGLIESGLVPMRRWGEPEDIGNI  252 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------CCBCHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh--------HHHHHhhcCCCcCCcCCHHHHHHH
Confidence            33455599999888764       578999999999987643322111        0000111 1223456789999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++....  ..|+.+++.|.
T Consensus       253 v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          253 VAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             HHHHHTSTTGGGTTCEEEESTT
T ss_pred             HHHHhCccccCCCCCEEEECCC
Confidence            999998653  34778888754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.75  E-value=5.7e-18  Score=140.77  Aligned_cols=202  Identities=8%  Similarity=0.057  Sum_probs=131.2

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+  |+||+++++.|+++|++|++++|+     .+..+.++.+..  .++.++.+|++|++++.++++     
T Consensus         9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA-----ERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESC-----GGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            469999999  999999999999999999999998     322222222211  247899999999999888776     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                        ++|++||+||...                       +.++..+++++.+.- .-.++|+ |+.+.....     .+..
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~  158 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV-----PKYN  158 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC-----TTCH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC-----CCch
Confidence              6899999998531                       456677777776541 0136665 443222211     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|++++.++||.+.+.........      ......+........+.+++|+|++++.
T Consensus       159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~v~~  232 (261)
T 2wyu_A          159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF------TKMYDRVAQTAPLRRNITQEEVGNLGLF  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc------HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            455599999888764       389999999999987643211000      0000000000011235689999999999


Q ss_pred             hhcCCc--CCCceEEEcCCCcccc
Q 039623          199 SIDGPR--TLNKTLYIRPPGNVYS  220 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~~~~~t  220 (292)
                      ++....  ..|+.+++.|.. .++
T Consensus       233 l~s~~~~~~tG~~~~vdgG~-~~~  255 (261)
T 2wyu_A          233 LLSPLASGITGEVVYVDAGY-HIM  255 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTG-GGB
T ss_pred             HcChhhcCCCCCEEEECCCc-ccc
Confidence            997543  246778887543 443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.75  E-value=1.4e-17  Score=138.70  Aligned_cols=195  Identities=16%  Similarity=0.093  Sum_probs=128.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+...     .+        ....+.+|++|.+++.++++       ++
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~-----~~--------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   95 (266)
T 3uxy_A           29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAG-----IA--------ADLHLPGDLREAAYADGLPGAVAAGLGRL   95 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTT-----SC--------CSEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HH--------hhhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998432     11        12345899999988777664       68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                   +.++..+++++    ++.+ ..++|. |+.......     .+...|..+
T Consensus        96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  169 (266)
T 3uxy_A           96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPG-----PGHALYCLT  169 (266)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCC-----TTBHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC-----CCChHHHHH
Confidence            99999999754                   34555555555    6666 577776 443222221     123445559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||.+.+............ .................+.+++|+|++++.++...
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  248 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGF-DPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTC-CHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999888764       479999999999987643221110000 00000011112222345678999999999999865


Q ss_pred             c--CCCceEEEcCCC
Q 039623          204 R--TLNKTLYIRPPG  216 (292)
Q Consensus       204 ~--~~~~~~~~~~~~  216 (292)
                      .  ..|+.+++.|..
T Consensus       249 ~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          249 ARYLCGSLVEVNGGK  263 (266)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             hcCCcCCEEEECcCE
Confidence            3  247788887543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.75  E-value=1.1e-17  Score=140.64  Aligned_cols=197  Identities=11%  Similarity=0.099  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc------cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK------QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d   75 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++      ++|
T Consensus        31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLA-----AEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            469999999999999999999999999999998     666554444446679999999999999988876      589


Q ss_pred             EEEEc-CcCCC------------------------chhHHHHHHHHHHhC---------Ccceeec-cCCCCCCccCCcc
Q 039623           76 VVIST-VSRGQ------------------------IPEQAKIIAAVKEAG---------NVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        76 ~vi~~-a~~~~------------------------~~~~~~l~~a~~~~~---------~~~~~i~-s~~g~~~~~~~~~  120 (292)
                      ++||+ ++...                        +.++.++++++...-         .-.++|. |+.......    
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  181 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ----  181 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC----
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC----
Confidence            99999 44321                        334555555554221         1346665 443222111    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce-EEeeccchH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG-AVYNKEDDI  192 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~  192 (292)
                       .....|..+|..++.+.+.       .|+++..++||.+.+.........        ....+...... ..+.+++|+
T Consensus       182 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~~pedv  252 (281)
T 3ppi_A          182 -IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEE--------ALAKFAANIPFPKRLGTPDEF  252 (281)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHH--------HHHHHHHTCCSSSSCBCHHHH
T ss_pred             -CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHH--------HHHHHHhcCCCCCCCCCHHHH
Confidence             1233455599998887763       479999999999876543221100        00000000111 346789999


Q ss_pred             HHHHHHhhcCCcCCCceEEEcCCC
Q 039623          193 ATYTINSIDGPRTLNKTLYIRPPG  216 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~~~~~~~~~  216 (292)
                      |++++.++.+....|+.+++.|..
T Consensus       253 A~~v~~l~s~~~~tG~~i~vdGG~  276 (281)
T 3ppi_A          253 ADAAAFLLTNGYINGEVMRLDGAQ  276 (281)
T ss_dssp             HHHHHHHHHCSSCCSCEEEESTTC
T ss_pred             HHHHHHHHcCCCcCCcEEEECCCc
Confidence            999999998765567788887544

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.75  E-value=2.1e-17  Score=137.55  Aligned_cols=202  Identities=13%  Similarity=0.091  Sum_probs=131.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.  ..++.++.+|++|++++.++++      
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A           12 KVVVISGVGPALGTTLARRCAEQGADLVLAART-----VERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999998     55443332 222  3578999999999999888775      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++||+||...                    +.++..+++++.    +.+  .++|. |+.......     .....
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~  159 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHSQ-----AKYGA  159 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCCC-----TTCHH
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccCC-----CccHH
Confidence             6899999998642                    344555555543    333  46665 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCC--CCCCC-CCceeecCCCcceEEeeccchHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG--APAPP-REKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      |..+|..++.+.+.       .|+++..++||.+.+..........  ..... ...............+.+++|+|+++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  239 (264)
T 3ucx_A          160 YKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAI  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHH
Confidence            55599998888763       5799999999999765432211000  00000 00001111222234567999999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++....  ..|+.+++.|.
T Consensus       240 ~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          240 LFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHcCccccCCCCCEEEECCC
Confidence            99997643  34778888754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.75  E-value=6.9e-17  Score=134.86  Aligned_cols=196  Identities=14%  Similarity=0.127  Sum_probs=131.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.    .++.+.+ +.+.  ...+.++.+|++|++++.++++      
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA----AERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999997763    2333222 2222  4568899999999999888876      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cC-CCCCCccCCccCCCCcchHH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SE-FGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~  129 (292)
                       ++|++||+||...                   +.++..+++++.+.= .-.++|. |+ .+.....     .+...|..
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~-----~~~~~Y~a  182 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW-----PGISLYSA  182 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCS-----TTCHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCC-----CCchHHHH
Confidence             6899999999753                   456777777777651 1346665 33 3322211     12344555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..++||.+.+........         .............+..++|+|++++.++..
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---------~~~~~~~~~~~~r~~~pedvA~~v~fL~s~  253 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD---------HAEAQRERIATGSYGEPQDIAGLVAWLAGP  253 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS---------SHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch---------hHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            99999888763       48999999999998764322100         000000011122457889999999999975


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      ..  ..|+.+.+.|.
T Consensus       254 ~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          254 QGKFVTGASLTIDGG  268 (271)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             ccCCccCCEEEeCcC
Confidence            42  34777877653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.75  E-value=7e-18  Score=140.30  Aligned_cols=196  Identities=10%  Similarity=0.046  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||+|+||+++++.|.++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++       .+
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998     555433322223568899999999998888775       47


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~  133 (292)
                      |++||+||...                   +.++..+++++.+.- +..++|+ |+.... ..     .....|..+|..
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~-----~~~~~Y~asK~a  155 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA-----FGLAHYAAGKLG  155 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH-----HHHHHHHHCSSH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC-----CCcHHHHHHHHH
Confidence            99999999643                   446667777776642 1246665 443322 21     112344449998


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--  204 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--  204 (292)
                      ++.+.+.       .|+++++++||.+.+........        ..............+.+++|+|++++.++..+.  
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~  227 (263)
T 2a4k_A          156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP--------WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAY  227 (263)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH--------HHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            8877763       47999999999998764322100        000000000111246789999999999997643  


Q ss_pred             CCCceEEEcCCC
Q 039623          205 TLNKTLYIRPPG  216 (292)
Q Consensus       205 ~~~~~~~~~~~~  216 (292)
                      ..|+.+.+.|..
T Consensus       228 ~tG~~i~vdgG~  239 (263)
T 2a4k_A          228 ITGQALYVDGGR  239 (263)
T ss_dssp             CCSCEEEESTTT
T ss_pred             CcCCEEEECCCc
Confidence            346777777543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.75  E-value=5.3e-17  Score=135.25  Aligned_cols=173  Identities=13%  Similarity=0.099  Sum_probs=120.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC---CCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc---
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG---HPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      |++|+||||+|+||+++++.|+++|   ++|++++|+.     ++.+.++.+.  ..++.++.+|++|.+++.++++   
T Consensus        21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~-----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR-----EQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT-----TSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh-----hhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            4689999999999999999999999   9999999984     3333333332  3578999999999988888876   


Q ss_pred             ------cCCEEEEcCcCCC--------------------chhHHHHHHHHHHh----------CC----cceeec-cCCC
Q 039623           73 ------QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEA----------GN----VKRFLP-SEFG  111 (292)
Q Consensus        73 ------~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~----------~~----~~~~i~-s~~g  111 (292)
                            ++|+|||+||...                    +.++..+++++.+.          +.    ..++|+ |+..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence                  6999999998532                    34555565555433          10    245665 4432


Q ss_pred             CCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceE
Q 039623          112 NDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGA  184 (292)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (292)
                      .....  .+..+...|..+|..++.+.+.       .+++++++|||++.+....           .            .
T Consensus       176 ~~~~~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~------------~  230 (267)
T 1sny_A          176 GSIQG--NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG-----------S------------S  230 (267)
T ss_dssp             GCSTT--CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC-----------T------------T
T ss_pred             ccccC--CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC-----------C------------C
Confidence            21111  0111234555599999888764       4899999999988654321           0            0


Q ss_pred             EeeccchHHHHHHHhhcCC
Q 039623          185 VYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       185 ~~i~v~D~a~~~~~~l~~~  203 (292)
                      .+.+.+|+|+.++.++...
T Consensus       231 ~~~~~~~~a~~~~~~~~~~  249 (267)
T 1sny_A          231 APLDVPTSTGQIVQTISKL  249 (267)
T ss_dssp             CSBCHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHhc
Confidence            2367799999999999754

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.75  E-value=9.8e-18  Score=139.01  Aligned_cols=193  Identities=12%  Similarity=0.124  Sum_probs=129.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc------cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK------QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d   75 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .++.   .......+.++.+|++|.+++.++++      ++|
T Consensus        10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A           10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR-----GEDV---VADLGDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS-----CHHH---HHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc-----hHHH---HHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            569999999999999999999999999999996     3222   11225678999999999999888876      799


Q ss_pred             EEEEcCcCCC-----------------------chhHHHHHHHHHHhC-----------Ccceeec-cCCCCCCccCCcc
Q 039623           76 VVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-----------NVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        76 ~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-----------~~~~~i~-s~~g~~~~~~~~~  120 (292)
                      ++|||||...                       +.++..+++++.+.-           .-.++|. |+.......    
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  157 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ----  157 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH----
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC----
Confidence            9999999531                       345555666655431           1245665 443322221    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce-EEeeccchH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG-AVYNKEDDI  192 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~  192 (292)
                       .+...|..+|..++.+.+.       .|+++..++||.+.+.........        ........... ..+.+++|+
T Consensus       158 -~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~r~~~p~dv  228 (257)
T 3tl3_A          158 -IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE--------ARASLGKQVPHPSRLGNPDEY  228 (257)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH--------HHHHHHHTSSSSCSCBCHHHH
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH--------HHHHHHhcCCCCCCccCHHHH
Confidence             1223455599998887763       579999999999876643221100        00000000111 346789999


Q ss_pred             HHHHHHhhcCCcCCCceEEEcCC
Q 039623          193 ATYTINSIDGPRTLNKTLYIRPP  215 (292)
Q Consensus       193 a~~~~~~l~~~~~~~~~~~~~~~  215 (292)
                      |++++.+++++...|+.+++.|.
T Consensus       229 a~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tl3_A          229 GALAVHIIENPMLNGEVIRLDGA  251 (257)
T ss_dssp             HHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHHhcCCCCCCCEEEECCC
Confidence            99999999876556788888754

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.75  E-value=6.7e-17  Score=132.14  Aligned_cols=187  Identities=14%  Similarity=0.136  Sum_probs=126.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------c
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------Q   73 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~   73 (292)
                      -|+|+||||++.||+++++.|.++|++|.+.+|+     .++.+.+.. ...++..+.+|++|++++.++++       +
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID-----EKRSADFAK-ERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHT-TCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH-hcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            0569999999999999999999999999999998     555433322 24578899999999988887764       6


Q ss_pred             CCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcc-h
Q 039623           74 VDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKS-A  127 (292)
Q Consensus        74 ~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~-~  127 (292)
                      +|++||+||...                       +..++.++..+++.+  .++|.  |..+.. ..      |... |
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~~-~~------~~~~~Y  146 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAFQ-SE------PDSEAY  146 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGTS-CC------TTCHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeeccccc-CC------CCCHHH
Confidence            899999998765                       334455555555544  55654  433322 21      2334 4


Q ss_pred             HHHHHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          128 YADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       128 ~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      ..+|..+..+.+.      .++++..|.||++-......+...        .....    ....+...+|+|.+++.++.
T Consensus       147 ~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~--------~~~~~----Pl~R~g~pediA~~v~fL~s  214 (247)
T 3ged_A          147 ASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQE--------DCAAI----PAGKVGTPKDISNMVLFLCQ  214 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHH--------HHHTS----TTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHH--------HHhcC----CCCCCcCHHHHHHHHHHHHh
Confidence            4499998887764      478888888988754322211110        00000    11234678999999999998


Q ss_pred             CCcCCCceEEEcC
Q 039623          202 GPRTLNKTLYIRP  214 (292)
Q Consensus       202 ~~~~~~~~~~~~~  214 (292)
                      +.-..|+.+.+.|
T Consensus       215 ~~~iTG~~i~VDG  227 (247)
T 3ged_A          215 QDFITGETIIVDG  227 (247)
T ss_dssp             CSSCCSCEEEEST
T ss_pred             CCCCCCCeEEECc
Confidence            6444577777764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.74  E-value=1.8e-17  Score=138.85  Aligned_cols=194  Identities=16%  Similarity=0.065  Sum_probs=128.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEec-CCCCCCCcchhhHh-hhh---cCCcEEEECCCCCH----HHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVR-ESTASDPVKGKLIE-IFK---NLGVNVLYGDLQDH----ESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~---~~~v~~v~~D~~d~----~~~~~~~~   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++| +     .++.+.+. .+.   ..++.++.+|++|.    +++.++++
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS-----EGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-----hHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            46999999999999999999999999999999 6     44433222 221   45689999999999    88887775


Q ss_pred             -------cCCEEEEcCcCCC------------------------------chhHHHHHHHHHHh---CCc------ceee
Q 039623           73 -------QVDVVISTVSRGQ------------------------------IPEQAKIIAAVKEA---GNV------KRFL  106 (292)
Q Consensus        73 -------~~d~vi~~a~~~~------------------------------~~~~~~l~~a~~~~---~~~------~~~i  106 (292)
                             ++|++|||||...                              +.++..+++++.+.   + .      .++|
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~~~~g~iv  165 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG-GAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcC-CCCCCCCcEEE
Confidence                   6899999999632                              23445666776653   2 3      6777


Q ss_pred             c-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecC
Q 039623          107 P-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFG  178 (292)
Q Consensus       107 ~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (292)
                      + |+.......     .+...|..+|..++.+.+.       .|++++.++||.+.+. . .....    . ...  ...
T Consensus       166 ~isS~~~~~~~-----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~----~-~~~--~~~  231 (276)
T 1mxh_A          166 NLCDAMTDLPL-----PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQE----T-QEE--YRR  231 (276)
T ss_dssp             EECCGGGGSCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHH----H-HHH--HHT
T ss_pred             EECchhhcCCC-----CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHH----H-HHH--HHh
Confidence            6 443221111     1233455599999888764       4899999999999766 1 11000    0 000  000


Q ss_pred             CCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          179 DGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       179 ~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      .....+++.+++|+|++++.++..+.  ..|+.+++.|.
T Consensus       232 ~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          232 KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            00001126889999999999997543  24677777643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.74  E-value=5.9e-18  Score=139.23  Aligned_cols=196  Identities=14%  Similarity=0.074  Sum_probs=130.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHh-CCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-----cC
Q 039623            1 MAATLIIGGTGYIGKKILEASVK-AGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-----QV   74 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-----~~   74 (292)
                      ||+++||||+|+||+++++.|++ .|+.|.+.+|+....            ...+.++.+|++|.+++.++++     ++
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i   71 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDIIKNVSF   71 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999 789999999874311            2356899999999999988886     68


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHHhCCc--ceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNV--KRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~--~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      |++||+||...                   +.++..+++++.+.- .  .++|+ |+.......     +....|..+|.
T Consensus        72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~-----~~~~~Y~asKa  145 (244)
T 4e4y_A           72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQCFIAK-----PNSFAYTLSKG  145 (244)
T ss_dssp             EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGGGTCCC-----TTBHHHHHHHH
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHHHccCC-----CCCchhHHHHH
Confidence            99999999743                   456677777766542 2  25665 433222111     12334555999


Q ss_pred             HHHHHHHH-------cCccEEEEecceeccccccccccCCC---CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          133 KIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGA---PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       133 ~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      .++.+.+.       .|+++..++||.+.+...........   .....+.............+.+++|+|++++.++..
T Consensus       146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~  225 (244)
T 4e4y_A          146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcC
Confidence            99888763       58999999999998764322110000   000000000011111223467899999999999976


Q ss_pred             Cc--CCCceEEEcC
Q 039623          203 PR--TLNKTLYIRP  214 (292)
Q Consensus       203 ~~--~~~~~~~~~~  214 (292)
                      +.  ..|+.+++.|
T Consensus       226 ~~~~itG~~i~vdG  239 (244)
T 4e4y_A          226 KSKFMTGGLIPIDG  239 (244)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             ccccccCCeEeECC
Confidence            43  3477777764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.74  E-value=3.3e-17  Score=134.99  Aligned_cols=184  Identities=16%  Similarity=0.141  Sum_probs=122.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     +++.+.+. .+.  ..++.++.+|++|++++.++++      
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAARR-----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     55443322 222  3468899999999998887775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                   +.++..+++++.    +.+  .++|. |+.......     .....|
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~Y  155 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNV-----RNAAVY  155 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCCC-----TTCHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCCC-----CCCcHH
Confidence             6999999999642                   344555555544    333  56765 443222111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|++++.++||++.+.........    .......... +  .+.+++.+|+|++++.++
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~-~--~~~~~~pedvA~~v~~l~  228 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT----ATKEMYEQRI-S--QIRKLQAQDIAEAVRYAV  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH----HHHHHHHHHT-T--TSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch----hhHHHHHhcc-c--ccCCCCHHHHHHHHHHHh
Confidence            5599998877663       589999999999977643221100    0000000000 1  111478999999999999


Q ss_pred             cCCc
Q 039623          201 DGPR  204 (292)
Q Consensus       201 ~~~~  204 (292)
                      .++.
T Consensus       229 s~~~  232 (247)
T 2jah_A          229 TAPH  232 (247)
T ss_dssp             HSCT
T ss_pred             CCCc
Confidence            8653

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.74  E-value=2.6e-18  Score=144.02  Aligned_cols=198  Identities=12%  Similarity=0.058  Sum_probs=129.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.. +.+   ...++.++.+|++|.+++.++++     
T Consensus        28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS-----LPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     4443222 222   24678999999999998888775     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++|||||...                   +.++.++++++.    +.+ ..++|+ |+.......     .....
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  176 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQ-----ALQVH  176 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTC-----TTCHH
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC-----CCcHH
Confidence              6899999999543                   445556666553    333 456765 432211111     12234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .|+++..++||++.+.........     ................+.+++|+|++++.+
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL  251 (277)
T 4fc7_A          177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG-----PQASLSTKVTASPLQRLGNKTEIAHSVLYL  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC-----CHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC-----CHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            44599999888764       479999999999976421110000     000000000111123457899999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +....  ..|+.+++.|.
T Consensus       252 ~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          252 ASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             cCCccCCcCCCEEEECCC
Confidence            97543  34777777654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.74  E-value=4.3e-17  Score=135.27  Aligned_cols=198  Identities=11%  Similarity=0.030  Sum_probs=126.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++++.    .++.+ ..+.+.  ..++.++.+|++|.+++.++++      
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGA----AEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSS----CHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4799999999999999999999999999986553    23222 222222  3568999999999999888876      


Q ss_pred             -cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhCCcc--eeec-cC-CCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAGNVK--RFLP-SE-FGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~~~~--~~i~-s~-~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                    +.++..+++++.+.- .+  ++|. |+ .+....     ......|
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~-----~~~~~~Y  158 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGGAIVTFSSQAGRDGG-----GPGALAY  158 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECCHHHHHCC-----STTCHHH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEcCHHhccCC-----CCCcHHH
Confidence             6899999998651                    556777777776653 22  5665 43 221011     1123345


Q ss_pred             HHHHHHHHHHHHH------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          128 YADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       128 ~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      ..+|..++.+.+.      .++++..+.||.+.+.........       .....+........+.+++|+|++++.++.
T Consensus       159 ~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~p~~r~~~pedva~~v~~L~s  231 (259)
T 3edm_A          159 ATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKP-------EVRERVAGATSLKREGSSEDVAGLVAFLAS  231 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------CCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccCh-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            5599999888764      237888889998876643322111       111111222234456789999999999997


Q ss_pred             CCc--CCCceEEEcCCC
Q 039623          202 GPR--TLNKTLYIRPPG  216 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~~  216 (292)
                      ...  ..|+.+++.|..
T Consensus       232 ~~~~~itG~~i~vdGg~  248 (259)
T 3edm_A          232 DDAAYVTGACYDINGGV  248 (259)
T ss_dssp             GGGTTCCSCEEEESBCS
T ss_pred             ccccCccCCEEEECCCc
Confidence            653  247788887644

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.74  E-value=4.3e-17  Score=134.53  Aligned_cols=176  Identities=14%  Similarity=0.068  Sum_probs=121.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh----c-CCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK----N-LGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~----~-~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .++.+.+.. +.    . .++.++.+|++|.+++.++++   
T Consensus         8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARS-----KQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC-----HHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            469999999999999999999999999999998     554433222 11    2 578899999999998888775   


Q ss_pred             ----cCCEEEEcCcCCC------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ----QVDVVISTVSRGQ------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ----~~d~vi~~a~~~~------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                          ++|++||+||...                  +.++..++++    +++.+ ..++|. |+.......     .+..
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~  156 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGF-----ADGG  156 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC------------CCTT
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCC-----CCCc
Confidence                5899999999743                  3334444444    45555 567775 443322211     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++..++||++.+.........                .....+++++|+|++++.
T Consensus       157 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----------------~~~~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP----------------FKDEEMIQPDDLLNTIRC  220 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC----------------SCGGGSBCHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC----------------cccccCCCHHHHHHHHHH
Confidence            555599998888764       479999999999876543221110                011236789999999999


Q ss_pred             hhcCCc
Q 039623          199 SIDGPR  204 (292)
Q Consensus       199 ~l~~~~  204 (292)
                      ++..+.
T Consensus       221 l~s~~~  226 (250)
T 3nyw_A          221 LLNLSE  226 (250)
T ss_dssp             HHTSCT
T ss_pred             HHcCCC
Confidence            998654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.74  E-value=6.3e-17  Score=133.74  Aligned_cols=192  Identities=12%  Similarity=0.062  Sum_probs=127.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h---hcCCcEEEECCC--CCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F---KNLGVNVLYGDL--QDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~v~~v~~D~--~d~~~~~~~~~---   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +   ....+.++.+|+  +|.+++.++++   
T Consensus        13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A           13 RIILVTGASDGIGREAAMTYARYGATVILLGRN-----EEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            479999999999999999999999999999998     554433222 2   233789999999  88888877765   


Q ss_pred             ----cCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCC
Q 039623           73 ----QVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ----~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                          ++|++||+||...                    +.++..+++++    ++.+ ..++|. |+.......     ..
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~  161 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGR-----AN  161 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCC-----TT
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCC-----CC
Confidence                6899999999632                    34455555554    4455 567776 443222111     12


Q ss_pred             CcchHHHHHHHHHHHHH----c--CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA----E--GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~----~--~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ...|..+|..++.+.+.    .  .+++..+.||++...........       ..         ...+.+++|+|.+++
T Consensus       162 ~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~-------~~---------~~~~~~p~dva~~~~  225 (252)
T 3f1l_A          162 WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPT-------ED---------PQKLKTPADIMPLYL  225 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTT-------CC---------GGGSBCTGGGHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCc-------cc---------hhccCCHHHHHHHHH
Confidence            33455599999888764    2  37788888988876543221110       00         113568899999999


Q ss_pred             HhhcCCc--CCCceEEEcCCCccccH
Q 039623          198 NSIDGPR--TLNKTLYIRPPGNVYSF  221 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~~~~~t~  221 (292)
                      .++....  ..|+.+.+.|.. ..++
T Consensus       226 ~L~s~~~~~itG~~i~vdgG~-~~~~  250 (252)
T 3f1l_A          226 WLMGDDSRRKTGMTFDAQPGR-KPGI  250 (252)
T ss_dssp             HHHSGGGTTCCSCEEESSCC------
T ss_pred             HHcCccccCCCCCEEEeCCCc-CCCC
Confidence            9997653  346777776544 4443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.74  E-value=3.9e-17  Score=137.34  Aligned_cols=204  Identities=12%  Similarity=0.069  Sum_probs=133.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc-hhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVK-GKL-IEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++ .+. .+.+.  ..++.++.+|++|.+++.++++     
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYAN-----STESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----chHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     322 221 12222  3468899999999988877764     


Q ss_pred             --cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 --QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 --~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                        ++|++||+||...                   +.++..+++++.+.  + ..++|+ |+.......    ..+...|.
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~~Y~  179 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKA----VPKHAVYS  179 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSS----CSSCHHHH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCC----CCCCcchH
Confidence              6899999999653                   56777788888776  4 467776 443221111    01133455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCC---CCCceeecCC--CcceEEeeccchHHHHH
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAP---PREKVTIFGD--GNAGAVYNKEDDIATYT  196 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~i~v~D~a~~~  196 (292)
                      .+|..++.+.+.       .|+++++++||.+.+..............   .......+..  ......+.+++|+|+++
T Consensus       180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  259 (283)
T 1g0o_A          180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV  259 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHH
Confidence            599999888763       48999999999998764322111000000   0000000000  11123467899999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++....  ..|+.+.+.|.
T Consensus       260 ~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          260 CFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCccccCcCCCEEEeCCC
Confidence            99997643  34677777643

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.73  E-value=5.1e-17  Score=136.40  Aligned_cols=185  Identities=14%  Similarity=0.116  Sum_probs=120.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+   ....+.++.+|++|++++.++++     
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRR-----PDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            469999999999999999999999999999998     44443222 12   12335899999999998888775     


Q ss_pred             --cCCEEEEcCcCCC--------------------chh----HHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCC
Q 039623           73 --QVDVVISTVSRGQ--------------------IPE----QAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 --~~d~vi~~a~~~~--------------------~~~----~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                        ++|++|||||...                    +.+    ++.++..+++.+ .-.++|. |+.......     .+.
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----~~~  183 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR-----PNS  183 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC-----TTC
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC-----CCC
Confidence              5799999999642                    233    444444444442 1256765 443322221     123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .++++..++||.+.+.........         ............+++++|+|++++
T Consensus       184 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~~~~pedvA~~v~  254 (281)
T 4dry_A          184 APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG---------VLQANGEVAAEPTIPIEHIAEAVV  254 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE---------EECTTSCEEECCCBCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch---------hhhhhhcccccCCCCHHHHHHHHH
Confidence            4455599998888764       579999999999876643222110         000001111234678999999999


Q ss_pred             HhhcCCcC
Q 039623          198 NSIDGPRT  205 (292)
Q Consensus       198 ~~l~~~~~  205 (292)
                      .++..+..
T Consensus       255 fL~s~~~~  262 (281)
T 4dry_A          255 YMASLPLS  262 (281)
T ss_dssp             HHHHSCTT
T ss_pred             HHhCCCcc
Confidence            99987653

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.73  E-value=7e-18  Score=139.63  Aligned_cols=202  Identities=13%  Similarity=0.055  Sum_probs=119.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHH----HccC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKA----IKQV   74 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~----~~~~   74 (292)
                      ||+++||||+|+||+++++.|+++|++|++++|+     .++.+.+..+.  ...+..+  |..+.+.+.+.    +.++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDES-----FKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGG-----GGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCC
Confidence            7889999999999999999999999999999998     44443333232  2233333  66554433322    2379


Q ss_pred             CEEEEcCcCC-C-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRG-Q-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~-~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++||+||.. .                   +.++..++++    +++.+ ..++|. |+.......     .....|..
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~~  147 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW-----KELSTYTS  147 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC-----TTCHHHHH
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCC-----CCchHHHH
Confidence            9999999976 2                   2334444444    44555 567776 443322221     12334555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .+++++.++||.+.+.....+...............+........+.+++|+|++++.++..
T Consensus       148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~  227 (254)
T 1zmt_A          148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999888764       48999999999995432211110000000000000000000112357899999999999986


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      +.  ..|+.+.+.|.
T Consensus       228 ~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          228 SCDYLTGQVFWLAGG  242 (254)
T ss_dssp             SCGGGTTCEEEESTT
T ss_pred             ccCCccCCEEEECCC
Confidence            43  24677777653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.73  E-value=3.7e-17  Score=136.18  Aligned_cols=198  Identities=8%  Similarity=0.049  Sum_probs=129.8

Q ss_pred             ceEEEEccCCc--chHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGY--IGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      ++++||||+|+  ||+++++.|+++|++|++++|+     ....+.++.+    ...++.++.+|++|.+++.++++   
T Consensus         8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG-----ERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc-----hHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            47999999988  9999999999999999999997     3333333332    22379999999999998888775   


Q ss_pred             ----cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCC
Q 039623           73 ----QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ----~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                          .+|++||+||...                       +.++..+++++.+.- .-.++|. |+.......     +.
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  157 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM-----PN  157 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC-----TT
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC-----CC
Confidence                5899999998641                       345666777776542 0135665 433222211     12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|..+|..++.+.+.       .|+++..++||.+.+.........      ...............+.+++|+|+++
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~p~dva~~v  231 (266)
T 3oig_A          158 YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF------NSILKDIEERAPLRRTTTPEEVGDTA  231 (266)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch------HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            33455599999888763       479999999999876533211100      00000000001112457889999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++....  ..|+.+++.|.
T Consensus       232 ~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          232 AFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHcCCchhcCcCCEEEECCC
Confidence            99998643  35777777653

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.73  E-value=3.4e-17  Score=136.15  Aligned_cols=202  Identities=13%  Similarity=0.104  Sum_probs=127.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     .++.+.+. .+.  ..++.++.+|++|++++.++++      
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     54443322 222  3468899999999998877765      


Q ss_pred             -cCCEEEEcCcCC-C-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRG-Q-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~-~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++||+||.. .                   +.++..++++    +++.+ ..++|+ |+.......     .....
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  156 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP-----PNMAA  156 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC-----TTBHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC-----CCCch
Confidence             689999999865 1                   3344444444    44445 577776 442211111     11234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccc----c-CCCCCCC-CCc-e-eecCCCcceEEeeccch
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLA----Q-IGAPAPP-REK-V-TIFGDGNAGAVYNKEDD  191 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~----~-~~~~~~~-~~~-~-~~~~~~~~~~~~i~v~D  191 (292)
                      |..+|..++.+.+.       .|++++.++||++.+.......    . ....... ... . ..+........+...+|
T Consensus       157 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  236 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINE  236 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHH
Confidence            55599998877763       4899999999998766432210    0 0000000 000 0 00000011123578999


Q ss_pred             HHHHHHHhhcCCc--CCCceEEEcC
Q 039623          192 IATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       192 ~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +|++++.++....  ..|+.+.+.|
T Consensus       237 vA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          237 IPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             SHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             HHHHHHHHcCchhcCcCCcEEecCC
Confidence            9999999997542  2456666653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.73  E-value=3.6e-17  Score=137.28  Aligned_cols=203  Identities=13%  Similarity=0.106  Sum_probs=129.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhc--C---CcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKN--L---GVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~--~---~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+..  .   ++.++.+|++|++++.++++   
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     5544332 22221  1   68899999999998888775   


Q ss_pred             ----cCCEEEEcCcCCC-----------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCcc
Q 039623           73 ----QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        73 ----~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                          ++|++||+||...                       +.++..+++++.+    .+  .++|. |+.......    
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~----  155 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQA----  155 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSC----
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCC----
Confidence                6899999998531                       3445555555543    33  56665 443211110    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCC-CCceeecCCCcceEEeeccchH
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPP-REKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                      ..+...|..+|..++.+.+.       .|++++.++||++.+............... ...............+.+++|+
T Consensus       156 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedv  235 (280)
T 1xkq_A          156 QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHI  235 (280)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHH
Confidence            01233455599999888764       489999999999987643221000000000 0000000000112246899999


Q ss_pred             HHHHHHhhcCC---cCCCceEEEcCC
Q 039623          193 ATYTINSIDGP---RTLNKTLYIRPP  215 (292)
Q Consensus       193 a~~~~~~l~~~---~~~~~~~~~~~~  215 (292)
                      |++++.++..+   ...|+.+++.|.
T Consensus       236 A~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          236 ANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             HHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHhcCcccccCccCCeEEECCC
Confidence            99999999754   234677777654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.73  E-value=1.6e-17  Score=138.64  Aligned_cols=209  Identities=12%  Similarity=0.122  Sum_probs=132.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     +++.+.+... ..++.++.+|++|++++.++++       ++
T Consensus        10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A           10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHH-hcCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            479999999999999999999999999999998     5544333222 1358899999999999888775       68


Q ss_pred             CEEEEcCcCCC--------------------chhHHHHHHHHHHh---CCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ--------------------IPEQAKIIAAVKEA---GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~--------------------~~~~~~l~~a~~~~---~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||||...                    +.++..+++++.+.   + ..++|+ |+.......     .....|..+
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~as  157 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ-----AQAVPYVAT  157 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC-----TTCHHHHHH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC-----CCCcccHHH
Confidence            99999998632                    34455555655431   2 356665 442211111     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCC-ceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      |..++.+.+.       .|+++++++||++.+..........   .... .............+.+.+|+|++++.++.+
T Consensus       158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~  234 (270)
T 1yde_A          158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM---PDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE  234 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS---SSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcc---cchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc
Confidence            9999888764       5899999999999876432211100   0000 000000000112356889999999999875


Q ss_pred             Cc-CCCceEEEcCCCccccHHHHHH
Q 039623          203 PR-TLNKTLYIRPPGNVYSFNELVT  226 (292)
Q Consensus       203 ~~-~~~~~~~~~~~~~~~t~~e~~~  226 (292)
                      .. ..|+.+.+.|.. .+.+.+...
T Consensus       235 ~~~itG~~i~vdGG~-~~~~~~~~~  258 (270)
T 1yde_A          235 ANFCTGIELLVTGGA-ELGYGCKAS  258 (270)
T ss_dssp             CTTCCSCEEEESTTT-TSCC-----
T ss_pred             CCCcCCCEEEECCCe-ecccCcCcc
Confidence            32 346788887654 555444433

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.73  E-value=3.2e-17  Score=137.97  Aligned_cols=198  Identities=10%  Similarity=0.028  Sum_probs=129.0

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+  |+||+++++.|+++|++|++++|+     .+..+.++.+..  .++.++.+|++|.+++.++++     
T Consensus        22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYAT-----PKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            469999999  999999999999999999999998     322222232211  247899999999999888775     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCC
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                        ++|++||+||...                       +.++..+++++.+.-  .-.++|+ |+.+.....     .+.
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  171 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV-----PHY  171 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC-----TTT
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC-----CCc
Confidence              6899999998531                       456667777776542  0256776 443222111     123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .|++++.++||.+.+.........      ...............+.+++|+|++++
T Consensus       172 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~~~  245 (285)
T 2p91_A          172 NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF------HLLMEHTTKVNPFGKPITIEDVGDTAV  245 (285)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch------HHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            3455599999888763       489999999999987642211000      000000000001123578999999999


Q ss_pred             HhhcCCc--CCCceEEEcCC
Q 039623          198 NSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~  215 (292)
                      .++....  ..|+.+++.|.
T Consensus       246 ~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          246 FLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             HHTSGGGTTCCSCEEEESTT
T ss_pred             HHcCCcccCCCCCEEEECCC
Confidence            9997532  24677777654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.73  E-value=2.3e-17  Score=137.89  Aligned_cols=175  Identities=13%  Similarity=0.084  Sum_probs=123.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHh-CCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            1 MAATLIIGGTGYIGKKILEASVK-AGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      +++|+||||+|+||+++++.|++ .|++|++++|+     .++.+.. +.+.  ..++.++.+|++|.+++.++++    
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD-----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS-----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCC-----hHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999 99999999998     4443222 2222  3468999999999999888876    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCc--c----------
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVD--R----------  116 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~--~----------  116 (292)
                         ++|+|||+||...                   +.++.++++++.+.- ...++|+ |+......  .          
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence               7999999998652                   456777888887652 0136665 43211000  0          


Q ss_pred             ------------------------CCccCCCCcchHHHHHHHHHHHHH-----------cCccEEEEecceecccccccc
Q 039623          117 ------------------------SQNVVEPAKSAYADKIKIRRAIEA-----------EGIQYTYVSCNCFAGYFLPTL  161 (292)
Q Consensus       117 ------------------------~~~~~~~~~~~~~~K~~~e~~~~~-----------~~~~~~~ir~~~~~~~~~~~~  161 (292)
                                              ...+..|...|..+|..++.+++.           .+++++.++||++.+....  
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~--  236 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG--  236 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC--
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC--
Confidence                                    000112334555599998887753           3799999999988755321  


Q ss_pred             ccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          162 AQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                               .            ..+.+++|+|++++.++..+
T Consensus       237 ---------~------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          237 ---------P------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ---------T------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ---------c------------cccCChhHhhhhHhhhhcCc
Confidence                     0            12578999999999999754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.73  E-value=1.6e-16  Score=133.68  Aligned_cols=208  Identities=14%  Similarity=0.077  Sum_probs=130.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC-----------CCCcchhhHh-hh--hcCCcEEEECCCCCHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA-----------SDPVKGKLIE-IF--KNLGVNVLYGDLQDHESL   67 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~~~~~~~~~-~~--~~~~v~~v~~D~~d~~~~   67 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+...           .+.++.+.+. .+  ...++.++.+|++|++++
T Consensus        12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   91 (286)
T 3uve_A           12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL   91 (286)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence            479999999999999999999999999999987321           1122222221 11  134689999999999998


Q ss_pred             HHHHc-------cCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCc
Q 039623           68 IKAIK-------QVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVD  115 (292)
Q Consensus        68 ~~~~~-------~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~  115 (292)
                      .++++       ++|++|||||...                    +.++..+++++    ++.+.-.++|. |+......
T Consensus        92 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  171 (286)
T 3uve_A           92 KAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA  171 (286)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC
Confidence            88775       6899999999632                    33444455544    33331246665 44322222


Q ss_pred             cCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceecccccccccc--CCCCCCCCCce----e--ecCCC
Q 039623          116 RSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ--IGAPAPPREKV----T--IFGDG  180 (292)
Q Consensus       116 ~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~--~~~~~~~~~~~----~--~~~~~  180 (292)
                      .     .....|..+|..++.+.+.       .|+++..++||++.+........  ...........    .  .....
T Consensus       172 ~-----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T 3uve_A          172 Y-----PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT  246 (286)
T ss_dssp             C-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCS
T ss_pred             C-----CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhc
Confidence            1     1233455599998888764       57999999999998764321100  00000000000    0  01111


Q ss_pred             cceEEeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          181 NAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       181 ~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      . ...+.+++|+|++++.++....  ..|+.+++.|.
T Consensus       247 ~-p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          247 L-PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             S-SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-CCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence            1 1456899999999999997643  34778888753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.73  E-value=2.4e-17  Score=137.68  Aligned_cols=203  Identities=12%  Similarity=0.061  Sum_probs=133.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.    .++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus        19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS----TKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999988763    2222222 2222  3568999999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcc--eeec-cCCC-CCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVK--RFLP-SEFG-NDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~--~~i~-s~~g-~~~~~~~~~~~~~~~~~  128 (292)
                       ++|++||+||...                   +.++..+++++.+.- .+  ++|+ |+.. .....     .+...|.
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~-----~~~~~Y~  168 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL-TEGGRIVLTSSNTSKDFSV-----PKHSLYS  168 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC-CTTCEEEEECCTTTTTCCC-----TTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCeEEEEeCchhccCCC-----CCCchhH
Confidence             6899999999754                   556777788877653 23  6665 4432 22121     1233455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCC---CCCCc-eeecCCCcceEEeeccchHHHHHH
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPA---PPREK-VTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .+|..++.+.+.       .|+++..++||.+.+.............   ..... ............+.+++|+|++++
T Consensus       169 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  248 (270)
T 3is3_A          169 GSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVG  248 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            599999888764       5899999999999876433211100000   00000 000111112234678999999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++....  ..|+.+++.|
T Consensus       249 ~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          249 FLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             HHTSGGGTTCCSCEEEEST
T ss_pred             HHcCCccCCccCcEEEeCC
Confidence            9997543  2467777764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.73  E-value=6.6e-17  Score=133.51  Aligned_cols=178  Identities=10%  Similarity=0.004  Sum_probs=125.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+...     .         ....+.+|++|.+++.++++       ++
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~-----~---------~~~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP-----N---------ADHSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----T---------SSEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc-----c---------cccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998432     1         12457889999998888775       46


Q ss_pred             CEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           75 DVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        75 d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      |++||+||...                    +.++..+++++.+.- .-.++|+ |+.......     .+...|..+|.
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~sKa  163 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT-----SGMIAYGATKA  163 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----TTBHHHHHHHH
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC-----CCCchhHHHHH
Confidence            99999999532                    556777888877653 0135665 443221111     12334555999


Q ss_pred             HHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC-
Q 039623          133 KIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG-  202 (292)
Q Consensus       133 ~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~-  202 (292)
                      .++.+.+.         .++++..++||.+.+........       .         .....+++++|+|++++.++.+ 
T Consensus       164 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~-------~---------~~~~~~~~~~dva~~i~~l~~~~  227 (251)
T 3orf_A          164 ATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS-------D---------ANFDDWTPLSEVAEKLFEWSTNS  227 (251)
T ss_dssp             HHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT-------T---------SCGGGSBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc-------c---------ccccccCCHHHHHHHHHHHhcCc
Confidence            99998873         36889999999887654322211       1         1123467889999999999988 


Q ss_pred             --CcCCCceEEEcC
Q 039623          203 --PRTLNKTLYIRP  214 (292)
Q Consensus       203 --~~~~~~~~~~~~  214 (292)
                        ....|+.+++.+
T Consensus       228 ~~~~~tG~~i~v~~  241 (251)
T 3orf_A          228 DSRPTNGSLVKFET  241 (251)
T ss_dssp             GGCCCTTCEEEEEE
T ss_pred             cccCCcceEEEEec
Confidence              233577777764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.73  E-value=2e-17  Score=138.46  Aligned_cols=197  Identities=12%  Similarity=0.085  Sum_probs=128.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+.     ++.+.+ +.+  ...++..+.+|++|.+++.++++      
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKP-----GSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESST-----TTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999999984     333222 222  24578999999999988887775      


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|++|||||...                   +.++..++++    +++.+ ..++|. |+.......     .+...|.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~-----~~~~~Y~  182 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPK-----SVVTAYA  182 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTBHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC-----CCchhhH
Confidence            6899999999643                   3344444444    45555 577776 443221111     1223355


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .+|..++.+.+.       .|+++..++||.+.+..........     ..... ..........+..++|+|++++.++
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  257 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD-----PEGWDEYVRTLNWMGRAGRPEEMVGAALFLA  257 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC-----HHHHHHHHHHHSTTCSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC-----hHHHHHHHhhcCccCCCcCHHHHHHHHHHHc
Confidence            599999888764       4799999999999765332111000     00000 0000001123467899999999999


Q ss_pred             cCCc--CCCceEEEcC
Q 039623          201 DGPR--TLNKTLYIRP  214 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~  214 (292)
                      .+..  ..|+.+.+.|
T Consensus       258 s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          258 SEACSFMTGETIFLTG  273 (275)
T ss_dssp             SGGGTTCCSCEEEESS
T ss_pred             CcccCCCCCCEEEeCC
Confidence            8643  2467777764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.73  E-value=3.7e-17  Score=136.24  Aligned_cols=197  Identities=12%  Similarity=0.018  Sum_probs=127.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hh--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IF--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++..++.    .++.+.+. .+  ....+.++.+|++|++++.++++      
T Consensus        28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGK----AAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSC----SHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4699999999999999999999999999886653    33332222 22  23468899999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                       ++|++|||||...                   +.++..+++++.+.- .-.++|. |+.......     +....|..+
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  178 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-----PSYGIYAAA  178 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-----TTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-----CCchHHHHH
Confidence             6899999999754                   456667777776542 0135665 432111111     123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..++||.+.+........       ......+........+.+++|+|++++.++...
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  251 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS-------DEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPD  251 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC-------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999988874       47999999999987654321100       001111111222335678999999999999764


Q ss_pred             c--CCCceEEEcC
Q 039623          204 R--TLNKTLYIRP  214 (292)
Q Consensus       204 ~--~~~~~~~~~~  214 (292)
                      .  ..|+.+.+.|
T Consensus       252 ~~~itG~~i~vdG  264 (267)
T 3u5t_A          252 GAWVNGQVLRANG  264 (267)
T ss_dssp             TTTCCSEEEEESS
T ss_pred             ccCccCCEEEeCC
Confidence            3  2466777754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.72  E-value=2.2e-17  Score=137.51  Aligned_cols=200  Identities=11%  Similarity=0.013  Sum_probs=128.3

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+  |+||+++++.|+++|++|++++|+. .. .+..+.+... ..+..++.+|++|++++.++++       
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH-HHHHHHHHHh-cCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            359999999  9999999999999999999999984 11 1222222111 1245789999999999888876       


Q ss_pred             cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                      ++|++||+||...                        +.++..+++++.+.- .-.++|+ |+.......     ++...
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~  161 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI-----PNYNV  161 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----TTTTH
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC-----CCchH
Confidence            5899999998531                        345666777776542 0136665 443222111     12334


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .+++++.++||++.+.........      ......+........+.+++|+|++++.+
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~v~~l  235 (265)
T 1qsg_A          162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF------RKMLAHCEAVTPIRRTVTIEDVGNSAAFL  235 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc------HHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            55599999988764       379999999999987643211000      00000000000112357899999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +....  ..|+.+++.|.
T Consensus       236 ~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          236 CSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             TSGGGTTCCSCEEEESTT
T ss_pred             hCchhcCccCCEEEECCC
Confidence            97543  24677777654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.72  E-value=1.2e-17  Score=139.42  Aligned_cols=208  Identities=9%  Similarity=0.014  Sum_probs=132.5

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++|+||||+  |+||+++++.|+++|++|++++|+     ....+.++.+  ...++.++.+|++|.+++.++++     
T Consensus        15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVG-----DRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecc-----hhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            679999999  999999999999999999999998     3333333332  12358899999999999888876     


Q ss_pred             --cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCC
Q 039623           73 --QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 --~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                        ++|++|||||...                        +.++..+++++.+.- .-.++|+ |+.......     ...
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  164 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI-----PNY  164 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----TTT
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC-----CCc
Confidence              5799999998631                        445666777765541 0135555 443322221     123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|..+|..++.+.+.       .|+++..++||.+.+.........      ...............+.+++|+|++++
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~pedva~~i~  238 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF------GKILDFVESNSPLKRNVTIEQVGNAGA  238 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH------HHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch------HHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            4455599999888764       479999999999876543211100      000000000111224568899999999


Q ss_pred             HhhcCCc--CCCceEEEcCCCccccHHHHHH
Q 039623          198 NSIDGPR--TLNKTLYIRPPGNVYSFNELVT  226 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~~~~~~t~~e~~~  226 (292)
                      .++....  ..|+.+++.|.. .++..++++
T Consensus       239 ~l~s~~~~~~tG~~i~vdgG~-~~~~~~~~~  268 (271)
T 3ek2_A          239 FLLSDLASGVTAEVMHVDSGF-NAVVGGMAG  268 (271)
T ss_dssp             HHHSGGGTTCCSEEEEESTTG-GGBCCCC--
T ss_pred             HHcCcccCCeeeeEEEECCCe-eeehhhhhh
Confidence            9998642  347777777644 666655543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.72  E-value=1.3e-16  Score=129.61  Aligned_cols=190  Identities=15%  Similarity=0.129  Sum_probs=128.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |+++||||++.||+.+++.|.++|++|.+.+|+..     +.   +.....++..+.+|++|++++.++++   +.|++|
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~-----~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A           12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD-----GV---HAPRHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT-----ST---TSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH-----HH---hhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            57999999999999999999999999999999843     32   22235678999999999999988886   689999


Q ss_pred             EcCcCCC---------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcchHH-HHHHH
Q 039623           79 STVSRGQ---------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSAYA-DKIKI  134 (292)
Q Consensus        79 ~~a~~~~---------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~~~-~K~~~  134 (292)
                      ||||...                     +..++.++..+++.+  .++|.  |..+....       |....|. +|..+
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~-------~~~~~Y~asKaav  154 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYSTFGS-------ADRPAYSASKGAI  154 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGTSCC-------SSCHHHHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeeccccCCC-------CCCHHHHHHHHHH
Confidence            9999765                     334555555555554  56665  44443221       2344455 99998


Q ss_pred             HHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--C
Q 039623          135 RRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--T  205 (292)
Q Consensus       135 e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~  205 (292)
                      ..+.+.       .|+++..|.||++-..........      .+....+........+...+|+|.+++.++.+..  .
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~------~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~i  228 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD------VEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFV  228 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC------HHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            888764       589999999998876532221100      0000000000112235678999999999997643  2


Q ss_pred             CCceEEEcC
Q 039623          206 LNKTLYIRP  214 (292)
Q Consensus       206 ~~~~~~~~~  214 (292)
                      .|+.+.+.|
T Consensus       229 TG~~l~VDG  237 (242)
T 4b79_A          229 TGAVLAVDG  237 (242)
T ss_dssp             CSCEEEEST
T ss_pred             cCceEEECc
Confidence            467777764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.72  E-value=2.7e-17  Score=137.13  Aligned_cols=194  Identities=11%  Similarity=0.063  Sum_probs=128.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhh--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIF--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++|+||||+|+||++++++|+++|++|+++.++.    .++. +..+.+  ...++.++.+|++|.+++.++++      
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD----AAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4699999999999999999999999998876542    2222 222222  23578999999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHH-----HhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVK-----EAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~-----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                       ++|++||+||...                   +.++.++++++.     +.+ ..++|+ |+.......     .+...
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~  176 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGN-----RGQVN  176 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCC-----TTCHH
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCC-----CCCch
Confidence             6999999999753                   445566666653     344 567776 442211111     12344


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .++++..++||.+.+.........         ............+.+++|+|++++.+
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~p~~~~~~~edva~~~~~L  247 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESA---------LKEAMSMIPMKRMGQAEEVAGLASYL  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHH---------HHHHHHTCTTCSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHH---------HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            55599988777653       479999999999977643221000         00000011123467899999999999


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +....  ..|+.+++.|
T Consensus       248 ~s~~~~~itG~~i~vdG  264 (267)
T 4iiu_A          248 MSDIAGYVTRQVISING  264 (267)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCCcccCccCCEEEeCC
Confidence            97643  3467777764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.72  E-value=1.2e-16  Score=133.05  Aligned_cols=202  Identities=10%  Similarity=0.059  Sum_probs=129.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh----cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK----NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~----~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|.||+++++.|.++|++|++++|+     .++.+.+. .+.    ..++..+.+|++|.+++.++++    
T Consensus         9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARD-----GERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999998     55443322 221    2348999999999998887765    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeec-cC-CCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLP-SE-FGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~-s~-~g~~~~~~~~~~~~~  124 (292)
                         ++|++||+||...                   +.++..+++++.+    .+ -.++|. |+ .+....      ...
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------~~~  156 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPE------PHM  156 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCC------TTB
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCC------CCc
Confidence               6899999999753                   3455555555543    33 456765 33 332211      123


Q ss_pred             cchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCC-CCCCCcee-e--cCCCcceEEeeccchHH
Q 039623          125 KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAP-APPREKVT-I--FGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       125 ~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~~~~~i~v~D~a  193 (292)
                      ..|..+|..++.+.+.       .|+++..++||.+.+............ ........ .  .........+.+++|+|
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA  236 (265)
T 3lf2_A          157 VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAA  236 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHH
Confidence            3455599999888764       479999999999977643322111000 00000000 0  00001123467899999


Q ss_pred             HHHHHhhcCCc--CCCceEEEcCC
Q 039623          194 TYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       194 ~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++++.++....  ..|+.+.+.|.
T Consensus       237 ~~v~fL~s~~~~~itG~~i~vdGG  260 (265)
T 3lf2_A          237 RAILFLASPLSAYTTGSHIDVSGG  260 (265)
T ss_dssp             HHHHHHHSGGGTTCCSEEEEESSS
T ss_pred             HHHHHHhCchhcCcCCCEEEECCC
Confidence            99999997542  34677777653

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.72  E-value=2.4e-16  Score=132.05  Aligned_cols=206  Identities=12%  Similarity=0.049  Sum_probs=129.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC--------CCcchhhH-hhh--hcCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS--------DPVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+....        +.++.+.. +.+  ....+..+.+|++|.+++.++
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV   91 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            4699999999999999999999999999999852210        02222221 112  235689999999999998887


Q ss_pred             Hc-------cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCc
Q 039623           71 IK-------QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        71 ~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~  119 (292)
                      ++       ++|++||+||...                   +.++..++++    +++.+.-.++|. |+.......   
T Consensus        92 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  168 (277)
T 3tsc_A           92 VDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ---  168 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC---
Confidence            75       5899999999754                   3344444444    444431256765 443222211   


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceecccccccc-----ccCCCCCCCCCceeecCCCcceEEee
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTL-----AQIGAPAPPREKVTIFGDGNAGAVYN  187 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i  187 (292)
                        .....|..+|..++.+.+.       .|+++..++||.+.+......     .....  ............... .+.
T Consensus       169 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~-r~~  243 (277)
T 3tsc_A          169 --PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAME--TNPQLSHVLTPFLPD-WVA  243 (277)
T ss_dssp             --SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHH--TCGGGTTTTCCSSSC-SCB
T ss_pred             --CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhccc--ccHHHHHHhhhccCC-CCC
Confidence              1233455599999888764       479999999999977643210     00000  000000001111111 367


Q ss_pred             ccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          188 KEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +++|+|++++.++.++.  ..|+.+++.|.
T Consensus       244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          244 EPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            89999999999997653  34777877653

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.72  E-value=2.8e-16  Score=131.86  Aligned_cols=202  Identities=9%  Similarity=0.020  Sum_probs=128.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+......++.++.+|++|.+++.++++       ++
T Consensus         6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            6 EVALITGGASGLGRALVDRFVAEGARVAVLDKS-----AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998     666555444445689999999999988877765       58


Q ss_pred             CEEEEcCcCCC------------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           75 DVVISTVSRGQ------------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        75 d~vi~~a~~~~------------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                      |++|||||...                        +.++..+++++.    +.+  .++|. |+.......     ....
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~  153 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--GSVVFTISNAGFYPN-----GGGP  153 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSSS-----SSCH
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CeEEEEecchhccCC-----CCCc
Confidence            99999999632                        233444555543    333  45655 432221111     1223


Q ss_pred             chHHHHHHHHHHHHH------cCccEEEEecceeccccccccccCCC-CCCCCCc-eeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPREK-VTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..++.+.+.      ..+++..++||.+............. ....... ............+..++|+|++++
T Consensus       154 ~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  233 (281)
T 3zv4_A          154 LYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYV  233 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            444599999888774      23888888999887654321110000 0000000 000111112235678999999999


Q ss_pred             HhhcCCc---CCCceEEEcCC
Q 039623          198 NSIDGPR---TLNKTLYIRPP  215 (292)
Q Consensus       198 ~~l~~~~---~~~~~~~~~~~  215 (292)
                      .++.++.   ..|+.+++.|.
T Consensus       234 fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          234 FFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             HHHSTTTSTTCSSCEEEESSS
T ss_pred             HhhcccccccccCcEEEECCC
Confidence            9998332   35777888653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.72  E-value=5e-17  Score=135.08  Aligned_cols=200  Identities=13%  Similarity=0.091  Sum_probs=126.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|....  .++.+.+ +.+.  ..++.++.+|++|.+++.++++      
T Consensus        12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKD--SDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGG--HHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccC--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            469999999999999999999999999999886221  2222222 2222  3458899999999999888875      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                       ++|++|||||...                   +.++..+++++.+.  + -.++|. |+.......     .....|..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS~~~~~~~-----~~~~~Y~a  163 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIATSLLAAYT-----GFYSTYAG  163 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECCCHHHHHH-----CCCCC---
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEechhhccCC-----CCCchhHH
Confidence             6899999999653                   45666777777653  2 345665 332111111     12344555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..++||.+..........       ...............+.+++|+|++++.++..
T Consensus       164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~  236 (262)
T 3ksu_A          164 NKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET-------KESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD  236 (262)
T ss_dssp             --CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc-------hHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence            99998888764       47999999999987654322111       00111111112233567899999999999986


Q ss_pred             Cc-CCCceEEEcCCC
Q 039623          203 PR-TLNKTLYIRPPG  216 (292)
Q Consensus       203 ~~-~~~~~~~~~~~~  216 (292)
                      .. ..|+.+.+.|..
T Consensus       237 ~~~itG~~i~vdGg~  251 (262)
T 3ksu_A          237 GWWINGQTIFANGGY  251 (262)
T ss_dssp             TTTCCSCEEEESTTC
T ss_pred             CCCccCCEEEECCCc
Confidence            32 247778887644

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.71  E-value=2e-16  Score=135.02  Aligned_cols=208  Identities=13%  Similarity=0.105  Sum_probs=130.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCC-------CcchhhH-hhh--hcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASD-------PVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+.....       .++.+.. +.+  ....+.++.+|++|++++.+++
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  126 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV  126 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            47999999999999999999999999999988633210       1122111 111  2356889999999999988877


Q ss_pred             c-------cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCcc
Q 039623           72 K-------QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        72 ~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                      +       ++|++|||||...                   +.++..+++++    ++.+.-.++|. |+.......    
T Consensus       127 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----  202 (317)
T 3oec_A          127 DEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA----  202 (317)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC----
Confidence            5       6899999999753                   34444555544    44431245665 443222111    


Q ss_pred             CCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccc------cccCCCCCCCCCc-eeecCC-CcceEE
Q 039623          121 VEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPT------LAQIGAPAPPREK-VTIFGD-GNAGAV  185 (292)
Q Consensus       121 ~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~-~~~~~~  185 (292)
                       .....|..+|..++.+.+.       .|+++..++||++.+.....      +... ........ ...+.. ......
T Consensus       203 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~  280 (317)
T 3oec_A          203 -PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPH-LENPTREDAAELFSQLTLLPIP  280 (317)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTT-CSSCCHHHHHHHHTTTCSSSSS
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhh-ccccchhHHHHHHhhhccCCCC
Confidence             1233455599999888764       48999999999997753211      0000 00000000 000000 111146


Q ss_pred             eeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          186 YNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.+++|+|++++.++....  ..|+.+++.|.
T Consensus       281 ~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          281 WVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             SBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence            7899999999999997643  24778888753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.71  E-value=9.8e-17  Score=135.01  Aligned_cols=193  Identities=16%  Similarity=0.185  Sum_probs=128.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC---CEEEEecCCCCCCCcchhhHhh-hh----cCCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH---PTFALVRESTASDPVKGKLIEI-FK----NLGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~-~~----~~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      ++++||||+|.||+++++.|+++|+   +|++.+|+     .++.+.+.. +.    ..++.++.+|++|++++.++++ 
T Consensus        34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARR-----LEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            5799999999999999999999987   89999998     555433322 21    3468899999999999988886 


Q ss_pred             ------cCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccC
Q 039623           73 ------QVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVV  121 (292)
Q Consensus        73 ------~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~  121 (292)
                            ++|++|||||...                    +.++..+++++    ++.+ ..++|. |+.......     
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~-----  182 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAY-----  182 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-----
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCC-----
Confidence                  5899999999532                    33444555544    5555 577776 443222111     


Q ss_pred             CCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHH
Q 039623          122 EPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       122 ~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a  193 (292)
                      .....|..+|..++.+.+.       .|+++..++||++.+.........     ..... ..+..    ..+++++|+|
T Consensus       183 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~----~~p~~pedvA  253 (287)
T 3rku_A          183 PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG-----NEEQAKNVYKD----TTPLMADDVA  253 (287)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT-----CHHHHHHHHTT----SCCEEHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC-----cHHHHHHhhcc----cCCCCHHHHH
Confidence            1233455599999888764       479999999999977642111000     00000 00111    1234889999


Q ss_pred             HHHHHhhcCCcC--CCceEEEcC
Q 039623          194 TYTINSIDGPRT--LNKTLYIRP  214 (292)
Q Consensus       194 ~~~~~~l~~~~~--~~~~~~~~~  214 (292)
                      ++++.++..+..  .++++.+.+
T Consensus       254 ~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          254 DLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHHhCCCCCeEecceEEeeC
Confidence            999999987643  356666654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.71  E-value=6.4e-17  Score=132.35  Aligned_cols=181  Identities=11%  Similarity=0.008  Sum_probs=122.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---------   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+...     .       .....++.+|++|++++.++++         
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~-----~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND-----Q-------ADSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT-----T-------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccc-----c-------ccccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998432     1       1135678899999988877765         


Q ss_pred             cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           73 QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        73 ~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      ++|++||+||...                    +.++..+++++.+.- .-.++|+ |+.......     .+...|..+
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~s  146 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-----PSMIGYGMA  146 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----TTBHHHHHH
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC-----CCcHHHHHH
Confidence            6899999999531                    345666677776642 0246665 443221111     123345559


Q ss_pred             HHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          131 KIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      |..++.+.+.         .+++++.++||++.+........       ...         ...+++.+|+|++++.++.
T Consensus       147 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~~---------~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          147 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP-------NAD---------HSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST-------TCC---------GGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC-------Ccc---------ccccCCHHHHHHHHHHHHc
Confidence            9999988764         24889999999987764322110       000         1134677999999997774


Q ss_pred             CCc---CCCceEEEcCC
Q 039623          202 GPR---TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~---~~~~~~~~~~~  215 (292)
                      ++.   ..|+.+.+.|.
T Consensus       211 s~~~~~~~G~~~~v~gg  227 (236)
T 1ooe_A          211 ETSSRPSSGALLKITTE  227 (236)
T ss_dssp             CGGGCCCTTCEEEEEEE
T ss_pred             CCCcccccccEEEEecC
Confidence            332   23667776644

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.71  E-value=2.2e-16  Score=129.61  Aligned_cols=196  Identities=11%  Similarity=0.042  Sum_probs=132.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |.++||||++.||+.+++.|.++|++|.+.+|+     .++.+.+. ++.  ..++..+.+|++|++++.++++      
T Consensus         8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~-----~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL-----EDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     55554332 232  3468889999999999888774      


Q ss_pred             -cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~  125 (292)
                       ++|++|||||...                        +..++.++..+++.+ -.++|.  |..|.....      ...
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~------~~~  155 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGF------AGA  155 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSS------SCH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCC------CCh
Confidence             5899999999542                        455677777777776 577776  444432221      223


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-ecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-IFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..+..+.+.       .|+++..|.||++-..........     ...... ..........+..++|+|.+++
T Consensus       156 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~~~~~R~g~pediA~~v~  230 (254)
T 4fn4_A          156 PYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP-----SELGMRTLTKLMSLSSRLAEPEDIANVIV  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC-----CHHHHHHHHHHHTTCCCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC-----cHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            455599998888764       589999999998876532111110     000000 0000000123467899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++.+..  ..|+.+.+.|
T Consensus       231 fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          231 FLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCCcCCEEEeCC
Confidence            9997643  2467777764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.71  E-value=1.4e-16  Score=134.47  Aligned_cols=199  Identities=11%  Similarity=0.042  Sum_probs=129.9

Q ss_pred             ceEEEEccCCc--chHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGY--IGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|+  ||+++++.|+++|++|++++|+     .+..+.++.+.  ..++.++.+|++|.+++.++++     
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG-----DALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS-----HHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            47999999988  9999999999999999999997     33333333321  2468899999999999888875     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                        ++|++|||||...                       +.++..+++++.+.- .-.++|. |+.......     ....
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~  181 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM-----PNYN  181 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC-----TTTT
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC-----CchH
Confidence              6899999999641                       456677777776642 1246665 433222111     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++..++||++.+.........      ...............+.+++|+|++++.
T Consensus       182 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedvA~~v~~  255 (293)
T 3grk_A          182 VMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF------RYILKWNEYNAPLRRTVTIDEVGDVGLY  255 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH------HHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch------HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            455599999888764       479999999999876532211000      0000000000112245688999999999


Q ss_pred             hhcCCc--CCCceEEEcCCC
Q 039623          199 SIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~~  216 (292)
                      ++....  ..|+.+++.|..
T Consensus       256 L~s~~~~~itG~~i~vdGG~  275 (293)
T 3grk_A          256 FLSDLSRSVTGEVHHADSGY  275 (293)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HcCccccCCcceEEEECCCc
Confidence            997642  347778887543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.70  E-value=1.8e-16  Score=134.10  Aligned_cols=198  Identities=14%  Similarity=0.051  Sum_probs=130.4

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|  +||+++++.|+++|++|++++|+     .+..+.++.+  ....+.++.+|++|.+++.++++     
T Consensus        31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS-----ETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4799999997  99999999999999999999998     3333333332  12357899999999999888875     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                        ++|++|||||...                       +.++..+++++.+.- .-.++|. |+.......     ....
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~-----~~~~  180 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV-----PHYN  180 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC-----TTTT
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC-----CCch
Confidence              5899999999641                       456667777776542 0235665 443322221     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++..++||++.+.........      ...............+..++|+|++++.
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedvA~~v~f  254 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF------HYILTWNKYNSPLRRNTTLDDVGGAALY  254 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH------HHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch------HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            455599999888764       479999999999986532211000      0000000000011235678999999999


Q ss_pred             hhcCCc--CCCceEEEcCC
Q 039623          199 SIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~  215 (292)
                      ++....  ..|+.+++.|.
T Consensus       255 L~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          255 LLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HcCCccCCccCCEEEECCC
Confidence            998642  34777888754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.70  E-value=1.7e-16  Score=133.26  Aligned_cols=200  Identities=9%  Similarity=0.004  Sum_probs=131.0

Q ss_pred             ceEEEEccCCc--chHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGY--IGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++|+||||+|+  ||+++++.|+++|++|++++|+..   .++.+.+... ..++.++.+|++|.+++.++++       
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF---KDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC---HHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH---HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            57999999977  999999999999999999999841   2333333222 2458999999999999888875       


Q ss_pred             cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCCc
Q 039623           73 QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                      ++|++|||||...                        +.++..+++++.+.-  +-.++|+ |+.......     ....
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~  177 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM-----PSYN  177 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC-----TTTH
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC-----CCch
Confidence            4799999999641                        345566666665431  1346665 433222111     1233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .++++..++||.+.+.........      ...............+.+++|+|++++.
T Consensus       178 ~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~pedvA~~v~~  251 (280)
T 3nrc_A          178 TMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF------KKMLDYNAMVSPLKKNVDIMEVGNTVAF  251 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH------HHHHHHHHHHSTTCSCCCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch------HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            455599999888763       579999999999987643221100      0000000000112245788999999999


Q ss_pred             hhcCCc--CCCceEEEcCCC
Q 039623          199 SIDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~~  216 (292)
                      ++....  ..|+.+++.|..
T Consensus       252 l~s~~~~~~tG~~i~vdgG~  271 (280)
T 3nrc_A          252 LCSDMATGITGEVVHVDAGY  271 (280)
T ss_dssp             TTSGGGTTCCSCEEEESTTG
T ss_pred             HhCcccCCcCCcEEEECCCc
Confidence            997643  357788887543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.70  E-value=1.2e-16  Score=133.67  Aligned_cols=200  Identities=12%  Similarity=0.044  Sum_probs=128.6

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      ++++||||+  |+||+++++.|+++|++|++++|+.. . .+..+.+... ..++.++.+|++|++++.++++       
T Consensus         7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L-EKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H-HHHHHHHHHh-cCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            579999999  99999999999999999999999842 1 1122222211 1247899999999998888775       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++|++||+||...                       +.++..+++++.+.- .-.++|+ |+.+.....     .+...|
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y  158 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM-----AHYNVM  158 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----TTCHHH
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC-----CCchhh
Confidence            5799999998531                       456777777776541 0146665 443222111     123345


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|..++.+.+.       .|++++.++||.+.+.........      ......+........+.+++|+|++++.++
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~p~dva~~~~~l~  232 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF------RMILKWNEINAPLRKNVSLEEVGNAGMYLL  232 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc------HHHHHHHHhcCCcCCCCCHHHHHHHHHHHh
Confidence            5599999888764       489999999999987643211000      000000000000113468899999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      ....  ..|+.+++.|.
T Consensus       233 s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          233 SSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CccccCCCCCEEEECCC
Confidence            7532  24667777643

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.70  E-value=6.3e-16  Score=130.91  Aligned_cols=208  Identities=13%  Similarity=0.062  Sum_probs=131.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-------CCcchhh-Hhhh--hcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-------DPVKGKL-IEIF--KNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~-~~~~--~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+....       +.++.+. .+.+  ...++.++.+|++|.+++.+++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  108 (299)
T 3t7c_A           29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV  108 (299)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            4799999999999999999999999999999973211       1222211 1222  2356899999999999988877


Q ss_pred             c-------cCCEEEEcCcCCC--------------------chhHHHHHHHHHH----hCCcceeec-cCCCCCCccCCc
Q 039623           72 K-------QVDVVISTVSRGQ--------------------IPEQAKIIAAVKE----AGNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        72 ~-------~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~----~~~~~~~i~-s~~g~~~~~~~~  119 (292)
                      +       ++|++|||||...                    +.++..+++++..    .+.-.++|. |+.......   
T Consensus       109 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---  185 (299)
T 3t7c_A          109 DDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA---  185 (299)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC---
Confidence            5       6999999999643                    3445555555433    222456776 443322221   


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccC--CCCCCCCCceee------cCCCcceE
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQI--GAPAPPREKVTI------FGDGNAGA  184 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~  184 (292)
                        .....|..+|..++.+.+.       .|+++..|+||++.+.........  ............      ..... ..
T Consensus       186 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~  262 (299)
T 3t7c_A          186 --ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL-PI  262 (299)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSS-SC
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhccc-Cc
Confidence              1233455599999888764       479999999999987643211000  000000000000      00011 13


Q ss_pred             EeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          185 VYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       185 ~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      .+..++|+|++++.++....  ..|+.+++.|.
T Consensus       263 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          263 PYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence            46789999999999997653  34778888754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.70  E-value=2e-16  Score=131.76  Aligned_cols=198  Identities=11%  Similarity=0.074  Sum_probs=129.7

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+  |.||+++++.|+++|++|++++|+...   ...+.++.+   ...++.++.+|++|.+++.++++    
T Consensus        21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ---GAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSS---HHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcch---hHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            579999999  899999999999999999999987432   112222332   25678999999999999888775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         .+|++||+||...                   +.++..+++++    ++.+ ..++|. |+.......   ...+..
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~~~~~~  173 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIAN---FPQEQT  173 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC---SSSCCH
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccC---CCCCCC
Confidence               5799999999753                   33444444444    5555 567765 432211111   001233


Q ss_pred             chHHHHHHHHHHHHH----c--CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          126 SAYADKIKIRRAIEA----E--GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~----~--~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      .|..+|..++.+.+.    .  .+++..+.||++.........        ......+........+.+++|+|++++.+
T Consensus       174 ~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~r~~~~~dva~~~~~l  245 (267)
T 3gdg_A          174 SYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP--------KETQQLWHSMIPMGRDGLAKELKGAYVYF  245 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC--------HHHHHHHHTTSTTSSCEETHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC--------HHHHHHHHhcCCCCCCcCHHHHHhHhhee
Confidence            455599999888874    1  267888889888765432111        00111112222334567899999999999


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +....  ..|+.+++.|
T Consensus       246 ~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          246 ASDASTYTTGADLLIDG  262 (267)
T ss_dssp             HSTTCTTCCSCEEEEST
T ss_pred             ecCccccccCCEEEECC
Confidence            97642  3467777764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.70  E-value=1.8e-16  Score=130.06  Aligned_cols=181  Identities=8%  Similarity=-0.045  Sum_probs=124.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---------   72 (292)
                      |+|+||||+|+||+++++.|+++|++|++++|+...     ..       .....+.+|++|++++.++++         
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE-----EA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT-----TS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhh-----cc-------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998432     11       135678899999988887775         


Q ss_pred             cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           73 QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        73 ~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      ++|++||+||...                    +.++..+++++.+.- .-.++|. |+.......     .+...|..+
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~as  150 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----PGMIGYGMA  150 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----TTBHHHHHH
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-----CCchHHHHH
Confidence            6899999999531                    345666777776641 0146665 443221111     123345559


Q ss_pred             HHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          131 KIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      |..++.+.+.         .+++++.++||++-+........       ...         ...+++.+|+|++++.++.
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~---------~~~~~~~~~vA~~v~~l~~  214 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP-------EAD---------FSSWTPLEFLVETFHDWIT  214 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST-------TSC---------GGGSEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc-------chh---------hccCCCHHHHHHHHHHHhc
Confidence            9999988874         25889999999887654322110       000         1124677999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      ...  ..|+.+.+.|.
T Consensus       215 ~~~~~~~G~~~~v~g~  230 (241)
T 1dhr_A          215 GNKRPNSGSLIQVVTT  230 (241)
T ss_dssp             TTTCCCTTCEEEEEEE
T ss_pred             CCCcCccceEEEEeCC
Confidence            643  24667777653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.70  E-value=8.4e-17  Score=132.40  Aligned_cols=184  Identities=18%  Similarity=0.197  Sum_probs=112.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHH---HHH---ccCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLI---KAI---KQVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~---~~~---~~~d   75 (292)
                      ++++||||+|+||+++++.|.+ |+.|++++|+     +++.+.+..  ..++.++.+|+++.+...   +.+   .++|
T Consensus         6 k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            6 KIAVVTGATGGMGIEIVKDLSR-DHIVYALGRN-----PEHLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESC-----HHHHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHHh--hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999987 8999999998     555544433  357899999998875421   122   2689


Q ss_pred             EEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           76 VVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        76 ~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      ++||+||...                   +.+    ++.++..+++.+  .++|+ |+.......     .....|..+|
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~-----~~~~~Y~asK  150 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPH-----PGNTIYAASK  150 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC---------------CHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCC-----CCchHHHHHH
Confidence            9999999754                   233    444444444444  45665 433222111     1233455599


Q ss_pred             HHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          132 IKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       132 ~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      ..++.+.+.       .|+++..++||.+.+.........     ..       .......+++++|+|++++.++..+.
T Consensus       151 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~-------~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          151 HALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS-----QG-------TNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh-----hh-------cccccccCCCHHHHHHHHHHHHcCCC
Confidence            999888764       579999999999987644322111     00       00112246789999999999998765


Q ss_pred             CCCceEEEc
Q 039623          205 TLNKTLYIR  213 (292)
Q Consensus       205 ~~~~~~~~~  213 (292)
                      . +.++++.
T Consensus       219 ~-~~~~~i~  226 (245)
T 3e9n_A          219 T-TQITNVD  226 (245)
T ss_dssp             T-EEEEEEE
T ss_pred             c-cceeeeE
Confidence            3 4566653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.69  E-value=3.3e-16  Score=131.83  Aligned_cols=176  Identities=10%  Similarity=0.056  Sum_probs=119.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     +++.+.+.. +   ...++.++.+|++|.+++.++++     
T Consensus        29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     554433221 1   12358899999999988887765     


Q ss_pred             --cCCEEEEc-CcCCC------------------chhHHHHHHHHHHh---CCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 --QVDVVIST-VSRGQ------------------IPEQAKIIAAVKEA---GNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 --~~d~vi~~-a~~~~------------------~~~~~~l~~a~~~~---~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                        ++|++||+ +|...                  +.++..+++++.+.   + ..++|+ |+.......     .+...|
T Consensus       104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y  177 (286)
T 1xu9_A          104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAY-----PMVAAY  177 (286)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCC-----TTCHHH
T ss_pred             cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCC-----CCccHH
Confidence              69999999 56432                  33555555555432   2 256665 443221111     123445


Q ss_pred             HHHHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          128 YADKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       128 ~~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      ..+|..++.+.+.         .++++++++||.+.+.......       .+         .....+++++|+|+.++.
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~~---------~~~~~~~~~~~vA~~i~~  241 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV-------SG---------IVHMQAAPKEECALEIIK  241 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS-------CG---------GGGGGCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc-------cc---------cccCCCCCHHHHHHHHHH
Confidence            5599998877652         3789999999998765432110       00         112245789999999999


Q ss_pred             hhcCCc
Q 039623          199 SIDGPR  204 (292)
Q Consensus       199 ~l~~~~  204 (292)
                      ++..++
T Consensus       242 ~~~~~~  247 (286)
T 1xu9_A          242 GGALRQ  247 (286)
T ss_dssp             HHHTTC
T ss_pred             HHhcCC
Confidence            997653

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.69  E-value=3.7e-17  Score=132.65  Aligned_cols=183  Identities=11%  Similarity=-0.017  Sum_probs=122.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      ++++||||+|+||+++++.|.++|++|++++|+     .+                 +|++|++++.++++   ++|++|
T Consensus         7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~-----------------~D~~~~~~v~~~~~~~g~id~lv   64 (223)
T 3uce_A            7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQ-----TG-----------------LDISDEKSVYHYFETIGAFDHLI   64 (223)
T ss_dssp             EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGG-----GT-----------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCC-----cc-----------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence            369999999999999999999999999999997     11                 89999999988886   689999


Q ss_pred             EcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHHHHHHH
Q 039623           79 STVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      ||||...                    +.++..+++++.+.- .-.++|. |+.......     .+...|..+|..++.
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~asK~a~~~  139 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV-----ANTYVKAAINAAIEA  139 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----TTCHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----CCchHHHHHHHHHHH
Confidence            9999652                    455666777776542 0125665 443222111     223445559999988


Q ss_pred             HHHH----c-CccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEE
Q 039623          137 AIEA----E-GIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLY  211 (292)
Q Consensus       137 ~~~~----~-~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  211 (292)
                      +.+.    . .+++..++||.+.+..........    ................+.+++|+|++++.++......|+.++
T Consensus       140 ~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~  215 (223)
T 3uce_A          140 TTKVLAKELAPIRVNAISPGLTKTEAYKGMNADD----RDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGTVID  215 (223)
T ss_dssp             HHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHH----HHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             HHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhh----HHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCcEEE
Confidence            8764    2 388888999988766432211000    000000000111123567899999999999986555677888


Q ss_pred             EcCC
Q 039623          212 IRPP  215 (292)
Q Consensus       212 ~~~~  215 (292)
                      +.|.
T Consensus       216 vdgG  219 (223)
T 3uce_A          216 VDGG  219 (223)
T ss_dssp             ESTT
T ss_pred             ecCC
Confidence            8754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.69  E-value=1.2e-15  Score=128.23  Aligned_cols=183  Identities=14%  Similarity=0.087  Sum_probs=122.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCc--ch-hhHhhh--hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPV--KG-KLIEIF--KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~-~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+......-  +. +..+.+  ...++.++.+|++|.+++.++++    
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   89 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE   89 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999985432100  11 111222  24568999999999999888776    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++|||||...                   +.++..+++++.+.    + ..++|. |+.......    ..+..
T Consensus        90 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----~~~~~  164 (285)
T 3sc4_A           90 QFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPK----WLRPT  164 (285)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGG----GSCSH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCC----CCCCc
Confidence               7999999999754                   44555666665443    3 456776 432221111    01234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecc-eeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCN-CFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..++.+.+.       .|+++..++|| .+...........      ..         ....+...+|+|++++
T Consensus       165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~------~~---------~~~r~~~pedvA~~~~  229 (285)
T 3sc4_A          165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG------DE---------AMARSRKPEVYADAAY  229 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS------CC---------CCTTCBCTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc------cc---------cccCCCCHHHHHHHHH
Confidence            455599999888763       57999999999 4544332221110      00         0113467899999999


Q ss_pred             HhhcCCc
Q 039623          198 NSIDGPR  204 (292)
Q Consensus       198 ~~l~~~~  204 (292)
                      .++.++.
T Consensus       230 ~l~s~~~  236 (285)
T 3sc4_A          230 VVLNKPS  236 (285)
T ss_dssp             HHHTSCT
T ss_pred             HHhCCcc
Confidence            9998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.68  E-value=1.8e-16  Score=133.40  Aligned_cols=213  Identities=9%  Similarity=0.010  Sum_probs=132.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCC-------CcchhhH-hhh--hcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASD-------PVKGKLI-EIF--KNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~-~~~--~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      +++|||||+|+||+++++.|+++|++|++++|+.....       .++.+.. ..+  ...++.++.+|++|.+++.+++
T Consensus        11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   90 (287)
T 3pxx_A           11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL   90 (287)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            47999999999999999999999999999999743221       1111111 111  2457899999999999988877


Q ss_pred             c-------cCCEEEEcCcCCC-----------------chhHHHHHHHHHHhC-Ccceeec-cCC-CC-----CCccCCc
Q 039623           72 K-------QVDVVISTVSRGQ-----------------IPEQAKIIAAVKEAG-NVKRFLP-SEF-GN-----DVDRSQN  119 (292)
Q Consensus        72 ~-------~~d~vi~~a~~~~-----------------~~~~~~l~~a~~~~~-~~~~~i~-s~~-g~-----~~~~~~~  119 (292)
                      +       ++|++|||||...                 +.++..+++++.+.- .-.++|. |+. +.     .... ..
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~-~~  169 (287)
T 3pxx_A           91 ANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGA-GG  169 (287)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----
T ss_pred             HHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccc-cc
Confidence            6       6899999999743                 566777778776642 1245665 331 11     0011 11


Q ss_pred             cCCCC-cchHHHHHHHHHHHHH-------cCccEEEEecceecccccccccc--CCCCCCCCCce-----eecCCCcceE
Q 039623          120 VVEPA-KSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ--IGAPAPPREKV-----TIFGDGNAGA  184 (292)
Q Consensus       120 ~~~~~-~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~  184 (292)
                      ...+. ..|..+|..++.+.+.       .|+++..++||.+.+........  ...........     ..........
T Consensus       170 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (287)
T 3pxx_A          170 PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPT  249 (287)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSC
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccCC
Confidence            11122 3344599999888764       48999999999998764321100  00000000000     0001111124


Q ss_pred             EeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          185 VYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       185 ~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      .+.+++|+|++++.++....  ..|+.+++.|.
T Consensus       250 ~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          250 PYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence            67899999999999997543  34777888754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.68  E-value=4.1e-16  Score=129.42  Aligned_cols=187  Identities=11%  Similarity=0.048  Sum_probs=117.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+ +.+.  ..++.++.+|++|++++.++++      
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRH-----LDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999998     4444322 2221  3468899999999988877654      


Q ss_pred             --cCCEEEEcCc--CC-------C-----------------chhH----HHHHHHHHHhCCcceeec-cCCCCCCccCCc
Q 039623           73 --QVDVVISTVS--RG-------Q-----------------IPEQ----AKIIAAVKEAGNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        73 --~~d~vi~~a~--~~-------~-----------------~~~~----~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~  119 (292)
                        .+|++||+||  ..       .                 +.++    +.++..+++.+ ..++|. |+.......   
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---  156 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM---  156 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC---
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC---
Confidence              4699999994  21       1                 2223    33444444555 567776 443222111   


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCC-CcceEEeeccch
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGD-GNAGAVYNKEDD  191 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D  191 (292)
                         +...|..+|..++.+.+.       .|+++++++||++.+...........  .....  .... ......+...+|
T Consensus       157 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~pe~  229 (260)
T 2qq5_A          157 ---FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEE--VLQDP--VLKQFKSAFSSAETTEL  229 (260)
T ss_dssp             ---SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------CHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcccc--ccchh--HHHHHHhhhccCCCHHH
Confidence               234455599999888763       48999999999987764322110000  00000  0000 000112357899


Q ss_pred             HHHHHHHhhcCCc
Q 039623          192 IATYTINSIDGPR  204 (292)
Q Consensus       192 ~a~~~~~~l~~~~  204 (292)
                      +|++++.++..+.
T Consensus       230 va~~v~~l~s~~~  242 (260)
T 2qq5_A          230 SGKCVVALATDPN  242 (260)
T ss_dssp             HHHHHHHHHTCTT
T ss_pred             HHHHHHHHhcCcc
Confidence            9999999998753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.68  E-value=1.3e-15  Score=127.41  Aligned_cols=181  Identities=12%  Similarity=0.049  Sum_probs=117.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCC--cchhh-Hhhh--hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDP--VKGKL-IEIF--KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~-~~~~--~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |+++||||+|.||+++++.|.++|++|++++|+......  +..+. .+.+  ...++.++.+|++|.+++.++++    
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   86 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD   86 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998543210  01111 1111  14568899999999998888775    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++|||||...                   +.++..+.+++    ++.+ ..++|. |+.......   ......
T Consensus        87 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~---~~~~~~  162 (274)
T 3e03_A           87 TFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPA---WWGAHT  162 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHH---HHHHCH
T ss_pred             HcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC---CCCCCc
Confidence               6899999999743                   33444455544    3344 467776 443222110   011233


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecce-eccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNC-FAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      .|..+|..++.+.+.       .|+++..++||. +........        ...         ....+..++|+|++++
T Consensus       163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~--------~~~---------~~~~~~~pedvA~~v~  225 (274)
T 3e03_A          163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML--------PGV---------DAAACRRPEIMADAAH  225 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------------CC---------CGGGSBCTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc--------ccc---------cccccCCHHHHHHHHH
Confidence            455599999888764       579999999984 443322110        000         0112568999999999


Q ss_pred             HhhcCC
Q 039623          198 NSIDGP  203 (292)
Q Consensus       198 ~~l~~~  203 (292)
                      .++...
T Consensus       226 ~l~s~~  231 (274)
T 3e03_A          226 AVLTRE  231 (274)
T ss_dssp             HHHTSC
T ss_pred             HHhCcc
Confidence            999765

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.68  E-value=6.2e-16  Score=127.30  Aligned_cols=175  Identities=10%  Similarity=0.003  Sum_probs=119.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h---hcCCcEEEECCC--CCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F---KNLGVNVLYGDL--QDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~v~~v~~D~--~d~~~~~~~~~---   72 (292)
                      ++++||||+|+||+++++.|+++|++|++++|+     .++.+.+.. +   ...+..++.+|+  +|.+++.++++   
T Consensus        15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRT-----EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC-----HHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     554433222 2   225678888888  88888777664   


Q ss_pred             ----cCCEEEEcCcCCC--------------------chhHHHHHHHH----HHhCCcceeec-cCCCCCCccCCccCCC
Q 039623           73 ----QVDVVISTVSRGQ--------------------IPEQAKIIAAV----KEAGNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ----~~d~vi~~a~~~~--------------------~~~~~~l~~a~----~~~~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                          ++|++||+||...                    +.++..+++++    ++.+ ..++|+ |+.......     ..
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~  163 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGR-----AN  163 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCC-----TT
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCC-----CC
Confidence                6899999999642                    44555555655    4444 567776 432221111     12


Q ss_pred             CcchHHHHHHHHHHHHH--------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          124 AKSAYADKIKIRRAIEA--------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ...|..+|..++.+.+.        .++++..++||++...........      .          ....+...+|+|++
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~------~----------~~~~~~~p~dva~~  227 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD------E----------NPLNNPAPEDIMPV  227 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT------S----------CGGGSCCGGGGTHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc------c----------CccCCCCHHHHHHH
Confidence            33455599998888763        367888899998876543221110      0          01134578999999


Q ss_pred             HHHhhcCC
Q 039623          196 TINSIDGP  203 (292)
Q Consensus       196 ~~~~l~~~  203 (292)
                      ++.++...
T Consensus       228 ~~~l~s~~  235 (247)
T 3i1j_A          228 YLYLMGPD  235 (247)
T ss_dssp             HHHHHSGG
T ss_pred             HHHHhCch
Confidence            99999754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.68  E-value=1.9e-16  Score=130.96  Aligned_cols=197  Identities=12%  Similarity=0.037  Sum_probs=128.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hHhhhh--cCCcEEEECCCCCHHHHHHHHcc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGK-LIEIFK--NLGVNVLYGDLQDHESLIKAIKQ-----   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~-----   73 (292)
                      ++++||||+|.||+++++.|+++|++|.++.+++    .++.+ ....+.  ...+.++.+|++|.+++.++++.     
T Consensus         8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNR----KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----SHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc----hHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999875542    33322 222222  34578899999999888777642     


Q ss_pred             --------CCEEEEcCcCCC-------------------chhHHHHHHHHHHh--CCcceeec-cCCCCCCccCCccCCC
Q 039623           74 --------VDVVISTVSRGQ-------------------IPEQAKIIAAVKEA--GNVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        74 --------~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~--~~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                              +|++||+||...                   +.++..+++++.+.  + -.++|+ |+.......     +.
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~  157 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSRIINISSAATRISL-----PD  157 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEECCGGGTSCC-----TT
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-CCEEEEeCChhhccCC-----CC
Confidence                    899999999754                   44566677776554  2 245665 443222111     12


Q ss_pred             CcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEeeccchHHHH
Q 039623          124 AKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 ~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ...|..+|..++.+.+.       .++++..++||.+.+........       ... ............+.+++|+|++
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~  230 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS-------DPMMKQYATTISAFNRLGEVEDIADT  230 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-------SHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-------cHHHHHhhhccCCcCCCCCHHHHHHH
Confidence            33455599998888763       47999999999987664322110       000 0011111122346789999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++....  ..|+.+++.|.
T Consensus       231 ~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          231 AAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHhCcccCCccCCEEEecCC
Confidence            999997542  34777877653

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.68  E-value=1.5e-15  Score=125.25  Aligned_cols=198  Identities=14%  Similarity=0.134  Sum_probs=129.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |.++||||++.||+.+++.|.++|++|.+.+|+.     ++.+.++.+  ...++..+.+|++|++++.++++       
T Consensus         8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHA-----PDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-----CCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCc-----ccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999999983     333333332  24578999999999988877764       


Q ss_pred             cCCEEEEcCcCCC----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcc-h
Q 039623           73 QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKS-A  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~-~  127 (292)
                      +.|++||+||...                      +..++.++..+++.+  .++|.  |..|.. ..      |... |
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~-~~------~~~~~Y  153 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAVT-GQ------GNTSGY  153 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHHH-CC------SSCHHH
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhcc-CC------CCchHH
Confidence            5899999999754                      334555555555544  56665  433321 11      2334 4


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcce-EEeeccchHHHHHHHh
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG-AVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~  199 (292)
                      ..+|..+..+.+.       .|+++..|.||++.............  ............... ..+...+|+|.+++.+
T Consensus       154 ~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~plg~R~g~peeiA~~v~fL  231 (258)
T 4gkb_A          154 CASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFE--DPEAKLAEIAAKVPLGRRFTTPDEIADTAVFL  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-------------CHHHHHHTTCTTTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhccc--ChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            4599998888764       68999999999997664432211100  000000000000001 2456789999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +....  ..|+.+.+.|.
T Consensus       232 aS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          232 LSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhcCccCCeEEECCC
Confidence            97643  25777888654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.67  E-value=3.4e-16  Score=128.56  Aligned_cols=195  Identities=12%  Similarity=0.119  Sum_probs=130.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |.++||||++.||+.+++.|.++|++|.+.+|+     .++.+. .+.+.  ..++..+.+|++|++++.++++      
T Consensus        10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~-----~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D           10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIR-----ATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            469999999999999999999999999999998     554432 23332  3468889999999999888775      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++|||||...                       +..++.++..+.+.+.-.++|. |+.......      |....
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~------~~~~~  158 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR------PTVAP  158 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC------TTCHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC------CCchh
Confidence             5899999999765                       3445556666654431367775 433222221      23444


Q ss_pred             H-HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHH
Q 039623          128 Y-ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       128 ~-~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      | .+|..+..+.+.       .|+++..|.||.+...........       ... ..+........+..++|+|.+++.
T Consensus       159 Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-------~~~~~~~~~~~Pl~R~g~pediA~~v~f  231 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED-------KQFDSWVKSSTPSQRWGRPEELIGTAIF  231 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC-------HHHHHHHHHHSTTCSCBCGGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC-------HHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            5 499998888764       589999999999876643222110       000 000000011235678999999999


Q ss_pred             hhcCCc--CCCceEEEcC
Q 039623          199 SIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~  214 (292)
                      ++.+..  ..|+.+.+.|
T Consensus       232 L~S~~a~~iTG~~i~VDG  249 (255)
T 4g81_D          232 LSSKASDYINGQIIYVDG  249 (255)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCchhCCCcCCEEEECC
Confidence            997543  2467777764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.66  E-value=1.6e-15  Score=129.97  Aligned_cols=194  Identities=9%  Similarity=-0.010  Sum_probs=125.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEe-cCCCCCCCcchhhHh-hhh---cCCcEEEECCCCCHH-----------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALV-RESTASDPVKGKLIE-IFK---NLGVNVLYGDLQDHE-----------   65 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~---~~~v~~v~~D~~d~~-----------   65 (292)
                      +++|||||+|+||+++++.|+++|++|++++ |+     .++.+.+. .+.   ..++.++.+|++|.+           
T Consensus        47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence            4699999999999999999999999999999 87     44443322 221   346899999999988           


Q ss_pred             ------HHHHHHc-------cCCEEEEcCcCCC---------------------------------chhHHHHHHHHH--
Q 039623           66 ------SLIKAIK-------QVDVVISTVSRGQ---------------------------------IPEQAKIIAAVK--   97 (292)
Q Consensus        66 ------~~~~~~~-------~~d~vi~~a~~~~---------------------------------~~~~~~l~~a~~--   97 (292)
                            ++.++++       .+|++|||||...                                 +.++..+++++.  
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  8877775       6899999998642                                 223334444443  


Q ss_pred             --HhCC-----cceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccc
Q 039623           98 --EAGN-----VKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLA  162 (292)
Q Consensus        98 --~~~~-----~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~  162 (292)
                        +.+.     ..++|. |+.......     .....|..+|..++.+.+.       .|++++.|+||++.+.. ....
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~-----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~  275 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPL-----LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPP  275 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCH
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCC-----CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccH
Confidence              3220     256665 443222211     1233455599999888764       48999999999987664 2110


Q ss_pred             cCCCCCCCCCceeecCCCcceE-EeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          163 QIGAPAPPREKVTIFGDGNAGA-VYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ..         ...+....... .+.+++|+|++++.++....  ..|+.+.+.|.
T Consensus       276 ~~---------~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  322 (328)
T 2qhx_A          276 AV---------WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  322 (328)
T ss_dssp             HH---------HHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HH---------HHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            00         00000000011 35688999999999997532  34677777643

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.65  E-value=3e-15  Score=126.07  Aligned_cols=194  Identities=12%  Similarity=0.046  Sum_probs=125.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCC-cchhhHh-hhh---cCCcEEEECCCCC----HHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDP-VKGKLIE-IFK---NLGVNVLYGDLQD----HESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~-~~~---~~~v~~v~~D~~d----~~~~~~~~~   72 (292)
                      |+++||||+|+||+++++.|+++|++|++++|+     . ++.+.+. .+.   ..++.++.+|++|    .+++.++++
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN-----SAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESS-----CHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCC-----chHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            579999999999999999999999999999998     4 4433222 221   3468899999999    888877765


Q ss_pred             -------cCCEEEEcCcCCC-----------------------------chhHHHHHHHHHHhC---C------cceeec
Q 039623           73 -------QVDVVISTVSRGQ-----------------------------IPEQAKIIAAVKEAG---N------VKRFLP  107 (292)
Q Consensus        73 -------~~d~vi~~a~~~~-----------------------------~~~~~~l~~a~~~~~---~------~~~~i~  107 (292)
                             ++|++||+||...                             +.++..+++++.+.-   .      ..++|.
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence                   6899999998532                             223444555554432   0      246665


Q ss_pred             -cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCC
Q 039623          108 -SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGD  179 (292)
Q Consensus       108 -s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (292)
                       |+.......     .+...|..+|..++.+.+.       .|++++.++||.+.+.. . ....        ....+..
T Consensus       179 isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~--------~~~~~~~  243 (288)
T 2x9g_A          179 LCDAMVDQPC-----MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGEE--------EKDKWRR  243 (288)
T ss_dssp             ECCTTTTSCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHH--------HHHHHHH
T ss_pred             EecccccCCC-----CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cChH--------HHHHHHh
Confidence             443222111     1233455599998887763       48999999999987764 1 1000        0000000


Q ss_pred             CcceEEe-eccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          180 GNAGAVY-NKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       180 ~~~~~~~-i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ......+ .+++|+|++++.++....  ..|+.+.+.|.
T Consensus       244 ~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          244 KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence            0001123 688999999999997532  34667777643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.65  E-value=4.2e-15  Score=128.08  Aligned_cols=191  Identities=15%  Similarity=0.076  Sum_probs=123.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCC--cch-hhHhhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDP--VKG-KLIEIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~-~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|.||+++++.|+++|++|++++|+......  +.. +..+.+.  ..++.++.+|++|++++.++++    
T Consensus        46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~  125 (346)
T 3kvo_A           46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK  125 (346)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999998543210  001 1122222  3458889999999999888875    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHHHH----HhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAAVK----EAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a~~----~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++|||||...                   +.++..+++++.    +.+ ..++|. |+.......   ......
T Consensus       126 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~---~~~~~~  201 (346)
T 3kvo_A          126 KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPV---WFKQHC  201 (346)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGG---GTSSSH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCC---CCCCch
Confidence               7999999999643                   445556666654    334 567776 443222111   011233


Q ss_pred             chHHHHHHHHHHHHH------cCccEEEEecce-eccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA------EGIQYTYVSCNC-FAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~------~~~~~~~ir~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.      .++++..+.|+. +.......+..       .         .....+..++|+|++++.
T Consensus       202 ~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~-------~---------~~~~r~~~pedvA~~v~~  265 (346)
T 3kvo_A          202 AYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGG-------P---------GIESQCRKVDIIADAAYS  265 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC------------------CGGGCBCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhcc-------c---------cccccCCCHHHHHHHHHH
Confidence            455599998887764      478899999985 44432221110       0         011234678999999999


Q ss_pred             hhcCCcCCCceEEE
Q 039623          199 SIDGPRTLNKTLYI  212 (292)
Q Consensus       199 ~l~~~~~~~~~~~~  212 (292)
                      ++.......+.+.+
T Consensus       266 L~s~~~~itG~~iv  279 (346)
T 3kvo_A          266 IFQKPKSFTGNFVI  279 (346)
T ss_dssp             HHTSCTTCCSCEEE
T ss_pred             HHhcCCCCCceEEE
Confidence            99874333333334

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.65  E-value=2.3e-15  Score=128.95  Aligned_cols=150  Identities=20%  Similarity=0.288  Sum_probs=103.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-----cCCcEEEECCCCCHHHHHHHHcc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-----NLGVNVLYGDLQDHESLIKAIKQ---   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~v~~v~~D~~d~~~~~~~~~~---   73 (292)
                      ++|+||||+|+||+++++.|+++|++|+++.|+.... ....+.++...     ..++.++.+|++|.+++.++++.   
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL-KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG-GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcH-HHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            5799999999999999999999999999998873321 11111112111     25689999999999999998874   


Q ss_pred             --CCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           74 --VDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        74 --~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                        +|++|||||...                   +.++.+++++    +++.+ ..++|+ |+.......     .....|
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~-----~~~~~Y  155 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL-----PFNDVY  155 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC-----TTCHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCC-----CCChHH
Confidence              899999998642                   3445555555    45556 678876 443222111     112344


Q ss_pred             HHHHHHHHHHHHH-------cCccEEEEecceeccccc
Q 039623          128 YADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus       128 ~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~  158 (292)
                      ..+|..++.+.+.       .|+++++|+||.+.+.+.
T Consensus       156 ~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~  193 (327)
T 1jtv_A          156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence            4599999888763       589999999999887643

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.64  E-value=1.8e-15  Score=136.02  Aligned_cols=202  Identities=15%  Similarity=0.225  Sum_probs=135.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHccC----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIKQV----   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~~~----   74 (292)
                      ++||||||+|+||.++++.|.++|++ |++++|+.... +...+..+.+.  ..++.++.+|++|.+++.++++.+    
T Consensus       227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g  305 (486)
T 2fr1_A          227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV  305 (486)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence            57999999999999999999999986 89999984321 11112223332  345889999999999999998754    


Q ss_pred             --CEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           75 --DVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        75 --d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                        |+|||+||...                   +.++.++.+++.+.+ .++||+ |+.......     .....|..+|.
T Consensus       306 ~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~-----~g~~~Yaaaka  379 (486)
T 2fr1_A          306 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA-----PGLGGYAPGNA  379 (486)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC-----TTCTTTHHHHH
T ss_pred             CCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCC-----CCCHHHHHHHH
Confidence              99999999643                   567888999988776 788876 442211111     11345656999


Q ss_pred             HHHHHHH---HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCce
Q 039623          133 KIRRAIE---AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKT  209 (292)
Q Consensus       133 ~~e~~~~---~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  209 (292)
                      .++.+.+   ..|+++++|+||.+.+..+..-  .        ....+.  ...+.+++.+|+++++..++..+..   .
T Consensus       380 ~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~--~--------~~~~~~--~~g~~~i~~e~~a~~l~~~l~~~~~---~  444 (486)
T 2fr1_A          380 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--P--------VADRFR--RHGVIEMPPETACRALQNALDRAEV---C  444 (486)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECCBC----------------------CT--TTTEECBCHHHHHHHHHHHHHTTCS---S
T ss_pred             HHHHHHHHHHhcCCeEEEEECCeeCCCcccch--h--------HHHHHH--hcCCCCCCHHHHHHHHHHHHhCCCC---e
Confidence            8887664   4689999999998865422110  0        000011  1234679999999999999987542   2


Q ss_pred             EEEcCCCccccHHHHHHHHH
Q 039623          210 LYIRPPGNVYSFNELVTLWE  229 (292)
Q Consensus       210 ~~~~~~~~~~t~~e~~~~~~  229 (292)
                      +.+.    .+.+..+...+.
T Consensus       445 ~~v~----~~d~~~~~~~~~  460 (486)
T 2fr1_A          445 PIVI----DVRWDRFLLAYT  460 (486)
T ss_dssp             CEEC----EECHHHHHHHHT
T ss_pred             EEEE----eCCHHHHhhhhc
Confidence            3332    456777766543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.64  E-value=1.8e-15  Score=123.16  Aligned_cols=196  Identities=12%  Similarity=0.108  Sum_probs=130.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |.++||||++.||+.+++.|.++|++|.+.+|+..   .+..+.++. ...++..+.+|++|++++.++++  +.|++||
T Consensus        10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~---~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN   85 (247)
T 4hp8_A           10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP---DETLDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDILVN   85 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHH-TTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            46899999999999999999999999999999732   112222222 24568899999999988887776  6999999


Q ss_pred             cCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcchHH-HHHH
Q 039623           80 TVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSAYA-DKIK  133 (292)
Q Consensus        80 ~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~~~-~K~~  133 (292)
                      |||...                       +..++.++..+.+.+.-.++|.  |..+....       |....|. +|..
T Consensus        86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-------~~~~~Y~asKaa  158 (247)
T 4hp8_A           86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-------IRVPSYTAAKHG  158 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------SSCHHHHHHHHH
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-------CCChHHHHHHHH
Confidence            999755                       3445566666665542357775  43443222       2334454 9999


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC-
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT-  205 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  205 (292)
                      +..+.+.       .|+++..|.||++............      .....+........+-..+|+|.+++.++.+... 
T Consensus       159 v~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~------~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~  232 (247)
T 4hp8_A          159 VAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA------ARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADY  232 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH------HHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH------HHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            8888764       6899999999999765432221100      0000000001112345789999999999976532 


Q ss_pred             -CCceEEEcC
Q 039623          206 -LNKTLYIRP  214 (292)
Q Consensus       206 -~~~~~~~~~  214 (292)
                       .|+.+.+.|
T Consensus       233 iTG~~i~VDG  242 (247)
T 4hp8_A          233 VHGAILNVDG  242 (247)
T ss_dssp             CCSCEEEEST
T ss_pred             CcCCeEEECc
Confidence             467777764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.63  E-value=2.9e-15  Score=123.91  Aligned_cols=196  Identities=9%  Similarity=0.087  Sum_probs=123.0

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh----hhcCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI----FKNLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      |+++||||+|  .||+.+++.|.++|++|.+.+|+     .+..+.+..    ....++..+.+|++|++++.++++   
T Consensus         7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK-----ERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            5799999886  79999999999999999999998     444433332    234578999999999988877764   


Q ss_pred             ----cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCC
Q 039623           73 ----QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ----~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~  123 (292)
                          ++|+++|+||...                       ......+.+++...- .-.++|. |+.......      |
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~------~  155 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV------Q  155 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC------T
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc------c
Confidence                6899999999643                       111222223332211 0135654 333222221      2


Q ss_pred             CcchH-HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          124 AKSAY-ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 ~~~~~-~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ....| .+|..++.+.+.       .|+++..|.||++...........      ......+........+...+|+|.+
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~------~~~~~~~~~~~Pl~R~g~peevA~~  229 (256)
T 4fs3_A          156 NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGF------NTILKEIKERAPLKRNVDQVEVGKT  229 (256)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH------HHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCC------HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            33444 499998887764       589999999998876533221100      0000000000001134578999999


Q ss_pred             HHHhhcCCc--CCCceEEEcC
Q 039623          196 TINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~  214 (292)
                      ++.++.+..  ..|+.+.+.|
T Consensus       230 v~fL~Sd~a~~iTG~~i~VDG  250 (256)
T 4fs3_A          230 AAYLLSDLSSGVTGENIHVDS  250 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCchhcCccCCEEEECc
Confidence            999997643  2467777764

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.63  E-value=3.8e-15  Score=134.54  Aligned_cols=203  Identities=15%  Similarity=0.178  Sum_probs=134.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHcc--CCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIKQ--VDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~~--~d~   76 (292)
                      ++||||||+|+||.++++.|.++|+ +|++++|+.... +...+..+.+..  .++.++.+|++|.+++.++++.  +|+
T Consensus       260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~  338 (511)
T 2z5l_A          260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEA-PGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNA  338 (511)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCccc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcE
Confidence            5799999999999999999999998 588889974221 111222233333  3588899999999999999975  999


Q ss_pred             EEEcCcCCC-------------------chhHHHHHHHHHHh-CCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHH
Q 039623           77 VISTVSRGQ-------------------IPEQAKIIAAVKEA-GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        77 vi~~a~~~~-------------------~~~~~~l~~a~~~~-~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e  135 (292)
                      |||+||...                   +.++.++.+++... + .++||+ |+.......     .....|..+|..++
T Consensus       339 VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~-----~g~~~YaaaKa~ld  412 (511)
T 2z5l_A          339 VFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGN-----AGQGAYAAANAALD  412 (511)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCC-----TTBHHHHHHHHHHH
T ss_pred             EEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCC-----CCCHHHHHHHHHHH
Confidence            999999754                   45667777777654 4 677775 443222221     11234555999998


Q ss_pred             HHHHH---cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEE
Q 039623          136 RAIEA---EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI  212 (292)
Q Consensus       136 ~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  212 (292)
                      .+.+.   .|+++++++||.+.+..+.....       .....     ...+.+++.+|+++++..++..+..   .+.+
T Consensus       413 ~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~-------~~~~~-----~~g~~~l~~e~~a~~l~~al~~~~~---~v~v  477 (511)
T 2z5l_A          413 ALAERRRAAGLPATSVAWGLWGGGGMAAGAG-------EESLS-----RRGLRAMDPDAAVDALLGAMGRNDV---CVTV  477 (511)
T ss_dssp             HHHHHHHTTTCCCEEEEECCBCSTTCCCCHH-------HHHHH-----HHTBCCBCHHHHHHHHHHHHHHTCS---EEEE
T ss_pred             HHHHHHHHcCCcEEEEECCcccCCccccccc-------HHHHH-----hcCCCCCCHHHHHHHHHHHHhCCCC---EEEE
Confidence            88763   68999999998873221110000       00000     1123568999999999999976532   2333


Q ss_pred             cCCCccccHHHHHHHHHH
Q 039623          213 RPPGNVYSFNELVTLWEN  230 (292)
Q Consensus       213 ~~~~~~~t~~e~~~~~~~  230 (292)
                      .    .+.+..+...+..
T Consensus       478 ~----~~d~~~~~~~~~~  491 (511)
T 2z5l_A          478 V----DVDWERFAPATNA  491 (511)
T ss_dssp             C----CBCHHHHHHHHHH
T ss_pred             E----eCCHHHHHhhhcc
Confidence            2    4567777766554

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.63  E-value=2.2e-15  Score=134.28  Aligned_cols=195  Identities=14%  Similarity=0.122  Sum_probs=128.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------c-
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------Q-   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~-   73 (292)
                      ++++||||+|.||.++++.|.++|++|++++|+     ....+..+.....++.++.+|++|.+++.++++       + 
T Consensus       214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~-----~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVD-----GAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECG-----GGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCC-----ccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            479999999999999999999999999999986     222222222233467899999999988887775       3 


Q ss_pred             CCEEEEcCcCCC-------------------chhHHHHHHHHHHh----CCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           74 VDVVISTVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      +|+|||+||...                   +.++.++.+++...    + ..+||. |+.......     .....|..
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~-----~g~~~Yaa  362 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGN-----RGQTNYAT  362 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCC-----TTCHHHHH
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCC-----CCCHHHHH
Confidence            899999999764                   56788888888765    3 456765 443211111     11334555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|++++.+.||++.+.........      ....  .........+...+|+|++++.++..
T Consensus       363 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~--~~~~~~l~r~g~pedvA~~v~fL~s~  434 (454)
T 3u0b_A          363 TKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA------TREV--GRRLNSLFQGGQPVDVAELIAYFASP  434 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CHH--HHHSBTTSSCBCHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh------hHHH--HHhhccccCCCCHHHHHHHHHHHhCC
Confidence            99987777653       589999999999876543221110      0000  00001112345789999999999975


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      ..  ..|+++.+.|.
T Consensus       435 ~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          435 ASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             GGTTCCSCEEEESSS
T ss_pred             ccCCCCCcEEEECCc
Confidence            42  34677777653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.62  E-value=4.1e-15  Score=125.42  Aligned_cols=194  Identities=9%  Similarity=-0.010  Sum_probs=125.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEe-cCCCCCCCcchhhH-hhhh---cCCcEEEECCCCCHH-----------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALV-RESTASDPVKGKLI-EIFK---NLGVNVLYGDLQDHE-----------   65 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~-~~~~---~~~v~~v~~D~~d~~-----------   65 (292)
                      ++++||||+|.||+++++.|+++|++|++++ |+     .++.+.+ +.+.   ..++.++.+|++|.+           
T Consensus        10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A           10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCC-----HHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence            5799999999999999999999999999999 87     4444322 2222   356899999999988           


Q ss_pred             ------HHHHHHc-------cCCEEEEcCcCCC---------------------------------chhHHHHHHHHH--
Q 039623           66 ------SLIKAIK-------QVDVVISTVSRGQ---------------------------------IPEQAKIIAAVK--   97 (292)
Q Consensus        66 ------~~~~~~~-------~~d~vi~~a~~~~---------------------------------~~~~~~l~~a~~--   97 (292)
                            ++.++++       ++|++|||||...                                 +.++..+++++.  
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  8877775       6899999998642                                 223334444443  


Q ss_pred             --HhCC-----cceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccc
Q 039623           98 --EAGN-----VKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLA  162 (292)
Q Consensus        98 --~~~~-----~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~  162 (292)
                        +.+.     ..++|. |+.......     .....|..+|..++.+.+.       .++++..|+||++.... . ..
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~-----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~  237 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPL-----LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP  237 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SC
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCC-----CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CC
Confidence              2220     256665 443222111     1233444599998887763       47999999999987654 2 10


Q ss_pred             cCCCCCCCCCceeecCCCcceE-EeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          163 QIGAPAPPREKVTIFGDGNAGA-VYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ..        ....+....... .+.+++|+|++++.++....  ..|+.+.+.|.
T Consensus       238 ~~--------~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  285 (291)
T 1e7w_A          238 PA--------VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  285 (291)
T ss_dssp             HH--------HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HH--------HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence            00        000000000011 35678999999999997532  24667777643

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.62  E-value=6.6e-15  Score=125.10  Aligned_cols=78  Identities=18%  Similarity=0.267  Sum_probs=62.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhh---hcCCcEEEECCCCCH-HHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIF---KNLGVNVLYGDLQDH-ESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~v~~v~~D~~d~-~~~~~~~~----   72 (292)
                      ++|+||||+|+||+++++.|+++|++|++++|+     .++.+. ++.+   ...++.++.+|++|. +++..+++    
T Consensus        13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A           13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRD-----VTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            469999999999999999999999999999998     444322 2222   234689999999997 77766654    


Q ss_pred             ---cCCEEEEcCcCC
Q 039623           73 ---QVDVVISTVSRG   84 (292)
Q Consensus        73 ---~~d~vi~~a~~~   84 (292)
                         ++|++|||||..
T Consensus        88 ~~g~iD~lv~nAg~~  102 (311)
T 3o26_A           88 HFGKLDILVNNAGVA  102 (311)
T ss_dssp             HHSSCCEEEECCCCC
T ss_pred             hCCCCCEEEECCccc
Confidence               699999999964

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.61  E-value=1.4e-14  Score=123.58  Aligned_cols=187  Identities=12%  Similarity=0.064  Sum_probs=117.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC----CCCcchhhH-hhhhcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA----SDPVKGKLI-EIFKNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |+++||||+|+||+++++.|.++|++|++.+|....    .+.++.+.+ +.+...+.. +.+|+.|.+++.++++    
T Consensus        10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~~~~~   88 (319)
T 1gz6_A           10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVKTALD   88 (319)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999998764210    013333222 233333333 3579998876655543    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         ++|++||+||...                   +.+    ++.++..+++.+ ..++|+ |+.......     .+..
T Consensus        89 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~-----~~~~  162 (319)
T 1gz6_A           89 TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGN-----FGQA  162 (319)
T ss_dssp             HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCC-----CCCH
Confidence               6899999999643                   233    344444445566 677876 442211111     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+++..++||.+ .......       . .         .....+++++|+|.+++.
T Consensus       163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~-------~-~---------~~~~~~~~p~dvA~~~~~  224 (319)
T 1gz6_A          163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV-------M-P---------EDLVEALKPEYVAPLVLW  224 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG-------S-C---------HHHHHHSCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc-------C-C---------hhhhccCCHHHHHHHHHH
Confidence            555599998887763       4799999999887 2211100       0 0         112235789999999999


Q ss_pred             hhcCCcC-CCceEEEc
Q 039623          199 SIDGPRT-LNKTLYIR  213 (292)
Q Consensus       199 ~l~~~~~-~~~~~~~~  213 (292)
                      ++..+.. .|+.|.+.
T Consensus       225 l~s~~~~~tG~~~~v~  240 (319)
T 1gz6_A          225 LCHESCEENGGLFEVG  240 (319)
T ss_dssp             HTSTTCCCCSCEEEEE
T ss_pred             HhCchhhcCCCEEEEC
Confidence            9976432 35555553

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.61  E-value=6.5e-15  Score=121.71  Aligned_cols=195  Identities=14%  Similarity=0.091  Sum_probs=126.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+....            ......+.+|++|++++.++++       ++
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   79 (261)
T 4h15_A           12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQRLGGV   79 (261)
T ss_dssp             CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred             CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999999974311            1223478999999988877765       58


Q ss_pred             CEEEEcCcCCC-------------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcch
Q 039623           75 DVVISTVSRGQ-------------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        75 d~vi~~a~~~~-------------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~  127 (292)
                      |++||+||...                         +..++.++..+++.+ -.++|. |+ .+....      +....+
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~------~~~~~~  152 (261)
T 4h15_A           80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPL------PESTTA  152 (261)
T ss_dssp             SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------TTTCHH
T ss_pred             CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCC------CCccHH
Confidence            99999998532                         345666666777766 567775 33 332211      123466


Q ss_pred             HH-HHHHHHHHHHH-------cCccEEEEecceecccccccccc----CCCCCCC--CCceeecCCCcceEEeeccchHH
Q 039623          128 YA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ----IGAPAPP--REKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       128 ~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                      |. +|..++.+.+.       .|+++..|.||++-.........    .......  .+.............+...+|+|
T Consensus       153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA  232 (261)
T 4h15_A          153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHH
Confidence            65 99998888764       68999999999997653221110    0000000  00000000011112356789999


Q ss_pred             HHHHHhhcCCc--CCCceEEEcCC
Q 039623          194 TYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       194 ~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++++.++.+..  ..|+.+.+.|.
T Consensus       233 ~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          233 NLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhcCccCcEEEECCc
Confidence            99999997543  24677777653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.60  E-value=2e-15  Score=125.08  Aligned_cols=200  Identities=15%  Similarity=0.085  Sum_probs=126.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |.++||||++.||+.+++.|.++|++|.+.+|+     .++.+........+...+.+|++|++++.++++       ++
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~-----~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRR-----KDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            358999999999999999999999999999998     666544433345678899999999998887775       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec--cCCCCCCccCCccCCCCc-chHHHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP--SEFGNDVDRSQNVVEPAK-SAYADK  131 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~--s~~g~~~~~~~~~~~~~~-~~~~~K  131 (292)
                      |++|||||...                   +.++..+.+++.+.= .-.++|.  |..+....       |.. .|..+|
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~-------~~~~~Y~asK  177 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT-------PAFSVYAASK  177 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC-------TTCHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC-------CCchHHHHHH
Confidence            99999999755                   344555555543321 0123443  33332211       233 444599


Q ss_pred             HHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          132 IKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       132 ~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      ..+..+.+.       .|+++..|.||.+-............  ..... ...+........+..++|+|.+++.++.+.
T Consensus       178 aav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~  255 (273)
T 4fgs_A          178 AALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDP--VQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDD  255 (273)
T ss_dssp             HHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CH--HHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCc--hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999888774       57899999999886553322110000  00000 000000001123457899999999999764


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+.+.|.
T Consensus       256 a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          256 SSFVTGAELFVDGG  269 (273)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCccCCeEeECcC
Confidence            3  24777777653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.60  E-value=8.1e-15  Score=122.20  Aligned_cols=198  Identities=11%  Similarity=-0.002  Sum_probs=126.6

Q ss_pred             ceEEEEcc--CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc-hhhHhhhhcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGG--TGYIGKKILEASVKAGHPTFALVRESTASDPVK-GKLIEIFKNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||  +|+||+++++.|.++|++|++++|+     .++ .+.+......++.++.+|++|++++.++++      
T Consensus         8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD-----RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECS-----CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC-----hHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            36999999  9999999999999999999999998     433 222222224468899999999999888876      


Q ss_pred             ----cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCC
Q 039623           73 ----QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 ----~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                          ++|++|||||...                        +.++..+++++.+.- .-.++|. |+.+. ...     .
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~-----~  156 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAM-----P  156 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCC-----T
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-ccc-----C
Confidence                7899999998531                        345556666665431 0135665 44332 111     1


Q ss_pred             CCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc--------eeecCCCcceE-Ee
Q 039623          123 PAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK--------VTIFGDGNAGA-VY  186 (292)
Q Consensus       123 ~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~  186 (292)
                      ....|..+|..++.+.+.       .|+++..++||++...........    .....        ...+....... .+
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~rr~  232 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGG----ALGEEAGAQIQLLEEGWDQRAPIGWNM  232 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTT----TTCHHHHHHHHHHHHHHHHHCTTCCCT
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccc----cchhhHHHHHHHHHHhhhccCCcccCC
Confidence            223444599998887764       489999999999876533211000    00000        00000000011 35


Q ss_pred             eccchHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          187 NKEDDIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       187 i~v~D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      ...+|+|++++.++....  ..|+.+.+.|
T Consensus       233 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  262 (269)
T 2h7i_A          233 KDATPVAKTVCALLSDWLPATTGDIIYADG  262 (269)
T ss_dssp             TCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             CCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence            678999999999997642  2466777764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.60  E-value=2.3e-15  Score=124.80  Aligned_cols=189  Identities=9%  Similarity=0.035  Sum_probs=119.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHh---CCCCEEEEecCCCCCCCcchhhHh-hhh----cCCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGYIGKKILEASVK---AGHPTFALVRESTASDPVKGKLIE-IFK----NLGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~-~~~----~~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      ++++||||+|+||+++++.|++   +|++|++++|+     .++.+.+. .+.    ..++.++.+|++|++++.++++ 
T Consensus         7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCC-----HHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            5699999999999999999999   89999999998     54443322 221    3458899999999998887764 


Q ss_pred             --------cCC--EEEEcCcCC----------C------------chhHHHHHHHHHHhC-----Ccceeec-cCCCCCC
Q 039623           73 --------QVD--VVISTVSRG----------Q------------IPEQAKIIAAVKEAG-----NVKRFLP-SEFGNDV  114 (292)
Q Consensus        73 --------~~d--~vi~~a~~~----------~------------~~~~~~l~~a~~~~~-----~~~~~i~-s~~g~~~  114 (292)
                              .+|  ++|||||..          .            +.++..+++++.+.-     ...++|. |+.....
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence                    358  999999852          1            445666677766532     1345665 4432211


Q ss_pred             ccCCccCCCCcchHHHHHHHHHHHHH-----cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeecc
Q 039623          115 DRSQNVVEPAKSAYADKIKIRRAIEA-----EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKE  189 (292)
Q Consensus       115 ~~~~~~~~~~~~~~~~K~~~e~~~~~-----~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  189 (292)
                      ..     .+...|..+|..++.+.+.     .++++..++||.+............   ........+........+.++
T Consensus       162 ~~-----~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~p  233 (259)
T 1oaa_A          162 PY-----KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS---KDPELRSKLQKLKSDGALVDC  233 (259)
T ss_dssp             CC-----TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC---SCHHHHHHHHHHHHTTCSBCH
T ss_pred             CC-----CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhcc---CChhHHHHHHHhhhcCCcCCH
Confidence            11     1233455599999988774     2477788888887655432211000   000000000000011245789


Q ss_pred             chHHHHHHHhhcCC
Q 039623          190 DDIATYTINSIDGP  203 (292)
Q Consensus       190 ~D~a~~~~~~l~~~  203 (292)
                      +|+|++++.++...
T Consensus       234 ~dvA~~v~~l~~~~  247 (259)
T 1oaa_A          234 GTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999999743

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.59  E-value=5e-15  Score=121.68  Aligned_cols=194  Identities=11%  Similarity=0.081  Sum_probs=117.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEE-e--cCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHH-HH---cc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFAL-V--RESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIK-AI---KQ   73 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~---~~   73 (292)
                      ||+++||||+|+||+++++.|+++|++|+++ +  |+     +++.+.+.... .+.++.  |..+.+.+.+ +.   .+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~-----~~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFAD-----AAERQRFESEN-PGTIAL--AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS-----HHHHHHHHHHS-TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCC-----HHHHHHHHHHh-CCCccc--CHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999 6  87     55543332221 233333  5555433333 22   26


Q ss_pred             CCEEEEcCcCC-----C-----------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           74 VDVVISTVSRG-----Q-----------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        74 ~d~vi~~a~~~-----~-----------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                      +|++||+||..     .                 +.++..++++    +++.+ ..++|. |+.......     +....
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~  146 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPL-----AYNPL  146 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----TTCTT
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCC-----CCchH
Confidence            89999999852     1                 2334444444    44555 577776 443222111     12345


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccc---cccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFL---PTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      |..+|..++.+.+.       .+++++.++||.+.....   .......   . ....  .........+.+.+|+|+++
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~---~-~~~~--~~~~~p~~r~~~pe~vA~~v  220 (244)
T 1zmo_A          147 YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNP---E-LRER--VDRDVPLGRLGRPDEMGALI  220 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCH---H-HHHH--HHHHCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchH---H-HHHH--HhcCCCCCCCcCHHHHHHHH
Confidence            55599999888764       479999999999876643   2110000   0 0000  00000012356889999999


Q ss_pred             HHhhcCCc--CCCceEEEcC
Q 039623          197 INSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~  214 (292)
                      +.++....  ..|+.+.+.|
T Consensus       221 ~~l~s~~~~~~tG~~i~vdg  240 (244)
T 1zmo_A          221 TFLASRRAAPIVGQFFAFTG  240 (244)
T ss_dssp             HHHHTTTTGGGTTCEEEEST
T ss_pred             HHHcCccccCccCCEEEeCC
Confidence            99998643  2366777764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.50  E-value=6e-15  Score=126.39  Aligned_cols=152  Identities=13%  Similarity=0.072  Sum_probs=100.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-------CEEEEecCCCCCCCcchhh-HhhhhcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-------PTFALVRESTASDPVKGKL-IEIFKNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||+||||+||||++++..|++.|+       +|+++++...   .++.+. ..++.+..+.++ +|+.+.+++.+++++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~---~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKD   80 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc---hhhccchhhhhhccccccc-CCeEeccChHHHhCC
Confidence            6899999999999999999999986       7999988621   012111 122322223333 577766667788999


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhCCcc-eee-ccCCCC--CC-ccCCc-cCCCCcchHHHHHHH
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAGNVK-RFL-PSEFGN--DV-DRSQN-VVEPAKSAYADKIKI  134 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~-~~i-~s~~g~--~~-~~~~~-~~~~~~~~~~~K~~~  134 (292)
                      +|+|||+||...             +..++++++++++++..+ +++ +|.-..  .. ..... ..+|.+.|..+|...
T Consensus        81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~  160 (327)
T 1y7t_A           81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH  160 (327)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHH
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHH
Confidence            999999999764             678999999999974122 444 332110  00 00011 234455555599988


Q ss_pred             HHHHH----HcCccEEEEecceecccc
Q 039623          135 RRAIE----AEGIQYTYVSCNCFAGYF  157 (292)
Q Consensus       135 e~~~~----~~~~~~~~ir~~~~~~~~  157 (292)
                      |++..    ..|++.+++|+..++|+.
T Consensus       161 er~~~~~a~~~g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          161 NRAKAQLAKKTGTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             HHHHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred             HHHHHHHHHHhCcChhheeeeEEEcCC
Confidence            88664    368999999987766553

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.48  E-value=2.5e-13  Score=121.87  Aligned_cols=202  Identities=13%  Similarity=0.190  Sum_probs=132.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +++|||||+|.||.++++.|.++|+ +|++++|+.... +...+..+.+.  ..++.++.+|++|.+++.++++      
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADA-PGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCCh-HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            5799999999999999999999998 677888863221 11222233333  3458899999999999999886      


Q ss_pred             cCCEEEEcCcCC-C-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           73 QVDVVISTVSRG-Q-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        73 ~~d~vi~~a~~~-~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      .+|+|||+||.. .                   +.++.++.+++.+.+ ..+||. ||.......     .....|..+|
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~-----~g~~~YaAaK  392 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGS-----GGQPGYAAAN  392 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTC-----TTCHHHHHHH
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCC-----CCcHHHHHHH
Confidence            379999999976 2                   567888888888776 777775 442211111     1123455599


Q ss_pred             HHHHHHHHH---cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCc
Q 039623          132 IKIRRAIEA---EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNK  208 (292)
Q Consensus       132 ~~~e~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~  208 (292)
                      ..++.+.+.   .|++++.|.||.+.+..+......      ...  ..   ......+..++.+.++..++..+..   
T Consensus       393 a~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~------~~~--l~---~~g~~~l~pe~~~~~l~~~l~~~~~---  458 (496)
T 3mje_A          393 AYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEV------HDR--LV---RQGVLAMEPEHALGALDQMLENDDT---  458 (496)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECEESSSCC------------CHH--HH---HTTEEEECHHHHHHHHHHHHHHTCS---
T ss_pred             HHHHHHHHHHHhcCCeEEEEECCcccCCccccChHH------HHH--HH---hcCCCCCCHHHHHHHHHHHHcCCCc---
Confidence            988877664   689999999998865432211000      000  00   1123456788899988888876532   


Q ss_pred             eEEEcCCCccccHHHHHHHH
Q 039623          209 TLYIRPPGNVYSFNELVTLW  228 (292)
Q Consensus       209 ~~~~~~~~~~~t~~e~~~~~  228 (292)
                      ...+   . .+.|..+...+
T Consensus       459 ~~~v---~-~ldw~~~~~~~  474 (496)
T 3mje_A          459 AAAI---T-LMDWEMFAPAF  474 (496)
T ss_dssp             EEEE---C-EECHHHHHHHH
T ss_pred             eEEE---E-EccHHHHHhhh
Confidence            1122   2 45666555443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.46  E-value=5.6e-13  Score=96.49  Aligned_cols=95  Identities=23%  Similarity=0.219  Sum_probs=81.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|+|+|+ |++|+.+++.|.+.| ++|++++|+     +++.+.+   ...++..+.+|+.+.+.+.++++++|+|||
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~-----~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   75 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHD-----LAALAVL---NRMGVATKQVDAKDEAGLAKALGGFDAVIS   75 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESC-----HHHHHHH---HTTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCC-----HHHHHHH---HhCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence            468999999 999999999999999 999999998     6555433   356889999999999999999999999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      +++.   .....++++|.+.+ ++++..+
T Consensus        76 ~~~~---~~~~~~~~~~~~~g-~~~~~~~  100 (118)
T 3ic5_A           76 AAPF---FLTPIIAKAAKAAG-AHYFDLT  100 (118)
T ss_dssp             CSCG---GGHHHHHHHHHHTT-CEEECCC
T ss_pred             CCCc---hhhHHHHHHHHHhC-CCEEEec
Confidence            9963   45789999999998 7777643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.41  E-value=4.3e-13  Score=124.03  Aligned_cols=210  Identities=11%  Similarity=0.038  Sum_probs=123.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC----CCcchhh-HhhhhcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS----DPVKGKL-IEIFKNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|.||+++++.|.++|++|++++|.....    +.++.+. .+.+...+.. +.+|+.|.+++.++++    
T Consensus        20 k~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~~~~   98 (613)
T 3oml_A           20 RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIETAIK   98 (613)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999998832110    1333322 2333333333 3479999887777765    


Q ss_pred             ---cCCEEEEcCcCCC-------------------chhHHHHHHH----HHHhCCcceeec-cCCCCCCccCCccCCCCc
Q 039623           73 ---QVDVVISTVSRGQ-------------------IPEQAKIIAA----VKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-------------------~~~~~~l~~a----~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~  125 (292)
                         .+|++|||||...                   +.++..++++    +++.+ ..++|. |+.......     ....
T Consensus        99 ~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~-----~~~~  172 (613)
T 3oml_A           99 AFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGN-----FGQV  172 (613)
T ss_dssp             ------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCC-----TTCH
T ss_pred             HCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC-----CCCh
Confidence               5899999999753                   3344444444    45555 567776 442211111     1234


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|..+|..++.+.+.       .|+.+..|.|+.+.+...     .    ...         ......+..+|+|.+++.
T Consensus       173 ~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~-----~----~~~---------~~~~~~~~pedvA~~v~~  234 (613)
T 3oml_A          173 NYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE-----G----ILP---------DILFNELKPKLIAPVVAY  234 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------C-----C----CCC---------HHHHTTCCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh-----h----ccc---------hhhhhcCCHHHHHHHHHH
Confidence            555599998888764       478889999986432110     0    000         011223578999999999


Q ss_pred             hhcCCcC-CCceEEEcCC-------------------CccccHHHHHHHHHHHhCCCc
Q 039623          199 SIDGPRT-LNKTLYIRPP-------------------GNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       199 ~l~~~~~-~~~~~~~~~~-------------------~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      ++..... .|+.+.+.|.                   +...+.+++.+.+.+..+...
T Consensus       235 L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~~  292 (613)
T 3oml_A          235 LCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSK  292 (613)
T ss_dssp             TTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCTT
T ss_pred             hcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhcccc
Confidence            9976522 3445544321                   123577778877777766543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.38  E-value=4.3e-12  Score=115.06  Aligned_cols=203  Identities=12%  Similarity=0.065  Sum_probs=129.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEE-ecCCCC----------CCCcchhhHhhhh--cCCcEEEECCCCCHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFAL-VRESTA----------SDPVKGKLIEIFK--NLGVNVLYGDLQDHESL   67 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~----------~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~   67 (292)
                      +++|||||+|.||.++++.|.++|++ |.++ +|+...          . +...+..+.+.  ...+.++.+|++|.+++
T Consensus       252 ~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v  330 (525)
T 3qp9_A          252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAED-SGLAGLVAELADLGATATVVTCDLTDAEAA  330 (525)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC----------------CHHHHHHHHHHTCEEEEEECCTTSHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccC-HHHHHHHHHHHhcCCEEEEEECCCCCHHHH
Confidence            46999999999999999999999988 5555 676422          1 11222233332  34689999999999999


Q ss_pred             HHHHcc------CCEEEEcCcCCC-------------------chhHHHHHHHHHHhCC----cceeec-cCCCCCCccC
Q 039623           68 IKAIKQ------VDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGN----VKRFLP-SEFGNDVDRS  117 (292)
Q Consensus        68 ~~~~~~------~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~----~~~~i~-s~~g~~~~~~  117 (292)
                      .++++.      +|.|||+||...                   +.++.++.+++.....    ..+||. |+....... 
T Consensus       331 ~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~-  409 (525)
T 3qp9_A          331 ARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG-  409 (525)
T ss_dssp             HHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC-
T ss_pred             HHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC-
Confidence            999864      699999999754                   5677888888776541    345654 443222221 


Q ss_pred             CccCCCCcchHHHHHHHHHHHHH---cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          118 QNVVEPAKSAYADKIKIRRAIEA---EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                          .....|..+|..++.+.++   .|++++.|.||.+..........       ...+  ..   .....+..+++++
T Consensus       410 ----~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~~-------~~~~--~~---~g~~~l~pee~a~  473 (525)
T 3qp9_A          410 ----AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTEGAT-------GERL--RR---LGLRPLAPATALT  473 (525)
T ss_dssp             ----TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGSSHH-------HHHH--HH---TTBCCBCHHHHHH
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccchhh-------HHHH--Hh---cCCCCCCHHHHHH
Confidence                1123455599999888764   57999999999884332210000       0000  00   0123477899999


Q ss_pred             HHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHH
Q 039623          195 YTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWE  229 (292)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~  229 (292)
                      ++..++..+..   ...+.    .+.|..+...+.
T Consensus       474 ~l~~~l~~~~~---~v~v~----~~dw~~~~~~~~  501 (525)
T 3qp9_A          474 ALDTALGHGDT---AVTIA----DVDWSSFAPGFT  501 (525)
T ss_dssp             HHHHHHHHTCS---EEEEC----CBCHHHHHHHHH
T ss_pred             HHHHHHhCCCC---eEEEE----eCCHHHHHhhcc
Confidence            99999876532   22232    456666666554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.33  E-value=5e-12  Score=106.76  Aligned_cols=203  Identities=9%  Similarity=0.035  Sum_probs=113.7

Q ss_pred             ceEEEEccC--CcchHHHHHHHHhCCCCEEEEecCCCC------CCCcchhhHhhhhcCC----cEEEECC--------C
Q 039623            2 AATLIIGGT--GYIGKKILEASVKAGHPTFALVRESTA------SDPVKGKLIEIFKNLG----VNVLYGD--------L   61 (292)
Q Consensus         2 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~----v~~v~~D--------~   61 (292)
                      ++++||||+  |+||+++++.|.++|++|++++|++..      .+.++.+.++.+...+    ...+.+|        +
T Consensus         9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv   88 (297)
T 1d7o_A            9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV   88 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhh
Confidence            579999999  999999999999999999999864100      0011111111111111    2333333        2


Q ss_pred             C----C--------HHHHHHHH-------ccCCEEEEcCcCC----C-----------------chhHHHHHHHHHHhC-
Q 039623           62 Q----D--------HESLIKAI-------KQVDVVISTVSRG----Q-----------------IPEQAKIIAAVKEAG-  100 (292)
Q Consensus        62 ~----d--------~~~~~~~~-------~~~d~vi~~a~~~----~-----------------~~~~~~l~~a~~~~~-  100 (292)
                      .    |        ++++.+++       .++|++|||||..    .                 +.++..+++++.+.= 
T Consensus        89 ~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  168 (297)
T 1d7o_A           89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN  168 (297)
T ss_dssp             CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence            2    1        22333333       3689999999842    1                 456677777776541 


Q ss_pred             Ccceeec-cCCCCCCccCCccCCCC-cchHHHHHHHHHHHHH--------cCccEEEEecceeccccccccccCCCCCCC
Q 039623          101 NVKRFLP-SEFGNDVDRSQNVVEPA-KSAYADKIKIRRAIEA--------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPP  170 (292)
Q Consensus       101 ~~~~~i~-s~~g~~~~~~~~~~~~~-~~~~~~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~  170 (292)
                      .-.++|. |+.......     +.. ..|..+|..++.+.+.        .|+++..++||.+.+.........      
T Consensus       169 ~~g~iv~isS~~~~~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~------  237 (297)
T 1d7o_A          169 PGGASISLTYIASERII-----PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI------  237 (297)
T ss_dssp             EEEEEEEEECGGGTSCC-----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH------
T ss_pred             cCceEEEEeccccccCC-----CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc------
Confidence            0145655 332211111     112 2455599998877652        589999999999877643211000      


Q ss_pred             CCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          171 REKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       171 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ...............+.+++|+|++++.++....  ..|+.+++.|.
T Consensus       238 ~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            0000000000011234688999999999997532  24667777643

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.28  E-value=1.8e-11  Score=104.35  Aligned_cols=209  Identities=9%  Similarity=0.044  Sum_probs=99.5

Q ss_pred             ceEEEEcc--CCcchHHHHHHHHhCCCCEEEEecCC------CCCCCcchh------------hHhhhhcCC-----cEE
Q 039623            2 AATLIIGG--TGYIGKKILEASVKAGHPTFALVRES------TASDPVKGK------------LIEIFKNLG-----VNV   56 (292)
Q Consensus         2 ~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~------~~~~~~~~~------------~~~~~~~~~-----v~~   56 (292)
                      ++++||||  +|.||+++++.|+++|++|++++|++      ...+.++.+            ..+.+...+     ...
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (319)
T 2ptg_A           10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKI   89 (319)
T ss_dssp             CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccc
Confidence            35999999  89999999999999999999998741      000011111            011111111     355


Q ss_pred             EECCC------------CC--------HHHHHHHH-------ccCCEEEEcCcCC----C-----------------chh
Q 039623           57 LYGDL------------QD--------HESLIKAI-------KQVDVVISTVSRG----Q-----------------IPE   88 (292)
Q Consensus        57 v~~D~------------~d--------~~~~~~~~-------~~~d~vi~~a~~~----~-----------------~~~   88 (292)
                      +.+|+            +|        .+++.+++       ..+|++|||||..    .                 +.+
T Consensus        90 ~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g  169 (319)
T 2ptg_A           90 YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYS  169 (319)
T ss_dssp             EECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHH
T ss_pred             ccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHH
Confidence            55543            11        12333333       2689999999843    1                 445


Q ss_pred             HHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCC-cchHHHHHHHHHHHHH--------cCccEEEEecceecccc
Q 039623           89 QAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPA-KSAYADKIKIRRAIEA--------EGIQYTYVSCNCFAGYF  157 (292)
Q Consensus        89 ~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~-~~~~~~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~  157 (292)
                      +..+++++.+.= .-.++|. |+.......     ... ..|..+|..++.+.+.        .|+++..|+||++....
T Consensus       170 ~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          170 FVSLLQHFLPLMKEGGSALALSYIASEKVI-----PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             HHHHHHHHGGGEEEEEEEEEEEECC-----------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred             HHHHHHHHHHHHhcCceEEEEecccccccc-----CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence            666677765531 0145554 332221111     112 2455599887776541        58999999999987654


Q ss_pred             ccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          158 LPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ............................+..++|+|++++.++....  ..|+.+.+.|.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          245 ASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             ----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            32211000000000000000001112245688999999999997532  34667777654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.27  E-value=3.8e-10  Score=104.01  Aligned_cols=203  Identities=14%  Similarity=0.075  Sum_probs=126.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc--CCcEEEECCC-CCHHHHHH-H---HccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN--LGVNVLYGDL-QDHESLIK-A---IKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~-~d~~~~~~-~---~~~~   74 (292)
                      +.++||||++.||+.+++.|.++|++|++.+|..    .+  +..+.+..  ..+..+.+|+ .+.+.+.+ +   +..+
T Consensus       323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~----~~--~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD----AT--KTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC----CH--HHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc----HH--HHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            4699999999999999999999999999987641    11  11222222  2355677888 55444322 2   3369


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++|||||...                       +..++.++..+++.+ -.++|. |+ .|.. ..     .....|..
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~-~~-----~~~~~Y~a  469 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIY-GN-----FGQANYSS  469 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHS-CC-----TTBHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc-CC-----CCChhHHH
Confidence            99999999743                       344555666666555 467775 43 2221 11     11234555


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..+..+.+.       .|+++..|.|+. ........       . ...         .......+|+|.+++.++..
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~-------~-~~~---------~~~~~~pe~vA~~v~~L~s~  531 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI-------M-REQ---------DKNLYHADQVAPLLVYLGTD  531 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------------CCSSCGGGTHHHHHHTTST
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc-------C-chh---------hccCCCHHHHHHHHHHHhCC
Confidence            99998887763       578899999974 22111000       0 000         11235789999999999875


Q ss_pred             Cc-CCCceEEEcCC----------------CccccHHHHHHHHHHHhCCC
Q 039623          203 PR-TLNKTLYIRPP----------------GNVYSFNELVTLWENKIGKT  235 (292)
Q Consensus       203 ~~-~~~~~~~~~~~----------------~~~~t~~e~~~~~~~~~~~~  235 (292)
                      .. ..|+.+.+.|.                ...++..++.+.+.+....+
T Consensus       532 ~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          532 DVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             TCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             ccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            33 34556665542                22468888888888876654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.25  E-value=9.7e-12  Score=105.90  Aligned_cols=205  Identities=9%  Similarity=0.037  Sum_probs=113.2

Q ss_pred             ceEEEEcc--CCcchHHHHHHHHhCCCCEEEEecCCC------CCCCcchhhHhhhhcCC----cEEEECCC--------
Q 039623            2 AATLIIGG--TGYIGKKILEASVKAGHPTFALVREST------ASDPVKGKLIEIFKNLG----VNVLYGDL--------   61 (292)
Q Consensus         2 ~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~----v~~v~~D~--------   61 (292)
                      ++++||||  +|.||+++++.|.++|++|++++|++.      ..+.++.+.++.+...+    +..+.+|+        
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   89 (315)
T 2o2s_A           10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV   89 (315)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred             CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence            46999999  899999999999999999999987520      00011121112111111    34555543        


Q ss_pred             ----CC--------HHHHHHHH-------ccCCEEEEcCcCC----C-----------------chhHHHHHHHHHHhC-
Q 039623           62 ----QD--------HESLIKAI-------KQVDVVISTVSRG----Q-----------------IPEQAKIIAAVKEAG-  100 (292)
Q Consensus        62 ----~d--------~~~~~~~~-------~~~d~vi~~a~~~----~-----------------~~~~~~l~~a~~~~~-  100 (292)
                          +|        .+++.+++       .++|++|||||..    .                 +.++..+++++.+.= 
T Consensus        90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  169 (315)
T 2o2s_A           90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMN  169 (315)
T ss_dssp             CHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEE
T ss_pred             hhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence                21        22343333       3689999999853    1                 445566666665431 


Q ss_pred             Ccceeec-cCCCCCCccCCccCCCC-cchHHHHHHHHHHHHH--------cCccEEEEecceeccccccccccCCCCCCC
Q 039623          101 NVKRFLP-SEFGNDVDRSQNVVEPA-KSAYADKIKIRRAIEA--------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPP  170 (292)
Q Consensus       101 ~~~~~i~-s~~g~~~~~~~~~~~~~-~~~~~~K~~~e~~~~~--------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~  170 (292)
                      .-.++|. |+.......     ... ..|..+|..++.+.+.        .|+++..|+||++...........    ..
T Consensus       170 ~~g~Iv~isS~~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~  240 (315)
T 2o2s_A          170 EGGSAVTLSYLAAERVV-----PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKS----GE  240 (315)
T ss_dssp             EEEEEEEEEEGGGTSCC-----TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCS----SS
T ss_pred             cCCEEEEEecccccccC-----CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccc----cc
Confidence            0135554 332211111     112 2455599998877652        589999999999876543221100    00


Q ss_pred             CCceee----cCCCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          171 REKVTI----FGDGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       171 ~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ......    .........+..++|+|++++.++....  ..|+.+.+.|.
T Consensus       241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             SCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            000000    0000011234688999999999997532  24667777643

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.24  E-value=3.8e-11  Score=102.86  Aligned_cols=151  Identities=10%  Similarity=0.014  Sum_probs=94.3

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCC----CCCcchhhHhhh------hcCCcEEEECCCCCH--H--
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTA----SDPVKGKLIEIF------KNLGVNVLYGDLQDH--E--   65 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~~~------~~~~v~~v~~D~~d~--~--   65 (292)
                      ++++||||++  .||.++++.|.++|++|++.+|++..    .+.++.+.....      ....+.++.+|+++.  +  
T Consensus         3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence            5799999875  89999999999999999977765200    001111111111      112367888899876  5  


Q ss_pred             ----------------HHHHHHc-------cCCEEEEcCcCC---C------------------chhHHHHHHHHHHhC-
Q 039623           66 ----------------SLIKAIK-------QVDVVISTVSRG---Q------------------IPEQAKIIAAVKEAG-  100 (292)
Q Consensus        66 ----------------~~~~~~~-------~~d~vi~~a~~~---~------------------~~~~~~l~~a~~~~~-  100 (292)
                                      ++.++++       .+|++|||||..   .                  +.++..+.+++...= 
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            5555543       589999999853   1                  445556666654431 


Q ss_pred             Ccceeec-cC-CCCCCccCCccCCCCc-chHHHHHHHHHHHH-------H-cCccEEEEecceeccccc
Q 039623          101 NVKRFLP-SE-FGNDVDRSQNVVEPAK-SAYADKIKIRRAIE-------A-EGIQYTYVSCNCFAGYFL  158 (292)
Q Consensus       101 ~~~~~i~-s~-~g~~~~~~~~~~~~~~-~~~~~K~~~e~~~~-------~-~~~~~~~ir~~~~~~~~~  158 (292)
                      .-.++|. |+ .+....      .... .|..+|..++.+.+       . .++++..+.||++.....
T Consensus       163 ~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~  225 (329)
T 3lt0_A          163 PQSSIISLTYHASQKVV------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAA  225 (329)
T ss_dssp             EEEEEEEEECGGGTSCC------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
T ss_pred             hCCeEEEEeCccccCCC------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhH
Confidence            0035554 33 332211      1122 45559999887765       2 589999999999976643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.17  E-value=2.4e-10  Score=105.27  Aligned_cols=205  Identities=10%  Similarity=0.031  Sum_probs=122.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC----CCcchhh-HhhhhcCCcEEEECCCCCHHHHHHH------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS----DPVKGKL-IEIFKNLGVNVLYGDLQDHESLIKA------   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~------   70 (292)
                      +.++||||++.||+.+++.|.++|++|.+.+|+....    +.++.+. .+.+...+-+. .+|+.|.++..++      
T Consensus         9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~~~~   87 (604)
T 2et6_A            9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVETAVK   87 (604)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHHHHH
Confidence            4699999999999999999999999999998763100    0123322 23333333232 2455554322222      


Q ss_pred             -HccCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCC
Q 039623           71 -IKQVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPA  124 (292)
Q Consensus        71 -~~~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~  124 (292)
                       +..+|++|||||...                       +..++.++..+++.+ -.++|. |+ .|.. ..      |.
T Consensus        88 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~-~~------~~  159 (604)
T 2et6_A           88 NFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLY-GN------FG  159 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-CC------TT
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC-CC------CC
Confidence             336999999999643                       345666666666665 467775 43 2211 11      22


Q ss_pred             c-chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          125 K-SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       125 ~-~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      . .|..+|..+..+.+.       .|+++..|.|+. .....    ..    ... .        ........+|+|.++
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T~m~----~~----~~~-~--------~~~~~~~pe~vA~~v  221 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RSRMT----ES----IMP-P--------PMLEKLGPEKVAPLV  221 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCHHH----HT----TSC-H--------HHHTTCSHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cCccc----cc----cCC-h--------hhhccCCHHHHHHHH
Confidence            3 455599998887763       578888898863 21110    00    000 0        001124789999999


Q ss_pred             HHhhcCCcC-CCceEEEcCC-----------------CccccHHHHHHHHHHHhC
Q 039623          197 INSIDGPRT-LNKTLYIRPP-----------------GNVYSFNELVTLWENKIG  233 (292)
Q Consensus       197 ~~~l~~~~~-~~~~~~~~~~-----------------~~~~t~~e~~~~~~~~~~  233 (292)
                      +.++..... .|+.+.+.|.                 +...+..++.+.+.+...
T Consensus       222 ~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          222 LYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             HHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             HHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            999976522 3455554432                 235678889888877654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.16  E-value=2.8e-10  Score=111.09  Aligned_cols=182  Identities=15%  Similarity=0.121  Sum_probs=108.1

Q ss_pred             ceEEEEccCCc-chHHHHHHHHhCCCCEEEEe-cCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGY-IGKKILEASVKAGHPTFALV-RESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      ++++||||+|. ||+++++.|+++|++|++++ |+.... .+..+.+ +.+.  ...+.++.+|++|.+++.++++    
T Consensus       477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~l-ee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e  555 (1688)
T 2pff_A          477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV-TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  555 (1688)
T ss_dssp             CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTT-TTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHS
T ss_pred             CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHH-HHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            46999999998 99999999999999999984 542211 1111111 1111  2357889999999988887763    


Q ss_pred             ---------cCCEEEEcCcCCC----------------------chhHHHHHHHHHHhCC-----cceeec-cC-CCCCC
Q 039623           73 ---------QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEAGN-----VKRFLP-SE-FGNDV  114 (292)
Q Consensus        73 ---------~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~~~-----~~~~i~-s~-~g~~~  114 (292)
                               .+|++||+||...                      +.++..++++++....     -.++|. |+ .+...
T Consensus       556 ~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G  635 (1688)
T 2pff_A          556 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG  635 (1688)
T ss_dssp             CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS
T ss_pred             hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC
Confidence                     4899999998531                      2334455555532210     135665 43 23211


Q ss_pred             ccCCccCCCCcchHHHHHHHHHHHHH-----cC--ccEEEEecceecc-ccccccccCCCCCCCCCceeecCCCcceEEe
Q 039623          115 DRSQNVVEPAKSAYADKIKIRRAIEA-----EG--IQYTYVSCNCFAG-YFLPTLAQIGAPAPPREKVTIFGDGNAGAVY  186 (292)
Q Consensus       115 ~~~~~~~~~~~~~~~~K~~~e~~~~~-----~~--~~~~~ir~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (292)
                              ....|..+|..++.++..     .+  ++++.+.||++.+ ...... ..     ........     ....
T Consensus       636 --------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e~-----~~~~l~~i-----plR~  696 (1688)
T 2pff_A          636 --------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NI-----IAEGIEKM-----GVRT  696 (1688)
T ss_dssp             --------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT-TT-----CSTTTSSS-----SCCC
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc-hH-----HHHHHHhC-----CCCC
Confidence                    134566699999998432     12  5555566766652 221110 00     00000000     1123


Q ss_pred             eccchHHHHHHHhhcCC
Q 039623          187 NKEDDIATYTINSIDGP  203 (292)
Q Consensus       187 i~v~D~a~~~~~~l~~~  203 (292)
                      ...+|+|.+++.++...
T Consensus       697 ~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          697 FSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             CCCCTTHHHHHHHTSTT
T ss_pred             CCHHHHHHHHHHHhCCC
Confidence            47899999999999765

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.10  E-value=1.4e-09  Score=109.32  Aligned_cols=203  Identities=12%  Similarity=0.040  Sum_probs=119.6

Q ss_pred             ceEEEEccCCc-chHHHHHHHHhCCCCEEEEe-cCCCCCCCcchhh-Hhhh----h--cCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGY-IGKKILEASVKAGHPTFALV-RESTASDPVKGKL-IEIF----K--NLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~-~~~~----~--~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      ++++||||+|. ||+++++.|+++|++|++++ |+     .++.+. .+.+    .  ...+.++.+|++|.+++.++++
T Consensus       676 KvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~-----~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          676 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRF-----SKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             CEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSC-----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            46999999998 99999999999999999985 54     333321 1222    1  3357889999999998887763


Q ss_pred             -------------cCCEEEEcCcCCC----------------------chhHHHHHHHHHHhCC-----cceeec-cCCC
Q 039623           73 -------------QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEAGN-----VKRFLP-SEFG  111 (292)
Q Consensus        73 -------------~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~~~-----~~~~i~-s~~g  111 (292)
                                   .+|++|||||...                      +.++..++++++....     -.++|. |+..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                         4899999999642                      2233345555533321     135665 4322


Q ss_pred             CCCccCCccCCCCcchHHHHHHHHHH-HHH----c--CccEEEEecceec-cccccccccCCCCCCCCCceeecCCCcce
Q 039623          112 NDVDRSQNVVEPAKSAYADKIKIRRA-IEA----E--GIQYTYVSCNCFA-GYFLPTLAQIGAPAPPREKVTIFGDGNAG  183 (292)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~K~~~e~~-~~~----~--~~~~~~ir~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (292)
                      .....       ...|..+|..++.+ .+.    .  .++++.+.||++. ....... .     ......  ...+   
T Consensus       831 g~~gg-------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~-----~~~~~~--~~~p---  892 (1887)
T 2uv8_A          831 GTFGG-------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-N-----IIAEGI--EKMG---  892 (1887)
T ss_dssp             TCSSC-------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-C-----TTHHHH--HTTS---
T ss_pred             hccCC-------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-h-----hHHHHH--HhcC---
Confidence            21111       33566699998887 331    1  2778888898886 3322110 0     000000  0001   


Q ss_pred             EEeeccchHHHHHHHhhcCC-c--CCCceEEE---cCCCccccHHHHHHH
Q 039623          184 AVYNKEDDIATYTINSIDGP-R--TLNKTLYI---RPPGNVYSFNELVTL  227 (292)
Q Consensus       184 ~~~i~v~D~a~~~~~~l~~~-~--~~~~~~~~---~~~~~~~t~~e~~~~  227 (292)
                      ..+...+|+|.+++.++... .  ..|..+.+   .|-.....+.++...
T Consensus       893 lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~  942 (1887)
T 2uv8_A          893 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK  942 (1887)
T ss_dssp             CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHH
Confidence            12347899999999999764 1  12455555   232223345555443

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.09  E-value=8.3e-10  Score=82.39  Aligned_cols=95  Identities=19%  Similarity=0.206  Sum_probs=76.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~   79 (292)
                      |++|+|+|+ |.+|+.+++.|.+.|++|++++++     +++.+.   +...++.++.+|.+|++.+.++ +.++|+||.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~-----~~~~~~---~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~   76 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKS-----KEKIEL---LEDEGFDAVIADPTDESFYRSLDLEGVSAVLI   76 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESC-----HHHHHH---HHHTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECC-----HHHHHH---HHHCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence            468999996 999999999999999999999998     655533   3356789999999999988776 457999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +.+.  ......++..+++.+ ..+++.
T Consensus        77 ~~~~--~~~n~~~~~~a~~~~-~~~iia  101 (141)
T 3llv_A           77 TGSD--DEFNLKILKALRSVS-DVYAIV  101 (141)
T ss_dssp             CCSC--HHHHHHHHHHHHHHC-CCCEEE
T ss_pred             ecCC--HHHHHHHHHHHHHhC-CceEEE
Confidence            8883  345566777788877 666664

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.09  E-value=3.8e-09  Score=91.17  Aligned_cols=188  Identities=17%  Similarity=0.097  Sum_probs=113.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHh-CCCCEEEEecCCCCCCCcc--------hhhHh-hh--hcCCcEEEECCCCCHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVK-AGHPTFALVRESTASDPVK--------GKLIE-IF--KNLGVNVLYGDLQDHESLIK   69 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~--------~~~~~-~~--~~~~v~~v~~D~~d~~~~~~   69 (292)
                      |++|||||++.||+++++.|.+ +|++|.+++|+.... ..+        ...+. .+  ....+..+.+|++|++++.+
T Consensus        48 KvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~-~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~  126 (405)
T 3zu3_A           48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGE-EGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL  126 (405)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCB-TTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhh-hhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            5699999999999999999999 999999999875432 111        01111 11  23457889999999988877


Q ss_pred             HHc-------cCCEEEEcCcCC---------------------------------------C------------ch--hH
Q 039623           70 AIK-------QVDVVISTVSRG---------------------------------------Q------------IP--EQ   89 (292)
Q Consensus        70 ~~~-------~~d~vi~~a~~~---------------------------------------~------------~~--~~   89 (292)
                      +++       ++|++||+||..                                       .            +.  +.
T Consensus       127 ~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~  206 (405)
T 3zu3_A          127 TIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGED  206 (405)
T ss_dssp             HHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhH
Confidence            764       589999999863                                       1            11  11


Q ss_pred             H-HHHHHHHHhCCc----ceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-------c-CccEEEEecceecc
Q 039623           90 A-KIIAAVKEAGNV----KRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------E-GIQYTYVSCNCFAG  155 (292)
Q Consensus        90 ~-~l~~a~~~~~~~----~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~-~~~~~~ir~~~~~~  155 (292)
                      . .+++++.... .    .++|. |+.+.....   +......|..+|..++.+.+.       . |+++..+.||.+-.
T Consensus       207 ~~~~~~~~~~~~-m~~~gG~IVniSSi~~~~~~---p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          207 WQMWIDALLDAG-VLAEGAQTTAFTYLGEKITH---DIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             HHHHHHHHHHHT-CEEEEEEEEEEECCCCGGGT---TTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             HHHHHHHHHHHh-hhhCCcEEEEEeCchhhCcC---CCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            1 3344443332 2    24554 444432221   000013455599998888763       5 88999999998876


Q ss_pred             ccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          156 YFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      .......        ..+.....-.......-..+|+++++..++..
T Consensus       283 ~~s~~ip--------~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          283 QASSAIP--------MMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHHHTST--------THHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             chhhcCC--------CCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence            5322110        00000000000122334568999999999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.07  E-value=8.3e-10  Score=104.79  Aligned_cols=146  Identities=16%  Similarity=0.238  Sum_probs=102.2

Q ss_pred             ceEEEEccCCcchHHHHHHHH-hCCCC-EEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASV-KAGHP-TFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~-~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      ++++||||+|.||+.+++.|. ++|++ |+.++|+.... +...+.++++.  ..++.++.+|++|.+++.++++     
T Consensus       531 ~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~  609 (795)
T 3slk_A          531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAA-SGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDE  609 (795)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccch-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Confidence            469999999999999999999 78984 88889974322 22223334443  3458889999999999999886     


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                       .+|.|||+||...                   +.++.++.+++. .. . +||. ||.......     .....|..+|
T Consensus       610 ~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~-l-~iV~~SS~ag~~g~-----~g~~~YaAak  681 (795)
T 3slk_A          610 HPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PD-V-ALVLFSSVSGVLGS-----GGQGNYAAAN  681 (795)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TT-S-EEEEEEETHHHHTC-----SSCHHHHHHH
T ss_pred             CCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hC-C-EEEEEccHHhcCCC-----CCCHHHHHHH
Confidence             3699999999754                   567778877762 22 4 5554 443211111     1133555599


Q ss_pred             HHHHHHHH---HcCccEEEEecceeccc
Q 039623          132 IKIRRAIE---AEGIQYTYVSCNCFAGY  156 (292)
Q Consensus       132 ~~~e~~~~---~~~~~~~~ir~~~~~~~  156 (292)
                      ...+.+.+   ..|++++.|.||.+.+.
T Consensus       682 a~~~alA~~~~~~Gi~v~sI~pG~v~t~  709 (795)
T 3slk_A          682 SFLDALAQQRQSRGLPTRSLAWGPWAEH  709 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred             HHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence            87666654   47899999999988754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.05  E-value=9.3e-10  Score=96.67  Aligned_cols=100  Identities=20%  Similarity=0.208  Sum_probs=79.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC---CCEEEEecCCCCCCCcchhhHhhh-hc---CCcEEEECCCCCHHHHHHHHcc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG---HPTFALVRESTASDPVKGKLIEIF-KN---LGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~-~~---~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |++|+|+|| |++|+.+++.|.++|   .+|.+.+|+     .++.+.+... ..   .++..+.+|++|.+++.+++++
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~-----~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~   74 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRT-----LSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE   74 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESC-----HHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECC-----HHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence            899999998 999999999999998   389999998     6666544332 22   3689999999999999999987


Q ss_pred             --CCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccCC
Q 039623           74 --VDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEF  110 (292)
Q Consensus        74 --~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~  110 (292)
                        +|+|||+++..   ....++++|.+.+ +..+-.+.+
T Consensus        75 ~~~DvVin~ag~~---~~~~v~~a~l~~g-~~vvD~a~~  109 (405)
T 4ina_A           75 VKPQIVLNIALPY---QDLTIMEACLRTG-VPYLDTANY  109 (405)
T ss_dssp             HCCSEEEECSCGG---GHHHHHHHHHHHT-CCEEESSCC
T ss_pred             hCCCEEEECCCcc---cChHHHHHHHHhC-CCEEEecCC
Confidence              99999999864   3578889999998 554434443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.04  E-value=1.7e-09  Score=80.68  Aligned_cols=96  Identities=17%  Similarity=0.270  Sum_probs=74.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~   79 (292)
                      |++|+|+|+ |.+|+.+++.|.+.|++|++++|+     +++.+.   +...+...+.+|..+.+.+.++ +.++|+||+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~-----~~~~~~---~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~   76 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-----EEKVNA---YASYATHAVIANATEENELLSLGIRNFEYVIV   76 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-----HHHHHT---TTTTCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHH---HHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence            357999997 999999999999999999999997     444432   2334677889999998888776 678999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +++.. ......+.+.+++.+ .++++.
T Consensus        77 ~~~~~-~~~~~~~~~~~~~~~-~~~ii~  102 (144)
T 2hmt_A           77 AIGAN-IQASTLTTLLLKELD-IPNIWV  102 (144)
T ss_dssp             CCCSC-HHHHHHHHHHHHHTT-CSEEEE
T ss_pred             CCCCc-hHHHHHHHHHHHHcC-CCeEEE
Confidence            99864 233445777788887 666664

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.03  E-value=6.3e-09  Score=91.12  Aligned_cols=82  Identities=22%  Similarity=0.251  Sum_probs=62.8

Q ss_pred             ceEEEEccCCcchHH--HHHHHHhCCCCEEEEecCCCCCCCcc--------hhhHhhh---hcCCcEEEECCCCCHHHHH
Q 039623            2 AATLIIGGTGYIGKK--ILEASVKAGHPTFALVRESTASDPVK--------GKLIEIF---KNLGVNVLYGDLQDHESLI   68 (292)
Q Consensus         2 ~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~---~~~~v~~v~~D~~d~~~~~   68 (292)
                      ++++||||++.||.+  +++.|.++|++|++++|+.... ..+        .+.+...   ....+..+.+|++|.+++.
T Consensus        61 K~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~  139 (418)
T 4eue_A           61 KKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGAT-DRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD  139 (418)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCC-SSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchh-hhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence            579999999999999  9999999999999999975432 111        1222222   2345889999999998887


Q ss_pred             HHHc-------cCCEEEEcCcCC
Q 039623           69 KAIK-------QVDVVISTVSRG   84 (292)
Q Consensus        69 ~~~~-------~~d~vi~~a~~~   84 (292)
                      ++++       ++|++||+||..
T Consensus       140 ~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          140 KVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHcCCCCEEEECCccc
Confidence            7764       589999999863

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.00  E-value=5.8e-09  Score=90.83  Aligned_cols=81  Identities=21%  Similarity=0.250  Sum_probs=61.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHh-CCCCEEEEecCCCCCCCcc--------hhhH-hhhh--cCCcEEEECCCCCHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVK-AGHPTFALVRESTASDPVK--------GKLI-EIFK--NLGVNVLYGDLQDHESLIK   69 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~--------~~~~-~~~~--~~~v~~v~~D~~d~~~~~~   69 (292)
                      |++|||||++.||+++++.|.+ +|++|.+++|+.... .++        ...+ +.+.  ...+..+.+|++|++++.+
T Consensus        62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~-~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~  140 (422)
T 3s8m_A           62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGT-ASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ  140 (422)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCC-SSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhh-hhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            5799999999999999999999 999999999985432 111        0111 1222  3457889999999988766


Q ss_pred             HHc--------cCCEEEEcCcC
Q 039623           70 AIK--------QVDVVISTVSR   83 (292)
Q Consensus        70 ~~~--------~~d~vi~~a~~   83 (292)
                      +++        ++|++||+||.
T Consensus       141 ~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          141 VIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHcCCCCCEEEEcCcc
Confidence            653        47999999986

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.97  E-value=2.8e-09  Score=94.72  Aligned_cols=94  Identities=20%  Similarity=0.289  Sum_probs=73.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| +|++|+++++.|.+.|++|++.+|+     +++.+.+... ..++..+.+|+.|.+++.++++++|+|||++
T Consensus         4 k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~-----~~~a~~la~~-~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            4 KSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESS-----HHHHHHTTTT-CTTEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECC-----HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            6799998 8999999999999999999999998     5555333221 1247788999999999999999999999999


Q ss_pred             cCCC---------------------chhHHHHHHHHHHhCCcc
Q 039623           82 SRGQ---------------------IPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        82 ~~~~---------------------~~~~~~l~~a~~~~~~~~  103 (292)
                      +...                     ......++++|+++| ++
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~  118 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-IT  118 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CE
T ss_pred             ccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-Ce
Confidence            8643                     124567777888777 54

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.94  E-value=9.4e-09  Score=103.18  Aligned_cols=204  Identities=11%  Similarity=0.074  Sum_probs=119.6

Q ss_pred             ceEEEEccCCc-chHHHHHHHHhCCCCEEEEecCCCCCCCcchh-hH----hhhh--cCCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGY-IGKKILEASVKAGHPTFALVRESTASDPVKGK-LI----EIFK--NLGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~----~~~~--~~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      +++|||||+|. ||.++++.|.++|++|++++++.    .++.+ ..    +.+.  ...+.++.+|++|.+++.++++ 
T Consensus       653 KvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~----~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          653 KHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRF----SRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSC----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC----hHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            46999999999 99999999999999999986442    33321 11    1221  3357889999999999888764 


Q ss_pred             ----------cCCEEEEcCcCCC----------------------chhHHHHHHHHHHhCC-----cceeec-cC-CCCC
Q 039623           73 ----------QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEAGN-----VKRFLP-SE-FGND  113 (292)
Q Consensus        73 ----------~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~~~-----~~~~i~-s~-~g~~  113 (292)
                                .+|++|||||...                      +.++..++++++....     -.+||. |+ .|..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                      4799999999642                      1223334444222110     135554 43 3322


Q ss_pred             CccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceec-cccccccccCCCCCCCCCceeecCCCcceEE
Q 039623          114 VDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFA-GYFLPTLAQIGAPAPPREKVTIFGDGNAGAV  185 (292)
Q Consensus       114 ~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (292)
                      . .       ...|..+|..++.+.+.       .+++++.+.||++. +...... ..    . ....  ...+   ..
T Consensus       809 g-g-------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~-~~----~-~~~~--~~~p---lr  869 (1878)
T 2uv9_A          809 G-N-------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN-NL----V-AEGV--EKLG---VR  869 (1878)
T ss_dssp             S-C-------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH-HH----T-HHHH--HTTT---CC
T ss_pred             C-C-------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc-hh----h-HHHH--HhcC---CC
Confidence            1 1       34566699998887542       13778888888876 3322110 00    0 0000  0001   02


Q ss_pred             eeccchHHHHHHHhhcCCc---CCCceEEEc--CC-CccccHHHHHHHH
Q 039623          186 YNKEDDIATYTINSIDGPR---TLNKTLYIR--PP-GNVYSFNELVTLW  228 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~~~---~~~~~~~~~--~~-~~~~t~~e~~~~~  228 (292)
                      ....+|+|.+++.++....   ..|..+.+.  |. .....+.++...+
T Consensus       870 ~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          870 TFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             CBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence            3478999999999986542   125555552  22 2223455554443

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.93  E-value=1.4e-08  Score=76.81  Aligned_cols=99  Identities=14%  Similarity=0.163  Sum_probs=75.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|+.+++.|.+.|++|++++|++    +++.+.+......++.++.+|.+|++.+.++ ++++|+||.+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLP----EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC----HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence            46999995 9999999999999999999999972    2344444444456899999999999999887 7899999998


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .+..  .....+...+++.....+++.
T Consensus        79 ~~~d--~~n~~~~~~a~~~~~~~~ii~  103 (153)
T 1id1_A           79 SDND--ADNAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             SSCH--HHHHHHHHHHHHHTSSSCEEE
T ss_pred             cCCh--HHHHHHHHHHHHHCCCCEEEE
Confidence            8754  345556666777632455553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.93  E-value=1.3e-09  Score=91.39  Aligned_cols=78  Identities=21%  Similarity=0.247  Sum_probs=64.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hhc-CCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FKN-LGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~-~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++++||||+|.+|+++++.|.+.|++|++++|+     .++.+.+.. +.. .++.++.+|++|.+++.++++.+|+|||
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~-----~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn  194 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT  194 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence            579999999999999999999999999999998     555543322 211 2567888999999999999999999999


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      +++..
T Consensus       195 ~ag~g  199 (287)
T 1lu9_A          195 AGAIG  199 (287)
T ss_dssp             CCCTT
T ss_pred             CCCcc
Confidence            99854

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.90  E-value=7.6e-09  Score=88.12  Aligned_cols=99  Identities=11%  Similarity=0.112  Sum_probs=71.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECCCCCHHHHHHHHccCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      +|||+|+||+|++|..++..|.+.|  ++|++++++     ++ .....++.+.... .+.+ +.+.+++.++++++|+|
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~-----~~-~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvV   80 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV-----NA-PGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLI   80 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESS-----SH-HHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCC-----Cc-HhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEE
Confidence            3789999999999999999999988  789999887     33 1111222221111 1222 33456788899999999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhCCcceeec
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ||++|...             +..++.+++++.+.+ .+.++.
T Consensus        81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~vi  122 (326)
T 1smk_A           81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVN  122 (326)
T ss_dssp             EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEE
T ss_pred             EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence            99998654             478999999999987 554443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.89  E-value=7.8e-09  Score=89.67  Aligned_cols=90  Identities=18%  Similarity=0.168  Sum_probs=74.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||+|+|| |++|+.+++.|.+ .++|++.+|+     .++.+.+    ...+..+..|+.|.+++.++++++|+||+++
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~-----~~~~~~~----~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVN-----NENLEKV----KEFATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESC-----HHHHHHH----TTTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcC-----HHHHHHH----hccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            68999998 9999999998855 5899999998     5554433    3467888999999999999999999999999


Q ss_pred             cCCCchhHHHHHHHHHHhCCcceeec
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ++.   ....++++|.++|  .+++-
T Consensus        86 p~~---~~~~v~~~~~~~g--~~yvD  106 (365)
T 3abi_A           86 PGF---LGFKSIKAAIKSK--VDMVD  106 (365)
T ss_dssp             CGG---GHHHHHHHHHHHT--CEEEE
T ss_pred             CCc---ccchHHHHHHhcC--cceEe
Confidence            865   3568999999998  55654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.88  E-value=9.4e-09  Score=91.59  Aligned_cols=76  Identities=18%  Similarity=0.287  Sum_probs=64.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |++|+|+|| |++|+.+++.|.+. |++|++.+|+     .++.+.+...  .++..+.+|+.|.+++.++++++|+|||
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~-----~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~~~DvVIn   94 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRT-----LANAQALAKP--SGSKAISLDVTDDSALDKVLADNDVVIS   94 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESS-----HHHHHHHHGG--GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECC-----HHHHHHHHHh--cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence            468999997 99999999999998 6899999998     6666544332  3678889999999999999999999999


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      +++..
T Consensus        95 ~tp~~   99 (467)
T 2axq_A           95 LIPYT   99 (467)
T ss_dssp             CSCGG
T ss_pred             CCchh
Confidence            99865

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.87  E-value=1.8e-08  Score=74.74  Aligned_cols=95  Identities=18%  Similarity=0.233  Sum_probs=73.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++|+     +++.+.+..  ..++..+.+|..+.+.+.+. +.++|+||++
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~-----~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHH--hcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            68999996 999999999999999999999997     555433322  23778889999998887655 6789999999


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .+..  .....+.+.++..+ ..+++.
T Consensus        77 ~~~~--~~~~~~~~~~~~~~-~~~ii~  100 (140)
T 1lss_A           77 TGKE--EVNLMSSLLAKSYG-INKTIA  100 (140)
T ss_dssp             CSCH--HHHHHHHHHHHHTT-CCCEEE
T ss_pred             eCCc--hHHHHHHHHHHHcC-CCEEEE
Confidence            8754  23345667777777 667665

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.76  E-value=4.4e-08  Score=102.87  Aligned_cols=148  Identities=14%  Similarity=0.126  Sum_probs=100.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      ++++||||+|.||+.+++.|.++|++ |++++|+.... ....+.++.+.  ..++.++.+|++|.+++.++++      
T Consensus      1885 k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g 1963 (2512)
T 2vz8_A         1885 KSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRT-GYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLG 1963 (2512)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCS-HHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcch-HHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            46999999999999999999999987 77778874321 11122233333  3347788999999998887764      


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHHHH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYADK  131 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K  131 (292)
                      .+|++||+||...                   +.++.++.+++...- ...+||. |+.......     .....|..+|
T Consensus      1964 ~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~-----~g~~~Y~aaK 2038 (2512)
T 2vz8_A         1964 PVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN-----AGQANYGFAN 2038 (2512)
T ss_dssp             CEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC-----TTCHHHHHHH
T ss_pred             CCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC-----CCcHHHHHHH
Confidence            5899999999643                   567777777776542 1356665 442211111     1123455599


Q ss_pred             HHHHHHHH---HcCccEEEEecceecc
Q 039623          132 IKIRRAIE---AEGIQYTYVSCNCFAG  155 (292)
Q Consensus       132 ~~~e~~~~---~~~~~~~~ir~~~~~~  155 (292)
                      ..++.+.+   ..|++...+-.+.+++
T Consensus      2039 aal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2039 SAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             HHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             HHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence            99988887   4688887777666654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.73  E-value=1.1e-07  Score=72.00  Aligned_cols=95  Identities=16%  Similarity=0.248  Sum_probs=72.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|+.+++.|.+.|++|++++|+     +++.+.+..  ..++..+.+|..+.+.+.++ +.++|+||.+
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~-----~~~~~~~~~--~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKN-----EYAFHRLNS--EFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----GGGGGGSCT--TCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHh--cCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            57999995 999999999999999999999998     555533221  34678888999998877765 6789999999


Q ss_pred             CcCCCchhHHHHHHHHHH-hCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKE-AGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~-~~~~~~~i~  107 (292)
                      .+..  .....+++.++. .+ ..+++.
T Consensus        92 ~~~~--~~~~~~~~~~~~~~~-~~~iv~  116 (155)
T 2g1u_A           92 TNDD--STNFFISMNARYMFN-VENVIA  116 (155)
T ss_dssp             SSCH--HHHHHHHHHHHHTSC-CSEEEE
T ss_pred             eCCc--HHHHHHHHHHHHHCC-CCeEEE
Confidence            8854  344556666666 45 555654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.69  E-value=3e-08  Score=77.32  Aligned_cols=94  Identities=17%  Similarity=0.264  Sum_probs=73.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH--HccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA--IKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~--~~~~d~vi   78 (292)
                      ++|+|+| .|.+|+.+++.|.+. |++|++++|+     +++.+.   +...++..+.+|.++.+.+.++  +.++|+||
T Consensus        40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~-----~~~~~~---~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIR-----EEAAQQ---HRSEGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESC-----HHHHHH---HHHTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECC-----HHHHHH---HHHCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            4799999 699999999999999 9999999998     666543   3345888999999999888877  77899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .+.+..  .....++..+++.+...+++
T Consensus       111 ~~~~~~--~~~~~~~~~~~~~~~~~~ii  136 (183)
T 3c85_A          111 LAMPHH--QGNQTALEQLQRRNYKGQIA  136 (183)
T ss_dssp             ECCSSH--HHHHHHHHHHHHTTCCSEEE
T ss_pred             EeCCCh--HHHHHHHHHHHHHCCCCEEE
Confidence            987753  44555666777766233444

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.68  E-value=1.2e-07  Score=76.05  Aligned_cols=95  Identities=21%  Similarity=0.240  Sum_probs=74.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++     +++.+.+..  ..++.++.+|.+|++.+.++ ++++|+||.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~-----~~~~~~l~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKD-----RELCEEFAK--KLKATIIHGDGSHKEILRDAEVSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHHH--HSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHH--HcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence            68999995 999999999999999999999998     666644332  34789999999999999887 6789999987


Q ss_pred             CcCCCchhHHHHHHHHHH-hCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKE-AGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~-~~~~~~~i~  107 (292)
                      .+..  .....+...+++ .+ ..+++.
T Consensus        73 ~~~d--~~n~~~~~~a~~~~~-~~~iia   97 (218)
T 3l4b_C           73 TPRD--EVNLFIAQLVMKDFG-VKRVVS   97 (218)
T ss_dssp             CSCH--HHHHHHHHHHHHTSC-CCEEEE
T ss_pred             cCCc--HHHHHHHHHHHHHcC-CCeEEE
Confidence            7754  334445555665 45 566664

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.61  E-value=4.7e-07  Score=67.22  Aligned_cols=94  Identities=18%  Similarity=0.321  Sum_probs=71.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|.| .|.+|+.+++.|.+.|++|++++++     +++.+.   +...++.++.+|.++++.+.++ +.++|+||.+
T Consensus         8 ~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~-----~~~~~~---~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            8 NHALLVG-YGRVGSLLGEKLLASDIPLVVIETS-----RTRVDE---LRERGVRAVLGNAANEEIMQLAHLECAKWLILT   78 (140)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESC-----HHHHHH---HHHTTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECC-----HHHHHH---HHHcCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence            4799999 5999999999999999999999998     666543   3356899999999999988775 5689999988


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceee
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .+...  ....++..+++.+...+++
T Consensus        79 ~~~~~--~n~~~~~~a~~~~~~~~ii  102 (140)
T 3fwz_A           79 IPNGY--EAGEIVASARAKNPDIEII  102 (140)
T ss_dssp             CSCHH--HHHHHHHHHHHHCSSSEEE
T ss_pred             CCChH--HHHHHHHHHHHHCCCCeEE
Confidence            77542  2333455566553133444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.57  E-value=8.3e-07  Score=93.75  Aligned_cols=77  Identities=9%  Similarity=0.125  Sum_probs=60.5

Q ss_pred             ceEEEEccCCc-chHHHHHHHHhCCCCEEEEecCCCCCCCcc-----hhhH-hhhhc--CCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGY-IGKKILEASVKAGHPTFALVRESTASDPVK-----GKLI-EIFKN--LGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~-~~~~~--~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |+++||||++. ||+.+++.|+++|++|++.+|+.     ++     .+.+ +.+..  ..+..+.+|++|.+++.++++
T Consensus      2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~-----~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSRL-----DDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCC-----SHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCCh-----hhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            56999999999 99999999999999999999983     33     2222 22222  236788999999998887753


Q ss_pred             -----------cCCEEEEcCcC
Q 039623           73 -----------QVDVVISTVSR   83 (292)
Q Consensus        73 -----------~~d~vi~~a~~   83 (292)
                                 ..|++|||||.
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHhhhhhhcCCCCEEEECCCc
Confidence                       37999999997

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.55  E-value=4.4e-08  Score=83.57  Aligned_cols=104  Identities=13%  Similarity=0.088  Sum_probs=68.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-------CEEEEecCCCCCCCcchh-hHhhhhcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-------PTFALVRESTASDPVKGK-LIEIFKNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~~~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||+||||+|++|++++..|+..|+       +|++++++.... .++.+ ...++.+....+ ..|+...+++.+++++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~-~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKA-QKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHH-HHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccc-cccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence            6899999999999999999999885       688887751000 01111 112222211111 2355544557788999


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC-Ccceeec
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG-NVKRFLP  107 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~-~~~~~i~  107 (292)
                      +|+|||+||...             +..++.+++++.+++ .-.+++.
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~  131 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLV  131 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            999999999765             567889999999883 2225554

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.53  E-value=1.9e-07  Score=79.06  Aligned_cols=95  Identities=19%  Similarity=0.131  Sum_probs=64.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEec--CCCCCCCcchhh----Hhhhh---cCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVR--ESTASDPVKGKL----IEIFK---NLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~----~~~~~---~~~v~~v~~D~~d~~~~~~~   70 (292)
                      |||+||||+|++|++++..|+..|.  ++..+++  +     .++.+.    +....   ...+++...+    +++.++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a   71 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS-----INKLEGLREDIYDALAGTRSDANIYVES----DENLRI   71 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG-----HHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCc-----hhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH
Confidence            6899999999999999999998884  4777777  4     332221    11111   0122332211    224567


Q ss_pred             HccCCEEEEcCcCCC-------------chhHHHHHHHHHHhCCcceee
Q 039623           71 IKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        71 ~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      ++++|+|||+||...             +..++.+++++++++ -..++
T Consensus        72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vl  119 (313)
T 1hye_A           72 IDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF  119 (313)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_pred             hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEE
Confidence            899999999999764             678999999999987 33444

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.45  E-value=6.6e-07  Score=75.36  Aligned_cols=93  Identities=13%  Similarity=0.049  Sum_probs=65.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEec--CCCCCCCcchhh-Hhhhh-----cCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVR--ESTASDPVKGKL-IEIFK-----NLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~-~~~~~-----~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      |||+|+||+|++|++++..|+..|+  ++..+++  +     .++.+. ..++.     ..++++...   +    .+++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~   68 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK-----EDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDT   68 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG-----HHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCC-----hhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHh
Confidence            6899999999999999999998875  5777777  4     333211 11111     123444432   2    3458


Q ss_pred             ccCCEEEEcCcCCC-------------chhHHHHHHHHHHhCCcceeec
Q 039623           72 KQVDVVISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        72 ~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +++|+|||+++...             +..++.+++++++.+ .+.++.
T Consensus        69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~vi  116 (303)
T 1o6z_A           69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISL  116 (303)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEE
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEE
Confidence            89999999999765             468899999999987 555443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.43  E-value=5.7e-07  Score=71.94  Aligned_cols=73  Identities=19%  Similarity=0.337  Sum_probs=54.0

Q ss_pred             ceEEEEcc----------------CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH
Q 039623            2 AATLIIGG----------------TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~   65 (292)
                      |+||||||                ||.+|.+++++|.++|++|+.++|+.+.. +        ....++..+.  +.+.+
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~--------~~~~~~~~~~--v~s~~   72 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P--------EPHPNLSIRE--ITNTK   72 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C--------CCCTTEEEEE--CCSHH
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c--------cCCCCeEEEE--HhHHH
Confidence            68999999                99999999999999999999999974321 0        0023555554  44544


Q ss_pred             HH----HHHHccCCEEEEcCcCCC
Q 039623           66 SL----IKAIKQVDVVISTVSRGQ   85 (292)
Q Consensus        66 ~~----~~~~~~~d~vi~~a~~~~   85 (292)
                      ++    .+.+.++|++||+|+...
T Consensus        73 em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           73 DLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHhcCCCCEEEEcCcccc
Confidence            43    334457999999999766

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.42  E-value=7.1e-07  Score=72.30  Aligned_cols=91  Identities=20%  Similarity=0.226  Sum_probs=72.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|+.+++.|.+.|+ |++++|+     +++.+.   +. .++.++.+|.+|++.+.++ ++++|.||.+
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~-----~~~~~~---~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDE-----NVRKKV---LR-SGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCG-----GGHHHH---HH-TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECC-----HHHHHH---Hh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            57999996 9999999999999999 9999988     555533   33 6799999999999999877 7899999988


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcc-eee
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVK-RFL  106 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~-~~i  106 (292)
                      .+..  .....+...+++.+ .+ +++
T Consensus        79 ~~~d--~~n~~~~~~a~~~~-~~~~ii  102 (234)
T 2aef_A           79 LESD--SETIHCILGIRKID-ESVRII  102 (234)
T ss_dssp             CSCH--HHHHHHHHHHHHHC-SSSEEE
T ss_pred             CCCc--HHHHHHHHHHHHHC-CCCeEE
Confidence            7654  34455667777777 44 444

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.35  E-value=1.6e-06  Score=69.11  Aligned_cols=71  Identities=17%  Similarity=0.190  Sum_probs=53.9

Q ss_pred             ceEEEEcc----------------CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH
Q 039623            2 AATLIIGG----------------TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~   65 (292)
                      ++||||||                ||.+|.++++.|.++|++|++++|+....          . ..+++  ..|+.+.+
T Consensus         9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~----------~-~~g~~--~~dv~~~~   75 (226)
T 1u7z_A            9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------T-PPFVK--RVDVMTAL   75 (226)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------C-CTTEE--EEECCSHH
T ss_pred             CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc----------c-CCCCe--EEccCcHH
Confidence            57999999                79999999999999999999998864211          0 12333  45777766


Q ss_pred             HHHHH----HccCCEEEEcCcCCC
Q 039623           66 SLIKA----IKQVDVVISTVSRGQ   85 (292)
Q Consensus        66 ~~~~~----~~~~d~vi~~a~~~~   85 (292)
                      ++.+.    +.++|++||+||...
T Consensus        76 ~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           76 EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHhcCCCCEEEECCcccC
Confidence            55444    347999999999765

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.27  E-value=8.5e-06  Score=71.46  Aligned_cols=88  Identities=22%  Similarity=0.339  Sum_probs=73.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|+| .|.+|+.+++.|.+.|++|++++++     +++.+.   +...++.++.||.++++.+.++ ++++|+||.+
T Consensus         5 ~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d-----~~~v~~---~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            5 MRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHD-----PDHIET---LRKFGMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECC-----HHHHHH---HHHTTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC-----HHHHHH---HHhCCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            5799999 5999999999999999999999998     666643   3456899999999999999887 7789999988


Q ss_pred             CcCCCchhHHHHHHHHHHhC
Q 039623           81 VSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+..  .....++..+++.+
T Consensus        76 ~~~~--~~n~~i~~~ar~~~   93 (413)
T 3l9w_A           76 IDDP--QTNLQLTEMVKEHF   93 (413)
T ss_dssp             CSSH--HHHHHHHHHHHHHC
T ss_pred             CCCh--HHHHHHHHHHHHhC
Confidence            7753  55667777788776

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.22  E-value=5.1e-06  Score=70.20  Aligned_cols=90  Identities=16%  Similarity=0.150  Sum_probs=63.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC---HHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD---HESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~~~d~   76 (292)
                      |||+|+||+|++|..++..|.+.|  .+|.+++++.      ......++.+....   .++..   .+++.++++++|+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~------~~~~a~dL~~~~~~---~~l~~~~~t~d~~~a~~~aDv   71 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH------TPGVAADLSHIETR---ATVKGYLGPEQLPDCLKGCDV   71 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS------HHHHHHHHTTSSSS---CEEEEEESGGGHHHHHTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc------cHHHHHHHhccCcC---ceEEEecCCCCHHHHhCCCCE
Confidence            689999999999999999999888  7899999973      11111222221110   11211   1346778999999


Q ss_pred             EEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           77 VISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        77 vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ||+++|...             +...+.+++.+.+..
T Consensus        72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~  108 (314)
T 1mld_A           72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC  108 (314)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            999998765             356777888888776

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.20  E-value=5.2e-07  Score=71.90  Aligned_cols=75  Identities=17%  Similarity=0.163  Sum_probs=52.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+|+||+|.+|+.+++.|.+.|++|++++|+     +++.+.+.......+.  ..|+. .+++.++++++|+||+++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR-----EEKAEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS-----HHHHHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence            589999999999999999999999999999998     5555433221110000  01222 123556677899999998


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      ...
T Consensus        73 ~~~   75 (212)
T 1jay_A           73 PWE   75 (212)
T ss_dssp             CHH
T ss_pred             Chh
Confidence            743

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.18  E-value=7.6e-06  Score=70.16  Aligned_cols=82  Identities=17%  Similarity=0.174  Sum_probs=62.7

Q ss_pred             ceEEEEccCCcchHHHHHHHH-hCCCCEEEEecCCCCCCCcch--------hhHhh---hhcCCcEEEECCCCCHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASV-KAGHPTFALVRESTASDPVKG--------KLIEI---FKNLGVNVLYGDLQDHESLIK   69 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~--------~~~~~---~~~~~v~~v~~D~~d~~~~~~   69 (292)
                      |++|||||+..+|.+.+..|. +.|.+|.++.|..... ..+.        ..+..   -..-....+.+|++|++++.+
T Consensus        51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~-~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~  129 (401)
T 4ggo_A           51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGS-ETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ  129 (401)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCC-SSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCccc-ccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence            679999999999999999887 6799999999875543 2211        11111   124567899999999988887


Q ss_pred             HHc-------cCCEEEEcCcCC
Q 039623           70 AIK-------QVDVVISTVSRG   84 (292)
Q Consensus        70 ~~~-------~~d~vi~~a~~~   84 (292)
                      +++       ++|+++|+++..
T Consensus       130 vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          130 VIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHhcCCCCEEEEecccc
Confidence            775       589999999965

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.11  E-value=4.8e-06  Score=72.10  Aligned_cols=74  Identities=18%  Similarity=0.270  Sum_probs=58.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+|+ |.+|+.+++.|...|++|++++|+     +++.+.+....  +.. +.+|..+.+++.++++++|+||+++
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~-----~~~~~~~~~~~--g~~-~~~~~~~~~~l~~~~~~~DvVi~~~  237 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVN-----HKRLQYLDDVF--GGR-VITLTATEANIKKSVQHADLLIGAV  237 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHT--TTS-EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHhc--Cce-EEEecCCHHHHHHHHhCCCEEEECC
Confidence            57999998 999999999999999999999998     66654443322  222 4566777888888999999999999


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       238 g~~  240 (369)
T 2eez_A          238 LVP  240 (369)
T ss_dssp             C--
T ss_pred             CCC
Confidence            864

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.05  E-value=2.7e-06  Score=72.31  Aligned_cols=95  Identities=17%  Similarity=0.082  Sum_probs=62.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--C-----EEEEecCCCCCCCcch-hhHhhhhcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--P-----TFALVRESTASDPVKG-KLIEIFKNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~~~~~~-~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      +||+||||+|++|++++..|...|.  +     +..++++..   .++. ....++.+....+. .++...+...+.+++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~---~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM---MGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKD   79 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc---cccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCC
Confidence            5899999999999999999998874  5     888888621   0121 11122222111111 122212234567889


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+||++||...             ....+.+++++.+++
T Consensus        80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~  119 (333)
T 5mdh_A           80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA  119 (333)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998754             567889999999987

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.05  E-value=4e-06  Score=65.91  Aligned_cols=72  Identities=22%  Similarity=0.386  Sum_probs=51.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH---HHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE---SLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~---~~~~~~~--~~d~   76 (292)
                      ++|+|+||+|.+|..+++.+...|++|++++|+     +++.+.+..   .+... ..|..+.+   .+.+...  ++|+
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~~---~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~  110 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREMLSR---LGVEY-VGDSRSVDFADEILELTDGYGVDV  110 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHT---TCCSE-EEETTCSTHHHHHHHHTTTCCEEE
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---cCCCE-EeeCCcHHHHHHHHHHhCCCCCeE
Confidence            479999999999999999999999999999997     555544333   23332 23555543   3333332  5899


Q ss_pred             EEEcCc
Q 039623           77 VISTVS   82 (292)
Q Consensus        77 vi~~a~   82 (292)
                      +|+++|
T Consensus       111 vi~~~g  116 (198)
T 1pqw_A          111 VLNSLA  116 (198)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999997

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.02  E-value=1.2e-05  Score=71.56  Aligned_cols=96  Identities=13%  Similarity=0.191  Sum_probs=71.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |+|+|.| .|.+|+++++.|.++||+|++++++     +++.+.+..  ..++..+.||.++++.+.++ ++++|.+|-+
T Consensus         4 M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d-----~~~~~~~~~--~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            4 MKIIILG-AGQVGGTLAENLVGENNDITIVDKD-----GDRLRELQD--KYDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             EEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESC-----HHHHHHHHH--HSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHHH--hcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            8899999 5999999999999999999999998     666654432  34789999999999999887 5689999865


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .+..  .....++..|++....++.+.
T Consensus        76 t~~D--e~Nl~~~~~Ak~~~~~~~~ia  100 (461)
T 4g65_A           76 TNTD--ETNMAACQVAFTLFNTPNRIA  100 (461)
T ss_dssp             CSCH--HHHHHHHHHHHHHHCCSSEEE
T ss_pred             cCCh--HHHHHHHHHHHHhcCCcccee
Confidence            5533  233334445555422555553

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.00  E-value=1.2e-05  Score=68.89  Aligned_cols=94  Identities=15%  Similarity=0.102  Sum_probs=57.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-----C-CEEEEecCCCCCCCcchhhH-hhhhc-CCcEEEECCCCCHHHHHHHHc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-----H-PTFALVRESTASDPVKGKLI-EIFKN-LGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~-~~~~~-~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |+||+|.||||++|+.+++.|.+++     + +++++.+.++.  ..+.... ..+.. ..+.+.  |+ +++    .+.
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~a--gk~~~~~~~~l~~~~~~~~~--~~-~~~----~~~   79 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSA--GSTLGEHHPHLTPLAHRVVE--PT-EAA----VLG   79 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCT--TSBGGGTCTTCGGGTTCBCE--EC-CHH----HHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcC--CCchhhhcccccccceeeec--cC-CHH----Hhc
Confidence            4689999999999999999999887     3 67777654321  1111110 01111 122222  22 333    255


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      ++|+||.|.|...   +..+++.+ +.| ++.+..|
T Consensus        80 ~~DvVf~alg~~~---s~~~~~~~-~~G-~~vIDlS  110 (352)
T 2nqt_A           80 GHDAVFLALPHGH---SAVLAQQL-SPE-TLIIDCG  110 (352)
T ss_dssp             TCSEEEECCTTSC---CHHHHHHS-CTT-SEEEECS
T ss_pred             CCCEEEECCCCcc---hHHHHHHH-hCC-CEEEEEC
Confidence            8999999998653   56677777 777 6544434

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.93  E-value=1.6e-05  Score=67.85  Aligned_cols=91  Identities=20%  Similarity=0.196  Sum_probs=72.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|.|+ |.+|+.+++.|.+.|+ |.+++++     +++.+    +...++.++.+|.+|++.+.++ ++++|.|+-+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~-----~~~~~----~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~  184 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDE-----NVRKK----VLRSGANFVHGDPTRVSDLEKANVRGARAVIVD  184 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCG-----GGHHH----HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCC-----hhhhh----HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence            36999995 9999999999999999 9999888     66654    3357899999999999999887 7789999987


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcc-eee
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVK-RFL  106 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~-~~i  106 (292)
                      .+..  .....++..+++.+ .+ +++
T Consensus       185 ~~~d--~~n~~~~~~ar~~~-~~~~ii  208 (336)
T 1lnq_A          185 LESD--SETIHCILGIRKID-ESVRII  208 (336)
T ss_dssp             CSSH--HHHHHHHHHHHTTC-TTSEEE
T ss_pred             CCcc--HHHHHHHHHHHHHC-CCCeEE
Confidence            7643  45555666677766 43 444

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.88  E-value=2.7e-05  Score=62.03  Aligned_cols=68  Identities=18%  Similarity=0.217  Sum_probs=51.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|+|+| +|.+|+.+++.|.+.|++|++.+|+     +++.+.   +...++...        ++.++++++|+||.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~-----~~~~~~---~~~~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRN-----PKRTAR---LFPSAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS-----HHHHHH---HSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHH---HHHcCCcee--------cHHHHHhCCCEEEEC
Confidence            47899999 8999999999999999999999998     555433   223355442        244567899999999


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .....
T Consensus        91 v~~~~   95 (215)
T 2vns_A           91 VFREH   95 (215)
T ss_dssp             SCGGG
T ss_pred             CChHH
Confidence            88644

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.85  E-value=9.6e-06  Score=69.12  Aligned_cols=92  Identities=14%  Similarity=0.104  Sum_probs=60.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhh-HhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKL-IEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      +||.|+|++|++|+.++..|+..|  .+|.+++++     .+|.+- ..++.+...  -..++.-..++.++++++|+||
T Consensus         9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-----~~k~~g~a~DL~~~~~--~~~~i~~t~d~~~al~dADvVv   81 (343)
T 3fi9_A            9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-----AVGLEGVAEEIRHCGF--EGLNLTFTSDIKEALTDAKYIV   81 (343)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-----HHHHHHHHHHHHHHCC--TTCCCEEESCHHHHHTTEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-----chhHHHHHHhhhhCcC--CCCceEEcCCHHHHhCCCCEEE
Confidence            689999999999999999999988  589999987     554432 111211100  0011111123557788999999


Q ss_pred             EcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           79 STVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      .++|...             ....+.+.+.+.+..
T Consensus        82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~  116 (343)
T 3fi9_A           82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC  116 (343)
T ss_dssp             ECCC-------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9998764             455677777777776

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.85  E-value=1.9e-05  Score=67.71  Aligned_cols=73  Identities=19%  Similarity=0.227  Sum_probs=52.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHH----HHHHc-cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESL----IKAIK-QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~----~~~~~-~~d~   76 (292)
                      ++|||+||+|.+|..+++.+...|++|++++|+     +++.+.++.+   +...+ .|+.+.+++    .++.. ++|+
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~-----~~~~~~~~~~---g~~~~-~d~~~~~~~~~~~~~~~~~~~D~  241 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG-----EGKEELFRSI---GGEVF-IDFTKEKDIVGAVLKATDGGAHG  241 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS-----TTHHHHHHHT---TCCEE-EETTTCSCHHHHHHHHHTSCEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC-----HHHHHHHHHc---CCceE-EecCccHhHHHHHHHHhCCCCCE
Confidence            479999999999999999999999999999998     5555444432   33322 365532223    33322 5899


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      ||+++|.
T Consensus       242 vi~~~g~  248 (347)
T 2hcy_A          242 VINVSVS  248 (347)
T ss_dssp             EEECSSC
T ss_pred             EEECCCc
Confidence            9999984

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.83  E-value=4.9e-05  Score=64.86  Aligned_cols=90  Identities=14%  Similarity=0.174  Sum_probs=56.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |||+|.||||++|+.+++.|.+++|   ++.++....+   ..+.-  . +  .+.+....|. |++    .++++|+||
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~---~g~~~--~-~--~g~~i~~~~~-~~~----~~~~~DvV~   73 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES---AGQRM--G-F--AESSLRVGDV-DSF----DFSSVGLAF   73 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT---TTCEE--E-E--TTEEEECEEG-GGC----CGGGCSEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCC---CCCcc--c-c--CCcceEEecC-CHH----HhcCCCEEE
Confidence            5899999999999999999997654   4555543211   11110  0 1  1222222222 222    256899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      .+.|..   .+..+++.+.+.| ++.+..|
T Consensus        74 ~a~g~~---~s~~~a~~~~~aG-~kvId~S   99 (340)
T 2hjs_A           74 FAAAAE---VSRAHAERARAAG-CSVIDLS   99 (340)
T ss_dssp             ECSCHH---HHHHHHHHHHHTT-CEEEETT
T ss_pred             EcCCcH---HHHHHHHHHHHCC-CEEEEeC
Confidence            998843   4677888888888 7755544

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.81  E-value=1.8e-05  Score=67.48  Aligned_cols=73  Identities=16%  Similarity=0.190  Sum_probs=52.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-H---HHHHHHHc-cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-H---ESLIKAIK-QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-~---~~~~~~~~-~~d~   76 (292)
                      ++|+|+||+|.+|..+++.+...|++|++++|+     +++.+.++.+   +... ..|..+ .   +.+.++.. ++|+
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~~~~~~~~~~~d~  217 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLKQI---GFDA-AFNYKTVNSLEEALKKASPDGYDC  217 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTSCSCHHHHHHHHCTTCEEE
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCcE-EEecCCHHHHHHHHHHHhCCCCeE
Confidence            479999999999999999999999999999997     6666554333   3322 235555 2   22222222 5899


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      +|+++|.
T Consensus       218 vi~~~g~  224 (333)
T 1v3u_A          218 YFDNVGG  224 (333)
T ss_dssp             EEESSCH
T ss_pred             EEECCCh
Confidence            9999984

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.80  E-value=7.8e-05  Score=62.75  Aligned_cols=79  Identities=16%  Similarity=0.138  Sum_probs=57.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHh-hhh-cCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIE-IFK-NLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++++|+|+ |.+|+.++..|.+.|. +|+++.|+.+.  .++.+.+. .+. ..+..+...++.+.+++.+.+.++|+||
T Consensus       155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~--~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII  231 (315)
T 3tnl_A          155 KKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDF--YANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT  231 (315)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTT--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCch--HHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence            57999996 8899999999999997 89999998321  23333222 111 1234455567777788888889999999


Q ss_pred             EcCcC
Q 039623           79 STVSR   83 (292)
Q Consensus        79 ~~a~~   83 (292)
                      ++.+.
T Consensus       232 NaTp~  236 (315)
T 3tnl_A          232 NATGV  236 (315)
T ss_dssp             ECSST
T ss_pred             ECccC
Confidence            98764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.77  E-value=0.00011  Score=59.50  Aligned_cols=97  Identities=9%  Similarity=0.156  Sum_probs=63.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-----cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-----QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-----~~d   75 (292)
                      |||+|.|++|.+|+.+++.+.+. ++++.+......     ..   +.+...+.+ +..|++.++...+.+.     +.+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~-----dl---~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~   71 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD-----PL---SLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIH   71 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC-----CT---HHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC-----CH---HHHhccCCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence            58999999999999999999876 899887765421     11   222222344 5677777766555442     688


Q ss_pred             EEEEcCcCCCchhHHHHHHHHHHh-CCcceeeccC
Q 039623           76 VVISTVSRGQIPEQAKIIAAVKEA-GNVKRFLPSE  109 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~~~-~~~~~~i~s~  109 (292)
                      +|+-+.|... .....+.++|++. + ++.++.+.
T Consensus        72 ~VigTTG~~~-e~~~~l~~aa~~~~~-~~vv~a~N  104 (245)
T 1p9l_A           72 AVVGTTGFTA-ERFQQVESWLVAKPN-TSVLIAPN  104 (245)
T ss_dssp             EEECCCCCCH-HHHHHHHHHHHTSTT-CEEEECSC
T ss_pred             EEEcCCCCCH-HHHHHHHHHHHhCCC-CCEEEECC
Confidence            8888877543 3345555666655 4 66665433

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.76  E-value=0.00012  Score=62.23  Aligned_cols=99  Identities=21%  Similarity=0.205  Sum_probs=59.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCC-CCCcchhhH-hhhhcC-CcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTA-SDPVKGKLI-EIFKNL-GVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-~~~~~~~~~-~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+||.|+||||++|+.+++.|.++ .+++..+.++++. +...+...+ ..+... ...+...  .+.+   ++.+++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence            789999999999999999999986 4788877655311 101122111 112111 2333222  0222   22368999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      ||.|.+.   ..+..++..+.+.| ++.+-.|
T Consensus        79 vf~a~p~---~~s~~~~~~~~~~g-~~vIDlS  106 (337)
T 3dr3_A           79 VFLATAH---EVSHDLAPQFLEAG-CVVFDLS  106 (337)
T ss_dssp             EEECSCH---HHHHHHHHHHHHTT-CEEEECS
T ss_pred             EEECCCh---HHHHHHHHHHHHCC-CEEEEcC
Confidence            9998874   34566777777778 6655444

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.76  E-value=6.1e-05  Score=63.14  Aligned_cols=93  Identities=19%  Similarity=0.149  Sum_probs=67.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----------hcCCcEEEECCCCCHHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----------KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      |+||.++| .|.+|..+++.|+++||+|++.+|+     +++.+.+...          .-.+.+++..-+.|.+.+.+.
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~-----~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V   76 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV-----QSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL   76 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCC-----HHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHH
Confidence            88999999 8999999999999999999999998     6666544321          012455666666777777666


Q ss_pred             Hcc----------CCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           71 IKQ----------VDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~~~----------~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +.+          -++||.+.... ...++.+.+.++++|
T Consensus        77 ~~~~~g~~~~~~~g~iiId~sT~~-p~~~~~~a~~~~~~G  115 (300)
T 3obb_A           77 YLDDDGLLAHIAPGTLVLECSTIA-PTSARKIHAAARERG  115 (300)
T ss_dssp             HHSSSSSTTSCCC-CEEEECSCCC-HHHHHHHHHHHHTTT
T ss_pred             HhchhhhhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcC
Confidence            532          14556655544 477788888888777

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.75  E-value=7.6e-06  Score=60.87  Aligned_cols=71  Identities=17%  Similarity=0.154  Sum_probs=52.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| +|.+|+.+++.|.+.|++|++.+|+     +++.+.+....  +.....  ..+   +.+++.++|+||.+.
T Consensus        22 ~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~-----~~~~~~~a~~~--~~~~~~--~~~---~~~~~~~~Divi~at   88 (144)
T 3oj0_A           22 NKILLVG-NGMLASEIAPYFSYPQYKVTVAGRN-----IDHVRAFAEKY--EYEYVL--IND---IDSLIKNNDVIITAT   88 (144)
T ss_dssp             CEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESC-----HHHHHHHHHHH--TCEEEE--CSC---HHHHHHTCSEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHHh--CCceEe--ecC---HHHHhcCCCEEEEeC
Confidence            5899999 5999999999999999889999998     66665443322  233322  223   456678999999998


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus        89 ~~~~   92 (144)
T 3oj0_A           89 SSKT   92 (144)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            8764

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.74  E-value=3.2e-05  Score=64.52  Aligned_cols=68  Identities=22%  Similarity=0.308  Sum_probs=51.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|+| .|.+|+.+++.|.+.||+|++.+|+     +++.+.+..   .++..       .++..++++++|+||.+
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~~---~g~~~-------~~~~~~~~~~advvi~~   64 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRN-----PAKCAPLVA---LGARQ-------ASSPAEVCAACDITIAM   64 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSS-----GGGGHHHHH---HTCEE-------CSCHHHHHHHCSEEEEC
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHH---CCCee-------cCCHHHHHHcCCEEEEE
Confidence            89999999 7999999999999999999999998     666654433   23332       11244566788999988


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      .+..
T Consensus        65 v~~~   68 (287)
T 3pdu_A           65 LADP   68 (287)
T ss_dssp             CSSH
T ss_pred             cCCH
Confidence            7753

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.74  E-value=3.7e-05  Score=63.30  Aligned_cols=89  Identities=15%  Similarity=0.175  Sum_probs=51.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC-CCCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA-GHPTFAL-VRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+||+|+||+|.+|+.+++.+.+. ++++.+. +|+.+.......   ..+.  +...   ++.-.+++.++++++|+||
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~---gel~--g~~~---gv~v~~dl~~ll~~~DVVI   78 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDA---GAFL--GKQT---GVALTDDIERVCAEADYLI   78 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBT---TTTT--TCCC---SCBCBCCHHHHHHHCSEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccH---HHHh--CCCC---CceecCCHHHHhcCCCEEE
Confidence            579999999999999999999876 5777764 665322100011   1110  1100   1111123445556788888


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+..+   ..+...++.|.++|
T Consensus        79 DfT~p---~a~~~~~~~al~~G   97 (272)
T 4f3y_A           79 DFTLP---EGTLVHLDAALRHD   97 (272)
T ss_dssp             ECSCH---HHHHHHHHHHHHHT
T ss_pred             EcCCH---HHHHHHHHHHHHcC
Confidence            87642   34455556666666

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.74  E-value=0.00014  Score=59.29  Aligned_cols=100  Identities=18%  Similarity=0.150  Sum_probs=67.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC--------------CCcchhhHhh-hh--cCC--cEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS--------------DPVKGKLIEI-FK--NLG--VNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~-~~--~~~--v~~v~~D~   61 (292)
                      ++|+|+| .|.+|+.+++.|...|. ++++++++.-..              -..|.+.+.. +.  ++.  ++.+..++
T Consensus        32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            4799999 58899999999999996 788888874110              0034433322 11  233  45556666


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      . .+.+.++++++|+||.+...  ...-..+.++|++.+ ++.+.
T Consensus       111 ~-~~~~~~~~~~~DvVi~~~d~--~~~~~~l~~~~~~~~-~p~i~  151 (249)
T 1jw9_B          111 D-DAELAALIAEHDLVLDCTDN--VAVRNQLNAGCFAAK-VPLVS  151 (249)
T ss_dssp             C-HHHHHHHHHTSSEEEECCSS--HHHHHHHHHHHHHHT-CCEEE
T ss_pred             C-HhHHHHHHhCCCEEEEeCCC--HHHHHHHHHHHHHcC-CCEEE
Confidence            4 45677788999999998754  345566777888887 55444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.73  E-value=0.0001  Score=63.55  Aligned_cols=75  Identities=20%  Similarity=0.325  Sum_probs=57.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+|+ |-+|+.+++.|...|.+|++++|+     +++.+.+..+....+..+.   .+.+++.+.+.++|+||+++
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~-----~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~DvVI~~~  238 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVELLY---SNSAEIETAVAEADLLIGAV  238 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEEEE---CCHHHHHHHHHTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhhCceeEeee---CCHHHHHHHHcCCCEEEECC
Confidence            47999998 999999999999999999999998     7777665544333333322   24566777788999999999


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus       239 ~~~~  242 (361)
T 1pjc_A          239 LVPG  242 (361)
T ss_dssp             CCTT
T ss_pred             CcCC
Confidence            7643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.72  E-value=1.5e-05  Score=66.28  Aligned_cols=73  Identities=15%  Similarity=0.141  Sum_probs=53.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhh-h--cCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIF-K--NLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~--~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ++++|+|+ |.+|+.++..|.+.|. +|++++|+     .++.+.+... .  ..++.+...++.+   +.+.+.++|+|
T Consensus       128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~~~DiV  198 (283)
T 3jyo_A          128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVVGVDARG---IEDVIAAADGV  198 (283)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSS-----HHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHHHSSEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHhcCCEE
Confidence            57999996 8899999999999997 69999998     6666544322 1  1233444444433   55677789999


Q ss_pred             EEcCcC
Q 039623           78 ISTVSR   83 (292)
Q Consensus        78 i~~a~~   83 (292)
                      |++.+.
T Consensus       199 InaTp~  204 (283)
T 3jyo_A          199 VNATPM  204 (283)
T ss_dssp             EECSST
T ss_pred             EECCCC
Confidence            999864

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.72  E-value=1.7e-05  Score=66.11  Aligned_cols=78  Identities=19%  Similarity=0.259  Sum_probs=55.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|+|+||.+|+.+++.|.+.|++|++.+|+     +++.+.+..   .++..     .+   ..++++++|+||.+
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~---~g~~~-----~~---~~~~~~~aDvVi~a   74 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA-----PEGRDRLQG---MGIPL-----TD---GDGWIDEADVVVLA   74 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS-----HHHHHHHHH---TTCCC-----CC---SSGGGGTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHh---cCCCc-----CC---HHHHhcCCCEEEEc
Confidence            4699999988999999999999999999999998     655544433   23321     22   22456789999998


Q ss_pred             CcCCCchhHHHHHHHHH
Q 039623           81 VSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~   97 (292)
                      .....   ...+++...
T Consensus        75 v~~~~---~~~v~~~l~   88 (286)
T 3c24_A           75 LPDNI---IEKVAEDIV   88 (286)
T ss_dssp             SCHHH---HHHHHHHHG
T ss_pred             CCchH---HHHHHHHHH
Confidence            87542   455555443

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.70  E-value=4.5e-05  Score=65.52  Aligned_cols=73  Identities=14%  Similarity=0.215  Sum_probs=53.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH---HHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE---SLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~---~~~~~~~--~~d~   76 (292)
                      ++|+|+||+|.+|..+++.+...|++|++++|+     +++.+.++.+   +... ..|..+.+   .+.+...  ++|+
T Consensus       172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~-~~d~~~~~~~~~~~~~~~~~~~D~  242 (351)
T 1yb5_A          172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQN---GAHE-VFNHREVNYIDKIKKYVGEKGIDI  242 (351)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTSTTHHHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHc---CCCE-EEeCCCchHHHHHHHHcCCCCcEE
Confidence            479999999999999999999999999999998     6666544433   3332 23444433   3444443  6999


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      ||+++|.
T Consensus       243 vi~~~G~  249 (351)
T 1yb5_A          243 IIEMLAN  249 (351)
T ss_dssp             EEESCHH
T ss_pred             EEECCCh
Confidence            9999984

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.69  E-value=0.00012  Score=62.60  Aligned_cols=94  Identities=15%  Similarity=0.179  Sum_probs=57.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      +||+|.||||++|+.+++.|.+++ .++.++.+..+.  ..+.... ..+.  +..  ...+.+.+   + +.++|+||.
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~--g~~~~~~~~~~~--g~~--~~~~~~~~---~-~~~vDvV~~   74 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFA--GEPVHFVHPNLR--GRT--NLKFVPPE---K-LEPADILVL   74 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT--TSBGGGTCGGGT--TTC--CCBCBCGG---G-CCCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhh--CchhHHhCchhc--Ccc--cccccchh---H-hcCCCEEEE
Confidence            589999999999999999999876 488877664321  1111110 1111  110  01122322   2 478999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      ++|..   .+..+++.+.++| ++.+-.|+
T Consensus        75 a~g~~---~s~~~a~~~~~aG-~~VId~Sa  100 (345)
T 2ozp_A           75 ALPHG---VFAREFDRYSALA-PVLVDLSA  100 (345)
T ss_dssp             CCCTT---HHHHTHHHHHTTC-SEEEECSS
T ss_pred             cCCcH---HHHHHHHHHHHCC-CEEEEcCc
Confidence            98855   4566777777778 65333343

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.69  E-value=6.6e-05  Score=62.87  Aligned_cols=74  Identities=16%  Similarity=0.097  Sum_probs=54.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|+.++..|.+.|. +|++..|+     +++.+.+.........    +..+.+++.+.+.++|+||++
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~-----~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~  211 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRT-----VEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINT  211 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSS-----HHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEEC
Confidence            57999996 8899999999999997 89999998     6676554432221110    222345677778899999999


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .+...
T Consensus       212 t~~~~  216 (297)
T 2egg_A          212 TSVGM  216 (297)
T ss_dssp             SCTTC
T ss_pred             CCCCC
Confidence            98653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.67  E-value=7.1e-05  Score=63.75  Aligned_cols=73  Identities=18%  Similarity=0.225  Sum_probs=53.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~   76 (292)
                      ++|+|+||+|.+|..+++.+...|++|++++|+     +++.+.+..+   +.+. ..|..+.   +.+.+...  ++|+
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~i~~~~~~~~~d~  217 (333)
T 1wly_A          147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVST-----EEKAETARKL---GCHH-TINYSTQDFAEVVREITGGKGVDV  217 (333)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCE-EEECCCHHHHHHHHHHhCCCCCeE
Confidence            479999999999999999999999999999998     6666555443   2222 2244443   33444443  6899


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      +|+++|.
T Consensus       218 vi~~~g~  224 (333)
T 1wly_A          218 VYDSIGK  224 (333)
T ss_dssp             EEECSCT
T ss_pred             EEECCcH
Confidence            9999996

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.66  E-value=6.8e-05  Score=63.26  Aligned_cols=67  Identities=25%  Similarity=0.289  Sum_probs=50.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|+| .|.+|..+++.|.+.|++|++.+|+     +++.+.+.   ..++..       .+++.++++++|+||.+
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~~~l~---~~g~~~-------~~~~~~~~~~aDvvi~~   84 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRT-----LSKCDELV---EHGASV-------CESPAEVIKKCKYTIAM   84 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGGHHHH---HTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHH---HCCCeE-------cCCHHHHHHhCCEEEEE
Confidence            68999999 7999999999999999999999998     66664443   234332       12344566778988887


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      .+.
T Consensus        85 vp~   87 (310)
T 3doj_A           85 LSD   87 (310)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.66  E-value=4.8e-05  Score=65.43  Aligned_cols=74  Identities=18%  Similarity=0.236  Sum_probs=53.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~   76 (292)
                      .+|+|+||+|.+|..+++.+...|++|++++|+     +++.+.++.+   +... ..|..+.   +.+.+...  ++|+
T Consensus       164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d~  234 (354)
T 2j8z_A          164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGS-----QKKLQMAEKL---GAAA-GFNYKKEDFSEATLKFTKGAGVNL  234 (354)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCcE-EEecCChHHHHHHHHHhcCCCceE
Confidence            469999999999999999999999999999998     6666555443   3322 2344443   33444433  5899


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      +|+++|..
T Consensus       235 vi~~~G~~  242 (354)
T 2j8z_A          235 ILDCIGGS  242 (354)
T ss_dssp             EEESSCGG
T ss_pred             EEECCCch
Confidence            99999853

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.65  E-value=5.6e-05  Score=64.22  Aligned_cols=84  Identities=15%  Similarity=0.140  Sum_probs=57.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH---HHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE---SLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~---~~~~~~~--~~d~   76 (292)
                      ++|+|+||+|.+|..+++.+...|++|++++|+     +++.+.+..+   +... ..|..+.+   .+.+...  ++|+
T Consensus       142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~D~  212 (327)
T 1qor_A          142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKA---GAWQ-VINYREEDLVERLKEITGGKKVRV  212 (327)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHTTTCCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCE-EEECCCccHHHHHHHHhCCCCceE
Confidence            479999999999999999999999999999998     6666555443   3322 23444433   3333332  5899


Q ss_pred             EEEcCcCCCchhHHHHHHHHH
Q 039623           77 VISTVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~   97 (292)
                      +|+++|.   ......++.++
T Consensus       213 vi~~~g~---~~~~~~~~~l~  230 (327)
T 1qor_A          213 VYDSVGR---DTWERSLDCLQ  230 (327)
T ss_dssp             EEECSCG---GGHHHHHHTEE
T ss_pred             EEECCch---HHHHHHHHHhc
Confidence            9999992   33344444443

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.63  E-value=7.4e-05  Score=64.31  Aligned_cols=91  Identities=15%  Similarity=0.231  Sum_probs=57.0

Q ss_pred             CceEEEEccCCcchHHHHHH-HHhCCCC---EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEA-SVKAGHP---TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~-L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+||.|.||||++|+.+++. |.++++.   ++.+..++.   ..+.   ..+...  +....|..|++.    ++++|+
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~---G~~v---~~~~g~--~i~~~~~~~~~~----~~~~Dv   68 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL---GQAA---PSFGGT--TGTLQDAFDLEA----LKALDI   68 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST---TSBC---CGGGTC--CCBCEETTCHHH----HHTCSE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCC---CCCc---cccCCC--ceEEEecCChHH----hcCCCE
Confidence            88999999999999999994 5555543   444544321   1111   111112  223334445544    358999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ||.|.|.   ..+..++....+.| ++.++.
T Consensus        69 Vf~a~g~---~~s~~~a~~~~~~G-~k~vVI   95 (367)
T 1t4b_A           69 IVTCQGG---DYTNEIYPKLRESG-WQGYWI   95 (367)
T ss_dssp             EEECSCH---HHHHHHHHHHHHTT-CCCEEE
T ss_pred             EEECCCc---hhHHHHHHHHHHCC-CCEEEE
Confidence            9999883   45677777778888 765444

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.62  E-value=7.1e-05  Score=61.87  Aligned_cols=73  Identities=15%  Similarity=0.174  Sum_probs=50.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++++|+|+ |.+|+.++..|.+.|++|++.+|+     .++.+.+.............|+   +++.+  .++|+||+++
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~-----~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t  188 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINAT  188 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECC
Confidence            57999997 789999999999999999999998     6665444332111001222343   22222  5799999999


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus       189 ~~~~  192 (271)
T 1nyt_A          189 SSGI  192 (271)
T ss_dssp             SCGG
T ss_pred             CCCC
Confidence            8653

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.61  E-value=0.00027  Score=62.99  Aligned_cols=40  Identities=20%  Similarity=0.219  Sum_probs=35.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI   46 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~   46 (292)
                      ||+|.|+| .|.+|..+++.|.++|++|.+.+|+     +++.+.+
T Consensus         4 ~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l   43 (484)
T 4gwg_A            4 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDF   43 (484)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHH
T ss_pred             CCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHH
Confidence            57899999 7999999999999999999999998     5555443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.60  E-value=8.3e-05  Score=63.40  Aligned_cols=73  Identities=18%  Similarity=0.289  Sum_probs=52.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEECCCCCHH---HHHHHHc-cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYGDLQDHE---SLIKAIK-QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~D~~d~~---~~~~~~~-~~d~   76 (292)
                      ++|||+||+|.+|..+++.+...|++|++++|+     +++.+.+ +.+   +...+ .|..+.+   .+.++.. ++|+
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~d~  221 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG-----AEKCRFLVEEL---GFDGA-IDYKNEDLAAGLKRECPKGIDV  221 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTT---CCSEE-EETTTSCHHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc---CCCEE-EECCCHHHHHHHHHhcCCCceE
Confidence            479999999999999999999999999999998     6666554 332   33322 2444332   2333322 5999


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      ||+++|.
T Consensus       222 vi~~~g~  228 (336)
T 4b7c_A          222 FFDNVGG  228 (336)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.60  E-value=3.8e-05  Score=65.75  Aligned_cols=74  Identities=12%  Similarity=0.222  Sum_probs=52.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH----HHHHHHHc-cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH----ESLIKAIK-QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~----~~~~~~~~-~~d~   76 (292)
                      ++|||+||+|.+|..+++.+...|++|++++|+     +++.+.+..  ..+...+ .|..+.    +.+.++.. ++|+
T Consensus       157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~--~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d~  228 (345)
T 2j3h_A          157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS-----KEKVDLLKT--KFGFDDA-FNYKEESDLTAALKRCFPNGIDI  228 (345)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHH--TSCCSEE-EETTSCSCSHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HcCCceE-EecCCHHHHHHHHHHHhCCCCcE
Confidence            479999999999999999999999999999998     666654431  1233322 254432    23333322 6999


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      ||+++|.
T Consensus       229 vi~~~g~  235 (345)
T 2j3h_A          229 YFENVGG  235 (345)
T ss_dssp             EEESSCH
T ss_pred             EEECCCH
Confidence            9999984

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.59  E-value=0.00017  Score=61.91  Aligned_cols=94  Identities=18%  Similarity=0.191  Sum_probs=56.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhh-h-------hcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEI-F-------KNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~-------~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||+|.||||++|+.+++.|.+++ .+|.++.+++... ..+...... +       ....+.+...|   ++   ++++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~   81 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSA-GKKYKDACYWFQDRDIPENIKDMVVIPTD---PK---HEEF   81 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTT-TSBHHHHSCCCCSSCCCHHHHTCBCEESC---TT---SGGG
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccc-cccHHHhcccccccccccCceeeEEEeCC---HH---HHhc
Confidence            589999999999999999998875 6888887642211 111111000 0       00111221222   22   2345


Q ss_pred             -cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           73 -QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        73 -~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                       ++|+||.+.+..   .+..+++.+.+.| ++ +|.
T Consensus        82 ~~~DvV~~atp~~---~~~~~a~~~~~aG-~~-VId  112 (354)
T 1ys4_A           82 EDVDIVFSALPSD---LAKKFEPEFAKEG-KL-IFS  112 (354)
T ss_dssp             TTCCEEEECCCHH---HHHHHHHHHHHTT-CE-EEE
T ss_pred             CCCCEEEECCCch---HHHHHHHHHHHCC-CE-EEE
Confidence             899999998743   4566777777778 55 554

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.59  E-value=0.00014  Score=61.97  Aligned_cols=91  Identities=24%  Similarity=0.275  Sum_probs=57.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC---CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG---HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |+||+|.||||++|+.+++.|.+++   .++.++....+   ..+.  +. +....+.+  .|. |++    .+.++|+|
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~---~G~~--~~-~~~~~i~~--~~~-~~~----~~~~vDvV   69 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS---EGKT--YR-FNGKTVRV--QNV-EEF----DWSQVHIA   69 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT---TTCE--EE-ETTEEEEE--EEG-GGC----CGGGCSEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC---CCCc--ee-ecCceeEE--ecC-ChH----HhcCCCEE
Confidence            5789999999999999999999884   46676653221   1111  00 11112222  222 222    34689999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      |.|.|..   .+...++.+.+.| ++.+..|
T Consensus        70 f~a~g~~---~s~~~a~~~~~~G-~~vId~s   96 (336)
T 2r00_A           70 LFSAGGE---LSAKWAPIAAEAG-VVVIDNT   96 (336)
T ss_dssp             EECSCHH---HHHHHHHHHHHTT-CEEEECS
T ss_pred             EECCCch---HHHHHHHHHHHcC-CEEEEcC
Confidence            9998844   4677777888888 6544433

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.59  E-value=8.1e-05  Score=64.04  Aligned_cols=74  Identities=18%  Similarity=0.184  Sum_probs=52.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH---HHHHHHc-cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE---SLIKAIK-QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~---~~~~~~~-~~d~   76 (292)
                      ++|||+||+|.+|..+++.+...|+ +|++++|+     +++.+.+...  .+... ..|..+.+   .+.++.. ++|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~-----~~~~~~~~~~--~g~~~-~~d~~~~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT-----HEKCILLTSE--LGFDA-AINYKKDNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHT--SCCSE-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHHH--cCCce-EEecCchHHHHHHHHhcCCCCCE
Confidence            5799999999999999999999999 99999997     6565444331  23332 23554432   2333332 5999


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      +|+++|.
T Consensus       234 vi~~~G~  240 (357)
T 2zb4_A          234 YFDNVGG  240 (357)
T ss_dssp             EEESCCH
T ss_pred             EEECCCH
Confidence            9999993

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.58  E-value=4.1e-05  Score=64.54  Aligned_cols=85  Identities=16%  Similarity=0.199  Sum_probs=55.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEE--------CCCCCHHHHHHHHc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLY--------GDLQDHESLIKAIK   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~--------~D~~d~~~~~~~~~   72 (292)
                      ||+|+|+| .|.+|+.++..|.+.|++|++++|+     +++.+.+..   .++....        .+..+.+++.+.++
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQW-----PAHIEAIRK---NGLIADFNGEEVVANLPIFSPEEIDHQNE   73 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---HCEEEEETTEEEEECCCEECGGGCCTTSC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECC-----HHHHHHHHh---CCEEEEeCCCeeEecceeecchhhcccCC
Confidence            57999999 5999999999999999999999998     555544332   2433322        12223322323345


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHH
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~   97 (292)
                      ++|+||.+....   ....+++...
T Consensus        74 ~~d~vi~~v~~~---~~~~v~~~l~   95 (316)
T 2ew2_A           74 QVDLIIALTKAQ---QLDAMFKAIQ   95 (316)
T ss_dssp             CCSEEEECSCHH---HHHHHHHHHG
T ss_pred             CCCEEEEEeccc---cHHHHHHHHH
Confidence            899999988743   3444555443

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.57  E-value=0.00085  Score=58.10  Aligned_cols=87  Identities=21%  Similarity=0.259  Sum_probs=63.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |++|+|+|+ |..|+.+++.+.+.|++|++++.++...  .     ..+   .-..+..|..|.+.+.++..++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~--~-----~~~---~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSP--A-----GQV---ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCT--T-----GGG---SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--h-----hhh---CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            889999995 8999999999999999999998763221  0     001   1245678999999998888899999864


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcc
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~  103 (292)
                      .....    ..+++.+++.| ++
T Consensus        70 ~e~~~----~~~~~~l~~~g-i~   87 (380)
T 3ax6_A           70 LEHID----VQTLKKLYNEG-YK   87 (380)
T ss_dssp             CSCSC----HHHHHHHHHTT-CE
T ss_pred             ccCCC----HHHHHHHHHCC-Ce
Confidence            43221    34455666666 55

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.57  E-value=0.00029  Score=60.45  Aligned_cols=90  Identities=19%  Similarity=0.266  Sum_probs=54.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC---EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP---TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      +||.|.||||++|..|++.|.+++|.   +..+.-..+   ..+.-  . +......+...|   ++    .++++|+||
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~s---aG~~~--~-~~~~~~~~~~~~---~~----~~~~~Dvvf   69 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS---AGKSL--K-FKDQDITIEETT---ET----AFEGVDIAL   69 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTT---TTCEE--E-ETTEEEEEEECC---TT----TTTTCSEEE
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcccc---CCCcc--e-ecCCCceEeeCC---HH----HhcCCCEEE
Confidence            68999999999999999999888764   344432211   11110  0 111122222222   11    246899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      .|.|.   ..+...+..+.+.| ++.+-.|
T Consensus        70 ~a~~~---~~s~~~a~~~~~~G-~~vIDlS   95 (366)
T 3pwk_A           70 FSAGS---STSAKYAPYAVKAG-VVVVDNT   95 (366)
T ss_dssp             ECSCH---HHHHHHHHHHHHTT-CEEEECS
T ss_pred             ECCCh---HhHHHHHHHHHHCC-CEEEEcC
Confidence            99873   44666777777788 6544434

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.57  E-value=0.00012  Score=60.59  Aligned_cols=67  Identities=21%  Similarity=0.208  Sum_probs=49.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++++|+|+ |.+|+.++..|.+.|. +|++..|+     .++.+.+.    ..+..+     ..+++.+++.++|+||++
T Consensus       118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~-----~~~a~~la----~~~~~~-----~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          118 AYILILGA-GGASKGIANELYKIVRPTLTVANRT-----MSRFNNWS----LNINKI-----NLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSC-----GGGGTTCC----SCCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHH----Hhcccc-----cHhhHHHHhcCCCEEEEC
Confidence            57999995 8899999999999998 89999998     55553332    122221     345666778899999998


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      .+.
T Consensus       183 Tp~  185 (277)
T 3don_A          183 TPA  185 (277)
T ss_dssp             CC-
T ss_pred             ccC
Confidence            764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.55  E-value=0.00015  Score=62.84  Aligned_cols=74  Identities=20%  Similarity=0.158  Sum_probs=55.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+|+ |.+|+.+++.+...|.+|++++|+     +++.+.++......+..   +..+.+++.+++.++|+||.++
T Consensus       169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~-----~~~l~~~~~~~g~~~~~---~~~~~~~l~~~l~~aDvVi~~~  239 (377)
T 2vhw_A          169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDIN-----IDKLRQLDAEFCGRIHT---RYSSAYELEGAVKRADLVIGAV  239 (377)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTTTSSEE---EECCHHHHHHHHHHCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhcCCeeEe---ccCCHHHHHHHHcCCCEEEECC
Confidence            57999997 999999999999999999999998     66655444322222222   2335667888888999999988


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       240 ~~p  242 (377)
T 2vhw_A          240 LVP  242 (377)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.55  E-value=3.2e-05  Score=63.89  Aligned_cols=32  Identities=22%  Similarity=0.387  Sum_probs=26.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEec
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVR   33 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r   33 (292)
                      |||+|+|++|.+|+.+++.+.+. |+++.++.+
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            68999999999999999988754 688875544

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.53  E-value=0.0001  Score=61.70  Aligned_cols=93  Identities=15%  Similarity=0.175  Sum_probs=53.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----------hcCCcEEEECCCCCHHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----------KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      .+||.++| .|.+|..+++.|+++||+|++.+|++     ++.+.+...          .-...+++..-+.++....+.
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~-----~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v   78 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTA-----SKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEEL   78 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC------------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHH
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHH
Confidence            04799999 89999999999999999999999984     443222111          011233444444454443332


Q ss_pred             H--------ccCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           71 I--------KQVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~--------~~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +        ..-+++|.+.... ...++.+.+.+.++|
T Consensus        79 ~~~~~~~~~~~~~iiid~sT~~-p~~~~~~~~~~~~~g  115 (297)
T 4gbj_A           79 FSMELVEKLGKDGVHVSMSTIS-PETSRQLAQVHEWYG  115 (297)
T ss_dssp             SCHHHHHHHCTTCEEEECSCCC-HHHHHHHHHHHHHTT
T ss_pred             HHHHHHhhcCCCeEEEECCCCC-hHHHHHHHHHHHhcC
Confidence            2        2334555555443 466777777777776

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.51  E-value=0.00017  Score=60.37  Aligned_cols=34  Identities=29%  Similarity=0.427  Sum_probs=31.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |++|.|+||.|.+|..+++.|.+.|++|++++|+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~   54 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRE   54 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence            3689999999999999999999999999999887

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.50  E-value=0.00042  Score=58.62  Aligned_cols=86  Identities=20%  Similarity=0.254  Sum_probs=60.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh----Hhhh---hcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL----IEIF---KNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~---~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |||.|+|+ |.+|..++..|...|.  ++.+++++     .++.+.    +...   ...++.+...|.       +.++
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~-----~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-------~a~~   72 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVN-----KEKAMGDVMDLNHGKAFAPQPVKTSYGTY-------EDCK   72 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGSSSCCEEEEECG-------GGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecc-----hHHHHHHHHHHHhccccccCCeEEEeCcH-------HHhC
Confidence            68999995 9999999999999886  89999987     555432    2221   113455543332       3678


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.++|...             ....+.+++++.+..
T Consensus        73 ~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~  113 (326)
T 3pqe_A           73 DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG  113 (326)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999998754             344566777777765

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.48  E-value=0.00018  Score=61.83  Aligned_cols=89  Identities=16%  Similarity=0.250  Sum_probs=55.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      +||+|.||+|++|+.+++.|.+++ .++.++.+..+.  ..+.+.. ..+.  +..  ..|+.-.+  .+.++++|+||.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~--g~~~~~~~~~~~--~~v--~~dl~~~~--~~~~~~vDvVf~   88 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKA--GQSMESVFPHLR--AQK--LPTLVSVK--DADFSTVDAVFC   88 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT--TSCHHHHCGGGT--TSC--CCCCBCGG--GCCGGGCSEEEE
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc--CCCHHHhCchhc--Ccc--cccceecc--hhHhcCCCEEEE
Confidence            479999999999999999999886 588887664321  1122111 1111  110  13443222  335568999999


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcc
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~  103 (292)
                      |.|...   +...+..+ +.| ++
T Consensus        89 atp~~~---s~~~a~~~-~aG-~~  107 (359)
T 1xyg_A           89 CLPHGT---TQEIIKEL-PTA-LK  107 (359)
T ss_dssp             CCCTTT---HHHHHHTS-CTT-CE
T ss_pred             cCCchh---HHHHHHHH-hCC-CE
Confidence            988553   55666666 667 54

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.48  E-value=8.2e-05  Score=66.00  Aligned_cols=78  Identities=15%  Similarity=0.212  Sum_probs=51.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc----CCcEE-E-----ECCCCCHHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN----LGVNV-L-----YGDLQDHESLIKA   70 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~v~~-v-----~~D~~d~~~~~~~   70 (292)
                      +|||.|+| +|++|..++..|.+.|++|++++|+     +++.+.+..-..    ++++- +     .+.+.-.+++.++
T Consensus         2 ~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~-----~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea   75 (450)
T 3gg2_A            2 SLDIAVVG-IGYVGLVSATCFAELGANVRCIDTD-----RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQA   75 (450)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECC-----HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHH
Confidence            17999999 6999999999999999999999998     666654433100    00000 0     0111111224456


Q ss_pred             HccCCEEEEcCcCC
Q 039623           71 IKQVDVVISTVSRG   84 (292)
Q Consensus        71 ~~~~d~vi~~a~~~   84 (292)
                      ++++|+||.+.+..
T Consensus        76 ~~~aDvViiaVptp   89 (450)
T 3gg2_A           76 VPEADIIFIAVGTP   89 (450)
T ss_dssp             GGGCSEEEECCCCC
T ss_pred             HhcCCEEEEEcCCC
Confidence            77889999888755

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.47  E-value=0.00016  Score=61.60  Aligned_cols=85  Identities=20%  Similarity=0.270  Sum_probs=57.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECCCCC-HHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQD-HESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d-~~~~~~~~~--~~d~v   77 (292)
                      .+|||+||+|.+|...++.+...|.+|++++++     +++.+.++.+   +.. ++..+-.+ .+.+.++..  ++|+|
T Consensus       150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~~~~~~~~~~~~~~~~~~~~~g~D~v  221 (334)
T 3qwb_A          150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST-----DEKLKIAKEY---GAEYLINASKEDILRQVLKFTNGKGVDAS  221 (334)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCcEEEeCCCchHHHHHHHHhCCCCceEE
Confidence            479999999999999999999999999999998     6666555443   332 22222122 234444443  59999


Q ss_pred             EEcCcCCCchhHHHHHHHHH
Q 039623           78 ISTVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~   97 (292)
                      |+++|.   ......++.++
T Consensus       222 id~~g~---~~~~~~~~~l~  238 (334)
T 3qwb_A          222 FDSVGK---DTFEISLAALK  238 (334)
T ss_dssp             EECCGG---GGHHHHHHHEE
T ss_pred             EECCCh---HHHHHHHHHhc
Confidence            999995   33444445443

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.47  E-value=0.00022  Score=58.79  Aligned_cols=69  Identities=17%  Similarity=0.205  Sum_probs=48.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcC-CcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNL-GVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++++|+|+ |.+|+.++..|.+.|. +|++..|+     .++.+.+...... ++..+  ++.+..   .  .++|+||+
T Consensus       121 k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~--~~~~l~---~--~~~DivIn  187 (272)
T 3pwz_A          121 RRVLLLGA-GGAVRGALLPFLQAGPSELVIANRD-----MAKALALRNELDHSRLRIS--RYEALE---G--QSFDIVVN  187 (272)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHCCTTEEEE--CSGGGT---T--CCCSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhccCCeeEe--eHHHhc---c--cCCCEEEE
Confidence            57999996 8899999999999995 89999998     6776554433221 23332  332221   1  67999999


Q ss_pred             cCcC
Q 039623           80 TVSR   83 (292)
Q Consensus        80 ~a~~   83 (292)
                      +.+.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            8764

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.46  E-value=0.00012  Score=62.10  Aligned_cols=68  Identities=24%  Similarity=0.388  Sum_probs=51.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|+| .|.+|+.+++.|.+.|++|++.+|+     +++.+.+.   ..++...       +++.++++++|+||-+
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~l~---~~g~~~~-------~~~~e~~~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRT-----PARAASLA---ALGATIH-------EQARAAARDADIVVSM   94 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---TTTCEEE-------SSHHHHHTTCSEEEEC
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCC-----HHHHHHHH---HCCCEee-------CCHHHHHhcCCEEEEE
Confidence            46899999 6999999999999999999999998     66654433   3344321       2345677889999988


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      .+..
T Consensus        95 vp~~   98 (320)
T 4dll_A           95 LENG   98 (320)
T ss_dssp             CSSH
T ss_pred             CCCH
Confidence            7643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.45  E-value=0.00015  Score=61.44  Aligned_cols=73  Identities=16%  Similarity=0.185  Sum_probs=53.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC---HHHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD---HESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~   76 (292)
                      .+|||+||+|.+|...++.+...|.+|++++++     +++.+.+..+   +...+ .|..+   .+.+.++..  ++|+
T Consensus       142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~~-~~~~~~~~~~~~~~~~~~~g~Dv  212 (325)
T 3jyn_A          142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSS-----PEKAAHAKAL---GAWET-IDYSHEDVAKRVLELTDGKKCPV  212 (325)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTCCEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCEE-EeCCCccHHHHHHHHhCCCCceE
Confidence            479999999999999999999999999999998     7776655543   32221 23333   234444443  6999


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      ||+++|.
T Consensus       213 vid~~g~  219 (325)
T 3jyn_A          213 VYDGVGQ  219 (325)
T ss_dssp             EEESSCG
T ss_pred             EEECCCh
Confidence            9999995

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.45  E-value=0.00014  Score=60.59  Aligned_cols=67  Identities=21%  Similarity=0.298  Sum_probs=50.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      .|+|.|+| .|.+|+.+++.|.+.|++|++.+|+     +++.+.+..   .++..       .+++.++++++|+||.+
T Consensus         1 s~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~~---~g~~~-------~~~~~~~~~~aDvvi~~   64 (287)
T 3pef_A            1 SQKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRS-----PEKAEELAA---LGAER-------AATPCEVVESCPVTFAM   64 (287)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGGHHHHH---TTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CCEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHH---CCCee-------cCCHHHHHhcCCEEEEE
Confidence            47999999 7999999999999999999999998     666644332   34332       12345567778999988


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      .+.
T Consensus        65 vp~   67 (287)
T 3pef_A           65 LAD   67 (287)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.45  E-value=0.00022  Score=60.92  Aligned_cols=85  Identities=11%  Similarity=0.094  Sum_probs=59.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~   76 (292)
                      ++|||+||+|.+|..+++.+...|++|++++|+     +++.+.++.+   +...+ .|..+.   +.+.++..  ++|+
T Consensus       168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~---ga~~~-~d~~~~~~~~~~~~~~~~~~~d~  238 (343)
T 2eih_A          168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGS-----EDKLRRAKAL---GADET-VNYTHPDWPKEVRRLTGGKGADK  238 (343)
T ss_dssp             CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTSTTHHHHHHHHTTTTCEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EcCCcccHHHHHHHHhCCCCceE
Confidence            479999999999999999999999999999998     6666555443   33222 355443   33444443  6899


Q ss_pred             EEEcCcCCCchhHHHHHHHHHH
Q 039623           77 VISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      ||+++| .  ......++.++.
T Consensus       239 vi~~~g-~--~~~~~~~~~l~~  257 (343)
T 2eih_A          239 VVDHTG-A--LYFEGVIKATAN  257 (343)
T ss_dssp             EEESSC-S--SSHHHHHHHEEE
T ss_pred             EEECCC-H--HHHHHHHHhhcc
Confidence            999999 3  234444555443

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.44  E-value=0.00017  Score=57.66  Aligned_cols=68  Identities=31%  Similarity=0.289  Sum_probs=49.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEE-EecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFA-LVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||||.|+| +|.+|+.+++.|.+.|++|++ .+|+     +++.+.+....  ++.... +  +.    +.++++|+||.
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~-----~~~~~~l~~~~--g~~~~~-~--~~----~~~~~aDvVil   87 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRG-----PASLSSVTDRF--GASVKA-V--EL----KDALQADVVIL   87 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTC-----GGGGHHHHHHH--TTTEEE-C--CH----HHHTTSSEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCC-----HHHHHHHHHHh--CCCccc-C--hH----HHHhcCCEEEE
Confidence            57999999 899999999999999999998 7787     66665443321  222222 1  22    33678999999


Q ss_pred             cCcC
Q 039623           80 TVSR   83 (292)
Q Consensus        80 ~a~~   83 (292)
                      +...
T Consensus        88 avp~   91 (220)
T 4huj_A           88 AVPY   91 (220)
T ss_dssp             ESCG
T ss_pred             eCCh
Confidence            8863

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=97.43  E-value=0.0022  Score=53.97  Aligned_cols=65  Identities=25%  Similarity=0.319  Sum_probs=46.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|.| .|.||+.+++.|...|++|.+.+|++...             .++....    ..+++.++++.+|+|+.+.
T Consensus       140 ~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-------------~~~~~~~----~~~~l~ell~~aDiV~l~~  201 (315)
T 3pp8_A          140 FSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSW-------------PGVESYV----GREELRAFLNQTRVLINLL  201 (315)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCC-------------TTCEEEE----SHHHHHHHHHTCSEEEECC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhh-------------hhhhhhc----ccCCHHHHHhhCCEEEEec
Confidence            6899999 79999999999999999999999984321             1121111    1245667777777777766


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       202 Plt  204 (315)
T 3pp8_A          202 PNT  204 (315)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            544

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.43  E-value=0.00056  Score=57.43  Aligned_cols=80  Identities=18%  Similarity=0.208  Sum_probs=54.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhh-hh-cCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEI-FK-NLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++++|+|+ |.+|+.++..|.+.|. +|++..|+.+.  .++.+.+.. +. ..+..+...++.+.+.+.+.+.++|+||
T Consensus       149 k~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~--~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII  225 (312)
T 3t4e_A          149 KTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDF--FEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT  225 (312)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTH--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCch--HHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence            57999996 8899999999999997 79999998221  122322221 11 1234444556666544566778899999


Q ss_pred             EcCcCC
Q 039623           79 STVSRG   84 (292)
Q Consensus        79 ~~a~~~   84 (292)
                      ++.+..
T Consensus       226 NaTp~G  231 (312)
T 3t4e_A          226 NGTKVG  231 (312)
T ss_dssp             ECSSTT
T ss_pred             ECCcCC
Confidence            987654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.43  E-value=0.00048  Score=58.23  Aligned_cols=86  Identities=19%  Similarity=0.183  Sum_probs=59.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh----Hhhhh--cCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL----IEIFK--NLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~~--~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      +||.|+|+ |.+|+.++..|...|.  ++.+++++     .++.+-    +.+..  ..++.+...|.       +.+++
T Consensus        10 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~-----~~k~~g~a~DL~~~~~~~~~~~i~~~~~-------~a~~~   76 (326)
T 3vku_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIF-----KDKTKGDAIDLEDALPFTSPKKIYSAEY-------SDAKD   76 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHTTGGGSCCCEEEECCG-------GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCC-----hHHHHHHHhhHhhhhhhcCCcEEEECcH-------HHhcC
Confidence            68999996 9999999999999885  79999987     554431    11111  12445444332       45789


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+||.++|...             ....+.+.+.+.++.
T Consensus        77 aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~  116 (326)
T 3vku_A           77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG  116 (326)
T ss_dssp             CSEEEECCCCC----------------CHHHHHHHHHTTT
T ss_pred             CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999764             445667777777665

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.42  E-value=0.00023  Score=61.08  Aligned_cols=74  Identities=19%  Similarity=0.262  Sum_probs=53.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc-cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK-QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~-~~d~v   77 (292)
                      .+|||+||+|.+|...++.+...|.+|++++|+     +++.+.+..+   +...+ .|..+.   +.+.++.. ++|+|
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~~-~~~~~~~~~~~~~~~~~~g~Dvv  239 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGS-----TGKCEACERL---GAKRG-INYRSEDFAAVIKAETGQGVDII  239 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHHSSCEEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EeCCchHHHHHHHHHhCCCceEE
Confidence            379999999999999999999999999999998     7777655543   32221 233332   33333332 69999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      |+++|..
T Consensus       240 id~~g~~  246 (353)
T 4dup_A          240 LDMIGAA  246 (353)
T ss_dssp             EESCCGG
T ss_pred             EECCCHH
Confidence            9999853

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.41  E-value=9.7e-05  Score=62.24  Aligned_cols=86  Identities=14%  Similarity=0.061  Sum_probs=56.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhH-hhhhc------CCcEEEE-CCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLI-EIFKN------LGVNVLY-GDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~------~~v~~v~-~D~~d~~~~~~~~~   72 (292)
                      |||.|+|| |.+|..++..|...|+ +|.+++++     +++.+.. .++.+      ...++.. .|      + +.++
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~   69 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIV-----EGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTA   69 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSS-----SSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCC-----ccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHC
Confidence            68999997 9999999999999996 88888887     4444221 11211      1222322 23      2 4578


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.++|...             ....+.+.+.+.+..
T Consensus        70 ~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~  110 (309)
T 1ur5_A           70 NSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS  110 (309)
T ss_dssp             TCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999998764             234455666666654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.41  E-value=0.00023  Score=60.97  Aligned_cols=74  Identities=14%  Similarity=0.180  Sum_probs=53.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d   75 (292)
                      ++|||+||+|.+|..+++.+... |++|++++++     +++.+.++.+   +...+ .|..+.   +.+.++..  ++|
T Consensus       172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~-----~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~~d  242 (347)
T 1jvb_A          172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRA---GADYV-INASMQDPLAEIRRITESKGVD  242 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC-----HHHHHHHHHh---CCCEE-ecCCCccHHHHHHHHhcCCCce
Confidence            47999999989999999999998 9999999988     6666555443   32221 234333   33555553  699


Q ss_pred             EEEEcCcCC
Q 039623           76 VVISTVSRG   84 (292)
Q Consensus        76 ~vi~~a~~~   84 (292)
                      ++|+++|..
T Consensus       243 ~vi~~~g~~  251 (347)
T 1jvb_A          243 AVIDLNNSE  251 (347)
T ss_dssp             EEEESCCCH
T ss_pred             EEEECCCCH
Confidence            999999853

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.41  E-value=0.00019  Score=61.37  Aligned_cols=74  Identities=20%  Similarity=0.377  Sum_probs=53.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECCCCC-HHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQD-HESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d-~~~~~~~~~--~~d~v   77 (292)
                      .+|||+||+|.+|...++.+...|.+|++++++     +++.+.+..+   +.+ ++..+ .+ .+.+.++..  ++|+|
T Consensus       161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR-----TAATEFVKSV---GADIVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHH---TCSEEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCcEEecCc-hhHHHHHHHHhCCCCceEE
Confidence            379999999999999999999999999999998     6676655554   222 33333 33 234444443  59999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      |+++|..
T Consensus       232 id~~g~~  238 (342)
T 4eye_A          232 VDPIGGP  238 (342)
T ss_dssp             EESCC--
T ss_pred             EECCchh
Confidence            9999964

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.41  E-value=0.00038  Score=57.53  Aligned_cols=33  Identities=21%  Similarity=0.439  Sum_probs=27.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEE-ecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFAL-VRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~   34 (292)
                      +||.|.|++|.+|+.+++.+.+. +.++.+. +|+
T Consensus        22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~   56 (288)
T 3ijp_A           22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRK   56 (288)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            58999999999999999998875 5776665 554

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.40  E-value=0.00061  Score=60.04  Aligned_cols=87  Identities=15%  Similarity=0.226  Sum_probs=61.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-C---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC--CH-HHHHHHHccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-H---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ--DH-ESLIKAIKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~--d~-~~~~~~~~~~   74 (292)
                      +||+|.| .|.+|+.++..|.++. +   +|++.+..     ..+.+..+.   .++++...+++  |. +.+.+++++.
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~-----~~~~~~~~~---~g~~~~~~~Vdadnv~~~l~aLl~~~   84 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAE-----GTKVDVAQQ---YGVSFKLQQITPQNYLEVIGSTLEEN   84 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESS-----CCSCCHHHH---HTCEEEECCCCTTTHHHHTGGGCCTT
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccc-----hhhhhHHhh---cCCceeEEeccchhHHHHHHHHhcCC
Confidence            6899999 7999999999999874 4   68877765     222222222   25566666664  44 3355677777


Q ss_pred             CEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           75 DVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        75 d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      |+|||++-.   .....++++|.++|
T Consensus        85 DvVIN~s~~---~~~l~Im~acleaG  107 (480)
T 2ph5_A           85 DFLIDVSIG---ISSLALIILCNQKG  107 (480)
T ss_dssp             CEEEECCSS---SCHHHHHHHHHHHT
T ss_pred             CEEEECCcc---ccCHHHHHHHHHcC
Confidence            999986643   36788999999998

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.40  E-value=0.00019  Score=59.42  Aligned_cols=69  Identities=20%  Similarity=0.274  Sum_probs=47.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcC--CcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNL--GVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++++|+|+ |.+|+.++..|.+.|. +|++..|+     +++.+.+......  ++..+  ++.+   +   ..++|+||
T Consensus       127 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~-----~~~a~~la~~~~~~~~~~~~--~~~~---l---~~~aDiII  192 (281)
T 3o8q_A          127 ATILLIGA-GGAARGVLKPLLDQQPASITVTNRT-----FAKAEQLAELVAAYGEVKAQ--AFEQ---L---KQSYDVII  192 (281)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESS-----HHHHHHHHHHHGGGSCEEEE--EGGG---C---CSCEEEEE
T ss_pred             CEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECC-----HHHHHHHHHHhhccCCeeEe--eHHH---h---cCCCCEEE
Confidence            57999996 8899999999999995 89999998     6666544332221  23333  2212   1   15789999


Q ss_pred             EcCcCC
Q 039623           79 STVSRG   84 (292)
Q Consensus        79 ~~a~~~   84 (292)
                      ++.+..
T Consensus       193 naTp~g  198 (281)
T 3o8q_A          193 NSTSAS  198 (281)
T ss_dssp             ECSCCC
T ss_pred             EcCcCC
Confidence            987643

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.40  E-value=0.00027  Score=60.34  Aligned_cols=74  Identities=15%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~   76 (292)
                      .+|||+||+|.+|...++.+...|.+|++++++     +++.+.+..+   +.+.+ .|..+.   +.+.++..  ++|+
T Consensus       146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~l---ga~~~-~~~~~~~~~~~~~~~~~~~g~Dv  216 (340)
T 3gms_A          146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRN-----NKHTEELLRL---GAAYV-IDTSTAPLYETVMELTNGIGADA  216 (340)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhC---CCcEE-EeCCcccHHHHHHHHhCCCCCcE
Confidence            479999999999999999999899999999998     6666555543   33322 233332   33444443  6999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      ||+++|..
T Consensus       217 vid~~g~~  224 (340)
T 3gms_A          217 AIDSIGGP  224 (340)
T ss_dssp             EEESSCHH
T ss_pred             EEECCCCh
Confidence            99999854

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.39  E-value=0.00031  Score=60.20  Aligned_cols=92  Identities=20%  Similarity=0.198  Sum_probs=56.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEec-CCCCCCCcchhhHh-hh-------hcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVR-ESTASDPVKGKLIE-IF-------KNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r-~~~~~~~~~~~~~~-~~-------~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      +||.|.||||++|+.+++.|.++. .++.++.. +.+.  ..+..... .+       ....+.+  .|. |++.    +
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----~   75 (350)
T 2ep5_A            5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI--GKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----H   75 (350)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT--TSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----G
T ss_pred             cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc--CCCHHHhcCcccccccccCCceeEE--eeC-CHHH----h
Confidence            579999999999999999988775 57877752 2111  11111000 00       0012222  333 3332    3


Q ss_pred             ccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           72 KQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        72 ~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +++|+||.|.+.   ..+..+++.+.++| ++ +|.
T Consensus        76 ~~vDvVf~atp~---~~s~~~a~~~~~aG-~~-VId  106 (350)
T 2ep5_A           76 KDVDVVLSALPN---ELAESIELELVKNG-KI-VVS  106 (350)
T ss_dssp             TTCSEEEECCCH---HHHHHHHHHHHHTT-CE-EEE
T ss_pred             cCCCEEEECCCh---HHHHHHHHHHHHCC-CE-EEE
Confidence            689999988874   35677888888888 66 443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.38  E-value=0.0002  Score=60.04  Aligned_cols=72  Identities=19%  Similarity=0.246  Sum_probs=53.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      .+|+|+||+|.+|...++.+...|++|++++|+     +++.+.++.+   +.+.+ .|..+.+++.+.+.++|+||+ +
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~~-~~~~~~~~~~~~~~~~d~vid-~  196 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLAL---GAEEA-ATYAEVPERAKAWGGLDLVLE-V  196 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHHT---TCSEE-EEGGGHHHHHHHTTSEEEEEE-C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EECCcchhHHHHhcCceEEEE-C
Confidence            479999999999999999999999999999998     6666554433   43332 344441334444578999999 8


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      |.
T Consensus       197 g~  198 (302)
T 1iz0_A          197 RG  198 (302)
T ss_dssp             SC
T ss_pred             CH
Confidence            85

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.35  E-value=0.00022  Score=59.73  Aligned_cols=66  Identities=14%  Similarity=0.076  Sum_probs=49.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|..+++.|.+.||+|++.+|+     +++.+.+.   ..++..       .+++.++++ +|+||.+.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~~~~~---~~g~~~-------~~~~~~~~~-aDvvi~~v   78 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIR-----IEAMTPLA---EAGATL-------ADSVADVAA-ADLIHITV   78 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSS-----TTTSHHHH---HTTCEE-------CSSHHHHTT-SSEEEECC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHH---HCCCEE-------cCCHHHHHh-CCEEEEEC
Confidence            4899999 7999999999999999999999998     55554333   334432       123456677 99999888


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus        79 p~~   81 (296)
T 3qha_A           79 LDD   81 (296)
T ss_dssp             SSH
T ss_pred             CCh
Confidence            743

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.34  E-value=0.00063  Score=56.85  Aligned_cols=27  Identities=33%  Similarity=0.329  Sum_probs=24.7

Q ss_pred             CcchHHHHHHHHhCCCCEEEEecCCCC
Q 039623           11 GYIGKKILEASVKAGHPTFALVRESTA   37 (292)
Q Consensus        11 G~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (292)
                      |..|.+++++++++|++|+.+.|..+.
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~sl   91 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARSA   91 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCCc
Confidence            999999999999999999999997543

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.33  E-value=0.00021  Score=58.50  Aligned_cols=68  Identities=21%  Similarity=0.163  Sum_probs=50.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|+| +|.+|+.+++.|.+.|++|.+.+|+     +++.+.+....  ++..    ..+   +.++++++|+||.+
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~-----~~~~~~~~~~~--g~~~----~~~---~~~~~~~~D~Vi~~   67 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSS-----LERSKEIAEQL--ALPY----AMS---HQDLIDQVDLVILG   67 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS-----HHHHHHHHHHH--TCCB----CSS---HHHHHHTCSEEEEC
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCC-----HHHHHHHHHHc--CCEe----eCC---HHHHHhcCCEEEEE
Confidence            68999999 7999999999999999999999998     66654443211  3221    123   34566789999999


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      ...
T Consensus        68 v~~   70 (259)
T 2ahr_A           68 IKP   70 (259)
T ss_dssp             SCG
T ss_pred             eCc
Confidence            873

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.31  E-value=0.00023  Score=59.83  Aligned_cols=67  Identities=21%  Similarity=0.268  Sum_probs=51.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|..+++.|.+.|++|++.+|+     +++.+.+..   .++..       .+++.++++++|+||.+.
T Consensus        10 ~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~~~~~~---~g~~~-------~~~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A           10 FDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRS-----PGKAAALVA---AGAHL-------CESVKAALSASPATIFVL   73 (306)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHHH---HTCEE-------CSSHHHHHHHSSEEEECC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH---CCCee-------cCCHHHHHhcCCEEEEEe
Confidence            6899999 7999999999999999999999998     666644433   24322       123456677899999988


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus        74 p~~   76 (306)
T 3l6d_A           74 LDN   76 (306)
T ss_dssp             SSH
T ss_pred             CCH
Confidence            754

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.30  E-value=0.00029  Score=58.79  Aligned_cols=67  Identities=18%  Similarity=0.174  Sum_probs=46.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|+| .|.+|+.+++.|.+.|++|++.+ +     +++.+.+..   .++..       .+++.++++++|+||.+
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~-----~~~~~~~~~---~g~~~-------~~~~~~~~~~~D~vi~~   65 (295)
T 1yb4_A            3 AMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-I-----GPVADELLS---LGAVN-------VETARQVTEFADIIFIM   65 (295)
T ss_dssp             -CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-S-----SCCCHHHHT---TTCBC-------CSSHHHHHHTCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-C-----HHHHHHHHH---cCCcc-------cCCHHHHHhcCCEEEEE
Confidence            68999999 79999999999999999998887 5     444433322   23221       12244556788999987


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      .+..
T Consensus        66 vp~~   69 (295)
T 1yb4_A           66 VPDT   69 (295)
T ss_dssp             CSSH
T ss_pred             CCCH
Confidence            7543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.29  E-value=0.00035  Score=60.21  Aligned_cols=85  Identities=18%  Similarity=0.191  Sum_probs=56.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEE-EECCCCCH-HHHHHHH-ccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNV-LYGDLQDH-ESLIKAI-KQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~-v~~D~~d~-~~~~~~~-~~~d~vi   78 (292)
                      .+|||+||+|.+|..+++.+...|++|++++|+     +++.+.++.+   +.+. +..+-.+. +.+.+.. .++|+||
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~~~~~~~~~~~~~~~~~~~~g~D~vi  236 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS-----DEKSAFLKSL---GCDRPINYKTEPVGTVLKQEYPEGVDVVY  236 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHc---CCcEEEecCChhHHHHHHHhcCCCCCEEE
Confidence            379999999999999999999999999999998     6666555443   3332 22221222 2233322 2689999


Q ss_pred             EcCcCCCchhHHHHHHHHH
Q 039623           79 STVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~   97 (292)
                      +++|.   ......++.++
T Consensus       237 d~~g~---~~~~~~~~~l~  252 (362)
T 2c0c_A          237 ESVGG---AMFDLAVDALA  252 (362)
T ss_dssp             ECSCT---HHHHHHHHHEE
T ss_pred             ECCCH---HHHHHHHHHHh
Confidence            99984   33344444443

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.29  E-value=0.00025  Score=58.90  Aligned_cols=66  Identities=15%  Similarity=0.127  Sum_probs=48.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||+|.|+| .|.+|+.+++.|.+ |++|++.+|+     +++.+.+...   ++...  +      +.+++.++|+||.+
T Consensus         1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~-----~~~~~~~~~~---g~~~~--~------~~~~~~~~D~vi~~   62 (289)
T 2cvz_A            1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRT-----FEKALRHQEE---FGSEA--V------PLERVAEARVIFTC   62 (289)
T ss_dssp             -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSS-----THHHHHHHHH---HCCEE--C------CGGGGGGCSEEEEC
T ss_pred             CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHHHC---CCccc--C------HHHHHhCCCEEEEe
Confidence            88999999 69999999999999 9999999998     6665444332   33221  1      22456789999998


Q ss_pred             CcCC
Q 039623           81 VSRG   84 (292)
Q Consensus        81 a~~~   84 (292)
                      ....
T Consensus        63 v~~~   66 (289)
T 2cvz_A           63 LPTT   66 (289)
T ss_dssp             CSSH
T ss_pred             CCCh
Confidence            8754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.28  E-value=0.00056  Score=58.57  Aligned_cols=86  Identities=21%  Similarity=0.286  Sum_probs=58.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECCCCC-HHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQD-HESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d-~~~~~~~~~--~~d~v   77 (292)
                      ++|+|+||+|.+|...++.+...|.+|++++++     +++.+.++.+   +.. ++..+-.+ .+.+.++..  ++|+|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~~~~~~~~~~~~~v~~~~~~~g~D~v  237 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRR-----DEQIALLKDI---GAAHVLNEKAPDFEATLREVMKAEQPRIF  237 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESC-----GGGHHHHHHH---TCSEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence            468999999999999999999999999999988     6776655543   332 22222122 233444443  69999


Q ss_pred             EEcCcCCCchhHHHHHHHHHH
Q 039623           78 ISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~   98 (292)
                      |+++|..   .....++.++.
T Consensus       238 id~~g~~---~~~~~~~~l~~  255 (349)
T 3pi7_A          238 LDAVTGP---LASAIFNAMPK  255 (349)
T ss_dssp             EESSCHH---HHHHHHHHSCT
T ss_pred             EECCCCh---hHHHHHhhhcC
Confidence            9999853   23445555443

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.27  E-value=0.00049  Score=57.71  Aligned_cols=67  Identities=18%  Similarity=0.149  Sum_probs=47.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|+     +++.+.+..   .+......|+      .++++++|+||.+.
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~~---~g~~~~~~~~------~e~~~~aDvvi~~v   72 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLN-----PQACANLLA---EGACGAAASA------REFAGVVDALVILV   72 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---TTCSEEESSS------TTTTTTCSEEEECC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHHH---cCCccccCCH------HHHHhcCCEEEEEC
Confidence            6899999 7999999999999999999999998     666544332   2333222332      23455677777766


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      +.
T Consensus        73 p~   74 (303)
T 3g0o_A           73 VN   74 (303)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.27  E-value=0.00023  Score=59.56  Aligned_cols=67  Identities=22%  Similarity=0.264  Sum_probs=49.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|+.+++.|.+.|++|.+.+|+     +++.+.+.   ..++..    ..+   +.++++++|+||.+.
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~-----~~~~~~~~---~~g~~~----~~~---~~~~~~~~D~vi~~v   69 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRN-----PEAIADVI---AAGAET----AST---AKAIAEQCDVIITML   69 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---HTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHH---HCCCee----cCC---HHHHHhCCCEEEEEC
Confidence            6899999 7999999999999999999999998     55554333   234432    123   345567899999988


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus        70 ~~~   72 (299)
T 1vpd_A           70 PNS   72 (299)
T ss_dssp             SSH
T ss_pred             CCH
Confidence            743

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.26  E-value=0.0012  Score=56.71  Aligned_cols=88  Identities=22%  Similarity=0.090  Sum_probs=60.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH----c--cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI----K--QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~----~--~~   74 (292)
                      .+|||+|| |.+|...++.+...|.+ |++++++     ++|.+.++.+ ...+..+..|-.+.+++.+.+    .  ++
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~  253 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDID-----EGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEP  253 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESC-----HHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCC
Confidence            37999998 99999999999999986 9999888     7788777776 444444444544444443333    2  69


Q ss_pred             CEEEEcCcCCCchhHHHHHHHHHH
Q 039623           75 DVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        75 d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      |+||.++|..  ......++.++.
T Consensus       254 Dvvid~~g~~--~~~~~~~~~l~~  275 (363)
T 3m6i_A          254 AVALECTGVE--SSIAAAIWAVKF  275 (363)
T ss_dssp             SEEEECSCCH--HHHHHHHHHSCT
T ss_pred             CEEEECCCCh--HHHHHHHHHhcC
Confidence            9999999843  123344444443

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.25  E-value=0.00064  Score=58.65  Aligned_cols=74  Identities=23%  Similarity=0.245  Sum_probs=55.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      .+|||+|+ |.+|...++.+...|.+|++++++     +++.+.+..  ..+... ..|..+.+.+.++..++|+||+++
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~--~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~  259 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTS-----PSKKEEALK--NFGADS-FLVSRDQEQMQAAAGTLDGIIDTV  259 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----GGGHHHHHH--TSCCSE-EEETTCHHHHHHTTTCEEEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--hcCCce-EEeccCHHHHHHhhCCCCEEEECC
Confidence            36999996 999999999999999999999988     555544331  234332 235567777777667899999999


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      |..
T Consensus       260 g~~  262 (366)
T 1yqd_A          260 SAV  262 (366)
T ss_dssp             SSC
T ss_pred             CcH
Confidence            865

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.24  E-value=0.00075  Score=56.72  Aligned_cols=91  Identities=13%  Similarity=0.114  Sum_probs=58.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-C--CCEEEEecCCCCCCCcchhhHhhhhcC--CcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-G--HPTFALVRESTASDPVKGKLIEIFKNL--GVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |||.|+||+|.+|..++..|... +  .++..++++. .. ..+.   .++.+.  ...+....-.+   ..+.++++|+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~-~G~a---~Dl~~~~~~~~v~~~~~~~---~~~~~~~aDi   72 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT-PGVA---VDLSHIPTAVKIKGFSGED---ATPALEGADV   72 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-TH-HHHH---HHHHTSCSSEEEEEECSSC---CHHHHTTCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cc-hhHH---HHhhCCCCCceEEEecCCC---cHHHhCCCCE
Confidence            68999999999999999988775 5  4788888873 11 1112   222222  22222110011   2356789999


Q ss_pred             EEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           77 VISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        77 vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ||.++|...             ....+.+.+++.+..
T Consensus        73 vii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~  109 (312)
T 3hhp_A           73 VLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC  109 (312)
T ss_dssp             EEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            999998765             445666667777665

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.22  E-value=0.00033  Score=60.19  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=53.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|..+++.|.+.|++|.+.+|+     +++.+.+.   ..++..    ..+.+++.+..+.+|+||.+.
T Consensus        23 mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~-----~~~~~~l~---~~g~~~----~~s~~e~~~~a~~~DvVi~~v   89 (358)
T 4e21_A           23 MQIGMIG-LGRMGADMVRRLRKGGHECVVYDLN-----VNAVQALE---REGIAG----ARSIEEFCAKLVKPRVVWLMV   89 (358)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---TTTCBC----CSSHHHHHHHSCSSCEEEECS
T ss_pred             CEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHH---HCCCEE----eCCHHHHHhcCCCCCEEEEeC
Confidence            7899999 7999999999999999999999998     66654433   233321    224333323233449999988


Q ss_pred             cCCCchhHHHHHHHH
Q 039623           82 SRGQIPEQAKIIAAV   96 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~   96 (292)
                      +..   ....+++..
T Consensus        90 p~~---~v~~vl~~l  101 (358)
T 4e21_A           90 PAA---VVDSMLQRM  101 (358)
T ss_dssp             CGG---GHHHHHHHH
T ss_pred             CHH---HHHHHHHHH
Confidence            755   344444443

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.21  E-value=0.00056  Score=57.57  Aligned_cols=72  Identities=26%  Similarity=0.329  Sum_probs=52.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhh-hh------cCCcEEEECCCCCHHHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEI-FK------NLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~------~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      ||||.|+| +|.+|..++..|.+.|  ++|++++|+     +++.+.+.. +.      ...+.....|      + +.+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~d------~-~~~   67 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDAN-----EAKVKADQIDFQDAMANLEAHGNIVIND------W-AAL   67 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSSSCCEEEESC------G-GGG
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCC-----HHHHHHHHHHHHhhhhhcCCCeEEEeCC------H-HHh
Confidence            89999999 7999999999999999  799999998     555543321 11      1223433333      2 356


Q ss_pred             ccCCEEEEcCcCCC
Q 039623           72 KQVDVVISTVSRGQ   85 (292)
Q Consensus        72 ~~~d~vi~~a~~~~   85 (292)
                      +++|+||.+++...
T Consensus        68 ~~aDvViiav~~~~   81 (309)
T 1hyh_A           68 ADADVVISTLGNIK   81 (309)
T ss_dssp             TTCSEEEECCSCGG
T ss_pred             CCCCEEEEecCCcc
Confidence            79999999998643

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.21  E-value=0.00017  Score=63.79  Aligned_cols=77  Identities=26%  Similarity=0.313  Sum_probs=49.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh----cCCcEE-E-----ECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK----NLGVNV-L-----YGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~v~~-v-----~~D~~d~~~~~~~~   71 (292)
                      |+|.|+| +|++|..++..|.+.|++|++++|+     +++.+.+..-.    .++.+- +     .+.+.-..++.+++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~-----~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~   74 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS-----STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAV   74 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHh
Confidence            6899999 7999999999999999999999998     66654443210    000000 0     00111111234566


Q ss_pred             ccCCEEEEcCcCC
Q 039623           72 KQVDVVISTVSRG   84 (292)
Q Consensus        72 ~~~d~vi~~a~~~   84 (292)
                      +++|+||.+.+..
T Consensus        75 ~~aDvviiaVptp   87 (436)
T 1mv8_A           75 LDSDVSFICVGTP   87 (436)
T ss_dssp             HTCSEEEECCCCC
T ss_pred             ccCCEEEEEcCCC
Confidence            7899999988654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.20  E-value=0.0012  Score=54.98  Aligned_cols=87  Identities=10%  Similarity=0.043  Sum_probs=59.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh----Hhhhh---cCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL----IEIFK---NLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~~---~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |||.|+|| |.+|..++..|...|+  +|..++++     +++.+-    +....   .....+...+  |    .++++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~-----~~~~~g~~~dl~~~~~~~~~~~~i~~t~--d----~~a~~   68 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGGA--D----YSLLK   68 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHHTTTCCCEEEEES--C----GGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECC-----hHHHHHHHHHHHhhhhhcCCCCEEEEeC--C----HHHhC
Confidence            68999998 9999999999999887  89999998     555431    11111   1233333221  2    35688


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.++|...             ....+.+.+.+.+.+
T Consensus        69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~  109 (294)
T 1oju_A           69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA  109 (294)
T ss_dssp             TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999998765             344555666666654

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.18  E-value=0.00025  Score=59.97  Aligned_cols=72  Identities=24%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcch-hhHhhhhcCCcEEEEC-CCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKG-KLIEIFKNLGVNVLYG-DLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~v~~v~~-D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|.|+| .|.+|..+++.|.+.| ++|++.+|++..  +++. +..+.+...++   .. |      ..++++++|+||
T Consensus        25 m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~--~~~~~~~~~~~~~~g~---~~~s------~~e~~~~aDvVi   92 (317)
T 4ezb_A           25 TTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFND--PAASGALRARAAELGV---EPLD------DVAGIACADVVL   92 (317)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGC--TTTHHHHHHHHHHTTC---EEES------SGGGGGGCSEEE
T ss_pred             CeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCcc--ccchHHHHHHHHHCCC---CCCC------HHHHHhcCCEEE
Confidence            6899999 7999999999999999 999999998321  1222 12233333454   11 2      234677899999


Q ss_pred             EcCcCCC
Q 039623           79 STVSRGQ   85 (292)
Q Consensus        79 ~~a~~~~   85 (292)
                      .+.+...
T Consensus        93 ~avp~~~   99 (317)
T 4ezb_A           93 SLVVGAA   99 (317)
T ss_dssp             ECCCGGG
T ss_pred             EecCCHH
Confidence            9887654

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.18  E-value=0.0008  Score=57.69  Aligned_cols=95  Identities=14%  Similarity=0.177  Sum_probs=55.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhh------h--cCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIF------K--NLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~------~--~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||.|.||||++|..|++.|.++. .++..+..+++.  ..+....-.+      .  .....+...   +.+    .+.
T Consensus         8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~sa--Gk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~   78 (359)
T 4dpk_A            8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSV--GKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMD   78 (359)
T ss_dssp             EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTT--TSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCT
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhc--CCChhHhcccccccccccccccceEEeC---CHH----Hhc
Confidence            379999999999999999887765 467766543221  1122111000      0  012222222   222    246


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      ++|+||.|.+...   +..+...+.+.| ++.+-.|+
T Consensus        79 ~vDvvf~a~p~~~---s~~~a~~~~~~G-~~vIDlSa  111 (359)
T 4dpk_A           79 DVDIIFSPLPQGA---AGPVEEQFAKEG-FPVISNSP  111 (359)
T ss_dssp             TCCEEEECCCTTT---HHHHHHHHHHTT-CEEEECSS
T ss_pred             CCCEEEECCChHH---HHHHHHHHHHCC-CEEEEcCC
Confidence            8999999988653   456666667778 66665543

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.18  E-value=0.0008  Score=57.69  Aligned_cols=95  Identities=14%  Similarity=0.177  Sum_probs=55.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhh------h--cCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIF------K--NLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~------~--~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||.|.||||++|..|++.|.++. .++..+..+++.  ..+....-.+      .  .....+...   +.+    .+.
T Consensus         8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~sa--Gk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~   78 (359)
T 4dpl_A            8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSV--GKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMD   78 (359)
T ss_dssp             EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTT--TSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCT
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhc--CCChhHhcccccccccccccccceEEeC---CHH----Hhc
Confidence            379999999999999999887765 467766543221  1122111000      0  012222222   222    246


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      ++|+||.|.+...   +..+...+.+.| ++.+-.|+
T Consensus        79 ~vDvvf~a~p~~~---s~~~a~~~~~~G-~~vIDlSa  111 (359)
T 4dpl_A           79 DVDIIFSPLPQGA---AGPVEEQFAKEG-FPVISNSP  111 (359)
T ss_dssp             TCCEEEECCCTTT---HHHHHHHHHHTT-CEEEECSS
T ss_pred             CCCEEEECCChHH---HHHHHHHHHHCC-CEEEEcCC
Confidence            8999999988653   456666667778 66665543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.17  E-value=0.0024  Score=53.87  Aligned_cols=86  Identities=19%  Similarity=0.157  Sum_probs=59.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchh----hHhhh---hcCCcEEEE-CCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGK----LIEIF---KNLGVNVLY-GDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~----~~~~~---~~~~v~~v~-~D~~d~~~~~~~~~   72 (292)
                      +||.|+|| |.+|..++..|...|+ +|..++++     +++.+    .+...   ......+.. .|      . ++++
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~   74 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIA-----EGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIE   74 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSS-----SSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCC-----chhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHC
Confidence            68999997 9999999999999998 99999998     55442    11111   112333332 33      2 4688


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.++|...             ....+.+++.+.+..
T Consensus        75 ~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~  115 (324)
T 3gvi_A           75 GADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA  115 (324)
T ss_dssp             TCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC
Confidence            9999999998764             344566666766665

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.17  E-value=0.00021  Score=58.98  Aligned_cols=71  Identities=23%  Similarity=0.207  Sum_probs=48.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC--CcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL--GVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++++|+|+ |.+|+.++..|.+.|++|++..|+     .++.+.+......  .+.  ..|+   +++.+  .++|+||+
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~-----~~~a~~l~~~~~~~~~~~--~~~~---~~~~~--~~~DivIn  186 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRT-----FSKTKELAERFQPYGNIQ--AVSM---DSIPL--QTYDLVIN  186 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGSCEE--EEEG---GGCCC--SCCSEEEE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHccccCCeE--EeeH---HHhcc--CCCCEEEE
Confidence            57999997 789999999999999999999998     6666554432221  222  2232   11110  37999999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      +++...
T Consensus       187 ~t~~~~  192 (272)
T 1p77_A          187 ATSAGL  192 (272)
T ss_dssp             CCCC--
T ss_pred             CCCCCC
Confidence            998654

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.17  E-value=0.0012  Score=56.64  Aligned_cols=90  Identities=21%  Similarity=0.269  Sum_probs=54.6

Q ss_pred             ceEEEEccCCcchHHHHH-HHHhCCC---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILE-ASVKAGH---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |+|.|.||||++|+.|++ .|.++.+   ++..++-++.   ..+...   +......+  -+..+++.    ++++|+|
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a---G~~~~~---~~~~~~~~--~~~~~~~~----~~~~Dvv   68 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI---GVPAPN---FGKDAGML--HDAFDIES----LKQLDAV   68 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSST---TSBCCC---SSSCCCBC--EETTCHHH----HTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecccc---CcCHHH---hCCCceEE--EecCChhH----hccCCEE
Confidence            689999999999999999 7777664   4555533211   112111   11111222  23334333    5789999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcc-eeec
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVK-RFLP  107 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~-~~i~  107 (292)
                      |.|.|.   ..+..++..+.+.| ++ .+|-
T Consensus        69 f~a~~~---~~s~~~~~~~~~~G-~k~~VID   95 (370)
T 3pzr_A           69 ITCQGG---SYTEKVYPALRQAG-WKGYWID   95 (370)
T ss_dssp             EECSCH---HHHHHHHHHHHHTT-CCCEEEE
T ss_pred             EECCCh---HHHHHHHHHHHHCC-CCEEEEe
Confidence            999884   34566677777778 75 4554

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.16  E-value=0.00041  Score=56.37  Aligned_cols=68  Identities=15%  Similarity=0.155  Sum_probs=50.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCC----CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGH----PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      ||||.|+| +|.+|+.+++.|.+.|+    +|++.+|+     +++.+.+...  .++..    ..+   ..++++++|+
T Consensus         2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~-----~~~~~~~~~~--~g~~~----~~~---~~e~~~~aDv   66 (247)
T 3gt0_A            2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLN-----TANLKNASEK--YGLTT----TTD---NNEVAKNADI   66 (247)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSC-----HHHHHHHHHH--HCCEE----CSC---HHHHHHHCSE
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCC-----HHHHHHHHHH--hCCEE----eCC---hHHHHHhCCE
Confidence            37899999 89999999999999998    99999998     6666544321  13332    123   3456678999


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      ||.+...
T Consensus        67 Vilav~~   73 (247)
T 3gt0_A           67 LILSIKP   73 (247)
T ss_dssp             EEECSCT
T ss_pred             EEEEeCH
Confidence            9999843

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.15  E-value=0.00036  Score=58.40  Aligned_cols=67  Identities=16%  Similarity=0.236  Sum_probs=48.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|+     +++.+.+.   ..++..    ..+   ..++++++|+||.+.
T Consensus         5 ~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~-----~~~~~~~~---~~g~~~----~~~---~~~~~~~~D~vi~~v   68 (301)
T 3cky_A            5 IKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLM-----EANVAAVV---AQGAQA----CEN---NQKVAAASDIIFTSL   68 (301)
T ss_dssp             CEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSS-----HHHHHHHH---TTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHH---HCCCee----cCC---HHHHHhCCCEEEEEC
Confidence            6899999 7999999999999999999999988     55554332   224432    112   334566789999887


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus        69 p~~   71 (301)
T 3cky_A           69 PNA   71 (301)
T ss_dssp             SSH
T ss_pred             CCH
Confidence            543

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.15  E-value=0.00068  Score=56.52  Aligned_cols=67  Identities=19%  Similarity=0.283  Sum_probs=49.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|+     +++.+.+.   ..++...    .+   ..++++++|+||.+.
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~~~~~---~~g~~~~----~~---~~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVF-----PDACKEFQ---DAGEQVV----SS---PADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSS-----THHHHHHH---TTTCEEC----SS---HHHHHHHCSEEEECC
T ss_pred             CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH---HcCCeec----CC---HHHHHhcCCEEEEeC
Confidence            5899999 7999999999999999999999998     65554333   2344321    12   335566789999887


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus        65 p~~   67 (296)
T 2gf2_A           65 PTS   67 (296)
T ss_dssp             SSH
T ss_pred             CCH
Confidence            543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.14  E-value=0.00059  Score=58.51  Aligned_cols=84  Identities=18%  Similarity=0.116  Sum_probs=54.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC------CC-CCHHHHHHHHccC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG------DL-QDHESLIKAIKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~------D~-~d~~~~~~~~~~~   74 (292)
                      |+|+|+| .|.+|+.++..|.+.|++|++++|+     +++.+.+....  ++.+...      .+ ...+++.++++++
T Consensus         5 mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (359)
T 1bg6_A            5 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDRG--AIIAEGPGLAGTAHPDLLTSDIGLAVKDA   76 (359)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHT--SEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHhcC--CeEEeccccccccccceecCCHHHHHhcC
Confidence            6899999 5999999999999999999999998     55554443221  2221110      01 0112344567789


Q ss_pred             CEEEEcCcCCCchhHHHHHHHH
Q 039623           75 DVVISTVSRGQIPEQAKIIAAV   96 (292)
Q Consensus        75 d~vi~~a~~~~~~~~~~l~~a~   96 (292)
                      |+||.+.....   ...+++.+
T Consensus        77 D~vi~~v~~~~---~~~~~~~l   95 (359)
T 1bg6_A           77 DVILIVVPAIH---HASIAANI   95 (359)
T ss_dssp             SEEEECSCGGG---HHHHHHHH
T ss_pred             CEEEEeCCchH---HHHHHHHH
Confidence            99999887654   24444443

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.14  E-value=0.0005  Score=57.95  Aligned_cols=71  Identities=21%  Similarity=0.165  Sum_probs=50.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ||+|.|+| .|.+|..+++.|.+.|+ +|++.+|+++   +++.+.   +...++..    ..+   ..++++++|+||.
T Consensus        24 ~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~---~~~~~~---~~~~g~~~----~~~---~~e~~~~aDvVi~   89 (312)
T 3qsg_A           24 AMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASA---ESWRPR---AEELGVSC----KAS---VAEVAGECDVIFS   89 (312)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCH---HHHHHH---HHHTTCEE----CSC---HHHHHHHCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCC---HHHHHH---HHHCCCEE----eCC---HHHHHhcCCEEEE
Confidence            47899999 69999999999999999 9999999620   233332   22334432    112   4456778999999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      +.....
T Consensus        90 ~vp~~~   95 (312)
T 3qsg_A           90 LVTAQA   95 (312)
T ss_dssp             CSCTTT
T ss_pred             ecCchh
Confidence            988665

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.13  E-value=0.00042  Score=60.87  Aligned_cols=75  Identities=20%  Similarity=0.203  Sum_probs=51.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC-------------CCCCHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG-------------DLQDHESL   67 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~-------------D~~d~~~~   67 (292)
                      |.+|.|.| .||+|..++..|.+.||+|++++.+     ++|.+.+..-.   ..+.+-             .+.=..+.
T Consensus        21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did-----~~kV~~ln~G~---~pi~Epgl~ell~~~~~~g~l~~tt~~   91 (444)
T 3vtf_A           21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVN-----PSIVERLRAGR---PHIYEPGLEEALGRALSSGRLSFAESA   91 (444)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC-----HHHHHHHHTTC---CSSCCTTHHHHHHHHHHTTCEEECSSH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECC-----HHHHHHHHCCC---CCCCCCCHHHHHHHHHHcCCeeEEcCH
Confidence            67899999 8999999999999999999999998     66665543211   111110             11001123


Q ss_pred             HHHHccCCEEEEcCcCC
Q 039623           68 IKAIKQVDVVISTVSRG   84 (292)
Q Consensus        68 ~~~~~~~d~vi~~a~~~   84 (292)
                      .++++.+|++|-|.+-+
T Consensus        92 ~~ai~~ad~~~I~VpTP  108 (444)
T 3vtf_A           92 EEAVAATDATFIAVGTP  108 (444)
T ss_dssp             HHHHHTSSEEEECCCCC
T ss_pred             HHHHhcCCceEEEecCC
Confidence            45567889999998754

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.13  E-value=0.0053  Score=49.90  Aligned_cols=100  Identities=22%  Similarity=0.209  Sum_probs=64.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC--------------CCcchhhHhhh---hcCCc--EEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS--------------DPVKGKLIEIF---KNLGV--NVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~~~~---~~~~v--~~v~~D~   61 (292)
                      ++|+|.|+ |.+|+++++.|...|. ++++++++.-..              -..|.+.+...   .++++  +.+..++
T Consensus        29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  107 (251)
T 1zud_1           29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL  107 (251)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            47999996 6699999999999996 677776542110              01233222221   13344  4444445


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                       +.+.+.++++++|+||.+...  ...-..+.++|.+.+ ++.+.
T Consensus       108 -~~~~~~~~~~~~DvVi~~~d~--~~~r~~l~~~~~~~~-~p~i~  148 (251)
T 1zud_1          108 -TGEALKDAVARADVVLDCTDN--MATRQEINAACVALN-TPLIT  148 (251)
T ss_dssp             -CHHHHHHHHHHCSEEEECCSS--HHHHHHHHHHHHHTT-CCEEE
T ss_pred             -CHHHHHHHHhcCCEEEECCCC--HHHHHHHHHHHHHhC-CCEEE
Confidence             446677888899999998763  344566777788877 55443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.13  E-value=0.00088  Score=57.58  Aligned_cols=87  Identities=23%  Similarity=0.287  Sum_probs=61.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCC------------------CC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL------------------QD   63 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~------------------~d   63 (292)
                      .+|+|+|+ |-+|...++.+...|.+|++++|+     +++.+.+..   .+.+++..|.                  .+
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~~---lGa~~~~l~~~~~~~~gya~~~~~~~~~~~  255 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVR-----PEVAEQVRS---VGAQWLDLGIDAAGEGGYARELSEAERAQQ  255 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS-----GGGHHHHHH---TTCEECCCC-------------CHHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH---cCCeEEeccccccccccchhhhhHHHHhhh
Confidence            47999995 999999999999999999999998     666644443   3555554321                  12


Q ss_pred             HHHHHHHHccCCEEEEcCcCCC----chhHHHHHHHHH
Q 039623           64 HESLIKAIKQVDVVISTVSRGQ----IPEQAKIIAAVK   97 (292)
Q Consensus        64 ~~~~~~~~~~~d~vi~~a~~~~----~~~~~~l~~a~~   97 (292)
                      .+.+.++++++|+||.++....    ...+...++.++
T Consensus       256 ~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mk  293 (381)
T 3p2y_A          256 QQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQ  293 (381)
T ss_dssp             HHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred             HHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCC
Confidence            4567788889999999874432    223555555554

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.12  E-value=0.00037  Score=59.81  Aligned_cols=86  Identities=14%  Similarity=0.093  Sum_probs=56.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-----cCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-----NLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+|.|+| +|.+|..++..|.+.|++|++.+|+     +++.+.+....     .+++.+ ...+.-.+++.++++++|+
T Consensus        30 mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~-----~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDv  102 (356)
T 3k96_A           30 HPIAILG-AGSWGTALALVLARKGQKVRLWSYE-----SDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTD  102 (356)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSC-----HHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCE
T ss_pred             CeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCE
Confidence            6899999 5999999999999999999999998     66655444321     112211 1111101234567889999


Q ss_pred             EEEcCcCCCchhHHHHHHHHH
Q 039623           77 VISTVSRGQIPEQAKIIAAVK   97 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~   97 (292)
                      ||.+...   .....+++...
T Consensus       103 VilaVp~---~~~~~vl~~i~  120 (356)
T 3k96_A          103 ILIVVPS---FAFHEVITRMK  120 (356)
T ss_dssp             EEECCCH---HHHHHHHHHHG
T ss_pred             EEECCCH---HHHHHHHHHHH
Confidence            9988763   34444555443

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.12  E-value=0.0011  Score=56.64  Aligned_cols=72  Identities=18%  Similarity=0.289  Sum_probs=51.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-HHHHHHHHc--cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-HESLIKAIK--QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~--~~d~vi   78 (292)
                      .+|||+||+|.+|...++.+...|.+|+++ ++     +++.+.++.+   +...+. +-.+ .+.+.++..  ++|+||
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~-----~~~~~~~~~l---Ga~~i~-~~~~~~~~~~~~~~~~g~D~vi  221 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-AR-----GSDLEYVRDL---GATPID-ASREPEDYAAEHTAGQGFDLVY  221 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC-----HHHHHHHHHH---TSEEEE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC-----HHHHHHHHHc---CCCEec-cCCCHHHHHHHHhcCCCceEEE
Confidence            379999999999999999999999999998 66     6666554443   444433 3223 233444443  699999


Q ss_pred             EcCcC
Q 039623           79 STVSR   83 (292)
Q Consensus        79 ~~a~~   83 (292)
                      +++|.
T Consensus       222 d~~g~  226 (343)
T 3gaz_A          222 DTLGG  226 (343)
T ss_dssp             ESSCT
T ss_pred             ECCCc
Confidence            99984

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.11  E-value=0.014  Score=48.32  Aligned_cols=85  Identities=25%  Similarity=0.257  Sum_probs=57.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      ++|+|.|+||..|+.+++.|.+.|+++.+.... ...   ..+      ..++.++ -      ++.++.+  ++|+++.
T Consensus         8 ~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP-~~~---g~~------i~G~~vy-~------sl~el~~~~~~Dv~Ii   70 (288)
T 1oi7_A            8 TRVLVQGITGREGQFHTKQMLTYGTKIVAGVTP-GKG---GME------VLGVPVY-D------TVKEAVAHHEVDASII   70 (288)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT-TCT---TCE------ETTEEEE-S------SHHHHHHHSCCSEEEE
T ss_pred             CEEEEECCCCCHHHHHHHHHHHcCCeEEEEECC-CCC---Cce------ECCEEee-C------CHHHHhhcCCCCEEEE
Confidence            579999999999999999999989985533322 100   000      1233322 1      2444555  8999998


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +.+   -..+..+++.|.+.| ++.++.
T Consensus        71 ~vp---~~~~~~~~~ea~~~G-i~~vVi   94 (288)
T 1oi7_A           71 FVP---APAAADAALEAAHAG-IPLIVL   94 (288)
T ss_dssp             CCC---HHHHHHHHHHHHHTT-CSEEEE
T ss_pred             ecC---HHHHHHHHHHHHHCC-CCEEEE
Confidence            766   356788888888898 885553

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.09  E-value=9.9e-05  Score=61.38  Aligned_cols=83  Identities=20%  Similarity=0.238  Sum_probs=55.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--------cC--------------CcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--------NL--------------GVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--------~~--------------~v~~v~~   59 (292)
                      ++|.|+| +|.+|+.+++.|.+.|++|++.+|+     +++.+......        ..              ++.. . 
T Consensus         5 ~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~-----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~-   76 (283)
T 4e12_A            5 TNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDIN-----TDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-S-   76 (283)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-E-
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-e-
Confidence            5799999 5999999999999999999999998     55543332210        00              1111 1 


Q ss_pred             CCCCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHH
Q 039623           60 DLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        60 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                           +++.++++++|+||.++.... .....+++...+
T Consensus        77 -----~~~~~~~~~aDlVi~av~~~~-~~~~~v~~~l~~  109 (283)
T 4e12_A           77 -----DDLAQAVKDADLVIEAVPESL-DLKRDIYTKLGE  109 (283)
T ss_dssp             -----SCHHHHTTTCSEEEECCCSCH-HHHHHHHHHHHH
T ss_pred             -----CCHHHHhccCCEEEEeccCcH-HHHHHHHHHHHh
Confidence                 234456789999999987652 333444444433

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.09  E-value=0.00082  Score=57.28  Aligned_cols=72  Identities=17%  Similarity=0.151  Sum_probs=52.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~~~d~vi   78 (292)
                      ++|||+|| |.+|..+++.+...|.+|++++|+     +++.+.++.   .+.+.+ .|..+.   +.+.++..++|+||
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~---lGa~~~-~d~~~~~~~~~~~~~~~~~d~vi  235 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG-----DEKLELAKE---LGADLV-VNPLKEDAAKFMKEKVGGVHAAV  235 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---TTCSEE-ECTTTSCHHHHHHHHHSSEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---CCCCEE-ecCCCccHHHHHHHHhCCCCEEE
Confidence            47999999 679999999999999999999998     666655443   344332 355442   33434345799999


Q ss_pred             EcCcC
Q 039623           79 STVSR   83 (292)
Q Consensus        79 ~~a~~   83 (292)
                      +++|.
T Consensus       236 d~~g~  240 (339)
T 1rjw_A          236 VTAVS  240 (339)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99985

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.09  E-value=0.00036  Score=59.23  Aligned_cols=91  Identities=21%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC-CCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA-SDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |||.|.||+|++|+.+++.|.+++|++..+..-.+. ....+..    +....+.+...|   ++   . + ++|+||.|
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~----~~g~~i~v~~~~---~~---~-~-~~DvV~~a   68 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA----FRGEEIPVEPLP---EG---P-L-PVDLVLAS   68 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE----ETTEEEEEEECC---SS---C-C-CCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE----EcCceEEEEeCC---hh---h-c-CCCEEEEC
Confidence            589999999999999999999777654322211000 0011110    111123333333   22   2 3 89999999


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      .|..   .+...+....+.| ++.+-.|
T Consensus        69 ~g~~---~s~~~a~~~~~~G-~~vId~s   92 (331)
T 2yv3_A           69 AGGG---ISRAKALVWAEGG-ALVVDNS   92 (331)
T ss_dssp             SHHH---HHHHHHHHHHHTT-CEEEECS
T ss_pred             CCcc---chHHHHHHHHHCC-CEEEECC
Confidence            8843   4556666667778 6544433

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.09  E-value=0.0029  Score=53.39  Aligned_cols=87  Identities=16%  Similarity=0.120  Sum_probs=59.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhh-Hhhhh------cCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKL-IEIFK------NLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~------~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||.|+| +|.+|..++..|...|. +|.+++++     +++.+. ..++.      .....+...+  |.    +++++
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~-----~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~~   73 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIA-----QGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLEN   73 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSS-----SSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGTT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCC-----hHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHCC
Confidence            6899999 59999999999999887 89999998     554321 11121      1233333211  22    46889


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+||.++|...             ....+.+++.+.+..
T Consensus        74 aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~  113 (321)
T 3p7m_A           74 SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC  113 (321)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC
Confidence            999999998764             345666677777765

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.08  E-value=0.0038  Score=55.47  Aligned_cols=95  Identities=22%  Similarity=0.264  Sum_probs=72.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|.| .|.+|.++++.|. ++++|.++.++     .++.+.+.... ++..++.||.+|.+-+.+. +..+|+++-+
T Consensus       236 ~~v~I~G-gG~ig~~lA~~L~-~~~~v~iIE~d-----~~r~~~la~~l-~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~  307 (461)
T 4g65_A          236 RRIMIVG-GGNIGASLAKRLE-QTYSVKLIERN-----LQRAEKLSEEL-ENTIVFCGDAADQELLTEENIDQVDVFIAL  307 (461)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHT-TTSEEEEEESC-----HHHHHHHHHHC-TTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred             cEEEEEc-chHHHHHHHHHhh-hcCceEEEecC-----HHHHHHHHHHC-CCceEEeccccchhhHhhcCchhhcEEEEc
Confidence            5799999 5999999999874 56999999988     77776655543 5788999999999988775 5689999987


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .+..  ..-....-.|++.| +++.+.
T Consensus       308 T~~D--e~Ni~~~llAk~~g-v~kvIa  331 (461)
T 4g65_A          308 TNED--ETNIMSAMLAKRMG-AKKVMV  331 (461)
T ss_dssp             CSCH--HHHHHHHHHHHHTT-CSEEEE
T ss_pred             ccCc--HHHHHHHHHHHHcC-Cccccc
Confidence            7654  23333344467788 888874

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.07  E-value=0.0019  Score=55.74  Aligned_cols=96  Identities=21%  Similarity=0.188  Sum_probs=55.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhh--------cCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFK--------NLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||.|.||||++|..|++.|.++. .++..+.-+++.. ..+....-.+.        .....+...|..+      .++
T Consensus        20 ~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~sa-Gk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~------~~~   92 (381)
T 3hsk_A           20 KKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSA-GKKYKDAASWKQTETLPETEQDIVVQECKPEG------NFL   92 (381)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTT-TSBHHHHCCCCCSSCCCHHHHTCBCEESSSCT------TGG
T ss_pred             cEEEEECCCChHHHHHHHHHHcCCCceEEEeecccccc-CCCHHHhcccccccccccccccceEEeCchhh------hcc
Confidence            479999999999999999888775 4676553221110 11221110000        0122232233210      246


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      ++|+||.|.+.   ..+..+...+.+.| ++.+-.|
T Consensus        93 ~~Dvvf~alp~---~~s~~~~~~~~~~G-~~VIDlS  124 (381)
T 3hsk_A           93 ECDVVFSGLDA---DVAGDIEKSFVEAG-LAVVSNA  124 (381)
T ss_dssp             GCSEEEECCCH---HHHHHHHHHHHHTT-CEEEECC
T ss_pred             cCCEEEECCCh---hHHHHHHHHHHhCC-CEEEEcC
Confidence            89999999874   34666777777778 6655444

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.07  E-value=0.00049  Score=55.85  Aligned_cols=71  Identities=14%  Similarity=0.239  Sum_probs=49.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc--hhh---------Hhhhhc-CCcEEEECCCCCHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVK--GKL---------IEIFKN-LGVNVLYGDLQDHESLIK   69 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~---------~~~~~~-~~v~~v~~D~~d~~~~~~   69 (292)
                      |+|.|+| +|.+|+.+++.|.+.|++|++.+|+     +++  .+.         .+.+.. .+...       ..+..+
T Consensus        20 ~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~e   86 (245)
T 3dtt_A           20 MKIAVLG-TGTVGRTMAGALADLGHEVTIGTRD-----PKATLARAEPDAMGAPPFSQWLPEHPHVH-------LAAFAD   86 (245)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHTCC-------CCHHHHGGGSTTCE-------EEEHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC-----hhhhhhhhhhhhhcchhhhHHHhhcCcee-------ccCHHH
Confidence            7899998 8999999999999999999999998     443  000         111111 11111       123445


Q ss_pred             HHccCCEEEEcCcCCC
Q 039623           70 AIKQVDVVISTVSRGQ   85 (292)
Q Consensus        70 ~~~~~d~vi~~a~~~~   85 (292)
                      +++++|+||.+.....
T Consensus        87 ~~~~aDvVilavp~~~  102 (245)
T 3dtt_A           87 VAAGAELVVNATEGAS  102 (245)
T ss_dssp             HHHHCSEEEECSCGGG
T ss_pred             HHhcCCEEEEccCcHH
Confidence            6778999999988665

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.07  E-value=0.0011  Score=55.55  Aligned_cols=69  Identities=19%  Similarity=0.283  Sum_probs=52.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| .|.+|+.+++.|...|.+|++.+|+     +++.+.+.   ..+++.+.     .+++.++++++|+|+.+.
T Consensus       158 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~-----~~~~~~~~---~~g~~~~~-----~~~l~~~l~~aDvVi~~~  223 (300)
T 2rir_A          158 SQVAVLG-LGRTGMTIARTFAALGANVKVGARS-----SAHLARIT---EMGLVPFH-----TDELKEHVKDIDICINTI  223 (300)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHH---HTTCEEEE-----GGGHHHHSTTCSEEEECC
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HCCCeEEc-----hhhHHHHhhCCCEEEECC
Confidence            5899999 5999999999999999999999998     54443222   23444332     234677888999999998


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       224 p~~  226 (300)
T 2rir_A          224 PSM  226 (300)
T ss_dssp             SSC
T ss_pred             Chh
Confidence            864

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=97.07  E-value=0.003  Score=53.29  Aligned_cols=65  Identities=26%  Similarity=0.423  Sum_probs=47.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|.|.| .|.||+.+++.|...|++|.+.+|++...     .        .....    ...+++.++++.+|+|+.+.
T Consensus       141 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~--------~~~~~----~~~~~l~ell~~aDvV~l~l  202 (324)
T 3hg7_A          141 RTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRER-----A--------GFDQV----YQLPALNKMLAQADVIVSVL  202 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCC-----T--------TCSEE----ECGGGHHHHHHTCSEEEECC
T ss_pred             ceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHh-----h--------hhhcc----cccCCHHHHHhhCCEEEEeC
Confidence            5899999 89999999999999999999999984321     0        00001    12345667788888888776


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       203 Plt  205 (324)
T 3hg7_A          203 PAT  205 (324)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            644

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.06  E-value=0.00094  Score=56.28  Aligned_cols=66  Identities=21%  Similarity=0.296  Sum_probs=48.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|+| .|.+|+.+++.|.+.|++|.+.+|+     +++.+.+..   .++.. .   .+   ..++++++|+||.+.
T Consensus        31 ~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~~~~~~---~g~~~-~---~~---~~~~~~~~DvVi~av   94 (316)
T 2uyy_A           31 KKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRT-----AEKCDLFIQ---EGARL-G---RT---PAEVVSTCDITFACV   94 (316)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----GGGGHHHHH---TTCEE-C---SC---HHHHHHHCSEEEECC
T ss_pred             CeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHH---cCCEE-c---CC---HHHHHhcCCEEEEeC
Confidence            6899999 6999999999999999999999998     555544332   34432 1   12   335567889999887


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      ..
T Consensus        95 ~~   96 (316)
T 2uyy_A           95 SD   96 (316)
T ss_dssp             SS
T ss_pred             CC
Confidence            63

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=97.06  E-value=0.0056  Score=51.64  Aligned_cols=34  Identities=24%  Similarity=0.360  Sum_probs=31.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|.|.| .|.||+.+++.|...|++|.+.+|+..
T Consensus       138 ktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~  171 (324)
T 3evt_A          138 QQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGH  171 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence            5799999 799999999999999999999999854

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.05  E-value=0.00078  Score=56.87  Aligned_cols=86  Identities=13%  Similarity=0.125  Sum_probs=55.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh-Hhhhhc-----CCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL-IEIFKN-----LGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~~~~-----~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||.|+|+ |++|..++-.|...|.  +|.+++++     .++.+. ..++.+     .++++. .  .+    .+.+++
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~   74 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVF-----KEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKD   74 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC--------CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----hHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCC
Confidence            58999997 9999999999999986  89999998     333321 122211     122222 1  12    345889


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+||.+++...             +...+.+++.+.+..
T Consensus        75 aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~  114 (318)
T 1y6j_A           75 CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY  114 (318)
T ss_dssp             CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC
Confidence            999999999765             233567777777765

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*

Probab=97.05  E-value=0.0035  Score=53.95  Aligned_cols=34  Identities=24%  Similarity=0.318  Sum_probs=28.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~   34 (292)
                      |++|.|+|+||.||+.+++.+.++.  ++|.++...
T Consensus         4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag   39 (388)
T 1r0k_A            4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   39 (388)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC
Confidence            4689999999999999999998863  778877443

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.05  E-value=0.0048  Score=51.15  Aligned_cols=100  Identities=22%  Similarity=0.201  Sum_probs=65.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC-------------CCcchhhHhh-h--hcC--CcEEEECCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS-------------DPVKGKLIEI-F--KNL--GVNVLYGDLQ   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------~~~~~~~~~~-~--~~~--~v~~v~~D~~   62 (292)
                      ++|+|.| .|.+|+.+++.|...|. ++++++++.-..             -..|.+.... +  .++  .++.+..+++
T Consensus        37 ~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~  115 (292)
T 3h8v_A           37 FAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT  115 (292)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCC
Confidence            4799999 58899999999999994 677777653110             0123322222 1  133  3566666777


Q ss_pred             CHHHHHHHH-----------ccCCEEEEcCcCCCchhHHHHHHHHHHhCCccee
Q 039623           63 DHESLIKAI-----------KQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRF  105 (292)
Q Consensus        63 d~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~  105 (292)
                      +.+.+...+           +++|+||.+.-..  ..-..+-++|.+.+ ++.+
T Consensus       116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~--~~R~~in~~c~~~~-~Pli  166 (292)
T 3h8v_A          116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF--EARMTINTACNELG-QTWM  166 (292)
T ss_dssp             SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH--HHHHHHHHHHHHHT-CCEE
T ss_pred             cHHHHHHHhhhhcccccccCCCCCEEEECCcch--hhhhHHHHHHHHhC-CCEE
Confidence            666666654           5899999877543  44466778898888 6554

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.05  E-value=0.00046  Score=59.52  Aligned_cols=71  Identities=21%  Similarity=0.281  Sum_probs=51.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCC---cchhhHhhhhcCCcEEEECCCCC--HHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDP---VKGKLIEIFKNLGVNVLYGDLQD--HESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~v~~v~~D~~d--~~~~~~~~~~~d~   76 (292)
                      .+|||+|| |.+|..+++.+...|.+|++++++     +   ++.+.++.   .+.+.+  | .+  .+.+.+.-.++|+
T Consensus       182 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~~~~---~ga~~v--~-~~~~~~~~~~~~~~~d~  249 (366)
T 2cdc_A          182 RKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRR-----EPTEVEQTVIEE---TKTNYY--N-SSNGYDKLKDSVGKFDV  249 (366)
T ss_dssp             CEEEEESC-HHHHHHHHHHHHHHTCEEEEEESS-----CCCHHHHHHHHH---HTCEEE--E-CTTCSHHHHHHHCCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----ccchHHHHHHHH---hCCcee--c-hHHHHHHHHHhCCCCCE
Confidence            36999999 999999999999999999999998     5   55544443   355555  4 43  2233331147999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      ||+++|..
T Consensus       250 vid~~g~~  257 (366)
T 2cdc_A          250 IIDATGAD  257 (366)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCh
Confidence            99999864

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.0019  Score=55.91  Aligned_cols=87  Identities=17%  Similarity=0.265  Sum_probs=61.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECC----------------CCC--
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGD----------------LQD--   63 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D----------------~~d--   63 (292)
                      .+|+|+|+ |-+|...++.+...|.+|++++++     +++.+.++.   .+.+++..+                +++  
T Consensus       191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~~---~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~  261 (405)
T 4dio_A          191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVR-----PAAKEQVAS---LGAKFIAVEDEEFKAAETAGGYAKEMSGEY  261 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----TTHHHHHHH---TTCEECCCCC-----------------CHH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHH---cCCceeecccccccccccccchhhhcchhh
Confidence            47999995 999999999999999999999998     655544443   344444332                222  


Q ss_pred             ----HHHHHHHHccCCEEEEcCcCCC----chhHHHHHHHHH
Q 039623           64 ----HESLIKAIKQVDVVISTVSRGQ----IPEQAKIIAAVK   97 (292)
Q Consensus        64 ----~~~~~~~~~~~d~vi~~a~~~~----~~~~~~l~~a~~   97 (292)
                          .+.+.++++++|+||.++....    ...+...++.++
T Consensus       262 ~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk  303 (405)
T 4dio_A          262 QVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMK  303 (405)
T ss_dssp             HHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSC
T ss_pred             hhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCC
Confidence                3578888899999999975443    233555566554

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.05  E-value=0.0025  Score=58.24  Aligned_cols=90  Identities=21%  Similarity=0.208  Sum_probs=69.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      ++|+|.|+ |.+|+++++.|.+.|++|.+++++     +++.+.+       ..++.+|.+|++.+.++ ++++|.+|-+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d-----~~~~~~~-------~~~i~gD~t~~~~L~~agi~~ad~vi~~  415 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQ-----ESPVCND-------HVVVYGDATVGQTLRQAGIDRASGIIVT  415 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESS-----CCSSCCS-------SCEEESCSSSSTHHHHHTTTSCSEEEEC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECC-----hHHHhhc-------CCEEEeCCCCHHHHHhcCccccCEEEEE
Confidence            46899995 999999999999999999999998     4443221       27999999999988776 4589999988


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcc-eeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVK-RFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~-~~i~  107 (292)
                      .+..  .....+...+++.+ .+ +++.
T Consensus       416 ~~~d--~~ni~~~~~ak~l~-~~~~iia  440 (565)
T 4gx0_A          416 TNDD--STNIFLTLACRHLH-SHIRIVA  440 (565)
T ss_dssp             CSCH--HHHHHHHHHHHHHC-SSSEEEE
T ss_pred             CCCc--hHHHHHHHHHHHHC-CCCEEEE
Confidence            7754  45555666777777 44 5553

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=97.04  E-value=0.0011  Score=54.85  Aligned_cols=78  Identities=18%  Similarity=0.261  Sum_probs=53.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECCCCCHHHHHHHHc-cCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQDHESLIKAIK-QVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d~~~~~~~~~-~~d~   76 (292)
                      ||+|.|+| .|.+|+.+++.|.+.|+  +|++.+|+     +++.+.+.   ..++. ....   |   +.++++ ++|+
T Consensus         1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~-----~~~~~~~~---~~g~~~~~~~---~---~~~~~~~~aDv   65 (281)
T 2g5c_A            1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISKAV---DLGIIDEGTT---S---IAKVEDFSPDF   65 (281)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHH---HTTSCSEEES---C---GGGGGGTCCSE
T ss_pred             CcEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCC-----HHHHHHHH---HCCCcccccC---C---HHHHhcCCCCE
Confidence            88999999 79999999999999998  89999887     55554332   22332 1112   2   224667 8999


Q ss_pred             EEEcCcCCCchhHHHHHHHH
Q 039623           77 VISTVSRGQIPEQAKIIAAV   96 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~   96 (292)
                      ||.+.+..   ....+++..
T Consensus        66 Vilavp~~---~~~~v~~~l   82 (281)
T 2g5c_A           66 VMLSSPVR---TFREIAKKL   82 (281)
T ss_dssp             EEECSCHH---HHHHHHHHH
T ss_pred             EEEcCCHH---HHHHHHHHH
Confidence            99988754   333444443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.04  E-value=0.0035  Score=53.50  Aligned_cols=67  Identities=21%  Similarity=0.271  Sum_probs=46.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|.|.| .|.||+.+++.|...|++|.+.+|++.     +.+...   ..++..+       +++.++++.+|+|+.+.
T Consensus       165 ktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~-----~~~~~~---~~g~~~~-------~~l~ell~~aDvV~l~~  228 (351)
T 3jtm_A          165 KTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQM-----APELEK---ETGAKFV-------EDLNEMLPKCDVIVINM  228 (351)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCC-----CHHHHH---HHCCEEC-------SCHHHHGGGCSEEEECS
T ss_pred             CEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCcc-----CHHHHH---hCCCeEc-------CCHHHHHhcCCEEEECC
Confidence            5899999 799999999999999999999998732     221111   1233221       23556677777777776


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       229 Plt  231 (351)
T 3jtm_A          229 PLT  231 (351)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            643

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.03  E-value=0.00048  Score=60.44  Aligned_cols=77  Identities=19%  Similarity=0.176  Sum_probs=50.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC----CcE-EE---ECCCCCHHHHHHHHc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL----GVN-VL---YGDLQDHESLIKAIK   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----~v~-~v---~~D~~d~~~~~~~~~   72 (292)
                      ||+|.|+| +|++|..++..|.+ |++|++++|+     +++.+.+..-..+    +++ .+   .+.+.-..++.++++
T Consensus        36 ~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~-----~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~  108 (432)
T 3pid_A           36 FMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIV-----QAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR  108 (432)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSC-----HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecC-----HHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence            57999999 79999999998887 9999999998     6666544331000    000 00   001110112446678


Q ss_pred             cCCEEEEcCcCC
Q 039623           73 QVDVVISTVSRG   84 (292)
Q Consensus        73 ~~d~vi~~a~~~   84 (292)
                      ++|+||-+.+..
T Consensus       109 ~aDvViiaVPt~  120 (432)
T 3pid_A          109 NADYVIIATPTD  120 (432)
T ss_dssp             TCSEEEECCCCE
T ss_pred             CCCEEEEeCCCc
Confidence            899999887754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.02  E-value=0.0013  Score=54.90  Aligned_cols=69  Identities=20%  Similarity=0.273  Sum_probs=52.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| .|.+|+.+++.|...|.+|++.+|+     +++.+.+.   ..+++.+     +.+++.++++++|+|+.++
T Consensus       156 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~---~~g~~~~-----~~~~l~~~l~~aDvVi~~~  221 (293)
T 3d4o_A          156 ANVAVLG-LGRVGMSVARKFAALGAKVKVGARE-----SDLLARIA---EMGMEPF-----HISKAAQELRDVDVCINTI  221 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHH---HTTSEEE-----EGGGHHHHTTTCSEEEECC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHH---HCCCeec-----ChhhHHHHhcCCCEEEECC
Confidence            5899999 6999999999999999999999998     54433222   2355443     2235667888999999998


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       222 p~~  224 (293)
T 3d4o_A          222 PAL  224 (293)
T ss_dssp             SSC
T ss_pred             ChH
Confidence            754

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.02  E-value=0.0022  Score=54.52  Aligned_cols=82  Identities=23%  Similarity=0.327  Sum_probs=56.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH-HHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH-ESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~-~~~~~~~~~~d~vi~~   80 (292)
                      ++|.|+| .|.+|..+++.|.+.|++|++.+|+     +++.+...   ..++.. .   .+. +.+..+..++|+||.+
T Consensus         9 ~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~-----~~~~~~a~---~~G~~~-~---~~~~e~~~~a~~~aDlVila   75 (341)
T 3ktd_A            9 RPVCILG-LGLIGGSLLRDLHAANHSVFGYNRS-----RSGAKSAV---DEGFDV-S---ADLEATLQRAAAEDALIVLA   75 (341)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSC-----HHHHHHHH---HTTCCE-E---SCHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH---HcCCee-e---CCHHHHHHhcccCCCEEEEe
Confidence            6899999 7999999999999999999999998     55553332   345432 1   233 3334445578999998


Q ss_pred             CcCCCchhHHHHHHHHHHh
Q 039623           81 VSRGQIPEQAKIIAAVKEA   99 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~   99 (292)
                      .+.   .....+++.....
T Consensus        76 vP~---~~~~~vl~~l~~~   91 (341)
T 3ktd_A           76 VPM---TAIDSLLDAVHTH   91 (341)
T ss_dssp             SCH---HHHHHHHHHHHHH
T ss_pred             CCH---HHHHHHHHHHHcc
Confidence            884   3344455544433

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.01  E-value=0.0026  Score=53.48  Aligned_cols=87  Identities=14%  Similarity=0.129  Sum_probs=57.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchh----hHhhh---hcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGK----LIEIF---KNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~----~~~~~---~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |||.|+|+ |.+|..++..|...|.  ++.+++++     +++.+    .+++.   ...+..+...|  +    .+.++
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~-----~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~   68 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIK-----DGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTE   68 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSS-----TTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCc-----hHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhC
Confidence            78999996 9999999999999885  89999998     44432    12221   12234444222  2    24678


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.++|...             ....+.+.+.+.+.+
T Consensus        69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~  109 (314)
T 3nep_X           69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS  109 (314)
T ss_dssp             TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC
Confidence            9999999999764             344556666666654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.00  E-value=0.00088  Score=58.57  Aligned_cols=71  Identities=21%  Similarity=0.348  Sum_probs=52.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+|+ |.+|+.+++.|...|. +|++.+|+     +++.+.+...  .+.+.  .+.   +++.+++.++|+||.+
T Consensus       168 ~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~-----~~ra~~la~~--~g~~~--~~~---~~l~~~l~~aDvVi~a  234 (404)
T 1gpj_A          168 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELARD--LGGEA--VRF---DELVDHLARSDVVVSA  234 (404)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHHHH--HTCEE--CCG---GGHHHHHHTCSEEEEC
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHH--cCCce--ecH---HhHHHHhcCCCEEEEc
Confidence            57999996 9999999999999998 89999998     6555322221  13332  232   3466677899999999


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      .+...
T Consensus       235 t~~~~  239 (404)
T 1gpj_A          235 TAAPH  239 (404)
T ss_dssp             CSSSS
T ss_pred             cCCCC
Confidence            88665

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.00  E-value=0.0011  Score=54.88  Aligned_cols=65  Identities=18%  Similarity=0.299  Sum_probs=47.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++++|+|+ |..|+.++..|.+.|. +|+++.|+     .++.+.+..    .+..+     +.+++.+ + ++|+||++
T Consensus       123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt-----~~ka~~La~----~~~~~-----~~~~l~~-l-~~DivIna  185 (282)
T 3fbt_A          123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRN-----PEKTSEIYG----EFKVI-----SYDELSN-L-KGDVIINC  185 (282)
T ss_dssp             SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHCT----TSEEE-----EHHHHTT-C-CCSEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHH----hcCcc-----cHHHHHh-c-cCCEEEEC
Confidence            57999995 7899999999999997 89999998     666644432    22222     2233444 4 89999998


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      .+.
T Consensus       186 Tp~  188 (282)
T 3fbt_A          186 TPK  188 (282)
T ss_dssp             SST
T ss_pred             Ccc
Confidence            754

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.99  E-value=0.0022  Score=55.48  Aligned_cols=67  Identities=21%  Similarity=0.305  Sum_probs=53.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|+|+| .|.+|+.+++.+.+.|++|++++.++...  ..        ...-..+..|..|.+.+.++.+.+|+|..
T Consensus        13 ~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p--~~--------~~ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           13 ATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCP--CR--------YVAHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCT--TG--------GGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCCh--hh--------hhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence            5799999 68999999999999999999998764321  11        11235778999999999999989998854

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.99  E-value=0.00028  Score=58.76  Aligned_cols=73  Identities=14%  Similarity=0.066  Sum_probs=48.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC----CcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL----GVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ++++|+|+ |.+|+.++..|.+.| +|++.+|+     .++.+.+......    .. .+..|+.+.   .+.+.++|+|
T Consensus       129 k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~-----~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~Dil  197 (287)
T 1nvt_A          129 KNIVIYGA-GGAARAVAFELAKDN-NIIIANRT-----VEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDII  197 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTSSS-EEEEECSS-----HHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEE
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCC-CEEEEECC-----HHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEE
Confidence            57999997 589999999999999 99999998     5555443322111    10 011222221   2345679999


Q ss_pred             EEcCcCCC
Q 039623           78 ISTVSRGQ   85 (292)
Q Consensus        78 i~~a~~~~   85 (292)
                      |++++...
T Consensus       198 Vn~ag~~~  205 (287)
T 1nvt_A          198 INATPIGM  205 (287)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99998653

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.99  E-value=0.0018  Score=55.34  Aligned_cols=73  Identities=16%  Similarity=0.202  Sum_probs=52.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-C-HHHHHHHHc-cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-D-HESLIKAIK-QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-d-~~~~~~~~~-~~d~vi   78 (292)
                      .+|||+||+|.+|...++.+...|.+|++++++     +++.+.++.+   +.+.+. |.. + .+.+.++-. ++|+||
T Consensus       152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~vi-~~~~~~~~~~~~~~~~g~Dvv~  222 (346)
T 3fbg_A          152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASR-----NETIEWTKKM---GADIVL-NHKESLLNQFKTQGIELVDYVF  222 (346)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS-----HHHHHHHHHH---TCSEEE-CTTSCHHHHHHHHTCCCEEEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCcEEE-ECCccHHHHHHHhCCCCccEEE
Confidence            369999999999999999999999999999987     6676655553   333222 222 2 233444321 599999


Q ss_pred             EcCcC
Q 039623           79 STVSR   83 (292)
Q Consensus        79 ~~a~~   83 (292)
                      +++|.
T Consensus       223 d~~g~  227 (346)
T 3fbg_A          223 CTFNT  227 (346)
T ss_dssp             ESSCH
T ss_pred             ECCCc
Confidence            99884

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.99  E-value=0.0013  Score=48.31  Aligned_cols=82  Identities=20%  Similarity=0.280  Sum_probs=56.1

Q ss_pred             ceEEEEccC---CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGT---GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++|+|.|+|   |.+|..+++.|.+.|++|+.+.++.     ++.        .++.. ..+      +.++.+.+|+++
T Consensus        15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~-----~~i--------~G~~~-~~s------~~el~~~vDlvi   74 (138)
T 1y81_A           15 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY-----DEI--------EGLKC-YRS------VRELPKDVDVIV   74 (138)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-----SEE--------TTEEC-BSS------GGGSCTTCCEEE
T ss_pred             CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC-----CeE--------CCeee-cCC------HHHhCCCCCEEE
Confidence            579999987   8999999999999999877765541     111        12221 122      223344789999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      -+.+.   .....+++.|.+.+ ++.++.
T Consensus        75 i~vp~---~~v~~v~~~~~~~g-~~~i~~   99 (138)
T 1y81_A           75 FVVPP---KVGLQVAKEAVEAG-FKKLWF   99 (138)
T ss_dssp             ECSCH---HHHHHHHHHHHHTT-CCEEEE
T ss_pred             EEeCH---HHHHHHHHHHHHcC-CCEEEE
Confidence            88772   56666777777788 777664

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.99  E-value=0.00035  Score=59.38  Aligned_cols=77  Identities=22%  Similarity=0.198  Sum_probs=51.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEec--CCCCCCCcchhhHhhhhc-C--CcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVR--ESTASDPVKGKLIEIFKN-L--GVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~~~~~~~-~--~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+|.|+| .|.+|+.++..|.+.|++|++++|  +     +++.+.+..... .  +++.......+.+++.++++++|+
T Consensus         1 m~I~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~   74 (335)
T 1txg_A            1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD-----TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV   74 (335)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG-----HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEEccCC-----HHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCE
Confidence            5899999 599999999999999999999999  6     555443322100 0  111000011222245567789999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      ||.+....
T Consensus        75 vi~~v~~~   82 (335)
T 1txg_A           75 VLLGVSTD   82 (335)
T ss_dssp             EEECSCGG
T ss_pred             EEEcCChH
Confidence            99998765

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=96.98  E-value=0.0013  Score=56.04  Aligned_cols=75  Identities=24%  Similarity=0.259  Sum_probs=45.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |.||.|.||||++|+.|++.|.++. .++..+.-.++.  ..+...+ ..+. ..+.+  -++ |++.+   +.++|+||
T Consensus        13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~a--G~~~~~~~p~~~-~~l~~--~~~-~~~~~---~~~~Dvvf   83 (351)
T 1vkn_A           13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYA--GKKLEEIFPSTL-ENSIL--SEF-DPEKV---SKNCDVLF   83 (351)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT--TSBHHHHCGGGC-CCCBC--BCC-CHHHH---HHHCSEEE
T ss_pred             eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc--cCChHHhChhhc-cCceE--EeC-CHHHh---hcCCCEEE
Confidence            6789999999999999999999986 466666533221  2222111 1111 11111  122 34333   46799999


Q ss_pred             EcCcCC
Q 039623           79 STVSRG   84 (292)
Q Consensus        79 ~~a~~~   84 (292)
                      .+++..
T Consensus        84 ~alp~~   89 (351)
T 1vkn_A           84 TALPAG   89 (351)
T ss_dssp             ECCSTT
T ss_pred             ECCCcH
Confidence            998854

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.98  E-value=0.001  Score=58.99  Aligned_cols=74  Identities=19%  Similarity=0.328  Sum_probs=52.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEE----CCCCC--------------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLY----GDLQD--------------   63 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~----~D~~d--------------   63 (292)
                      .+|||+||+|.+|...++.+...|.+|++++++     +++.+.++.+   +...+.    .|+.+              
T Consensus       222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~-----~~~~~~~~~l---Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS-----AQKEAAVRAL---GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCCEEEecccccccccccccccccchhhh
Confidence            479999999999999999999999999999987     6777655443   332211    12211              


Q ss_pred             --HHHHHHHHc-cCCEEEEcCcC
Q 039623           64 --HESLIKAIK-QVDVVISTVSR   83 (292)
Q Consensus        64 --~~~~~~~~~-~~d~vi~~a~~   83 (292)
                        .+.+.++.. ++|+||+++|.
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHHhCCCceEEEECCCc
Confidence              233444443 59999999995

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.97  E-value=0.0034  Score=52.95  Aligned_cols=86  Identities=16%  Similarity=0.198  Sum_probs=58.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh-Hhhhhc-----CCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL-IEIFKN-----LGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~~~~-----~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      +||.|+|| |.+|..++-.|...+.  ++..++++     .++.+. ..++.+     .++++.. |  +    .+++++
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~   72 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVV-----KDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKD   72 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCC
Confidence            68999997 9999999999988875  78999987     555432 122211     2344443 2  2    245889


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+||.+++...             +...+.+.+.+.+.+
T Consensus        73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~  112 (318)
T 1ez4_A           73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG  112 (318)
T ss_dssp             CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999998765             345666667777665

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.97  E-value=0.0018  Score=56.02  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=49.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH--ccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI--KQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~--~~~d~vi~   79 (292)
                      .+|||+||+|.+|...++.+...|.+|++++ +     +++.+.++.   .+.+.+ .|..+.+....+.  .++|+||+
T Consensus       185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~-----~~~~~~~~~---lGa~~v-~~~~~~~~~~~~~~~~g~D~vid  254 (375)
T 2vn8_A          185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVC-S-----QDASELVRK---LGADDV-IDYKSGSVEEQLKSLKPFDFILD  254 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-C-----GGGHHHHHH---TTCSEE-EETTSSCHHHHHHTSCCBSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-C-----hHHHHHHHH---cCCCEE-EECCchHHHHHHhhcCCCCEEEE
Confidence            3799999999999999999999999998887 3     445544433   344332 2343333222232  37999999


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      ++|..
T Consensus       255 ~~g~~  259 (375)
T 2vn8_A          255 NVGGS  259 (375)
T ss_dssp             SSCTT
T ss_pred             CCCCh
Confidence            99854

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.0011  Score=56.20  Aligned_cols=72  Identities=17%  Similarity=0.223  Sum_probs=49.1

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH--HHHHHHH-ccCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH--ESLIKAI-KQVDVVIS   79 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~--~~~~~~~-~~~d~vi~   79 (292)
                      +|||+||+|.+|...++.+...|.+|++++++     +++.+.++.+   +.+.+ .|..+.  +.+.++. .++|+||+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~-----~~~~~~~~~l---Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid  222 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGK-----AAEHDYLRVL---GAKEV-LAREDVMAERIRPLDKQRWAAAVD  222 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----TTCHHHHHHT---TCSEE-EECC---------CCSCCEEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHc---CCcEE-EecCCcHHHHHHHhcCCcccEEEE
Confidence            79999999999999999999999999999998     5666555443   33322 233332  2222222 25899999


Q ss_pred             cCcC
Q 039623           80 TVSR   83 (292)
Q Consensus        80 ~a~~   83 (292)
                      ++|.
T Consensus       223 ~~g~  226 (328)
T 1xa0_A          223 PVGG  226 (328)
T ss_dssp             CSTT
T ss_pred             CCcH
Confidence            9985

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.96  E-value=0.0003  Score=59.76  Aligned_cols=72  Identities=18%  Similarity=0.039  Sum_probs=49.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhh-Hhhhh------cCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKL-IEIFK------NLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~------~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||.|+|| |.+|..++..|...|+ +|.+++++     +++.+. ...+.      .....+...     .++.+++++
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~-----~~~~~~~~~~l~~~~~~~~~~~~i~~t-----~d~~ea~~~   78 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVV-----KGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTG   78 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSS-----SSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECC-----hhHHHHHHHHHHhhhhccCCCCEEEEe-----CCHHHHhCC
Confidence            58999997 9999999999999998 99999998     444433 11111      111111110     224457889


Q ss_pred             CCEEEEcCcCC
Q 039623           74 VDVVISTVSRG   84 (292)
Q Consensus        74 ~d~vi~~a~~~   84 (292)
                      +|+||.++|..
T Consensus        79 aDiVi~a~g~p   89 (331)
T 1pzg_A           79 ADCVIVTAGLT   89 (331)
T ss_dssp             CSEEEECCSCS
T ss_pred             CCEEEEccCCC
Confidence            99999999655

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.95  E-value=0.0022  Score=53.28  Aligned_cols=34  Identities=29%  Similarity=0.385  Sum_probs=31.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|.|+| .|.||+.+++.|...|++|.+.+|+..
T Consensus       123 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~  156 (290)
T 3gvx_A          123 KALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSV  156 (290)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred             chheeec-cCchhHHHHHHHHhhCcEEEEEecccc
Confidence            5899999 799999999999999999999999843

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.95  E-value=0.00024  Score=60.16  Aligned_cols=70  Identities=17%  Similarity=0.090  Sum_probs=48.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhH----hhh---hcCCcEEEE-CCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLI----EIF---KNLGVNVLY-GDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~----~~~---~~~~v~~v~-~D~~d~~~~~~~~~   72 (292)
                      |||.|+|| |.+|..++..|...|+ +|.+++++     +++.+..    +..   ......+.. .|      + ++++
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~-----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~   71 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIV-----KNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLA   71 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSS-----SSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCC-----HHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhC
Confidence            68999997 9999999999999997 88888887     4444321    111   111222222 23      3 4578


Q ss_pred             cCCEEEEcCcCC
Q 039623           73 QVDVVISTVSRG   84 (292)
Q Consensus        73 ~~d~vi~~a~~~   84 (292)
                      ++|+||.++|.+
T Consensus        72 ~aD~Vi~a~g~p   83 (322)
T 1t2d_A           72 GADVVIVTAGFT   83 (322)
T ss_dssp             TCSEEEECCSCS
T ss_pred             CCCEEEEeCCCC
Confidence            999999999755

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.95  E-value=0.00073  Score=55.05  Aligned_cols=66  Identities=17%  Similarity=0.350  Sum_probs=49.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      +++|+|+ |.+|+.++..|.+.|. +|++..|+     +++.+.+..    ....+     ..+++.+.++++|+||++.
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~-----~~ka~~la~----~~~~~-----~~~~~~~~~~~aDiVInat  174 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRT-----IERAKALDF----PVKIF-----SLDQLDEVVKKAKSLFNTT  174 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESC-----HHHHHTCCS----SCEEE-----EGGGHHHHHHTCSEEEECS
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHH----HcccC-----CHHHHHhhhcCCCEEEECC
Confidence            6899995 8999999999999997 89999998     666543322    12221     2234566788999999987


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      +.
T Consensus       175 p~  176 (253)
T 3u62_A          175 SV  176 (253)
T ss_dssp             ST
T ss_pred             CC
Confidence            54

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.95  E-value=0.00097  Score=57.04  Aligned_cols=72  Identities=17%  Similarity=0.270  Sum_probs=51.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d   75 (292)
                      .+|||+|+ |.+|...++.+...|+ +|++++|+     +++.+.++.+   +.+.+ .|..+.   +.+.++..  ++|
T Consensus       169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~-----~~~~~~~~~~---Ga~~~-~~~~~~~~~~~v~~~~~g~g~D  238 (348)
T 2d8a_A          169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPS-----DFRRELAKKV---GADYV-INPFEEDVVKEVMDITDGNGVD  238 (348)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC-----HHHHHHHHHH---TCSEE-ECTTTSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHh---CCCEE-ECCCCcCHHHHHHHHcCCCCCC
Confidence            47999999 9999999999999998 99999998     6666555443   33322 244332   33444433  599


Q ss_pred             EEEEcCcC
Q 039623           76 VVISTVSR   83 (292)
Q Consensus        76 ~vi~~a~~   83 (292)
                      +||+++|.
T Consensus       239 ~vid~~g~  246 (348)
T 2d8a_A          239 VFLEFSGA  246 (348)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.95  E-value=0.0037  Score=52.68  Aligned_cols=86  Identities=16%  Similarity=0.188  Sum_probs=58.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhh-Hhhhhc------CCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKL-IEIFKN------LGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~~~~------~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |||.|+|| |.+|..++..|...|  .++.+++++     +++.+. ..++.+      ..+++.. |  +    .++++
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~   73 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLD-----TEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCH   73 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSC-----HHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----hhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhC
Confidence            48999998 999999999999887  478888887     444432 111111      3344443 2  2    34588


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.++|...             ....+.+.+.+.+..
T Consensus        74 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~  114 (317)
T 3d0o_A           74 DADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK  114 (317)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999998765             244555666666664

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.94  E-value=0.0011  Score=54.93  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=56.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|.|+| +|.+|+.+++.|.+.|+   +|++.+|+     +++.+.+...  .++...    .+   ..++++++|+||
T Consensus         4 ~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~-----~~~~~~l~~~--~gi~~~----~~---~~~~~~~aDvVi   68 (280)
T 3tri_A            4 SNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRS-----LDKLDFFKEK--CGVHTT----QD---NRQGALNADVVV   68 (280)
T ss_dssp             SCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSS-----SHHHHHHHHT--TCCEEE----SC---HHHHHSSCSEEE
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCC-----HHHHHHHHHH--cCCEEe----CC---hHHHHhcCCeEE
Confidence            7899999 59999999999999998   89999998     6666444321  244431    12   345678999999


Q ss_pred             EcCcCCCchhHHHHHHHHHH
Q 039623           79 STVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~   98 (292)
                      .+..+   .....+++....
T Consensus        69 lav~p---~~~~~vl~~l~~   85 (280)
T 3tri_A           69 LAVKP---HQIKMVCEELKD   85 (280)
T ss_dssp             ECSCG---GGHHHHHHHHHH
T ss_pred             EEeCH---HHHHHHHHHHHh
Confidence            98854   334455555443

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=96.94  E-value=0.0079  Score=50.54  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=46.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH-------cc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI-------KQ   73 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-------~~   73 (292)
                      |+||.|+|+.|++|...++.|.+.+.++.++....    +++....+.  ..+... ..   |.+++.+.+       .+
T Consensus         3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~----~~~~~~~~~--~~~~~~-~~---~~~~ll~~~~~l~~~~~~   72 (312)
T 3o9z_A            3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPA----TNVGLVDSF--FPEAEF-FT---EPEAFEAYLEDLRDRGEG   72 (312)
T ss_dssp             CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSS----CCCGGGGGT--CTTCEE-ES---CHHHHHHHHHHHHHTTCC
T ss_pred             ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCC----HHHHHHHhh--CCCCce-eC---CHHHHHHHhhhhcccCCC
Confidence            78999999889999999999999888777665332    333211111  122332 22   444444322       47


Q ss_pred             CCEEEEcCcCC
Q 039623           74 VDVVISTVSRG   84 (292)
Q Consensus        74 ~d~vi~~a~~~   84 (292)
                      +|+|+-+.+..
T Consensus        73 vD~V~I~tP~~   83 (312)
T 3o9z_A           73 VDYLSIASPNH   83 (312)
T ss_dssp             CSEEEECSCGG
T ss_pred             CcEEEECCCch
Confidence            99999877654

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.93  E-value=0.00081  Score=59.98  Aligned_cols=70  Identities=16%  Similarity=0.169  Sum_probs=49.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCCCCCCcchhhHhh------------hhc----CCcEEEECCCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRESTASDPVKGKLIEI------------FKN----LGVNVLYGDLQ   62 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~------------~~~----~~v~~v~~D~~   62 (292)
                      ||+|.|+| +|++|..++..|.+.  |++|++++|+     +++.+.+..            +..    .++.. ..   
T Consensus         5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~-----~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~---   74 (467)
T 2q3e_A            5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVN-----ESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-ST---   74 (467)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSC-----HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ES---
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECC-----HHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-EC---
Confidence            47899999 799999999999998  7999999998     665544321            100    12211 11   


Q ss_pred             CHHHHHHHHccCCEEEEcCcC
Q 039623           63 DHESLIKAIKQVDVVISTVSR   83 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~   83 (292)
                      |   +.++++++|+||.+.+.
T Consensus        75 ~---~~e~~~~aDvViiaVpt   92 (467)
T 2q3e_A           75 N---IDDAIKEADLVFISVNT   92 (467)
T ss_dssp             C---HHHHHHHCSEEEECCCC
T ss_pred             C---HHHHHhcCCEEEEEcCC
Confidence            2   33556789999999764

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.93  E-value=0.0023  Score=55.02  Aligned_cols=90  Identities=13%  Similarity=0.253  Sum_probs=54.7

Q ss_pred             ceEEEEccCCcchHHHHH-HHHhCCC---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILE-ASVKAGH---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ++|.|.||||++|+.|++ .|.++.+   ++..++-++.   ..+...   +......+  -+..+++.    ++++|+|
T Consensus         5 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a---G~~~~~---~~~~~~~v--~~~~~~~~----~~~vDvv   72 (377)
T 3uw3_A            5 MNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNA---GGKAPS---FAKNETTL--KDATSIDD----LKKCDVI   72 (377)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCT---TSBCCT---TCCSCCBC--EETTCHHH----HHTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhc---CCCHHH---cCCCceEE--EeCCChhH----hcCCCEE
Confidence            589999999999999999 6677664   4444433211   112111   11111222  23334443    4689999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcc-eeec
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVK-RFLP  107 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~-~~i~  107 (292)
                      |.|.|.   ..+..++..+.+.| ++ .+|-
T Consensus        73 f~a~~~---~~s~~~~~~~~~~G-~k~~VID   99 (377)
T 3uw3_A           73 ITCQGG---DYTNDVFPKLRAAG-WNGYWID   99 (377)
T ss_dssp             EECSCH---HHHHHHHHHHHHTT-CCSEEEE
T ss_pred             EECCCh---HHHHHHHHHHHHCC-CCEEEEe
Confidence            999884   34666777777788 75 4554

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.92  E-value=0.0022  Score=55.88  Aligned_cols=73  Identities=23%  Similarity=0.349  Sum_probs=52.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-------------CH----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-------------DH----   64 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-------------d~----   64 (292)
                      ++|+|+|+ |-+|...++.+...|.+|++++|+     +++.+.++.   .+.+++..|..             +.    
T Consensus       173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~-----~~~~~~~~~---lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~  243 (401)
T 1x13_A          173 AKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTR-----PEVKEQVQS---MGAEFLELDFKEEAGSGDGYAKVMSDAFIK  243 (401)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----GGGHHHHHH---TTCEECCC--------CCHHHHHHSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHH---cCCEEEEecccccccccccchhhccHHHHH
Confidence            47999995 999999999999999999999998     666544433   35555433321             11    


Q ss_pred             ---HHHHHHHccCCEEEEcCcC
Q 039623           65 ---ESLIKAIKQVDVVISTVSR   83 (292)
Q Consensus        65 ---~~~~~~~~~~d~vi~~a~~   83 (292)
                         +.+.+++.++|+||.+++.
T Consensus       244 ~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          244 AEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHHHHHHCSEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCcc
Confidence               1466777789999999644

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.92  E-value=0.0046  Score=53.08  Aligned_cols=71  Identities=23%  Similarity=0.238  Sum_probs=52.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-CHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-DHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-d~~~~~~~~~~~d~vi~   79 (292)
                      ||||+|+| .|..|..++..+.+.|++|++++.++....  .        ..--+++..|.. |.+.+....+++|+|+-
T Consensus         1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~--~--------~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~   69 (363)
T 4ffl_A            1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQALI--R--------NYADEFYCFDVIKEPEKLLELSKRVDAVLP   69 (363)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTT--T--------TTSSEEEECCTTTCHHHHHHHHTSSSEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCChh--H--------hhCCEEEECCCCcCHHHHHHHhcCCCEEEE
Confidence            99999999 589999999999999999999987744321  0        011245556654 66777777779999986


Q ss_pred             cCc
Q 039623           80 TVS   82 (292)
Q Consensus        80 ~a~   82 (292)
                      ..+
T Consensus        70 ~~~   72 (363)
T 4ffl_A           70 VNE   72 (363)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            544

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=96.92  E-value=0.045  Score=45.45  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=55.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~~   80 (292)
                      +++|.|+||..|+.+++.|.+.|+++.+.. ++...  . .+      -.++.++       .++.++.+  ++|+++.+
T Consensus        15 ~v~V~Gasg~~G~~~~~~l~~~g~~~V~~V-nP~~~--g-~~------i~G~~vy-------~sl~el~~~~~~Dv~ii~   77 (294)
T 2yv1_A           15 KAIVQGITGRQGSFHTKKMLECGTKIVGGV-TPGKG--G-QN------VHGVPVF-------DTVKEAVKETDANASVIF   77 (294)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCEEEEE-CTTCT--T-CE------ETTEEEE-------SSHHHHHHHHCCCEEEEC
T ss_pred             EEEEECCCCCHHHHHHHHHHhCCCeEEEEe-CCCCC--C-ce------ECCEeee-------CCHHHHhhcCCCCEEEEc
Confidence            578889999999999999999999844333 32210  0 00      1233332       12444555  89999987


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .+   -..+..+++.|.++| ++.++.
T Consensus        78 vp---~~~~~~~v~ea~~~G-i~~vVi  100 (294)
T 2yv1_A           78 VP---APFAKDAVFEAIDAG-IELIVV  100 (294)
T ss_dssp             CC---HHHHHHHHHHHHHTT-CSEEEE
T ss_pred             cC---HHHHHHHHHHHHHCC-CCEEEE
Confidence            66   356788888888898 885553

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.92  E-value=0.00063  Score=54.96  Aligned_cols=93  Identities=18%  Similarity=0.284  Sum_probs=54.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEE-EecCCCCCCC-cchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFA-LVRESTASDP-VKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~-~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d   75 (292)
                      ||||+|+|+ |.+|+.+++.+.+.++++.+ ++|+...... .-...++.+.  +.++ ..|++.++...+.++   +..
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~--~~DV-vIDft~p~a~~~~~~l~~g~~   78 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK--GADV-AIDFSNPNLLFPLLDEDFHLP   78 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT--TCSE-EEECSCHHHHHHHHTSCCCCC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh--CCCE-EEEeCChHHHHHHHHHhcCCc
Confidence            689999998 99999999999998767665 4555321000 0001112222  3333 357777777655543   577


Q ss_pred             EEEEcCcCCCchhHHHHHHHHHH
Q 039623           76 VVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      +|+.+.|... .....+.++|++
T Consensus        79 vVigTTG~s~-e~~~~l~~aa~~  100 (243)
T 3qy9_A           79 LVVATTGEKE-KLLNKLDELSQN  100 (243)
T ss_dssp             EEECCCSSHH-HHHHHHHHHTTT
T ss_pred             eEeCCCCCCH-HHHHHHHHHHhc
Confidence            8887776432 233444455443

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.91  E-value=0.0039  Score=52.23  Aligned_cols=86  Identities=21%  Similarity=0.299  Sum_probs=55.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh-Hhhhhc-----CCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL-IEIFKN-----LGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~~~~-----~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||.|+|| |.+|..++..|...|+  +|.+++++     +++.+. ...+.+     ....+...   +.    +.+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~-----~~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~   67 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRD-----EDRAQAEAEDIAHAAPVSHGTRVWHG---GH----SELAD   67 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----HHHHHHHHHHHTTSCCTTSCCEEEEE---CG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----HHHHHHHHHhhhhhhhhcCCeEEEEC---CH----HHhCC
Confidence            68999997 9999999999999998  89999998     554432 112211     12233221   22    35789


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+||.+++...             ....+.+++.+.+..
T Consensus        68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~  107 (304)
T 2v6b_A           68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA  107 (304)
T ss_dssp             CSEEEECC------------CHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC
Confidence            999999997654             234466666666654

>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*

Probab=96.91  E-value=0.0068  Score=51.38  Aligned_cols=95  Identities=21%  Similarity=0.183  Sum_probs=59.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-----------HHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-----------HESLIK   69 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-----------~~~~~~   69 (292)
                      ++|.|+|+||.||+..+.-+.++ +++|.+++-..+   .++....-....+.+ +...|-.+           .+.+.+
T Consensus         4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n---~~~l~~q~~~f~p~~-v~v~~~~~~~~~l~~~~~G~~~l~e   79 (376)
T 3a06_A            4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSN---LELAFKIVKEFNVKN-VAITGDVEFEDSSINVWKGSHSIEE   79 (376)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSC---HHHHHHHHHHHTCCE-EEECSSCCCCCSSSEEEESTTHHHH
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCC---HHHHHHHHHHcCCCE-EEEccHHHHHHHHHHHccCHHHHHH
Confidence            68999999999999999888887 588988854321   444322211122322 22233322           244556


Q ss_pred             HHc--cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC
Q 039623           70 AIK--QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        70 ~~~--~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~  100 (292)
                      ++.  ++|+|+.+..-..                       +.....+.++++++|
T Consensus        80 l~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g  135 (376)
T 3a06_A           80 MLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKG  135 (376)
T ss_dssp             HHHHHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHC
T ss_pred             HhcCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcC
Confidence            664  6999998864333                       456677777777765

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.91  E-value=0.0014  Score=54.87  Aligned_cols=33  Identities=24%  Similarity=0.521  Sum_probs=30.9

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |++|.|+|+ |.+|..++..|.+.|++|++++|+
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~   47 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQT   47 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC
Confidence            478999995 999999999999999999999998

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.91  E-value=0.0024  Score=52.36  Aligned_cols=65  Identities=20%  Similarity=0.247  Sum_probs=48.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++++|+|+ |..|+.++..|.+.|.+|++..|+     ++|.+.+..+   +++.+  ++.+.       .++|+||++.
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt-----~~ka~~la~~---~~~~~--~~~~l-------~~~DiVInaT  180 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRS-----SRGLDFFQRL---GCDCF--MEPPK-------SAFDLIINAT  180 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----CTTHHHHHHH---TCEEE--SSCCS-------SCCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHC---CCeEe--cHHHh-------ccCCEEEEcc
Confidence            57999995 999999999999999999999999     6666555422   23333  23221       2789999987


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      +..
T Consensus       181 p~G  183 (269)
T 3phh_A          181 SAS  183 (269)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.0037  Score=53.46  Aligned_cols=86  Identities=22%  Similarity=0.264  Sum_probs=57.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECC--CCCHHHHHHHHc-----c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGD--LQDHESLIKAIK-----Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D--~~d~~~~~~~~~-----~   73 (292)
                      .+|||+|+ |.+|...++.+...|.+|++++++     +++.+.++.+   +.+ ++..+  -...+.+.+...     +
T Consensus       170 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~~~~~~~~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          170 TTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARS-----PRRLEVAKNC---GADVTLVVDPAKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT---TCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHh---CCCEEEcCcccccHHHHHHHHhccccCCC
Confidence            37999996 899999999999999999999887     6666555443   332 22222  222455666553     6


Q ss_pred             CCEEEEcCcCCCchhHHHHHHHHHH
Q 039623           74 VDVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        74 ~d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      +|+||+++|..  ......++.++.
T Consensus       241 ~D~vid~~g~~--~~~~~~~~~l~~  263 (352)
T 1e3j_A          241 PNVTIDCSGNE--KCITIGINITRT  263 (352)
T ss_dssp             CSEEEECSCCH--HHHHHHHHHSCT
T ss_pred             CCEEEECCCCH--HHHHHHHHHHhc
Confidence            99999999853  123344444443

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.89  E-value=0.00086  Score=59.91  Aligned_cols=77  Identities=23%  Similarity=0.280  Sum_probs=50.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh----cCCcE-EE-----ECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK----NLGVN-VL-----YGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~v~-~v-----~~D~~d~~~~~~~~   71 (292)
                      |||.|+| +|++|..++..|.+.|++|++++|+     +++.+.+..-.    .++++ .+     .+.+.-.+++.+++
T Consensus         9 ~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~-----~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~   82 (478)
T 2y0c_A            9 MNLTIIG-SGSVGLVTGACLADIGHDVFCLDVD-----QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAV   82 (478)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred             ceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHh
Confidence            7999999 7999999999999999999999998     66665443311    01110 00     00000001233456


Q ss_pred             ccCCEEEEcCcCC
Q 039623           72 KQVDVVISTVSRG   84 (292)
Q Consensus        72 ~~~d~vi~~a~~~   84 (292)
                      +++|+||-+.+.+
T Consensus        83 ~~aDvviiaVptp   95 (478)
T 2y0c_A           83 AHGDVQFIAVGTP   95 (478)
T ss_dssp             HHCSEEEECCCCC
T ss_pred             hcCCEEEEEeCCC
Confidence            6789999988753

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.88  E-value=0.0044  Score=46.45  Aligned_cols=74  Identities=12%  Similarity=0.103  Sum_probs=50.4

Q ss_pred             CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCC--cEEEECCCCCH--HHHHHHHc------cCCEEEE
Q 039623           10 TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLG--VNVLYGDLQDH--ESLIKAIK------QVDVVIS   79 (292)
Q Consensus        10 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--v~~v~~D~~d~--~~~~~~~~------~~d~vi~   79 (292)
                      +|.++...++.|.+.|++|++..|+.... ....+..+.....+  ...+.+|++++  +++.++++      +-|++||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~-~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSK-DAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTST-TSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccc-cccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence            47899999999999999999888864321 11101112222334  55667899988  88777664      2399999


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      |+|..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	292
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-53
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-52
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-20
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-13
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	8e-07
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-06
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	2e-06
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-06
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	7e-06
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	1e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	1e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	4e-04
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	0.002
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.004
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.004

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score =  173 bits (438), Expect = 5e-53
 Identities = 142/293 (48%), Positives = 195/293 (66%), Gaps = 6/293 (2%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LI+GGTGYIGK+I+ AS+  GHPT+ L R    S+  K +++  FK LG  ++   L DH
Sbjct: 7   LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH 66

Query: 65  ESLIKAIKQVDVVISTVSRG----QIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNV 120
           + L+ A+KQVDVVIS ++ G     I EQ K++ A+KEAGN+KRFLPSEFG D D  ++ 
Sbjct: 67  QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHA 126

Query: 121 VEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQI-GAPAPPREKVTIFGD 179
           ++P    + DK K+RRAIEA  I YTYVS N FAGYF  +LAQ+ G   PPR+KV I+GD
Sbjct: 127 LQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGD 186

Query: 180 GNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT 239
           GN   ++  EDD+ TYTI SID P+TLNKT+YIRPP N+ S  E++ +WE    + L+K 
Sbjct: 187 GNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKI 246

Query: 240 YVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           Y++ +  L D++D      ++    Y  F +GD  NFEI   + +EA++LYPE
Sbjct: 247 YISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEI-GPNAIEATKLYPE 298

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score =  171 bits (434), Expect = 2e-52
 Identities = 179/289 (61%), Positives = 216/289 (74%), Gaps = 3/289 (1%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVREST-ASDPVKGKLIEIFKNLGVNVLYGDLQD 63
           L+IG TGYIG+ + +AS+  GHPTF LVREST +S+  K +L+E FK  G N+++G + D
Sbjct: 7   LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD 66

Query: 64  HESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEP 123
           H SL++A+K VDVVISTV   QI  Q  II A+KE G VKRF PSEFGNDVD    V EP
Sbjct: 67  HASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAV-EP 125

Query: 124 AKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAG 183
           AKS +  K K+RRAIEAEGI YTYVS NCFAGYFL +LAQ G  APPR+KV I GDGNA 
Sbjct: 126 AKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNAR 185

Query: 184 AVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE 243
            V+ KE+DI T+TI ++D PRTLNKTLY+R P N  S NELV LWE KI KTLEK YV E
Sbjct: 186 VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPE 245

Query: 244 EKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE 292
           E++LK I D P P N+ +AI+++ FVKGDQ NFEI   +GVEAS+LYP+
Sbjct: 246 EEVLKLIADTPFPANISIAISHSIFVKGDQTNFEI-GPAGVEASQLYPD 293

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 87.0 bits (214), Expect = 3e-20
 Identities = 32/250 (12%), Positives = 76/250 (30%), Gaps = 20/250 (8%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            ++G TG  G  ++  +   GH   A V              E+     V +  G L ++
Sbjct: 7   AVVGATGRQGASLIRVAAAVGHHVRAQVH-----SLKGLIAEELQAIPNVTLFQGPLLNN 61

Query: 65  ESLIKAIKQVD----VVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNV 120
             L+  + +      +  ++ +  +I     +  A K AG ++ ++ S   +        
Sbjct: 62  VPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-- 119

Query: 121 VEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV----TI 176
             PA   +A K  +   +   G+  T+V    +   F      +       +        
Sbjct: 120 -WPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAP 178

Query: 177 FGDGNAGAVYNKEDDIATYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGK 234
           F         + E D+    +        +     + +       S  ++   +   + +
Sbjct: 179 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIAL--TFETLSPVQVCAAFSRALNR 236

Query: 235 TLEKTYVAEE 244
            +    V + 
Sbjct: 237 RVTYVQVPKV 246

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (159), Expect = 2e-13
 Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 29/216 (13%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
            I G TG  G   L  +V+AG+    LVR+S+         +        +V+ GD+   
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR--------LPSEGPRPAHVVVGDVLQA 58

Query: 65  ESLIKAIKQVDVVISTVS--------RGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDR 116
             + K +   D VI  +                  I+AA+K  G V + +       +  
Sbjct: 59  ADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWD 117

Query: 117 SQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI 176
              V    ++   D I++ + +   G++Y  V                    P     T+
Sbjct: 118 PTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGD------------QPLTGAYTV 165

Query: 177 FGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI 212
             DG   +    + D+  + +  +        + Y 
Sbjct: 166 TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 47.4 bits (111), Expect = 8e-07
 Identities = 34/294 (11%), Positives = 71/294 (24%), Gaps = 59/294 (20%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           LI GG G++G  +   ++  G         S          +    N     ++GD+++ 
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN--FEFVHGDIRNK 61

Query: 65  ESLIKAIK--QVDVVISTVSRGQIPEQAK---------------IIAAVKEAGNVKRFL- 106
             + + I     D       +  +                    ++ AV++  +    + 
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 107 -----------------PSEFGNDVDRSQNVVE---------PAKSAYADKIKIRRAIEA 140
                                   VD+     E            S  A    +      
Sbjct: 122 SSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 181

Query: 141 EGIQYTYVSCNCFAGYF-----------LPTLAQIGAPAPPREKVTIFGDGNAGAVYNKE 189
            G+       +   G                   +       +  TI G+G         
Sbjct: 182 FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241

Query: 190 DDIATYTINSIDGPRTLN--KTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYV 241
           +D+ +    ++     +            N  S  EL  L E+     +  T +
Sbjct: 242 EDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNL 295

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 43/270 (15%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI---EIFKNLGVNVLYGDL 61
           LI G TG  G  + E  ++ G+    + R +++ +  +   I       N   ++ YGDL
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64

Query: 62  QDHESLIKAIK--QVDVVISTVSRGQIPEQAK---------------IIAAVKEAG--NV 102
            D  +L + ++  Q D V +  +   +    +               ++ A++  G    
Sbjct: 65  SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 124

Query: 103 KRFL----PSEFGNDVDRSQNVVEP--AKSAYA-DKIKIRRAIEAEGIQY--TYVSCNCF 153
            RF        +G   +  Q    P   +S YA  K+            Y     +   F
Sbjct: 125 TRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILF 184

Query: 154 AGY-------FLPTL--AQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR 204
                     F+       I   A   E     G+ ++   +    D        +   +
Sbjct: 185 NHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ 244

Query: 205 TLNKTLYIRPPGNVYSFNELVTLWENKIGK 234
             +   ++   G  YS  + V +   ++G 
Sbjct: 245 PED---FVIATGVQYSVRQFVEMAAAQLGI 271

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 47.1 bits (110), Expect = 1e-06
 Identities = 7/63 (11%), Positives = 24/63 (38%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          L+ G  G++   ++E  ++ G+      R ++    ++ +    +       +  D+   
Sbjct: 15 LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ 74

Query: 65 ESL 67
           + 
Sbjct: 75 GAY 77

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 46.9 bits (110), Expect = 1e-06
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          L+ GG+GYIG       ++ GH    L     +   V   +IE         + GD+++ 
Sbjct: 4  LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVL-PVIERLGGKHPTFVEGDIRNE 62

Query: 65 ESLIKAIK--QVDVVI 78
            + + +    +D VI
Sbjct: 63 ALMTEILHDHAIDTVI 78

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 46.5 bits (108), Expect = 2e-06
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          LI+G  G+IG  + E  ++  H       E    D     +     +   + + GD+  H
Sbjct: 4  LILGVNGFIGNHLTERLLREDH------YEVYGLDIGSDAISRFLNHPHFHFVEGDISIH 57

Query: 65 ESLIKAIKQ 73
             I+   +
Sbjct: 58 SEWIEYHVK 66

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 44.8 bits (105), Expect = 5e-06
 Identities = 43/272 (15%), Positives = 83/272 (30%), Gaps = 42/272 (15%)

Query: 5   LIIGGTGYIGKKILEASVKAGHPTFA----LVRESTASDPVKGKLIEIFKNLGVNVLYGD 60
           L+ GG G+IG   +   +   +P       +V +S      +  L  +  +  +  ++GD
Sbjct: 4   LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGD 63

Query: 61  LQDHESLIKAIKQVDVVISTVSRGQIPE---------------QAKIIAAVKEAGNVKRF 105
           ++D   L + ++ VD ++   +   +                    ++    +AG  +  
Sbjct: 64  IRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVV 123

Query: 106 LPSE---FGNDVDRSQNVVEPAK--SAYAD-KIKIRRAIEAEGIQY--TYVSCNCFAGY- 156
             S    +G+    S     P +  S YA  K        A    Y        C   Y 
Sbjct: 124 HVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYG 183

Query: 157 -------FLPTL-AQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNK 208
                   +P     +         + ++GDG     +   DD        + G R    
Sbjct: 184 PYQHPEKLIPLFVTNLLD----GGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEI 239

Query: 209 TLYIRPPGNVYSFNELVTLWENKIGKTLEKTY 240
             Y    G   +  EL  +  + +G       
Sbjct: 240 --YHIGGGLELTNRELTGILLDSLGADWSSVR 269

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 44.7 bits (105), Expect = 6e-06
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          LI GG G+IG  ++   +K    T   + + T +  ++  L +I ++   N  + D+ D 
Sbjct: 4  LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE-SLSDISESNRYNFEHADICDS 62

Query: 65 ESLIKAIK--QVDVVI 78
            + +  +  Q D V+
Sbjct: 63 AEITRIFEQYQPDAVM 78

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.7 bits (104), Expect = 7e-06
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL----GVNVLYGD 60
          LI G TG  G  + E  +  G+    L+R S+  +  +   I I  +      + + Y D
Sbjct: 5  LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYAD 64

Query: 61 LQDHESLIKAIKQ 73
          L D  SL + I  
Sbjct: 65 LTDASSLRRWIDV 77

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.8 bits (102), Expect = 1e-05
 Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          L+ G TG  G  + +  ++ G+    LV   ++    + + + I  +  +    GD+ D 
Sbjct: 4  LVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGD--IQYEDGDMADA 61

Query: 65 ESLIK 69
           S+ +
Sbjct: 62 CSVQR 66

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          L+ GG GYIG   +   ++ G+        S ++     +L E+     +     DL D 
Sbjct: 5  LVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLTKHHIPFYEVDLCDR 63

Query: 65 ESLIKAIKQVDV 76
          + L K  K+  +
Sbjct: 64 KGLEKVFKEYKI 75

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 16/73 (21%), Positives = 22/73 (30%), Gaps = 8/73 (10%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           I G  G+I   I       GH   A   +            E            DL+  
Sbjct: 19 SITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHL--------VDLRVM 70

Query: 65 ESLIKAIKQVDVV 77
          E+ +K  + VD V
Sbjct: 71 ENCLKVTEGVDHV 83

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.7 bits (96), Expect = 4e-05
 Identities = 34/258 (13%), Positives = 75/258 (29%), Gaps = 33/258 (12%)

Query: 1   MAATLIIGGTGYIGKKILEASVKAGHPT--FALVRESTASDPVKGKLIEIFKNLGVNVLY 58
           +   L+ G +G  G+ + +   +         LVR +   + + G+          +V  
Sbjct: 3   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE---------ADVFI 53

Query: 59  GDLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQ 118
           GD+ D +S+  A + +D ++   S     +             +          D    +
Sbjct: 54  GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 113

Query: 119 NVVEPAKSAYADKIKIRRAIEAEG------------------IQYTYVSCNCFAGYFLPT 160
           N ++ AK A    I +  ++                          Y++ +      +  
Sbjct: 114 NQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRA 173

Query: 161 LAQIGAPAPPREKVTIFGD--GNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI--RPPG 216
              +      RE +    D             D+A   I ++      NK   +  +P G
Sbjct: 174 GGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEG 233

Query: 217 NVYSFNELVTLWENKIGK 234
                 +   L+     +
Sbjct: 234 TSTPTKDFKALFSQVTSR 251

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 40.7 bits (93), Expect = 1e-04
 Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 22/76 (28%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          L+ G TG +G ++  +    G+     V                          GD  + 
Sbjct: 4  LLFGKTGQVGWELQRSLAPVGNLIALDVHSKE--------------------FCGDFSNP 43

Query: 65 ESLIKAIKQV--DVVI 78
          + + + ++++  DV++
Sbjct: 44 KGVAETVRKLRPDVIV 59

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.7 bits (93), Expect = 1e-04
 Identities = 14/84 (16%), Positives = 25/84 (29%), Gaps = 15/84 (17%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL---------------IEIF 49
          ++IGG GY G        K  +    +          +  L                +  
Sbjct: 5  MVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL 64

Query: 50 KNLGVNVLYGDLQDHESLIKAIKQ 73
              + +  GD+ D E L ++ K 
Sbjct: 65 TGKSIELYVGDICDFEFLAESFKS 88

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
           + G TG+ G  +       G         +  + P   +   +     +    GD++D 
Sbjct: 12 FVTGHTGFKGGWLSLWLQTMGATVKGYSLTAP-TVPSLFETARVADG--MQSEIGDIRDQ 68

Query: 65 ESLIKAIKQ 73
            L+++I++
Sbjct: 69 NKLLESIRE 77

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 8/77 (10%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL------GVNVLY 58
          LI G TG  G  + E  ++ G+    +VR S++ +   G++  ++KN        + + Y
Sbjct: 5  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT--GRIEHLYKNPQAHIEGNMKLHY 62

Query: 59 GDLQDHESLIKAIKQVD 75
          GDL D   L+K I +V 
Sbjct: 63 GDLTDSTCLVKIINEVK 79

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          ++ GG G+IG   +             V +   +       +E      V ++ GD+ D 
Sbjct: 6  IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK-LTYAGNKANLEAILGDRVELVVGDIADA 64

Query: 65 ESLIKA 70
          E + K 
Sbjct: 65 ELVDKL 70

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 8/74 (10%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          LI GG G++G  + +  +  GH    +    T         I             +L +H
Sbjct: 5  LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHEN--------FELINH 56

Query: 65 ESLIKAIKQVDVVI 78
          + +     +VD + 
Sbjct: 57 DVVEPLYIEVDQIY 70

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 5/65 (7%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTA-----SDPVKGKLIEIFKNLGVNVLYG 59
          L+ GG GYIG   +   ++AG+    +     A     S P   + ++      V     
Sbjct: 6  LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEM 65

Query: 60 DLQDH 64
          D+ D 
Sbjct: 66 DILDQ 70

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 16/70 (22%), Positives = 26/70 (37%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          L+ G    IG+   EA +  G     +     A    K  L E F+      +  D+ D 
Sbjct: 7  LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 66

Query: 65 ESLIKAIKQV 74
          + L    ++V
Sbjct: 67 QQLRDTFRKV 76

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 36.0 bits (81), Expect = 0.004
 Identities = 8/74 (10%), Positives = 19/74 (25%), Gaps = 23/74 (31%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH 64
          LI G  G +G++I +              +                         D+ + 
Sbjct: 5  LITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNV 41

Query: 65 ESLIKAIKQVDVVI 78
           ++ K   +    +
Sbjct: 42 LAVNKFFNEKKPNV 55

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.5 bits (80), Expect = 0.004
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 5  LIIGGTGYIGKKILEASVKAGHPT--FALVRESTASDP 40
          L+ G TG  G+ +L+  +         A  R++ A  P
Sbjct: 6  LLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP 43

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	292
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	100.0
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.98
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.97
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.97
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.95
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.95
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.95
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.92
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.9
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.89
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.86
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.78
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.75
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.75
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.75
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.74
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.73
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.73
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.72
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.72
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.72
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.72
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.72
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.71
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.71
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.71
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.71
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.71
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.71
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.71
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.71
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.71
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.71
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.7
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.7
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.69
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.68
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.68
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.68
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.68
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.67
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.67
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.67
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.66
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.66
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.66
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.65
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.65
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.65
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.64
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.64
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.64
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.64
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.62
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.62
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.62
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.61
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.57
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.56
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.56
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.56
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.54
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.53
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.49
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.47
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.43
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.4
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.39
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.38
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.37
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.34
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.33
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.32
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.31
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.22
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.21
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.05
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.88
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.71
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.61
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.49
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.42
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.16
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	98.09
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	98.05
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	98.05
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.03
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	98.03
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.01
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.95
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.93
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.91
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.9
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.86
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.85
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.84
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.84
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.83
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.82
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.82
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.8
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.78
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.77
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.76
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.72
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.7
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.61
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.61
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.58
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.57
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.56
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.55
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.54
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.52
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.51
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.51
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.49
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.49
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.48
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	97.48
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.47
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.45
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.44
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.4
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.39
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.38
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.38
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.36
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.35
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.35
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.34
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.33
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.31
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.31
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.3
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.29
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.29
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.23
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.22
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.2
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.17
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.17
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.17
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.1
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.08
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.08
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.05
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.04
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.04
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.97
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.95
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.95
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.93
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.92
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.89
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.89
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.88
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.87
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.75
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.64
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.64
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.55
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.55
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.55
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.52
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.52
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.45
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.42
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.42
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.41
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.36
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.36
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.29
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.28
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.26
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.25
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.23
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.22
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.22
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.22
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.2
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.18
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	96.12
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.11
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.1
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.08
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.07
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.05
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	96.03
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.02
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.01
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.0
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.0
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.95
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.92
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.9
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.88
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.85
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	95.78
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.75
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	95.74
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.63
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.62
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.56
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.54
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.49
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.42
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.35
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.25
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	95.22
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.19
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.19
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.17
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.16
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.07
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.05
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.95
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.87
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.86
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.74
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.64
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.61
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.53
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.45
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.41
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.35
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.26
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	94.17
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	94.09
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.03
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.98
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.98
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	93.92
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.89
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.85
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.82
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	93.76
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.65
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.63
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.42
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	93.31
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.3
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.15
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.14
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.1
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.06
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.03
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.88
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	92.79
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.75
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.55
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.5
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	92.33
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.02
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.0
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.97
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.95
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.77
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.76
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	91.62
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.33
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.27
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.16
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.1
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.01
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.0
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.84
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.75
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.63
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.52
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	90.39
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	90.24
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.93
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.8
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.79
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	89.77
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	89.58
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.51
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	89.44
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	89.38
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.24
d2j9ga2	114	Biotin carboxylase (BC), N-terminal domain {Escher	89.16
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.09
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	88.92
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	88.79
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	88.75
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.71
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	88.43
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.2
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	87.9
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.45
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	87.09
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	86.96
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	86.94
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	86.92
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	86.91
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.83
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	86.56
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.27
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	85.99
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	85.84
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.72
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	85.45
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.93
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	84.15
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	83.55
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.81
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.57
d1ulza2	114	Biotin carboxylase (BC), N-terminal domain {Aquife	82.5
d2vjma1	427	Formyl-CoA transferase {Oxalobacter formigenes [Ta	82.46
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	82.27
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	82.11
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.07
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.91
d1uana_	227	Hypothetical protein TT1542 {Thermus thermophilus	81.76
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	81.75
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	81.63
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	81.43
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	81.39
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	81.23
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.06
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	81.04
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	81.02
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	80.65
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	80.06

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=100.00  E-value=9.6e-38  Score=264.46  Aligned_cols=290  Identities=49%  Similarity=0.837  Sum_probs=240.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      +||||||||||||++|+++|+++||+|++++|+....+..+.+.+..+...+++++.+|+.|.+.+.+++.+++++++++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~   83 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   83 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhh
Confidence            68999999999999999999999999999999876654556666667778899999999999999999999999999998


Q ss_pred             cCCC----chhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceecccc
Q 039623           82 SRGQ----IPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYF  157 (292)
Q Consensus        82 ~~~~----~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~  157 (292)
                      +...    .....+++++|.+.+..+++++|++|........+..+...++..|..++++....+++++++||+.++++.
T Consensus        84 ~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~  163 (312)
T d1qyda_          84 AGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF  163 (312)
T ss_dssp             CCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHHH
T ss_pred             hhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeecCC
Confidence            8655    678889999999887566777799887665534555566667779999999999999999999999999876


Q ss_pred             ccccccCC-CCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          158 LPTLAQIG-APAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       158 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      .+...... ......+.+.+++++++.++++|++|+|++++.++.+++..++.+++.++++.+|++|+++.+++.+|.+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~  243 (312)
T d1qyda_         164 AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNL  243 (312)
T ss_dssp             TTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred             ccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCC
Confidence            55443322 12245667888899999999999999999999999998888888888777778999999999999999999


Q ss_pred             ceeecCHHHHHHHHHhCCCChhhHHhhhhheeeeCCCccccccccccccccccCCC
Q 039623          237 EKTYVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE  292 (292)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  292 (292)
                      ++..+|.+++.+.+...++|........+..+..|....+..... ..+++++||+
T Consensus       244 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ea~~l~Pd  298 (312)
T d1qyda_         244 DKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYPE  298 (312)
T ss_dssp             EECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSS-EEEHHHHCTT
T ss_pred             eEEECCHHHHHHHHHhcCCcHhHHHHHHHHHHhcCcccccccCcc-hhhHHHhCCC
Confidence            999999999999999999998887777777777666555554333 3566777874

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=100.00  E-value=3.6e-37  Score=259.72  Aligned_cols=288  Identities=61%  Similarity=0.952  Sum_probs=238.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCC-CcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASD-PVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |||||||||||||++++++|+++||+|++++|++.... .++...+..+...+++++.+|+.+.+.+.+.+++++.++|+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~   83 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   83 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence            68999999999999999999999999999999865431 33445555666788999999999999999999999999999


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceecccccc
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGYFLP  159 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~  159 (292)
                      ++......+.++++++..++ ++++++ |+++..... .....+...++..+...+.++.+.+++++++||+.++|+..+
T Consensus        84 ~~~~~~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~  161 (307)
T d1qyca_          84 VGSLQIESQVNIIKAIKEVG-TVKRFFPSEFGNDVDN-VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR  161 (307)
T ss_dssp             CCGGGSGGGHHHHHHHHHHC-CCSEEECSCCSSCTTS-CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTT
T ss_pred             ccccccchhhHHHHHHHHhc-cccceeeecccccccc-ccccccccccccccccccchhhccCCCceecccceecCCCcc
Confidence            99888889999999999998 666555 777765554 333333344555888899999999999999999999998766


Q ss_pred             ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          160 TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      .+.........++...+++.+++.++++|++|+|++++.++.+++..++.+++.++++.+|+.|+++.+.+++|.+.++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~  241 (307)
T d1qyca_         162 SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKA  241 (307)
T ss_dssp             TTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEE
T ss_pred             chhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEE
Confidence            55444444467778888999999999999999999999999998877888888777779999999999999999999999


Q ss_pred             ecCHHHHHHHHHhCCCChhhHHhhhhheeeeCCCccccccccccccccccCCC
Q 039623          240 YVAEEKLLKDIQDAPIPLNVLLAITYATFVKGDQANFEINTASGVEASELYPE  292 (292)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  292 (292)
                      .+|.+++.+.+...+.|........+..+.++....+..... +.+..++||+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~P~  293 (307)
T d1qyca_         242 YVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPD  293 (307)
T ss_dssp             EECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-EEEHHHHCTT
T ss_pred             ECCHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccCcc-hhhHHHhCCC
Confidence            999999999999999998888777777777777665555333 5667778885

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-32  Score=215.78  Aligned_cols=191  Identities=20%  Similarity=0.246  Sum_probs=155.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |+||+||||||++|++++++|+++||+|++++|+     +++.   ......+++++.+|++|.+++.++++++|+|||+
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~-----~~~~---~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~   74 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD-----SSRL---PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----GGGS---CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcC-----hhhc---ccccccccccccccccchhhHHHHhcCCCEEEEE
Confidence            6899999999999999999999999999999998     4443   2233578999999999999999999999999999


Q ss_pred             CcCCC--------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecc
Q 039623           81 VSRGQ--------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCN  151 (292)
Q Consensus        81 a~~~~--------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~  151 (292)
                      +|...        ...++++++++++++ ++++|+ |+.+..... .........++..|...|+++++.+++|+++||+
T Consensus        75 ~g~~~~~~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~-~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp~  152 (205)
T d1hdoa_          75 LGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP-TKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPP  152 (205)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT-TCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred             eccCCchhhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCC-ccccccccccchHHHHHHHHHHhcCCceEEEecc
Confidence            98754        567899999999999 999998 554433322 2222233456779999999999999999999999


Q ss_pred             eeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEc
Q 039623          152 CFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIR  213 (292)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~  213 (292)
                      .+.+...            .+......++.....+|+++|+|++++.++++++..|+.+++.
T Consensus       153 ~~~~~~~------------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         153 HIGDQPL------------TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             EEECCCC------------CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             eecCCCC------------cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence            9876421            2233445556667789999999999999999988778888875

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-31  Score=228.48  Aligned_cols=239  Identities=17%  Similarity=0.241  Sum_probs=178.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |||||||||||||++|++.|+++|++|++++|..... .......+.....+++++++|++|.+.+.++++  ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            6799999999999999999999999999999864433 333344445567799999999999999999998  7999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCccC----CccCCCCcchHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVDRS----QNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~~~----~~~~~~~~~~~~~K~~~e~  136 (292)
                      +|+...               +.++.+++++|++.+ ++++|+    ++|+......    .....|..+|+.+|...|+
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~  158 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ  158 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhH
Confidence            998754               788999999999998 999987    2354332211    3333566677779999999


Q ss_pred             HHHH-----cCccEEEEecceeccccccccc-c------CCC-------CCCCCCceeecC------CCcceEEeeccch
Q 039623          137 AIEA-----EGIQYTYVSCNCFAGYFLPTLA-Q------IGA-------PAPPREKVTIFG------DGNAGAVYNKEDD  191 (292)
Q Consensus       137 ~~~~-----~~~~~~~ir~~~~~~~~~~~~~-~------~~~-------~~~~~~~~~~~~------~~~~~~~~i~v~D  191 (292)
                      ++..     .+.+++++|++.++|....... .      ..+       ....+..+.+.+      ++.+.++|+|++|
T Consensus       159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D  238 (338)
T d1udca_         159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD  238 (338)
T ss_dssp             HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred             HHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEee
Confidence            8874     4789999998888775221100 0      000       001233455554      4778899999999


Q ss_pred             HHHHHHHhhcC--CcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCH
Q 039623          192 IATYTINSIDG--PRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE  243 (292)
Q Consensus       192 ~a~~~~~~l~~--~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  243 (292)
                      ++.++..+...  ....+++||+++.. .+|+.|+++.+.+.+|.++++...+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~i~Ni~~~~-~~si~e~~~~i~~~~g~~~~~~~~~~  291 (338)
T d1udca_         239 LADGHVVAMEKLANKPGVHIYNLGAGV-GNSVLDVVNAFSKACGKPVNYHFAPR  291 (338)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEESCSS-CEEHHHHHHHHHHHHTSCCCEEEECC
T ss_pred             hhhhccccccccccccCcceeeecCCC-CCcHHHHHHHHHHHHCCCCceEECCC
Confidence            99887776653  23345788887655 89999999999999998777766553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.7e-32  Score=233.49  Aligned_cols=234  Identities=18%  Similarity=0.157  Sum_probs=169.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh---hhhcCCcEEEECCCCCHHHHHHHHc--cCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE---IFKNLGVNVLYGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~   76 (292)
                      |.|||||||||||++|+++|+++|++|++++|..+..+..+.+.+.   .....+++++.+|++|.+++.++++  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            5688999999999999999999999999999975543333332222   2235689999999999999999998  5699


Q ss_pred             EEEcCcCCC---------------chhHHHHHHHHHHhCCcc---eeec-c---CCCCCCcc---CCccCCCCcchHHHH
Q 039623           77 VISTVSRGQ---------------IPEQAKIIAAVKEAGNVK---RFLP-S---EFGNDVDR---SQNVVEPAKSAYADK  131 (292)
Q Consensus        77 vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~---~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K  131 (292)
                      |||+|+...               +.++.+++++|++.+ ++   +||+ |   +||.....   ++.+..|.++|..+|
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK  160 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHH
Confidence            999998754               678999999999986 43   6887 3   47754322   155566777777799


Q ss_pred             HHHHHHHHH----cCccEEEEecceecccccc-cc----c-cCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          132 IKIRRAIEA----EGIQYTYVSCNCFAGYFLP-TL----A-QIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       132 ~~~e~~~~~----~~~~~~~ir~~~~~~~~~~-~~----~-~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      +.+|++++.    .+++++++||+.++|+... ..    . .... ...........+++++.++++|++|+|+++..++
T Consensus       161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~  240 (357)
T d1db3a_         161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML  240 (357)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH
Confidence            999998874    5899999998877775211 11    0 0000 0022334556789999999999999999999999


Q ss_pred             cCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCccee
Q 039623          201 DGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKT  239 (292)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~  239 (292)
                      +++  .++.|+++++. .+|++|+++.+.+.+|...+..
T Consensus       241 ~~~--~~~~yni~sg~-~~s~~~~~~~~~~~~g~~~~~~  276 (357)
T d1db3a_         241 QQE--QPEDFVIATGV-QYSVRQFVEMAAAQLGIKLRFE  276 (357)
T ss_dssp             SSS--SCCCEEECCCC-CEEHHHHHHHHHHTTTEEEEEE
T ss_pred             hCC--CCCeEEECCCC-ceehHHHHHHHHHHhCCccccc
Confidence            875  35788887554 9999999999999998665543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.98  E-value=1.5e-31  Score=227.70  Aligned_cols=228  Identities=18%  Similarity=0.282  Sum_probs=177.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEE------EEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTF------ALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~------~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d   75 (292)
                      |||||||||||||++|++.|+++|++|.      ++++.....  .+..........+++++.+|+.+.........++|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG--NRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC--CGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccc--cHhHhhhhhcCCCeEEEEeccccchhhhccccccc
Confidence            6899999999999999999999998654      343332221  11111122245689999999999999988888999


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCcc---CCccCCCCcchHHHHHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVDR---SQNVVEPAKSAYADKIK  133 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~~---~~~~~~~~~~~~~~K~~  133 (292)
                      .|+|+|+...               +.++.+++++|++.+ ++++|+    +.||.....   ++.+..|.++|..+|..
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~  157 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG  157 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            9999998765               678999999999998 899997    346654321   16666677777679999


Q ss_pred             HHHHHHH----cCccEEEEecceecccccc------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          134 IRRAIEA----EGIQYTYVSCNCFAGYFLP------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       134 ~e~~~~~----~~~~~~~ir~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      +|.+++.    .+++++++||+.++|+...      .+...   ...++++.+++++++.++|+|++|+|+++..+++++
T Consensus       158 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~---~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~  234 (322)
T d1r6da_         158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTN---LLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (322)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHH---HHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHH---HHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence            9998864    5899999998888875321      11111   146678889999999999999999999999999886


Q ss_pred             cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          204 RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       204 ~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                      . .+++||+++ ++.+|+.|+++.+.+.+|.+.+
T Consensus       235 ~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~  266 (322)
T d1r6da_         235 R-AGEIYHIGG-GLELTNRELTGILLDSLGADWS  266 (322)
T ss_dssp             C-TTCEEEECC-CCEEEHHHHHHHHHHHHTCCGG
T ss_pred             C-CCCeeEEee-cccchhHHHHHHHHHHhCCCcc
Confidence            5 467888875 4599999999999999997755

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=5.4e-31  Score=226.43  Aligned_cols=232  Identities=16%  Similarity=0.217  Sum_probs=176.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ||||||||||||||++|+++|+++|++|.++.++.... ......+..+...+++++.+|+.|.+.+..++.+++.|+|+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~-~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY-AGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT-TCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc-cccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            89999999999999999999999999887777653222 22333334555779999999999999999999999999999


Q ss_pred             CcCCC---------------chhHHHHHHHHHHhCCcceeec---cCCCCCCc---------------cCCccCCCCcch
Q 039623           81 VSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP---SEFGNDVD---------------RSQNVVEPAKSA  127 (292)
Q Consensus        81 a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~---s~~g~~~~---------------~~~~~~~~~~~~  127 (292)
                      |+...               +.++.+++++|++.+ .+.++.   +.||....               ....+..|.+.|
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            98765               678999999999998 554443   34553110               003344455556


Q ss_pred             HHHHHHHHHHHHH----cCccEEEEecceecccccc--c-cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          128 YADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLP--T-LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       128 ~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      ..+|.++|++++.    .+++++++||+.++|+...  . +.........+.+..+++++.+.++|+|++|+|++++.++
T Consensus       160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~  239 (346)
T d1oc2a_         160 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAIL  239 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHH
Confidence            6699999988864    6899999998888875321  1 1100001135666788999999999999999999999998


Q ss_pred             cCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          201 DGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      .++.. ++.|++++.+ ..++.++++.+.+.++.+.
T Consensus       240 ~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~  273 (346)
T d1oc2a_         240 TKGRM-GETYLIGADG-EKNNKEVLELILEKMGQPK  273 (346)
T ss_dssp             HHCCT-TCEEEECCSC-EEEHHHHHHHHHHHTTCCT
T ss_pred             hhccc-Cccccccccc-cccchHHHHHHHHHhCCCC
Confidence            87644 6688888666 9999999999999988643

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=3e-30  Score=223.11  Aligned_cols=230  Identities=17%  Similarity=0.155  Sum_probs=177.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||||||||||||++|+++|+++||+|++++|.+....        .......++..+|+.|.+.+.++++++|+|||+|
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a   87 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--------TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA   87 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--------CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--------hhhcccCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence            78999999999999999999999999999988654321        1113467899999999999999999999999999


Q ss_pred             cCCC----------------chhHHHHHHHHHHhCCcceeec-cC---CCCCCcc----------CCccCCCCcchHHHH
Q 039623           82 SRGQ----------------IPEQAKIIAAVKEAGNVKRFLP-SE---FGNDVDR----------SQNVVEPAKSAYADK  131 (292)
Q Consensus        82 ~~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s~---~g~~~~~----------~~~~~~~~~~~~~~K  131 (292)
                      +...                +.++.+++++|++.+ ++++|+ |+   ||.....          ...+..|.+.|..+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK  166 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEK  166 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHHHHHH
Confidence            7655                678999999999999 999997 32   4422111          033445666676799


Q ss_pred             HHHHHHHHH----cCccEEEEecceeccccccccccCCC--------CCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          132 IKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIGA--------PAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       132 ~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+|++++.    .+++++++||+.++|...+.......        ..........+++|.+.++|+|++|+++++..+
T Consensus       167 ~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~  246 (363)
T d2c5aa1         167 LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRL  246 (363)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHH
Confidence            999998864    58999999987777653221111100        013455677888999999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCH
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE  243 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  243 (292)
                      ++++  .+++||+++.. .+|+.|+++.+.+..|.+.++...+.
T Consensus       247 ~~~~--~~~~~ni~~~~-~~s~~~l~~~i~~~~g~~~~i~~~~~  287 (363)
T d2c5aa1         247 TKSD--FREPVNIGSDE-MVSMNEMAEMVLSFEEKKLPIHHIPG  287 (363)
T ss_dssp             HHSS--CCSCEEECCCC-CEEHHHHHHHHHHTTTCCCCEEEECC
T ss_pred             HhCC--CCCeEEEecCC-cccHHHHHHHHHHHhCCCCceEeCCC
Confidence            9865  36788887655 99999999999999998877665544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=1.3e-30  Score=225.10  Aligned_cols=224  Identities=17%  Similarity=0.204  Sum_probs=168.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEE-EecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHHc--cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFA-LVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAIK--QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~--~~d~v   77 (292)
                      |||||||||||||++|+++|++.|++|++ +++.+...   +.+.+.. ....+++++.+|++|.+.+.++++  ++|+|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG---NLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC---CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc---cHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            68999999999999999999999998554 44432221   1222222 235689999999999999999987  58999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhC--------Ccceeec----cCCCCCCcc-------------C
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAG--------NVKRFLP----SEFGNDVDR-------------S  117 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~--------~~~~~i~----s~~g~~~~~-------------~  117 (292)
                      ||+|+...               +.++.+++++|++.+        .+++||+    .+||.....             .
T Consensus        78 ihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred             EECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence            99999755               567899999998865        1347886    246643211             0


Q ss_pred             CccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccc------cccccCCCCCCCCCceeecCCCcceEEee
Q 039623          118 QNVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFL------PTLAQIGAPAPPREKVTIFGDGNAGAVYN  187 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  187 (292)
                      ..+..|.+.|..+|..+|.++..    .+++++++||+.++|+..      +.+...   ...++++.++++|++.++|+
T Consensus       158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~---~~~g~~~~v~g~g~~~r~~i  234 (361)
T d1kewa_         158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILN---ALEGKPLPIYGKGDQIRDWL  234 (361)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHH---HHHTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHH---HHcCCCcEEeCCCCeEEeCE
Confidence            23344555566699999999874    689999999888777532      222221   14567788899999999999


Q ss_pred             ccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          188 KEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      |++|+|+++..+++++.. +++||+++ +...+..|+++.+.+.++
T Consensus       235 ~v~D~a~ai~~~~~~~~~-~~~~Ni~s-~~~~s~~~~~~~i~~~~~  278 (361)
T d1kewa_         235 YVEDHARALHMVVTEGKA-GETYNIGG-HNEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             EHHHHHHHHHHHHHHCCT-TCEEEECC-CCEEEHHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHhcCCC-CCeEEECC-CCCcchHHHHhHhhhhcc
Confidence            999999999999987654 67888864 458999999999987653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3.6e-30  Score=220.86  Aligned_cols=233  Identities=21%  Similarity=0.250  Sum_probs=171.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHH-HHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIK-AIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~-~~~~~d~vi~   79 (292)
                      |||||||||||||++|+++|+++| ++|+++++..     .+..  .....++++++.+|+++.+.+.+ ++.++|+|||
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~-----~~~~--~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih   73 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS-----DAIS--RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC-----GGGG--GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCC-----cchh--hhccCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence            689999999999999999999999 5899998863     2221  22236789999999998765554 6678999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeecc---CCCCCCccC---------CccC-CCCcchHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPS---EFGNDVDRS---------QNVV-EPAKSAYADK  131 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s---~~g~~~~~~---------~~~~-~~~~~~~~~K  131 (292)
                      +|+...               +.++.+++++|.+.+ ++.++.|   .|+......         ..+. .|...|..+|
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK  152 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK  152 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred             ccccccccccccCCcccccccccccccccccccccc-ccccccccccccccccccccccccccccccccCCCcchhhhcc
Confidence            999865               778999999999998 7766543   344322110         1122 2223344499


Q ss_pred             HHHHHHHHH----cCccEEEEecceeccccccccccCCC-----------CCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          132 IKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIGA-----------PAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       132 ~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ..+|+++..    .+++++++|++.+++...........           ..+.++++.+++++++.++|+|++|+|+++
T Consensus       153 ~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~  232 (342)
T d2blla1         153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (342)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             cchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccccee
Confidence            999998864    58999999977777653222111000           013567788899999999999999999999


Q ss_pred             HHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          197 INSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       197 ~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      ..+++++  ...+++||+++++..+|++|+++.+.+.+|........|
T Consensus       233 ~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~  280 (342)
T d2blla1         233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFP  280 (342)
T ss_dssp             HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSC
T ss_pred             eeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccC
Confidence            9999875  345788999765557899999999999988765544433

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-31  Score=225.47  Aligned_cols=226  Identities=17%  Similarity=0.239  Sum_probs=168.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||||||||||||++|+++|+++|++|++++|..+.. .+...  .......+++...|+.+     .++.++|+|||+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~-~~~~~--~~~~~~~~d~~~~~~~~-----~~~~~~d~VihlA   73 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNVE--HWIGHENFELINHDVVE-----PLYIEVDQIYHLA   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGTG--GGTTCTTEEEEECCTTS-----CCCCCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCC-HHHHH--HhcCCCceEEEehHHHH-----HHHcCCCEEEECc
Confidence            6899999999999999999999999999999854322 22111  11234456777776654     4556899999999


Q ss_pred             cCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCccC--------CccCCCCcchHHHHHHH
Q 039623           82 SRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVDRS--------QNVVEPAKSAYADKIKI  134 (292)
Q Consensus        82 ~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~~~--------~~~~~~~~~~~~~K~~~  134 (292)
                      +...               +.++.+++++|++.+ + ++|+    ++||......        ..+..|.+.|..+|.++
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~  151 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA  151 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHH
Confidence            9754               568999999999998 6 4555    3465432110        23445655666699999


Q ss_pred             HHHHHH----cCccEEEEecceecccccc--------ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          135 RRAIEA----EGIQYTYVSCNCFAGYFLP--------TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       135 e~~~~~----~~~~~~~ir~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      |.+++.    .+++++++||+.++|+...        .+...   ...++++.+++++.+.++|+|++|+++++..+++.
T Consensus       152 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~---~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         152 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQ---ALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHH---HHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHH---HHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence            998864    6899999998888875322        11111   14567788899999999999999999999999976


Q ss_pred             CcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCH
Q 039623          203 PRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE  243 (292)
Q Consensus       203 ~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  243 (292)
                      ..  ++.||+++. ...++.++++.+++.+|.+.++...+.
T Consensus       229 ~~--~~~~n~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~  266 (312)
T d2b69a1         229 NV--SSPVNLGNP-EEHTILEFAQLIKNLVGSGSEIQFLSE  266 (312)
T ss_dssp             SC--CSCEEESCC-CEEEHHHHHHHHHHHHTCCCCEEEECC
T ss_pred             cc--CCceEecCC-cccchhhHHHHHHHHhCCCCceEECCC
Confidence            53  567888754 599999999999999998877665543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.4e-29  Score=221.14  Aligned_cols=238  Identities=18%  Similarity=0.190  Sum_probs=169.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEec-------------CCCC--CCCcchhhHhhhhcCCcEEEECCCCCHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVR-------------ESTA--SDPVKGKLIEIFKNLGVNVLYGDLQDHES   66 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-------------~~~~--~~~~~~~~~~~~~~~~v~~v~~D~~d~~~   66 (292)
                      |||||||||||||++|+++|++.||+|++++.             +...  ...+.......+.+.+++++.+|++|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            78999999999999999999999999999961             1000  00112223334456789999999999999


Q ss_pred             HHHHHc--cCCEEEEcCcCCC------------------chhHHHHHHHHHHhCCcc-eeec-cC---CCCCCccC----
Q 039623           67 LIKAIK--QVDVVISTVSRGQ------------------IPEQAKIIAAVKEAGNVK-RFLP-SE---FGNDVDRS----  117 (292)
Q Consensus        67 ~~~~~~--~~d~vi~~a~~~~------------------~~~~~~l~~a~~~~~~~~-~~i~-s~---~g~~~~~~----  117 (292)
                      +.++++  ++|+|||+|+...                  +.++.+++++|++.+ ++ ++++ |+   |+......    
T Consensus        82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc-cccceeecccccccccccccccccc
Confidence            999998  5799999998643                  678999999999998 55 4554 22   33211100    


Q ss_pred             ------------CccCCCCcchHHHHHHHHHHHH----HcCccEEEEecceeccccccccc------cC----CC-----
Q 039623          118 ------------QNVVEPAKSAYADKIKIRRAIE----AEGIQYTYVSCNCFAGYFLPTLA------QI----GA-----  166 (292)
Q Consensus       118 ------------~~~~~~~~~~~~~K~~~e~~~~----~~~~~~~~ir~~~~~~~~~~~~~------~~----~~-----  166 (292)
                                  ..+..|.+.|..+|..+|.++.    +.+++++++||+.++|.......      ..    ..     
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  240 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence                        1233455556669999999875    46899999998888875321110      00    00     


Q ss_pred             -----CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHh---CCCcce
Q 039623          167 -----PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKI---GKTLEK  238 (292)
Q Consensus       167 -----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~---~~~~~~  238 (292)
                           ....++++.+++++.+.++|+|++|+++++..+++++...+..+.+.+.++.+|+.|+++.+.+..   +.+++.
T Consensus       241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~  320 (393)
T d1i24a_         241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKK  320 (393)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCE
T ss_pred             hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcce
Confidence                 013456788889999999999999999999999988766554433333445899999999998864   444444


Q ss_pred             ee
Q 039623          239 TY  240 (292)
Q Consensus       239 ~~  240 (292)
                      ..
T Consensus       321 ~~  322 (393)
T d1i24a_         321 MT  322 (393)
T ss_dssp             EE
T ss_pred             ee
Confidence            43

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=2.1e-29  Score=216.04  Aligned_cols=230  Identities=17%  Similarity=0.192  Sum_probs=176.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh----hhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI----FKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |+|||||||||||++|+++|++.||+|++++|..... ....+.+..    ....+++++.+|+.|...+.....+++.|
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~v   95 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV   95 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHHhhhhcccCCeeEEeecccccccccccccccccc
Confidence            6899999999999999999999999999999854322 222222221    23467999999999999998888899999


Q ss_pred             EEcCcCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCcc---CCccCCCCcchHHHHHHHH
Q 039623           78 ISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVDR---SQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        78 i~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~~---~~~~~~~~~~~~~~K~~~e  135 (292)
                      +|+++...               +.++.+++++|++++ ++++|+    ++||.....   ++.+..|.+.|..+|..+|
T Consensus        96 ~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  174 (341)
T d1sb8a_          96 LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE  174 (341)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             ccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHH
Confidence            99998654               789999999999998 889987    346643221   1566667777666999999


Q ss_pred             HHHHH----cCccEEEEecceeccccccccccC-CC------CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc
Q 039623          136 RAIEA----EGIQYTYVSCNCFAGYFLPTLAQI-GA------PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR  204 (292)
Q Consensus       136 ~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~  204 (292)
                      +++..    .+++++++||+.++|......... .+      ....++++.+.++|.+.++|+|++|+|.++..++..+.
T Consensus       175 ~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~  254 (341)
T d1sb8a_         175 LYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGL  254 (341)
T ss_dssp             HHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccc
Confidence            98864    579999999887776532211110 00      11456678899999999999999999999999887653


Q ss_pred             -CCCceEEEcCCCccccHHHHHHHHHHHhCC
Q 039623          205 -TLNKTLYIRPPGNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       205 -~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~  234 (292)
                       ..+++|++.. +...|+.|+++.+.+.++.
T Consensus       255 ~~~~~~~~~~~-~~~~si~~i~~~i~~~~~~  284 (341)
T d1sb8a_         255 DARNQVYNIAV-GGRTSLNQLFFALRDGLAE  284 (341)
T ss_dssp             GGCSEEEEESC-SCCEEHHHHHHHHHHHHHH
T ss_pred             cccceeeeecc-cccchHHHHHHHHHHHhcc
Confidence             4566777764 4599999999999998874

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-28  Score=211.02  Aligned_cols=241  Identities=20%  Similarity=0.197  Sum_probs=174.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-----CCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--c
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-----DPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--Q   73 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~   73 (292)
                      -+||||||||||||++|+++|+++|++|++++|.....     .++..+.+......+++++.+|++|.+.+.+++.  +
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            05799999999999999999999999999998632221     1223344455667899999999999999999887  4


Q ss_pred             CCEEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC----CccCCCCcchHHH
Q 039623           74 VDVVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS----QNVVEPAKSAYAD  130 (292)
Q Consensus        74 ~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~----~~~~~~~~~~~~~  130 (292)
                      +++++|+|+...               +.++.+++++|++.+ ++++++ |   .||......    .....+.++|..+
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~  160 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS  160 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccccccccccccCChHHHH
Confidence            678999999765               678999999999998 999887 2   244432211    2223345566669


Q ss_pred             HHHHHHHHHH-----cCccEEEEecceeccccccccccCC---CC-----------CCCCCceeec------CCCcceEE
Q 039623          131 KIKIRRAIEA-----EGIQYTYVSCNCFAGYFLPTLAQIG---AP-----------APPREKVTIF------GDGNAGAV  185 (292)
Q Consensus       131 K~~~e~~~~~-----~~~~~~~ir~~~~~~~~~~~~~~~~---~~-----------~~~~~~~~~~------~~~~~~~~  185 (292)
                      |...|+.+.+     .+++++++|++.++|...+......   ..           ...+..+.++      .++.+.++
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd  240 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence            9999988764     4789999998888875322111000   00           0123333433      45778899


Q ss_pred             eeccchHHHHHHHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCH
Q 039623          186 YNKEDDIATYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE  243 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  243 (292)
                      |+|++|+|.++..++...  ...+++||+++. ..+|+.|+++.+.+.+|.+.++...+.
T Consensus       241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~-~~~s~~dl~~~i~~~~~~~~~~~~~~~  299 (346)
T d1ek6a_         241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-TGYSVLQMVQAMEKASGKKIPYKVVAR  299 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-CCEEHHHHHHHHHHHHCSCCCEEEECC
T ss_pred             EEEEEeccchhhhhccccccccCceEEEeCCC-CcccHHHHHHHHHHHhCCCCCeEECCC
Confidence            999999999988876432  334568888765 499999999999999998877766554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=4.3e-29  Score=212.13  Aligned_cols=230  Identities=13%  Similarity=0.085  Sum_probs=174.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHc--cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      |+|||||||||||++|++.|+++||+|++++|..+..   +...++.+ ...+++++.+|++|.+.+.+.+.  .+++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~---~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD---TRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC---CCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc---cHHHHHHhcccCCcEEEEccccChHHhhhhhccccccccc
Confidence            6899999999999999999999999999999986532   22333333 25679999999999999998887  478888


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCcc---CCccCCCCcchHHHHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDR---SQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~---~~~~~~~~~~~~~~K~~~e~  136 (292)
                      |+++...               +.++.+++++|++.+..+++++ |   .||.....   ++.+..|.++|..+|.+.|+
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  157 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW  157 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHH
Confidence            9887765               6789999999999984446665 2   24433221   15566677777779999999


Q ss_pred             HHHH----cCccEEEEecceeccccc-cccc-----cCCC-CCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          137 AIEA----EGIQYTYVSCNCFAGYFL-PTLA-----QIGA-PAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       137 ~~~~----~~~~~~~ir~~~~~~~~~-~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      ++..    .+++++++||+.++|+.. +...     .... ....+.+....+++++.++|+|++|+|+++..+++++. 
T Consensus       158 ~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~-  236 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK-  236 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC-
Confidence            8864    689999999877776532 1110     0000 01334556678999999999999999999999998764 


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhCCCcc
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIGKTLE  237 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~  237 (292)
                       ++.|++.+.+ ..|+.++++.+.+..|.+.+
T Consensus       237 -~~~~ni~~~~-~~s~~~~~~~~~~~~~~~~~  266 (321)
T d1rpna_         237 -ADDYVVATGV-TTTVRDMCQIAFEHVGLDYR  266 (321)
T ss_dssp             -CCCEEECCSC-EEEHHHHHHHHHHTTTCCGG
T ss_pred             -cCCceecccc-cceehhhhHHHHHHhCCCcc
Confidence             4678888665 99999999999999887543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=3.9e-28  Score=208.52  Aligned_cols=239  Identities=18%  Similarity=0.225  Sum_probs=169.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |.|||||||||||++|++.|+++|++|++++|..... .+...........+++++.+|++|.+.+..++.  ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcc-hhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            5699999999999999999999999999998754432 333333455567789999999999999999887  7999999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCc-------cCCccCCCCcchHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVD-------RSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~-------~~~~~~~~~~~~~~~K~~  133 (292)
                      +|+...               +.++.+++++|++.+ ++++|+    ++||....       .++.+..|.++|..+|..
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~  159 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA  159 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHH
Confidence            999765               678999999999998 999987    34664321       114455566666669999


Q ss_pred             HHHHHHH------cCccEEEEecceeccccccccccCC-------C-------CCCCCCceeecCCC------cceEEee
Q 039623          134 IRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIG-------A-------PAPPREKVTIFGDG------NAGAVYN  187 (292)
Q Consensus       134 ~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~~~------~~~~~~i  187 (292)
                      +|+++..      .+++++++||+.+++..........       +       ......++.+++++      ...++++
T Consensus       160 ~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~  239 (347)
T d1z45a2         160 IENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYI  239 (347)
T ss_dssp             HHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEE
T ss_pred             HHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeee
Confidence            9998864      4689999997777653211100000       0       00123344455543      4566777


Q ss_pred             ccchHHHHHHHhhcC------CcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecCH
Q 039623          188 KEDDIATYTINSIDG------PRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVAE  243 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~------~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  243 (292)
                      ++.|.+.+++.+++.      ....+++||+.+ ++.+|+.|+++.+.+.+|.+.++...+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~  300 (347)
T d1z45a2         240 HVVDLAKGHIAALQYLEAYNENEGLCREWNLGS-GKGSTVFEVYHAFCKASGIDLPYKVTGR  300 (347)
T ss_dssp             EHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTCCCCC-----
T ss_pred             eeecccccccccccccccccccccccccceecC-CCcccHHHHHHHHHHHHCCCCceEeCCC
Confidence            777788888777653      223457788865 4599999999999999998877655443

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.96  E-value=2.6e-27  Score=205.94  Aligned_cols=239  Identities=17%  Similarity=0.213  Sum_probs=169.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHh-CCCCEEEEecCCCCC----CCcchh-hHhh----------hhcCCcEEEECCCCCHH
Q 039623            2 AATLIIGGTGYIGKKILEASVK-AGHPTFALVRESTAS----DPVKGK-LIEI----------FKNLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~----~~~~~~-~~~~----------~~~~~v~~v~~D~~d~~   65 (292)
                      |||||||||||||++|+++|++ .||+|+++++-....    ..+..+ ....          ....++.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            6999999999999999999986 689999998521110    011111 1111          12346899999999999


Q ss_pred             HHHHHHc---cCCEEEEcCcCCC---------------chhHHHHHHHHHHhCCcceeec----cCCCCCCc--------
Q 039623           66 SLIKAIK---QVDVVISTVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLP----SEFGNDVD--------  115 (292)
Q Consensus        66 ~~~~~~~---~~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~----s~~g~~~~--------  115 (292)
                      .+.++++   ++|+|||+|+...               +.++.++++++++.+ ++++++    +.|+....        
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccccccccccc
Confidence            9999986   5799999999765               678999999999998 888775    23332211        


Q ss_pred             --cCCccCCCCcchHHHHHHHHHHHHH----cCccEEEEecceeccccccccccCC------------------------
Q 039623          116 --RSQNVVEPAKSAYADKIKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQIG------------------------  165 (292)
Q Consensus       116 --~~~~~~~~~~~~~~~K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~~------------------------  165 (292)
                        ..+.+..|.++|..+|...|++++.    .+++++++||+.++|+.........                        
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~  241 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence              0145556777777799999998874    6899999998888775332111000                        


Q ss_pred             ----CCCCCCCceeecC------CCcceEEeeccchHHHHHHHhhcCC--------cCCCceEEEcCCCccccHHHHHHH
Q 039623          166 ----APAPPREKVTIFG------DGNAGAVYNKEDDIATYTINSIDGP--------RTLNKTLYIRPPGNVYSFNELVTL  227 (292)
Q Consensus       166 ----~~~~~~~~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~--------~~~~~~~~~~~~~~~~t~~e~~~~  227 (292)
                          ......+++.+.+      +|.+.++|+|++|+|+++..+++..        ...+++||+++ +..+|+.|+++.
T Consensus       242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s-~~~~s~~el~~~  320 (383)
T d1gy8a_         242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT-SRGYSVREVIEV  320 (383)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC-SCCEEHHHHHHH
T ss_pred             chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCC-CCceeHHHHHHH
Confidence                0112334445544      5788999999999999999988632        22346777764 459999999999


Q ss_pred             HHHHhCCCcceeecC
Q 039623          228 WENKIGKTLEKTYVA  242 (292)
Q Consensus       228 ~~~~~~~~~~~~~~~  242 (292)
                      +.+..|.+..+...+
T Consensus       321 i~~~~~~~~~~~~~~  335 (383)
T d1gy8a_         321 ARKTTGHPIPVRECG  335 (383)
T ss_dssp             HHHHHCCCCCEEEEC
T ss_pred             HHHHhCCCCceEECC
Confidence            999999877665543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.7e-28  Score=205.87  Aligned_cols=238  Identities=18%  Similarity=0.143  Sum_probs=175.6

Q ss_pred             ceE-EEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH----hhhhcCCcEEEECCCCCHHHHHHHHc--cC
Q 039623            2 AAT-LIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI----EIFKNLGVNVLYGDLQDHESLIKAIK--QV   74 (292)
Q Consensus         2 ~~v-lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~v~~v~~D~~d~~~~~~~~~--~~   74 (292)
                      ||| ||||||||||++|+++|+++||+|++++|.++..+..+.+.+    ......+++++.+|++|.+.+..++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            688 999999999999999999999999999997654433343322    11224578999999999999999987  68


Q ss_pred             CEEEEcCcCCC---------------chhHHHHHHHHHHhC--Ccceeec----cCCCCCCcc---CCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ---------------IPEQAKIIAAVKEAG--NVKRFLP----SEFGNDVDR---SQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~---------------~~~~~~l~~a~~~~~--~~~~~i~----s~~g~~~~~---~~~~~~~~~~~~~~  130 (292)
                      ++++|+++...               +.++.+++++|++++  +.++||+    ++||.....   ++.+..|.++|..+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            89999998765               568899999999987  1236776    347753322   15566677777779


Q ss_pred             HHHHHHHHHH----cCccEEEEecceecccccc-ccccCC------CCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFLP-TLAQIG------APAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|+++..    .+++++++||+.++|+... ......      .......+....+++++.++++|++|+++++..+
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~  240 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM  240 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHH
Confidence            9999998864    5899999998777775211 110000      0013455677889999999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +++...  +.+++.. ....+.++....+...++..+.....+
T Consensus       241 ~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (347)
T d1t2aa_         241 LQNDEP--EDFVIAT-GEVHSVREFVEKSFLHIGKTIVWEGKN  280 (347)
T ss_dssp             HHSSSC--CCEEECC-SCCEEHHHHHHHHHHHTTCCEEEESCG
T ss_pred             hhcCCC--ccceecc-ccccccchhhhhhhhhhcceeeecccc
Confidence            988653  3556654 448899999999999988876544433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.95  E-value=6.5e-27  Score=201.03  Aligned_cols=232  Identities=13%  Similarity=0.141  Sum_probs=174.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH-HHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH-ESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~-~~~~~~~~~~d~vi~~   80 (292)
                      |+|+|||||||||++++++|+++||+|++++|+++     +..........+++++.+|+.|. +.+..++.++|++++.
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-----~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~   78 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN   78 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC-----SHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcc-----hhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEee
Confidence            57999999999999999999999999999999843     32222223456899999999985 5577788899999988


Q ss_pred             CcCCC---chhHHHHHHHHHHhCCcce-eeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEEEecceeccc
Q 039623           81 VSRGQ---IPEQAKIIAAVKEAGNVKR-FLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTYVSCNCFAGY  156 (292)
Q Consensus        81 a~~~~---~~~~~~l~~a~~~~~~~~~-~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~ir~~~~~~~  156 (292)
                      .....   +..+.+++++|.+.+ +++ +++|+.+.....   ...+..+++.+|...+.++.+.+++++++||+.|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~---~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_          79 TTSQAGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLY---GPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGT---SSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGG
T ss_pred             cccccchhhhhhhHHHHHHHHhC-CCceEEEeeccccccC---CcccchhhhhhHHHHHHHHHhhccCceeeeeceeecc
Confidence            76544   778899999999999 554 555665533222   2234567778999999999999999999999999987


Q ss_pred             cccccccCCC-CCCCC--CceeecCCCcceEEeecc-chHHHHHHHhhcCC--cCCCceEEEcCCCccccHHHHHHHHHH
Q 039623          157 FLPTLAQIGA-PAPPR--EKVTIFGDGNAGAVYNKE-DDIATYTINSIDGP--RTLNKTLYIRPPGNVYSFNELVTLWEN  230 (292)
Q Consensus       157 ~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~i~v-~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~t~~e~~~~~~~  230 (292)
                      +......... .....  ........++..++++++ +|+++++..++.++  ...|+.|++.+  +.+|+.|+++.+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g--~~~T~~eia~~l~~  232 (350)
T d1xgka_         155 FTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF--ETLSPVQVCAAFSR  232 (350)
T ss_dssp             CBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS--EEECHHHHHHHHHH
T ss_pred             ccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC--CcCCHHHHHHHHHH
Confidence            5432211110 00111  123445567778888876 79999999999754  24577777763  47999999999999


Q ss_pred             HhCCCcceeecCHH
Q 039623          231 KIGKTLEKTYVAEE  244 (292)
Q Consensus       231 ~~~~~~~~~~~~~~  244 (292)
                      ++|+++++..+|.+
T Consensus       233 ~~G~~v~~~~vp~~  246 (350)
T d1xgka_         233 ALNRRVTYVQVPKV  246 (350)
T ss_dssp             HHTSCEEEEECSSC
T ss_pred             HHCCcceEEECCHH
Confidence            99999999988864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.95  E-value=3e-27  Score=201.74  Aligned_cols=237  Identities=15%  Similarity=0.171  Sum_probs=171.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHcc--CCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIKQ--VDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~~--~d~vi   78 (292)
                      .||||||||||||++|+++|+++|++|+++++-..   ..+.+.+..+ ...+++++.+|++|.+.+.+++++  +|+||
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~---~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSR---KGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS---TTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCc---ccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEE
Confidence            38999999999999999999999999999986432   2222222222 346899999999999999999984  69999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCccee-eccC----CCCCCcc-------------------CCc
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRF-LPSE----FGNDVDR-------------------SQN  119 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~-i~s~----~g~~~~~-------------------~~~  119 (292)
                      |+|+...               +.++.+++++|.+.+ ++++ ++|+    ++.....                   ...
T Consensus        78 h~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (338)
T d1orra_          78 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST  156 (338)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             eecccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCC
Confidence            9999765               679999999999998 6654 4432    1111000                   022


Q ss_pred             cCCCCcchHHHHHHHHHHHH----HcCccEEEEec-ceecccccccccc--------CC--CCCCCCCceeecCCCcceE
Q 039623          120 VVEPAKSAYADKIKIRRAIE----AEGIQYTYVSC-NCFAGYFLPTLAQ--------IG--APAPPREKVTIFGDGNAGA  184 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~----~~~~~~~~ir~-~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~  184 (292)
                      +..|.+.|..+|...|.++.    ..+.....+|+ +++++...+....        ..  .....++++.+.+++.+.+
T Consensus       157 ~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  236 (338)
T d1orra_         157 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  236 (338)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence            33344455568988888765    36788888874 4444432221110        00  0113466788999999999


Q ss_pred             EeeccchHHHHHHHhhcCCc-CCCceEEEc-CCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          185 VYNKEDDIATYTINSIDGPR-TLNKTLYIR-PPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       185 ~~i~v~D~a~~~~~~l~~~~-~~~~~~~~~-~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +|+|++|++++++.++++.. ..++++++. +.+..+++.|+++.+.+..+.+.++...+
T Consensus       237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~  296 (338)
T d1orra_         237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP  296 (338)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCC
Confidence            99999999999999998753 456788875 44567899999999999999877766655

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=4.5e-27  Score=201.00  Aligned_cols=232  Identities=15%  Similarity=0.118  Sum_probs=166.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh----hhhcCCcEEEECCCCCHHHHHHHHc--cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE----IFKNLGVNVLYGDLQDHESLIKAIK--QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~v~~v~~D~~d~~~~~~~~~--~~d   75 (292)
                      |++||||||||||++|+++|+++||+|++++|..+..+..+.+.+.    ......++++.+|+++.+.+.+.++  ++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            5799999999999999999999999999999976543344433222    2234568999999999999999886  689


Q ss_pred             EEEEcCcCCC---------------chhHHHHHHHHHHhC----Ccceeec-c-C--CCCCCc--cCCccCCCCcchHHH
Q 039623           76 VVISTVSRGQ---------------IPEQAKIIAAVKEAG----NVKRFLP-S-E--FGNDVD--RSQNVVEPAKSAYAD  130 (292)
Q Consensus        76 ~vi~~a~~~~---------------~~~~~~l~~a~~~~~----~~~~~i~-s-~--~g~~~~--~~~~~~~~~~~~~~~  130 (292)
                      +|||+|+...               +.++.++++++++..    ...++++ | +  ++....  .++.+..|.+.|..+
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~s  161 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAS  161 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHH
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhHH
Confidence            9999999865               566888888887653    1224444 2 1  222211  115566676677779


Q ss_pred             HHHHHHHHHH----cCccEEEEecceeccccccc-cccCCC------CCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          131 KIKIRRAIEA----EGIQYTYVSCNCFAGYFLPT-LAQIGA------PAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       131 K~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |...|+++..    .+++++++||+.++|+..+. .....+      ...........+++.+.++++|++|+|+++..+
T Consensus       162 K~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~  241 (339)
T d1n7ha_         162 KCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLM  241 (339)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHH
Confidence            9999988753    68999999988877753221 100000      002344456678899999999999999999999


Q ss_pred             hcCCcCCCceEEEcCCCccccHHHHHHHHHHHhCCCc
Q 039623          200 IDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIGKTL  236 (292)
Q Consensus       200 l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~  236 (292)
                      ++++..  ..+++.. +...+..++++.+.+.++...
T Consensus       242 ~~~~~~--~~~~~~~-~~~~s~~~~~~~~~~~~~~~~  275 (339)
T d1n7ha_         242 LQQEKP--DDYVVAT-EEGHTVEEFLDVSFGYLGLNW  275 (339)
T ss_dssp             HTSSSC--CEEEECC-SCEEEHHHHHHHHHHHTTCCG
T ss_pred             HhcCCC--Ccccccc-ccccccchhhhhhhhhhhccc
Confidence            998753  3445543 448999999999999998654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.95  E-value=4.3e-28  Score=201.93  Aligned_cols=215  Identities=15%  Similarity=0.141  Sum_probs=164.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |||||||||||||++|+++|.++||+|++++|+                       ..|+.|.+++.++++  ++|+|||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~-----------------------~~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech-----------------------hccCCCHHHHHHHHHHcCCCEEEe
Confidence            779999999999999999999999999999987                       358999999999997  6899999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeecc---CCCCCCc---cCCccCCCCcchHHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPS---EFGNDVD---RSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s---~~g~~~~---~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      +++...               +.....+++.+...+ ...++.|   .|+....   .+..+..|...|..+|...|+++
T Consensus        59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~  137 (281)
T d1vl0a_          59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  137 (281)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             eccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHHH
Confidence            999876               456667777777766 4444433   2333221   11444455555666999999999


Q ss_pred             HHcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEEcCCCcc
Q 039623          139 EAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYIRPPGNV  218 (292)
Q Consensus       139 ~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~  218 (292)
                      ++.+.+++++||+.++|...............+....+.+  ++.++++|++|+++++..++++..  .+.||+.+++ .
T Consensus       138 ~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~~-~  212 (281)
T d1vl0a_         138 KALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCKG-I  212 (281)
T ss_dssp             HHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCBS-C
T ss_pred             HHhCCCccccceeEEeCCCcccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCCC-c
Confidence            9999999999999998864332111110112344455554  578999999999999999998764  4588888666 8


Q ss_pred             ccHHHHHHHHHHHhCCCcceeecCHHH
Q 039623          219 YSFNELVTLWENKIGKTLEKTYVAEEK  245 (292)
Q Consensus       219 ~t~~e~~~~~~~~~~~~~~~~~~~~~~  245 (292)
                      +|+.|+++.+.+.+|.+.++..++..+
T Consensus       213 ~s~~e~~~~i~~~~g~~~~i~~i~~~~  239 (281)
T d1vl0a_         213 CSWYDFAVEIFRLTGIDVKVTPCTTEE  239 (281)
T ss_dssp             EEHHHHHHHHHHHHCCCCEEEEECSTT
T ss_pred             cchHHHHHHHHHHhCCCceEEeccHHH
Confidence            999999999999999998888777544

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=4.2e-27  Score=191.58  Aligned_cols=214  Identities=16%  Similarity=0.147  Sum_probs=154.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCC--EEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHP--TFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+||||||||||||+++++.|+++|++  |+++.|+     +++...    ...+++++.+|+.|.+++.++++++|+||
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~-----~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   73 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKEK----IGGEADVFIGDITDADSINPAFQGIDALV   73 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESC-----HHHHHH----TTCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCC-----HHHHHh----ccCCcEEEEeeeccccccccccccceeeE
Confidence            899999999999999999999999976  5556676     433322    24689999999999999999999999999


Q ss_pred             EcCcCCC----------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH
Q 039623           79 STVSRGQ----------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        79 ~~a~~~~----------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |+++...                            +.+++++++.+.... .+.+.+ +..+...........+...+..
T Consensus        74 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  152 (252)
T d2q46a1          74 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNILV  152 (252)
T ss_dssp             ECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGGGGGGCCHHH
T ss_pred             EEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccccccccchhh
Confidence            9998643                            457889999988887 676665 4443332221112222334444


Q ss_pred             HHHHHHHHHHHcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCce
Q 039623          130 DKIKIRRAIEAEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKT  209 (292)
Q Consensus       130 ~K~~~e~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  209 (292)
                      .+...+.+....+++++++||+.++|+........     ......   ......++||++|+|++++.++++++..+++
T Consensus       153 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~-----~~~~~~---~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~  224 (252)
T d2q46a1         153 WKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELL-----VGKDDE---LLQTDTKTVPRADVAEVCIQALLFEEAKNKA  224 (252)
T ss_dssp             HHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEE-----EESTTG---GGGSSCCEEEHHHHHHHHHHHTTCGGGTTEE
T ss_pred             hhhhhhhhhhcccccceeecceEEECCCcchhhhh-----hccCcc---cccCCCCeEEHHHHHHHHHHHhCCccccCcE
Confidence            77788888888999999999999988743221110     000000   1123457899999999999999998888899


Q ss_pred             EEEcCCC--ccccHHHHHHHHHHHh
Q 039623          210 LYIRPPG--NVYSFNELVTLWENKI  232 (292)
Q Consensus       210 ~~~~~~~--~~~t~~e~~~~~~~~~  232 (292)
                      |++++..  ...+++|+.+.+.++.
T Consensus       225 ~~i~~~~~~~~~~~~~~~~lf~~i~  249 (252)
T d2q46a1         225 FDLGSKPEGTSTPTKDFKALFSQVT  249 (252)
T ss_dssp             EEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred             EEEeeCCCCCChhHHHHHHHHHHHH
Confidence            9997533  2456778877776543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.94  E-value=1.5e-27  Score=204.41  Aligned_cols=224  Identities=15%  Similarity=0.082  Sum_probs=158.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-----hcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-----KNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      ++|||||||||||++|++.|+++|++|++++|+     .++.+.+...     .......+.+|+.|.+.+.+++.++|+
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC-----chhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchh
Confidence            589999999999999999999999999999998     4444333322     122345688999999999999999999


Q ss_pred             EEEcCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCCC---CC--cc---------------------C
Q 039623           77 VISTVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFGN---DV--DR---------------------S  117 (292)
Q Consensus        77 vi~~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~---~~--~~---------------------~  117 (292)
                      |+|+++...            +.++.+++++|.+.+.++++|+ |+...   ..  ..                     .
T Consensus        87 v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e  166 (342)
T d1y1pa1          87 VAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE  166 (342)
T ss_dssp             EEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred             hhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccc
Confidence            999999765            6789999999998754899887 44211   00  00                     0


Q ss_pred             CccCCCCcchHHHHHHHHHHHH----Hc--CccEEEEecceeccccccccccCC-----CCC-CCCCceeecCCCcceEE
Q 039623          118 QNVVEPAKSAYADKIKIRRAIE----AE--GIQYTYVSCNCFAGYFLPTLAQIG-----APA-PPREKVTIFGDGNAGAV  185 (292)
Q Consensus       118 ~~~~~~~~~~~~~K~~~e~~~~----~~--~~~~~~ir~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~  185 (292)
                      ..+..|..+|..+|..+|+++.    +.  +++++++||+.++|+.........     ... ..+... ....+++.++
T Consensus       167 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~-~~~~~~~~~~  245 (342)
T d1y1pa1         167 SDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS-PALALMPPQY  245 (342)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCC-HHHHTCCSEE
T ss_pred             cCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcC-cccCCcccee
Confidence            1222333445559999998664    33  467888899888775322111100     000 122222 2223456789


Q ss_pred             eeccchHHHHHHHhhcCCcCCCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          186 YNKEDDIATYTINSIDGPRTLNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                      |+|++|+|++++.+++++...+ .+++..+ ..+|++|+++.+.+.++
T Consensus       246 ~v~v~Dva~~~i~~l~~~~~~g-~~~~~~~-~~~t~~eia~~i~k~~p  291 (342)
T d1y1pa1         246 YVSAVDIGLLHLGCLVLPQIER-RRVYGTA-GTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCS-CEEEECC-EEECHHHHHHHHHHHCT
T ss_pred             eeeHHHHHHHHHHhhcCccccc-eEEEEcC-CceEHHHHHHHHHHHcC
Confidence            9999999999999999876655 4566544 49999999999998863

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-26  Score=188.35  Aligned_cols=191  Identities=16%  Similarity=0.117  Sum_probs=141.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|||||||||+|++++++|+++|  ++|++++|++.....        ....+++...+|+.+.+++.+++.++|+|||
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~--------~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--------EAYKNVNQEVVDFEKLDDYASAFQGHDVGFC   86 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--------GGGGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc--------cccceeeeeeecccccccccccccccccccc
Confidence            579999999999999999999998  489999998654311        1245788899999999999999999999999


Q ss_pred             cCcCCC------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCcc-E
Q 039623           80 TVSRGQ------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQ-Y  145 (292)
Q Consensus        80 ~a~~~~------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~-~  145 (292)
                      ++|...            +..+.+++++|.+.+ +++|++ |+.+.....       ...|..+|..+|+.+.+.+.+ +
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~~-------~~~Y~~~K~~~E~~l~~~~~~~~  158 (232)
T d2bkaa1          87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSS-------NFLYLQVKGEVEAKVEELKFDRY  158 (232)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC-------SSHHHHHHHHHHHHHHTTCCSEE
T ss_pred             cccccccccchhhhhhhcccccceeeecccccC-ccccccCCccccccCc-------cchhHHHHHHhhhccccccccce
Confidence            998754            678899999999998 999998 665543332       345666999999999998875 8


Q ss_pred             EEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcCCCceEEE
Q 039623          146 TYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRTLNKTLYI  212 (292)
Q Consensus       146 ~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  212 (292)
                      +|+||+.++|..........   +....+............|+++|+|++++.++.++.. ++.+.+
T Consensus       159 ~IlRP~~i~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~  221 (232)
T d2bkaa1         159 SVFRPGVLLCDRQESRPGEW---LVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELL  221 (232)
T ss_dssp             EEEECCEEECTTGGGSHHHH---HHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEE
T ss_pred             EEecCceeecCCCcCcHHHH---HHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEE
Confidence            99999999987432110000   0000111222333344569999999999999887654 444444

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3.3e-25  Score=187.44  Aligned_cols=217  Identities=18%  Similarity=0.218  Sum_probs=162.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |||||||||||||++|+++|+++|+.|+++++..                      ..|+.|.+.+.++++  ++|.|+|
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~d~v~~   60 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVYL   60 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhcCCCEEEE
Confidence            5799999999999999999999999988775541                      258889999988887  5899999


Q ss_pred             cCcCCC----------------chhHHHHHHHHHHhCCcceeec-c---CCCCCCccC-------CccCCCCc-chHHHH
Q 039623           80 TVSRGQ----------------IPEQAKIIAAVKEAGNVKRFLP-S---EFGNDVDRS-------QNVVEPAK-SAYADK  131 (292)
Q Consensus        80 ~a~~~~----------------~~~~~~l~~a~~~~~~~~~~i~-s---~~g~~~~~~-------~~~~~~~~-~~~~~K  131 (292)
                      +|+...                +.++.+++++|++.+ +++||+ |   +||......       +.+..+.+ +|..+|
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  139 (315)
T d1e6ua_          61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK  139 (315)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred             cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHH
Confidence            997654                678999999999998 999987 3   466432210       11222223 455599


Q ss_pred             HHHHHHHHH----cCccEEEEecceeccccccccccC-C-----------CCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          132 IKIRRAIEA----EGIQYTYVSCNCFAGYFLPTLAQI-G-----------APAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       132 ~~~e~~~~~----~~~~~~~ir~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ..+|+++..    .+++++++||+.++|+........ .           .....+..+.+.+++.+.++++|++|++.+
T Consensus       140 ~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~  219 (315)
T d1e6ua_         140 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  219 (315)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHH
Confidence            999998863    589999999888887532111000 0           011446677888999999999999999999


Q ss_pred             HHHhhcCCc--------CCCceEEEcCCCccccHHHHHHHHHHHhCCCcceeecC
Q 039623          196 TINSIDGPR--------TLNKTLYIRPPGNVYSFNELVTLWENKIGKTLEKTYVA  242 (292)
Q Consensus       196 ~~~~l~~~~--------~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~  242 (292)
                      +..++....        .....+++. .+...+..++++.+.+.+|.+..+...+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~~~~~~~~i~~~~  273 (315)
T d1e6ua_         220 SIHVMELAHEVWLENTQPMLSHINVG-TGVDCTIRELAQTIAKVVGYKGRVVFDA  273 (315)
T ss_dssp             HHHHHHSCHHHHHHTSBTTBCCEEES-CSCCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred             HHHhhhhccccccccccccccccccC-CCcchHHHHHHHHHHHHhCCCcceEECC
Confidence            999997642        123456665 4458999999999999999887765543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.92  E-value=1.3e-24  Score=186.68  Aligned_cols=235  Identities=14%  Similarity=0.106  Sum_probs=165.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCcEEEECCCCCHHHHHHHHc--cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGVNVLYGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      |||||||||||||++|+++|+++|++|++++|+.... +.   .++.. ..++++++.+|++|++.+.++++  .+|+|+
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PS---LFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SC---HHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc-HH---HHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            6899999999999999999999999999999985433 11   11111 24579999999999999999987  589999


Q ss_pred             EcCcCCC---------------chhHHHHHHHHHHhCCcceeeccC----CCCCC----ccCCccCCCCcchHHHHHHHH
Q 039623           79 STVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPSE----FGNDV----DRSQNVVEPAKSAYADKIKIR  135 (292)
Q Consensus        79 ~~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s~----~g~~~----~~~~~~~~~~~~~~~~K~~~e  135 (292)
                      |+|+...               +.++.+++++|++.+..+.+++++    +....    ...+.+..|.++|..+|...|
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e  164 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  164 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccch
Confidence            9999765               667999999999987345555422    11111    111444455566666998888


Q ss_pred             HHHHH-------------cCccEEEEecceeccccc-c--ccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          136 RAIEA-------------EGIQYTYVSCNCFAGYFL-P--TLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       136 ~~~~~-------------~~~~~~~ir~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      ..+..             .+++++++||+.++|+.. .  .+.........++.....+.+.+.++++|++|++.++..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~  244 (356)
T d1rkxa_         165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL  244 (356)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred             hhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhh
Confidence            76652             467899999887766431 1  1110000013345556788889999999999999999998


Q ss_pred             hcCCcCC----CceEEE-cCCCccccHHHHHHHHHHHhCCCcceee
Q 039623          200 IDGPRTL----NKTLYI-RPPGNVYSFNELVTLWENKIGKTLEKTY  240 (292)
Q Consensus       200 l~~~~~~----~~~~~~-~~~~~~~t~~e~~~~~~~~~~~~~~~~~  240 (292)
                      +.+....    +...+. .+....++..++++.+.+..+.+..+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  290 (356)
T d1rkxa_         245 AQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL  290 (356)
T ss_dssp             HHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC
T ss_pred             hhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEE
Confidence            8764321    222222 2345578999999999999987766543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=6.4e-24  Score=169.42  Aligned_cols=175  Identities=14%  Similarity=0.100  Sum_probs=122.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi   78 (292)
                      |||||||||||||++++++|+++|+  +|++++|++...            .+.+   ..+..|..++.+.+. ++|+||
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~~---~~~~~d~~~~~~~~~~~~d~vi   67 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRL---DNPVGPLAELLPQLDGSIDTAF   67 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTE---ECCBSCHHHHGGGCCSCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------cccc---cccccchhhhhhccccchheee
Confidence            6899999999999999999999997  566667763321            1222   344445444444443 689999


Q ss_pred             EcCcCCC-------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCc-
Q 039623           79 STVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGI-  143 (292)
Q Consensus        79 ~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~-  143 (292)
                      ||+|...             +..+.+++++|++.+ ++++++ |+.+.....       .+.|..+|..+|+.+.+.+. 
T Consensus        68 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~~-------~~~y~~~K~~~E~~l~~~~~~  139 (212)
T d2a35a1          68 CCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAKS-------SIFYNRVKGELEQALQEQGWP  139 (212)
T ss_dssp             ECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC-------SSHHHHHHHHHHHHHTTSCCS
T ss_pred             eeeeeeccccccccccccchhhhhhhccccccccc-cccccccccccccccc-------ccchhHHHHHHhhhccccccc
Confidence            9998764             678899999999998 999987 766654332       34555599999999998887 


Q ss_pred             cEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          144 QYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       144 ~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      +++++||+.++|+.........   . ...+....  ...+.+||++|+|++++.+++++..
T Consensus       140 ~~~I~Rp~~v~G~~~~~~~~~~---~-~~~~~~~~--~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         140 QLTIARPSLLFGPREEFRLAEI---L-AAPIARIL--PGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             EEEEEECCSEESTTSCEEGGGG---T-TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             cceeeCCcceeCCcccccHHHH---H-HHHHhhcc--CCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            4999999999987433221111   1 11111111  1234669999999999999987653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.89  E-value=5.1e-23  Score=172.06  Aligned_cols=207  Identities=15%  Similarity=0.199  Sum_probs=144.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      |||||||||||||++|++.|.+.|+. ++++++...                   +.+|++|.+.+.++++  ++|+|||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~~~D~Vih   60 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE-------------------FCGDFSNPKGVAETVRKLRPDVIVN   60 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc-------------------ccCcCCCHHHHHHHHHHcCCCEEEE
Confidence            77999999999999999999998874 455554211                   2579999999999997  5799999


Q ss_pred             cCcCCC---------------chhHHHHHHHHHHhCCcceeeccC---CCCCCc---cCCccCCCCcchHHHHHHHHHHH
Q 039623           80 TVSRGQ---------------IPEQAKIIAAVKEAGNVKRFLPSE---FGNDVD---RSQNVVEPAKSAYADKIKIRRAI  138 (292)
Q Consensus        80 ~a~~~~---------------~~~~~~l~~a~~~~~~~~~~i~s~---~g~~~~---~~~~~~~~~~~~~~~K~~~e~~~  138 (292)
                      +||...               +..+.+++++|++.+ ++.+++|+   |+....   .+..+..|.+.|+.+|..+|+++
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~  139 (298)
T d1n2sa_          61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL  139 (298)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             ecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhH
Confidence            998654               678899999999887 66555432   332211   11455556677777999999999


Q ss_pred             HHcCccEEEEecce-eccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC---CcCCCceEEEcC
Q 039623          139 EAEGIQYTYVSCNC-FAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG---PRTLNKTLYIRP  214 (292)
Q Consensus       139 ~~~~~~~~~ir~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~~~~~~  214 (292)
                      ........++|++. +++..................+...  ++...+++++.|+++++..++..   ....+++||+++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~  217 (298)
T d1n2sa_         140 QDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVA  217 (298)
T ss_dssp             HHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCC
T ss_pred             HhhhcccccccccceeeccCCccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccC
Confidence            98777777776444 4333221111100000122233333  35688999999999998887752   234567888886


Q ss_pred             CCccccHHHHHHHHHHHh
Q 039623          215 PGNVYSFNELVTLWENKI  232 (292)
Q Consensus       215 ~~~~~t~~e~~~~~~~~~  232 (292)
                      ++ .++..|+++.+.+..
T Consensus       218 ~~-~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         218 GG-TTTWHDYAALVFDEA  234 (298)
T ss_dssp             BS-CEEHHHHHHHHHHHH
T ss_pred             CC-ceecHHHHHHHHhhh
Confidence            66 899999999887754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=3.4e-21  Score=161.42  Aligned_cols=216  Identities=13%  Similarity=0.123  Sum_probs=134.1

Q ss_pred             EEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHH-HHHH-----ccCCE
Q 039623            4 TLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESL-IKAI-----KQVDV   76 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~-~~~~-----~~~d~   76 (292)
                      |||||||||||++|+++|+++|+ +|+++++-..   ..+..   .+..    ....|..+.+.+ ...+     ..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~---~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD---GTKFV---NLVD----LNIADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS---GGGGH---HHHT----SCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCC---cchhh---cccc----cchhhhccchHHHHHHhhhhcccchhh
Confidence            89999999999999999999995 7999875422   11121   1111    112233333332 2222     36899


Q ss_pred             EEEcCcCCC-------------chhHHHHHHHHHHhCCcceeeccC---CCCCCc---cCCccCCCCcchHHHHHHHHHH
Q 039623           77 VISTVSRGQ-------------IPEQAKIIAAVKEAGNVKRFLPSE---FGNDVD---RSQNVVEPAKSAYADKIKIRRA  137 (292)
Q Consensus        77 vi~~a~~~~-------------~~~~~~l~~a~~~~~~~~~~i~s~---~g~~~~---~~~~~~~~~~~~~~~K~~~e~~  137 (292)
                      |+|+|+...             +..+.+++++++..+ ++.+++|+   ++....   ..+.+..|.+.|..+|...|.+
T Consensus        72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~  150 (307)
T d1eq2a_          72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY  150 (307)
T ss_dssp             EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred             hhhhccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccchhhhh
Confidence            999998654             678889999999998 88766632   222111   1133334555666699999998


Q ss_pred             HHH----cCccEEEEecceeccccccccccC-CC-----CC-CCCC-ceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          138 IEA----EGIQYTYVSCNCFAGYFLPTLAQI-GA-----PA-PPRE-KVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       138 ~~~----~~~~~~~ir~~~~~~~~~~~~~~~-~~-----~~-~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      ++.    .+++++++||..++|+........ .+     .. ..++ .....+++...++++|++|++.++..+++++. 
T Consensus       151 ~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-  229 (307)
T d1eq2a_         151 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  229 (307)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-
T ss_pred             ccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-
Confidence            875    589999999888877532211100 00     00 1222 23345778889999999999999999998753 


Q ss_pred             CCceEEEcCCCccccHHHHHHHHHHHhC
Q 039623          206 LNKTLYIRPPGNVYSFNELVTLWENKIG  233 (292)
Q Consensus       206 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~  233 (292)
                       .+.|++.++. ..|++|+++.+.+..+
T Consensus       230 -~~~~~~~~~~-~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         230 -SGIFNLGTGR-AESFQAVADATLAYHK  255 (307)
T ss_dssp             -CEEEEESCSC-CBCHHHHHHHC-----
T ss_pred             -cccccccccc-chhHHHHHHHHHHhcC
Confidence             5678887555 9999999999987654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.78  E-value=1.3e-17  Score=134.68  Aligned_cols=188  Identities=13%  Similarity=0.085  Sum_probs=135.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|+++|++|.+.+|+     +++.+.+......+..++.+|++|++++.++++       .+
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998     666655544445678899999999998887774       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~~  129 (292)
                      |++||+||...                       +..++.++..+++.+ -.++|. |+ .+.....      ....|..
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~------~~~~Y~a  154 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV------ACHGYTA  154 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------TBHHHHH
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccc------cccchhh
Confidence            99999999865                       344556666667766 467776 43 3322111      1234444


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|+.++.+.+.       .|+++..|.||.+-..........    ....         ....+..++|+|.+++.++.+
T Consensus       155 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----~~~~---------pl~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         155 TKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----IFQT---------ALGRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----CSCC---------SSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----HHhc---------cccCCCCHHHHHHHHHHHhCh
Confidence            99999888774       579999999998876654332221    1111         112356889999999999975


Q ss_pred             Cc--CCCceEEEcC
Q 039623          203 PR--TLNKTLYIRP  214 (292)
Q Consensus       203 ~~--~~~~~~~~~~  214 (292)
                      ..  ..|+.+.+.|
T Consensus       222 ~s~~itG~~i~vDG  235 (244)
T d1nffa_         222 ESSYSTGAEFVVDG  235 (244)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             hhCCCcCCEEEECC
Confidence            42  3467777764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.75  E-value=5.5e-17  Score=131.43  Aligned_cols=196  Identities=13%  Similarity=0.008  Sum_probs=127.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |.++||||++.||+.+++.|.++|++|.+.+|+..    +..+........++..+.+|++|++++.++++       ++
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~----~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA----PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch----HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            56999999999999999999999999999999742    12221122234578899999999998887764       68


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCc-chHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAK-SAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~-~~~~  129 (292)
                      |++|||||...                       +..++.++..+++.+ -.++|. |+.......      |.. .|..
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~------~~~~~Y~a  154 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI------EAYTHYIS  154 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC------SSCHHHHH
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccC------cccccchh
Confidence            99999999865                       445666777777776 567765 332221111      233 4444


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..|.||++.............    ....  .........+..++|+|++++.++.+
T Consensus       155 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~----~~~~--~~~~~~l~r~~~pedvA~~v~fL~S~  228 (247)
T d2ew8a1         155 TKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM----FDVL--PNMLQAIPRLQVPLDLTGAAAFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CTTSSSCSCCCTHHHHHHHHHHTSG
T ss_pred             hhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchh----HHHH--HHHhccCCCCCCHHHHHHHHHHHhCc
Confidence            99998888764       57999999999987654322111100    0000  00001122356789999999999975


Q ss_pred             Cc--CCCceEEEcC
Q 039623          203 PR--TLNKTLYIRP  214 (292)
Q Consensus       203 ~~--~~~~~~~~~~  214 (292)
                      ..  ..|+.+.+.|
T Consensus       229 ~s~~itG~~i~vDG  242 (247)
T d2ew8a1         229 DASFITGQTLAVDG  242 (247)
T ss_dssp             GGTTCCSCEEEESS
T ss_pred             hhcCCcCCeEEECC
Confidence            43  2467777764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.75  E-value=2.8e-17  Score=133.49  Aligned_cols=195  Identities=14%  Similarity=0.072  Sum_probs=133.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|+++|++|.+.+|+     .++.+.+.......+..+.+|++|++++.++++       .+
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           6 KTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            579999999999999999999999999999998     565544444445678999999999998888774       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                       +..++.++..+++.+ -.++|. |+.......     .....|..+
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~-----~~~~~Y~as  154 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGL-----ALTSSYGAS  154 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTCHHHHHH
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccc-----cchhhHHHH
Confidence            99999999765                       345566666666666 577776 443222221     112344449


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEe-eccchHHHHHHHhhcC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVY-NKEDDIATYTINSIDG  202 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~l~~  202 (292)
                      |..++.+.+.       .|+++..|.||++-............. ......+       ...+ ...+|+|.+++.++.+
T Consensus       155 Kaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~-~~~~~~p-------l~R~g~~PedvA~~v~fL~S~  226 (254)
T d1hdca_         155 KWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE-GNYPNTP-------MGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST-TSCTTST-------TSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHH-HHHhCCC-------CCCCCCCHHHHHHHHHHHhch
Confidence            9999888774       579999999999876543322111100 0000010       0112 2469999999999975


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      ..  ..|+.+.+.|.
T Consensus       227 ~a~~itG~~i~vDGG  241 (254)
T d1hdca_         227 TSSYVTGAELAVDGG  241 (254)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhCCCCCceEEeCCC
Confidence            42  34778888753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=4.1e-18  Score=137.77  Aligned_cols=195  Identities=13%  Similarity=0.110  Sum_probs=136.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|+++|++|.+.+|+     .++.+.+......+...+.+|++|++++.++++       ++
T Consensus         5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           5 KIALVTGASRGIGRAIAETLAARGAKVIGTATS-----ENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            579999999999999999999999999999998     666665555556678899999999988877775       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++||+||...                       +..++.++..+++.+ -.++|. |+.......     +....|..+
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~-----~~~~~Y~as  153 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGN-----GGQANYAAA  153 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCHHHHHH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCC-----CCCHHHHHH
Confidence            99999998765                       445666667767666 467776 432211111     112345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..|.||.+-..........        .............+...+|+|+++..++.+.
T Consensus       154 Kaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~--------~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  225 (243)
T d1q7ba_         154 KAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD--------QRAGILAQVPAGRLGGAQEIANAVAFLASDE  225 (243)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--------HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh--------HHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            9999888774       589999999999876533221110        0000000111223567899999999999754


Q ss_pred             c--CCCceEEEcCC
Q 039623          204 R--TLNKTLYIRPP  215 (292)
Q Consensus       204 ~--~~~~~~~~~~~  215 (292)
                      .  ..|+.+.+.|.
T Consensus       226 s~~itGq~i~vdGG  239 (243)
T d1q7ba_         226 AAYITGETLHVNGG  239 (243)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCCcCCeEEECCC
Confidence            3  35777887653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.6e-17  Score=133.14  Aligned_cols=195  Identities=14%  Similarity=0.110  Sum_probs=130.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |++|||||++.||+++++.|.++|++|.+.+|+     .++.+.+... ..++..+.+|++|+++++++++   ++|++|
T Consensus         8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~l~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVRE-CPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEEeCCCHHHHHHHHHHhCCceEEE
Confidence            589999999999999999999999999999998     5555443332 3578999999999999999887   589999


Q ss_pred             EcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH-HHHH
Q 039623           79 STVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA-DKIK  133 (292)
Q Consensus        79 ~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-~K~~  133 (292)
                      |+||...                       +..++.++..+.+.+.-.+++. |+.......      |....|. +|..
T Consensus        82 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------~~~~~Y~asKaa  155 (244)
T d1pr9a_          82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------TNHSVYCSTKGA  155 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------TTBHHHHHHHHH
T ss_pred             eccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc------cchhhhhhhHHH
Confidence            9999765                       2344555554333321356665 333222211      2344454 9999


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--  204 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--  204 (292)
                      ++.+.+.       .|+++..|.||.+...........      ...............+...+|+|.+++.++.+..  
T Consensus       156 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~------~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  229 (244)
T d1pr9a_         156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD------PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGM  229 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS------HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC------hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            8888774       579999999999876543221110      0000000011112245788999999999997543  


Q ss_pred             CCCceEEEcC
Q 039623          205 TLNKTLYIRP  214 (292)
Q Consensus       205 ~~~~~~~~~~  214 (292)
                      ..|+.+.+.|
T Consensus       230 itG~~i~vDG  239 (244)
T d1pr9a_         230 TTGSTLPVEG  239 (244)
T ss_dssp             CCSCEEEEST
T ss_pred             cCCcEEEECc
Confidence            3467777764

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.73  E-value=3.1e-17  Score=132.85  Aligned_cols=196  Identities=17%  Similarity=0.184  Sum_probs=130.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |++|||||++.||+++++.|.++|++|.+.+|+     +++.+..+   ..+...+.+|++|++++.++++       ++
T Consensus         6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~-----~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLR-----PEGKEVAE---AIGGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----TTHHHHHH---HHTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998     44444333   3367889999999988877764       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH-H
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY-A  129 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~-~  129 (292)
                      |++||+||...                       +..++.++..+++.+ -.++|. ++.......      |....| .
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~------~~~~~Y~a  150 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE------QENAAYNA  150 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC------TTBHHHHH
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccc------cccchhHH
Confidence            99999999755                       344555556666555 467776 332222221      234444 4


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      +|..++.+.+.       .|+++..|.||.+-...........   ...+. ...+.+......+...+|+|.+++.++.
T Consensus       151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S  227 (248)
T d2d1ya1         151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALS---PDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-----------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcC---CCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999888763       5899999999998765332211110   00000 0001111112245678999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      +..  ..|+.+.+.|.
T Consensus       228 ~~s~~itG~~i~vDGG  243 (248)
T d2d1ya1         228 EKASFITGAILPVDGG  243 (248)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             chhcCCCCcEEEcCcC
Confidence            542  34677888653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.73  E-value=9.4e-18  Score=136.29  Aligned_cols=195  Identities=12%  Similarity=0.138  Sum_probs=130.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||++.||+.+++.|+++|++|.+.+|+     .++.+.. +++   ...++..+.+|++|++++.++++     
T Consensus         6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN-----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     5544222 222   24568889999999988887774     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        ++|++|||||...                       +..++.++..+++.+ -.++|. ++ .+.....      +..
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~------~~~  153 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM------PNI  153 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS------SSC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccC------ccc
Confidence              5899999999755                       344555666666555 456665 33 3322221      233


Q ss_pred             -chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 -SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 -~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                       .|..+|..++.+.+.       .|+++..|.||++-..........      .+....+........+..++|+|++++
T Consensus       154 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~------~~~~~~~~~~~pl~R~~~pedvA~~v~  227 (251)
T d1vl8a_         154 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD------PEKLDYMLKRIPLGRTGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC------HHHHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred             cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC------HHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence             444599999888764       589999999999976543222110      000000000011123467899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++.+..  ..|+.+.+.|
T Consensus       228 fL~S~~a~~itG~~i~vDG  246 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDG  246 (251)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhCCCcCcEEEeCc
Confidence            9997543  2467777764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.72  E-value=1.8e-17  Score=135.15  Aligned_cols=204  Identities=13%  Similarity=0.140  Sum_probs=132.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|+++|++|.+.+|+     .++.+.+......++..+.+|++|++++.++++       .+
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           6 KTALITGSARGIGRAFAEAYVREGARVAIADIN-----LEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            469999999999999999999999999999998     666655544446788999999999999888775       58


Q ss_pred             CEEEEcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH-
Q 039623           75 DVVISTVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA-  129 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-  129 (292)
                      |++||+||...                   +.+    ++.++..+.+.+.-.++|. |+.......      |....|. 
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------~~~~~Y~a  154 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE------ALVGVYCA  154 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------TTCHHHHH
T ss_pred             cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc------ccccchhh
Confidence            99999999755                   233    3334443333331356765 443322221      2344454 


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCC--CCCCCCCc-eeecCCCcceEEeeccchHHHHHHHh
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG--APAPPREK-VTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      +|..++.+.+.       .|+++..|.||++-...........  ........ ...+........+...+|+|.+++.+
T Consensus       155 sKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL  234 (256)
T d1k2wa_         155 TKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHT
T ss_pred             hhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            99999888764       5799999999988765432111100  00000000 00000000112356789999999999


Q ss_pred             hcCCc--CCCceEEEcCCC
Q 039623          200 IDGPR--TLNKTLYIRPPG  216 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~~  216 (292)
                      +....  ..|+.+.+.|..
T Consensus       235 ~S~~a~~iTG~~i~vDGG~  253 (256)
T d1k2wa_         235 ATPEADYIVAQTYNVDGGN  253 (256)
T ss_dssp             TSGGGTTCCSCEEEESTTS
T ss_pred             hCchhCCccCceEEECcch
Confidence            86543  247788887643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.72  E-value=4.7e-17  Score=132.23  Aligned_cols=196  Identities=13%  Similarity=0.054  Sum_probs=131.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|+++|++|.+.+|+     .++.+.+......+..++.+|++|++++.++++       .+
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998     666655544446678899999999988877765       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcc-hH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKS-AY  128 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~-~~  128 (292)
                      |++||+||...                       +..++.++..+++.+  .++|. |+ .+....       |... |.
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--G~Iv~isS~~~~~~~-------~~~~~Y~  152 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPI-------EQYAGYS  152 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCC-------TTBHHHH
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--CceecccchhhhcCc-------ccccccc
Confidence            99999999765                       334555555555444  56665 43 332211       2334 44


Q ss_pred             HHHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          129 ADKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       129 ~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      .+|..++.+.+.         +++++..|.||.+-...........   ...+.............+...+|+|++++.+
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch---hhHHHHHhCccccccCCCCCHHHHHHHHHHH
Confidence            499998877762         2488899999998765432221110   0000011111111122467789999999999


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +.+..  ..|+.+.+.|
T Consensus       230 ~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         230 ASDESSVMSGSELHADN  246 (253)
T ss_dssp             HSGGGTTCCSCEEEESS
T ss_pred             hChhhCCCcCcEEEECc
Confidence            97543  2467777764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.72  E-value=4.6e-17  Score=130.93  Aligned_cols=185  Identities=14%  Similarity=0.087  Sum_probs=127.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+...             ..++..+.+|++|++++.++++       ++
T Consensus         8 K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            679999999999999999999999999999998432             2356789999999998887765       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH-
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA-  129 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-  129 (292)
                      |++|||||...                       +..++.++..+++.+ -.++|. |+.......      +....|. 
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~------~~~~~Y~a  147 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI------GNQANYAA  147 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----------CCHHHHH
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCC------cccHHHHH
Confidence            99999999765                       345666677777777 567776 443322221      2334454 


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..|.||.+............        ............+...+|+|++++.++.+
T Consensus       148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~--------~~~~~~~~pl~R~~~pedvA~~v~fL~S~  219 (237)
T d1uzma1         148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERI--------QQGALQFIPAKRVGTPAEVAGVVSFLASE  219 (237)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHH--------HHHHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHH--------HHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999888764       5799999999998765332211100        00000001112346789999999999975


Q ss_pred             Cc--CCCceEEEcC
Q 039623          203 PR--TLNKTLYIRP  214 (292)
Q Consensus       203 ~~--~~~~~~~~~~  214 (292)
                      ..  ..|+.+.+.|
T Consensus       220 ~s~~itG~~i~vdG  233 (237)
T d1uzma1         220 DASYISGAVIPVDG  233 (237)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             hhcCCcCCeEEECC
Confidence            43  2467777764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.72  E-value=2.2e-17  Score=134.91  Aligned_cols=202  Identities=12%  Similarity=0.115  Sum_probs=130.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh----hhhcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE----IFKNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||++.||+++++.|+++|++|.+.+|+.    .++.+.+.    .....++.++.+|++|++++.++++     
T Consensus         5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~----~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD----AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC----HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc----HHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5699999999999999999999999999999973    22232222    2234578899999999999888775     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-c-CCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-S-EFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s-~~g~~~~~~~~~~~~~~  125 (292)
                        ++|++||+||...                       +..++.++..+++.+ -.++|. | ..+.. ..     +...
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~-~~-----~~~~  153 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV-AS-----ANKS  153 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-CC-----TTCH
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeeccccccee-cc-----CCcc
Confidence              5899999999765                       445667777777776 567765 3 33322 21     1123


Q ss_pred             chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCC--CCCc--eeecCCCcceEEeeccchHHH
Q 039623          126 SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAP--PREK--VTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       126 ~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      .|..+|..++.+.+.       .|+++..|.||++-...............  ....  ...+........+...+|+|+
T Consensus       154 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~  233 (260)
T d1x1ta1         154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHH
T ss_pred             hhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            454599999888774       57999999999987664433222110000  0000  000000011224578899999


Q ss_pred             HHHHhhcCCc--CCCceEEEcC
Q 039623          195 YTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +++.++.+..  ..|+.+.+.|
T Consensus       234 ~v~fL~S~~a~~itG~~i~vDG  255 (260)
T d1x1ta1         234 TAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhChhhCCCcCCEEEECc
Confidence            9999997543  3467777764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=3.3e-17  Score=132.31  Aligned_cols=195  Identities=14%  Similarity=0.139  Sum_probs=129.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |++|||||++.||+++++.|.++|++|.+.+|+     .++.+.+... ..++..+.+|++|++++.++++   ++|++|
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAKE-CPGIEPVCVDLGDWDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEEeCCCHHHHHHHHHHcCCCeEEE
Confidence            679999999999999999999999999999998     5555443322 3578999999999999999987   589999


Q ss_pred             EcCcCCC-------------------chh----HHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHH-HHHH
Q 039623           79 STVSRGQ-------------------IPE----QAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYA-DKIK  133 (292)
Q Consensus        79 ~~a~~~~-------------------~~~----~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-~K~~  133 (292)
                      ||||...                   +.+    ++.++..+.+.+.-.++|. ++.......      |....|. +|..
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------~~~~~Y~asKaa  153 (242)
T d1cyda_          80 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------PNLITYSSTKGA  153 (242)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------TTBHHHHHHHHH
T ss_pred             ECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC------CccccccchHHH
Confidence            9999755                   223    3334443333331345665 443222221      2334444 9999


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--  204 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--  204 (292)
                      ++.+.+.       .|+++..|.||++-..........      .+.............+..++|+|++++.++.+..  
T Consensus       154 l~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~------~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~  227 (242)
T d1cyda_         154 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD------PEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS  227 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC------HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9888874       579999999999876533221100      0000000000111235678999999999997542  


Q ss_pred             CCCceEEEcC
Q 039623          205 TLNKTLYIRP  214 (292)
Q Consensus       205 ~~~~~~~~~~  214 (292)
                      ..|+++.+.|
T Consensus       228 itG~~i~vDG  237 (242)
T d1cyda_         228 TSGGGILVDA  237 (242)
T ss_dssp             CCSSEEEEST
T ss_pred             cCCceEEeCc
Confidence            2467787765

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=4.6e-17  Score=132.59  Aligned_cols=202  Identities=16%  Similarity=0.172  Sum_probs=129.7

Q ss_pred             ce-EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AA-TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~-vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      || ++||||++.||+++++.|.++|++|.+.+|+     +++.+.+. ++.  ..++..+.+|++|++++.++++     
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT   75 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46 4999999999999999999999999999998     65554332 222  3467889999999998888764     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++|||||...                       +..++.++..+.+.+.-.+++. |+.......      |...
T Consensus        76 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------~~~~  149 (255)
T d1gega_          76 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------PELA  149 (255)
T ss_dssp             TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------TTBH
T ss_pred             hCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC------cccc
Confidence              5899999999765                       2334455555455542345554 443222221      3445


Q ss_pred             hHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCC---CCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          127 AYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG---APAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       127 ~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      .|. +|..++.+.+.       .|+++..|.||.+-...........   ...........+........+...+|+|++
T Consensus       150 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~  229 (255)
T d1gega_         150 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAAC  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             cchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHH
Confidence            555 99999888764       5899999999998654322111000   000000000000111112235678999999


Q ss_pred             HHHhhcCCc--CCCceEEEcC
Q 039623          196 TINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~  214 (292)
                      ++.++.+..  ..|+.+.+.|
T Consensus       230 v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         230 VSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHhCchhCCccCcEEEecC
Confidence            999997543  2467777764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.5e-18  Score=139.25  Aligned_cols=208  Identities=13%  Similarity=0.076  Sum_probs=132.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h----hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F----KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~----~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |++|||||++.||+++++.|.++|++|.+.+|+     .++.+.... +    ...++..+.+|++|++++.++++    
T Consensus         4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWN-----LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   78 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     555433222 2    23468899999999998888774    


Q ss_pred             ---cCCEEEEcCcCCC---------------chhHHHHHHHHHHhC--Ccceeec-cCCCCCCccCCccCCCCcc-hHHH
Q 039623           73 ---QVDVVISTVSRGQ---------------IPEQAKIIAAVKEAG--NVKRFLP-SEFGNDVDRSQNVVEPAKS-AYAD  130 (292)
Q Consensus        73 ---~~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~--~~~~~i~-s~~g~~~~~~~~~~~~~~~-~~~~  130 (292)
                         ++|++||+||...               +..++.++..+.+.+  .-.++|. |+.......      |... |..+
T Consensus        79 ~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~------~~~~~Y~as  152 (254)
T d2gdza1          79 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------AQQPVYCAS  152 (254)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------TTCHHHHHH
T ss_pred             HcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC------CCccchHHH
Confidence               5899999999876               334555555554432  1134665 433222111      2334 4449


Q ss_pred             HHHHHHHHH---------HcCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          131 KIKIRRAIE---------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       131 K~~~e~~~~---------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      |..++.+.+         ..|+++..|.||.+-.................+....+.+.-....+...+|+|++++.++.
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  232 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHc
Confidence            998877654         25789999999998655432221100000000000000000011234678999999999998


Q ss_pred             CCcCCCceEEEcCCCccccH
Q 039623          202 GPRTLNKTLYIRPPGNVYSF  221 (292)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~t~  221 (292)
                      ++...|+.+.+.|.. .+.+
T Consensus       233 ~~~itG~~i~VdGG~-~~~~  251 (254)
T d2gdza1         233 DDALNGAIMKITTSK-GIHF  251 (254)
T ss_dssp             CTTCSSCEEEEETTT-EEEE
T ss_pred             CCCCCCCEEEECCCC-eeec
Confidence            765567888887654 4443

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.71  E-value=3.8e-17  Score=133.18  Aligned_cols=202  Identities=13%  Similarity=0.105  Sum_probs=131.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h----hcCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F----KNLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~----~~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |+++||||++.||+.+++.|.++|++|.+.+|+     .++.+.... +    .+.++..+.+|++|++++.++++    
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     655433322 1    23467889999999999887764    


Q ss_pred             ---cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                         ++|++|||||...                        +..++.++..+++.+ -.++|. |+.......      |.
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~------~~  152 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI------GN  152 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC------SS
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCC------CC
Confidence               5899999999643                        334555556666655 466765 433222221      23


Q ss_pred             c-chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          125 K-SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       125 ~-~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      . .|..+|..+..+.+.       .|+++..|.||.+.......................+........+...+|+|.++
T Consensus       153 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v  232 (258)
T d1iy8a_         153 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV  232 (258)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            3 444499998888763       58999999999987653322211100000000000000111122356789999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++.+..  ..|+.+.+.|.
T Consensus       233 ~fL~S~~s~~itG~~i~VDGG  253 (258)
T d1iy8a_         233 AFLLSDDASYVNATVVPIDGG  253 (258)
T ss_dssp             HHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhcCCcCceEEcCcc
Confidence            99997542  24677888754

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=2.1e-16  Score=128.84  Aligned_cols=193  Identities=14%  Similarity=0.123  Sum_probs=121.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||++.||+.+++.|+++|++|++.+|+     .++.+.+ +.+.  ..++..+.+|++|++++.++++      
T Consensus         9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN-----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     5554333 2222  3468899999999988777653      


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        .+|++||+||...                       +..++.++..+++.+ -.++|. |+ .+....       +..
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~-------~~~  155 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSA-------SVG  155 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------------C
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccc-------ccc
Confidence              3899999999765                       344566666667666 567766 33 332221       233


Q ss_pred             chHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..|. +|..++.+.+.       .|+++..|.||++-...........       .............+...+|+|.+++
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~-------~~~~~~~~~pl~R~~~pedvA~~v~  228 (259)
T d1xq1a_         156 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE-------FKKVVISRKPLGRFGEPEEVSSLVA  228 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHHHH
T ss_pred             ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH-------HHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            4454 99999888774       5899999999998765432221110       0001111111234568899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++.+..  ..|+.+.+.|
T Consensus       229 fL~S~~s~~iTG~~i~vDG  247 (259)
T d1xq1a_         229 FLCMPAASYITGQTICVDG  247 (259)
T ss_dssp             HHTSGGGTTCCSCEEECCC
T ss_pred             HHhCchhcCCcCcEEEeCC
Confidence            9996542  2466666654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.71  E-value=7.4e-17  Score=130.19  Aligned_cols=191  Identities=14%  Similarity=0.057  Sum_probs=127.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+.+++.|.++|++|.+.+|+     .++.+...  ...+...+.+|++|++++.++++       .+
T Consensus         6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREAA--EAVGAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHH--HTTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH--HHcCCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            569999999999999999999999999999998     55554333  24578899999999999887764       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                      |++|||||...                       +..++.++..+++.+ -..++. |+.+.. .     .+....|..+
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~~~-~-----~~~~~~Y~as  151 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYL-G-----NLGQANYAAS  151 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGGG-C-----CTTCHHHHHH
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecccccc-C-----CCCCcchHHH
Confidence            99999999765                       233444555555444 344444 332211 1     1123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..++.+.+.       .|+++..|.||.+-..........        .............+...+|+|++++.++.+.
T Consensus       152 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~--------~~~~~~~~~pl~R~~~pedia~~v~fL~S~~  223 (242)
T d1ulsa_         152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK--------VREKAIAATPLGRAGKPLEVAYAALFLLSDE  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH--------HHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHHHhchh
Confidence            9999888774       579999999998875533221110        0000000011223457899999999999754


Q ss_pred             c--CCCceEEEcC
Q 039623          204 R--TLNKTLYIRP  214 (292)
Q Consensus       204 ~--~~~~~~~~~~  214 (292)
                      .  ..|+.+.+.|
T Consensus       224 s~~itG~~i~vDG  236 (242)
T d1ulsa_         224 SSFITGQVLFVDG  236 (242)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             hCCCCCcEEEECC
Confidence            3  2467777764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.71  E-value=7.1e-17  Score=132.49  Aligned_cols=197  Identities=14%  Similarity=0.117  Sum_probs=131.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |.++||||++.||+.+++.|+++|++|++.+|+     .++.+.+.. +. ...+.++.+|++|++++.++++       
T Consensus         7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999998     555543332 22 2347889999999999888774       


Q ss_pred             cCCEEEEcCcCCC-------------------------chhHHHHHHHHHHhCCcceeec-c-CCCCCCccCCccCCCCc
Q 039623           73 QVDVVISTVSRGQ-------------------------IPEQAKIIAAVKEAGNVKRFLP-S-EFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------------~~~~~~l~~a~~~~~~~~~~i~-s-~~g~~~~~~~~~~~~~~  125 (292)
                      .+|++||+||...                         +..++.++..+++.+ -.++|. | ..+.....      +..
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~------~~~  154 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE------GVS  154 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT------TSC
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccccccc------ccc
Confidence            5899999998643                         334555566665555 455554 3 33322221      234


Q ss_pred             chHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceee--cCCCcceEEeeccchHHHH
Q 039623          126 SAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTI--FGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       126 ~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~D~a~~  195 (292)
                      .+|. +|..++.+.+.       .|+++..|.||++-..........     .......  .........+...+|+|++
T Consensus       155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~~~~~gr~~~pedvA~~  229 (268)
T d2bgka1         155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-----DSSRVEELAHQAANLKGTLLRAEDVADA  229 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-----CHHHHHHHHHHTCSSCSCCCCHHHHHHH
T ss_pred             cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcC-----CHHHHHHHHHhccccCCCCcCHHHHHHH
Confidence            4666 99999888774       589999999998876543322111     0000000  0000011235678999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++.+..  ..|+.+.+.|.
T Consensus       230 v~fL~S~~s~~itGq~i~VDGG  251 (268)
T d2bgka1         230 VAYLAGDESKYVSGLNLVIDGG  251 (268)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhChhhCCccCceEEECcC
Confidence            999997542  34778888754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.71  E-value=6e-17  Score=131.49  Aligned_cols=194  Identities=15%  Similarity=0.136  Sum_probs=127.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+     .++.+.+....  ..++.++.+|++|++++.++++       
T Consensus         7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999998     66554443332  3468899999999988877765       


Q ss_pred             cCCEEEEcCcCCC-------------------c----hhHHHHHHHHHHhCCcc-eeec-cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-------------------I----PEQAKIIAAVKEAGNVK-RFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~----~~~~~l~~a~~~~~~~~-~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++|++||+||...                   +    ..++.++..+++.+ .. ++|. |+.......      |....
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~-~gg~Ii~isS~~~~~~~------~~~~~  154 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGD------PSLGA  154 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCC------TTCHH
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC-CCCceEeeeccceeccC------CCchh
Confidence            5899999999865                   2    33444455555544 33 5554 443222221      23444


Q ss_pred             HH-HHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          128 YA-DKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       128 ~~-~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      |. +|..++.+.+.         .|+++..|.||.+-...........       .............+..++|+|.+++
T Consensus       155 Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~-------~~~~~~~~~pl~R~~~pedvA~~v~  227 (251)
T d1zk4a1         155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-------EAMSQRTKTPMGHIGEPNDIAYICV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-------HHHTSTTTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH-------HHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            55 99987766542         4689999999998765332221100       0000000011123567899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++.+..  ..|+.+.+.|
T Consensus       228 fL~S~~s~~itG~~i~vDG  246 (251)
T d1zk4a1         228 YLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhCCCcCcEEEECc
Confidence            9997543  2467777764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.5e-16  Score=132.15  Aligned_cols=198  Identities=8%  Similarity=0.051  Sum_probs=128.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh-------cCCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK-------NLGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-------~~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      |+++||||++.||+++++.|.++|++|++.+|+     .++.+... ++.       ..++..+.+|++|++++.++++ 
T Consensus        13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~-----~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1          13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRK-----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999998     55543322 221       3468889999999998887764 


Q ss_pred             ------cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeeccCCCCCCccCCccCCC
Q 039623           73 ------QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLPSEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ------~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~s~~g~~~~~~~~~~~~  123 (292)
                            ++|++||+||...                       +..++.++..+.+.+ -..+|.++.+....      .|
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~~------~~  160 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKAG------FP  160 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTTC------CT
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccccccc------cc
Confidence                  5899999998754                       233444555545554 35555422221111      13


Q ss_pred             CcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          124 AKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       124 ~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ...+|. +|..++.+.+.       .|+++..|.||.+.......................    .....+...+|+|.+
T Consensus       161 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~----~plgR~g~pedvA~~  236 (297)
T d1yxma1         161 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK----IPAKRIGVPEEVSSV  236 (297)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----STTSSCBCTHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc----CCCCCCcCHHHHHHH
Confidence            445555 99999888774       579999999999865432111100000000000000    011235678999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++.+..  ..|+++.+.|.
T Consensus       237 v~fL~Sd~s~~iTG~~i~VDGG  258 (297)
T d1yxma1         237 VCFLLSPAASFITGQSVDVDGG  258 (297)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhcCcCCcEEEeCcC
Confidence            999997543  24777888653

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=6.3e-17  Score=131.66  Aligned_cols=195  Identities=13%  Similarity=0.122  Sum_probs=131.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+     .++.+.+ +++.  ..++..+.+|++|++++.++++      
T Consensus        12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          12 KCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999998     5554333 2232  3468889999999988877764      


Q ss_pred             -cCCEEEEcCcCCC----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       ++|++||+||...                      +..++.++..+++.+ -.++|. |+.......      |....|
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~------~~~~~Y  159 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN------INMTSY  159 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC------TTCHHH
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccc------cccccc
Confidence             6899999999765                      344556666666666 455554 443222221      233445


Q ss_pred             H-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 A-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      . +|..++.+.+.       .|+++..|.||++-..........       +....+........+..++|+|++++.++
T Consensus       160 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------e~~~~~~~~~pl~R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP-------EIEQKMLQHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH-------HHHHHHHHTCSSCSCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            5 99998888764       579999999999865432211100       00000000111223467899999999999


Q ss_pred             cCCc--CCCceEEEcCC
Q 039623          201 DGPR--TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~--~~~~~~~~~~~  215 (292)
                      .+..  ..|+.+.+.|.
T Consensus       233 S~~s~~itG~~i~vDGG  249 (255)
T d1fmca_         233 SPAASWVSGQILTVSGG  249 (255)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CchhcCCcCCEEEECcC
Confidence            7543  35777888754

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.71  E-value=6.6e-17  Score=131.25  Aligned_cols=193  Identities=11%  Similarity=0.109  Sum_probs=130.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |.++||||++.||+++++.|.++|++|.+.+|+     .++.+.+. ++.  ..++..+.+|++|++++.++++      
T Consensus        11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999998     55543332 232  3358899999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-c-CCCCCCccCCccCCCCcc
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-S-EFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s-~~g~~~~~~~~~~~~~~~  126 (292)
                       .+|++||+||...                       +..++.++..+++.+ -.++|. | ..+.. ..     .....
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~-~~-----~~~~~  158 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT-GN-----VGQAN  158 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-CC-----TTCHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcC-CC-----CCCHH
Confidence             6899999999765                       345566666677666 577776 3 33321 11     11234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..++.+.+.       .|+++..|.||++-..........        ....+........+...+|+|.+++.+
T Consensus       159 Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~--------~~~~~~~~~pl~R~~~pedvA~~v~fL  230 (251)
T d2c07a1         159 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ--------IKKNIISNIPAGRMGTPEEVANLACFL  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH--------HHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            54599999888774       579999999999876543221110        000000111112356789999999999


Q ss_pred             hcCCc--CCCceEEEcC
Q 039623          200 IDGPR--TLNKTLYIRP  214 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~  214 (292)
                      +.+..  ..|+++.+.|
T Consensus       231 ~S~~s~~itG~~i~vDG  247 (251)
T d2c07a1         231 SSDKSGYINGRVFVIDG  247 (251)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCchhCCCcCcEEEECC
Confidence            97543  2467777764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.70  E-value=6.3e-17  Score=132.02  Aligned_cols=198  Identities=14%  Similarity=0.108  Sum_probs=130.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+.    .++.+. .+.+.  ...+..+.+|++|++++.++++      
T Consensus         8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~----~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK----EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5699999999999999999999999999999983    122222 22232  3357889999999998888775      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       ++|++||+||...                       +..++.++..+++.+.-..++. |+.......      |....
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~------~~~~~  157 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW------PLFVH  157 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------TTCHH
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC------ccccc
Confidence             5899999999765                       3456666666666662234554 443322221      33444


Q ss_pred             HH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          128 YA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       128 ~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |. +|..++.+.+.       .|+++..|.||.+...........      .+....+........+..++|+|++++.+
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~------~~~~~~~~~~~pl~R~~~pediA~~v~fL  231 (261)
T d1geea_         158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD------PEQRADVESMIPMGYIGEPEEIAAVAAWL  231 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS------HHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             cccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            55 99999888774       589999999999876543221100      00000000001112345789999999999


Q ss_pred             hcCCc--CCCceEEEcCC
Q 039623          200 IDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       200 l~~~~--~~~~~~~~~~~  215 (292)
                      +.+..  ..|+.+.+.|.
T Consensus       232 ~S~~s~~itG~~i~vDGG  249 (261)
T d1geea_         232 ASSEASYVTGITLFADGG  249 (261)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhcCCcCCeEEECCC
Confidence            97543  35778888753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.70  E-value=1.6e-16  Score=129.48  Aligned_cols=197  Identities=15%  Similarity=0.148  Sum_probs=127.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |++|||||++.||++++++|+++|++|++.+|+     +++.+.+. .+.  ...+..+.+|++|.+++.++++      
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     55543332 222  3457788999999998877663      


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        ..|+++|+||...                       +..++.++..+.+.+ ..++|+ |+ .+....       |..
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~-------~~~  153 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSAL-------PSV  153 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCC-------TTC
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccccccc-------ccc
Confidence              3799999999866                       234455555666666 567776 33 332221       244


Q ss_pred             chHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEeeccchHHHHH
Q 039623          126 SAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       126 ~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ..|. +|..++.+.+.       .|+++..|.||++............   ..... ............+...+|+|.++
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~plgR~~~pediA~~v  230 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN---PHQKEEIDNFIVKTPMGRAGKPQEVSALI  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh---hhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            5555 99999888874       5789999999998765433221110   00000 00000001122367899999999


Q ss_pred             HHhhcCCc--CCCceEEEcC
Q 039623          197 INSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~  214 (292)
                      +.++.+..  ..|+.+.+.|
T Consensus       231 ~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         231 AFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhChhhCCCcCcEEEeCC
Confidence            99996542  3466777764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.69  E-value=6.9e-16  Score=124.27  Aligned_cols=175  Identities=14%  Similarity=0.135  Sum_probs=123.5

Q ss_pred             ce-EEEEccCCcchHHHHHHHHhCCCC-------EEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHH
Q 039623            2 AA-TLIIGGTGYIGKKILEASVKAGHP-------TFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~-vlItGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~   70 (292)
                      |+ ||||||++.||+++++.|.++|++       |...+|+     .++.+.+.. +.  ...+..+.+|++|++++.++
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~   75 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRL   75 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            45 789999999999999999999987       8888888     665544332 32  23578899999999988877


Q ss_pred             Hc-------cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCc
Q 039623           71 IK-------QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        71 ~~-------~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~  119 (292)
                      ++       .+|++||+||...                       +..++.++..+++.+ -.++|. |+.......   
T Consensus        76 ~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~---  151 (240)
T d2bd0a1          76 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF---  151 (240)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCC---
Confidence            75       5899999999765                       456777777777776 466765 433222221   


Q ss_pred             cCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchH
Q 039623          120 VVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDI  192 (292)
Q Consensus       120 ~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  192 (292)
                        +....|..+|..++.+.+.       .|+++..|.||++-..+.......                 ....+...+|+
T Consensus       152 --~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------------~~~~~~~Pedv  212 (240)
T d2bd0a1         152 --RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------------MQALMMMPEDI  212 (240)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------------TGGGSBCHHHH
T ss_pred             --CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------------hHhcCCCHHHH
Confidence              1123444599998887764       578999999998876543221110                 01123567999


Q ss_pred             HHHHHHhhcCCc
Q 039623          193 ATYTINSIDGPR  204 (292)
Q Consensus       193 a~~~~~~l~~~~  204 (292)
                      |++++.++.++.
T Consensus       213 A~~v~~l~s~~~  224 (240)
T d2bd0a1         213 AAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHTSCT
T ss_pred             HHHHHHHHcCCc
Confidence            999999998754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.68  E-value=9.6e-17  Score=130.90  Aligned_cols=197  Identities=14%  Similarity=0.137  Sum_probs=129.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+     .++.+.+ +++.  ..++..+.+|++|++++.++++      
T Consensus         9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRN-----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     5554333 3333  3457888999999988877653      


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                        .+|++||+||...                       +..++.++..+++.+ -.++|. |+ .+....       |..
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~-------~~~  155 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAV-------PYE  155 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCC-------TTC
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccccccccccccc-------ccc
Confidence              3799999999755                       334555566666665 467766 33 332221       234


Q ss_pred             chH-HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHH
Q 039623          126 SAY-ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTI  197 (292)
Q Consensus       126 ~~~-~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  197 (292)
                      ..| .+|..++.+.+.       .|+++..|.||.+-...........   ...+....+-.......+..++|+|++++
T Consensus       156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~pl~R~g~pedvA~~v~  232 (259)
T d2ae2a_         156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP---EQKENLNKLIDRCALRRMGEPKELAAMVA  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH---HHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhch---hhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            445 499999888774       5789999999998755332211100   00000000000011123567899999999


Q ss_pred             HhhcCCc--CCCceEEEcC
Q 039623          198 NSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       198 ~~l~~~~--~~~~~~~~~~  214 (292)
                      .++.+..  ..|+.+.+.|
T Consensus       233 fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         233 FLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhCCCcCcEEEECC
Confidence            9997543  2467777764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.68  E-value=1.8e-16  Score=129.39  Aligned_cols=205  Identities=10%  Similarity=0.083  Sum_probs=128.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |++|||||++.||+++++.|.++|++|.+.+|+.... .+..+.+......++..+.+|++|++++.++++       .+
T Consensus        10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (260)
T d1h5qa_          10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA-VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   88 (260)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH-HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999984321 111111112234578899999999999888774       58


Q ss_pred             CEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCcc-CCccCCCCcchHH
Q 039623           75 DVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDR-SQNVVEPAKSAYA  129 (292)
Q Consensus        75 d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~-~~~~~~~~~~~~~  129 (292)
                      |++||+||...                       +..++.++..+.+.+.-..++. ++....... ......+....|.
T Consensus        89 DilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~  168 (260)
T d1h5qa_          89 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN  168 (260)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred             cEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchh
Confidence            99999998754                       3344555555544442344443 222111111 0001112344455


Q ss_pred             -HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          130 -DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       130 -~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                       +|..++.+.+.       .|+++..|.||.+-..........        ....+........+..++|+|.+++.++.
T Consensus       169 asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~--------~~~~~~~~~pl~R~g~pedvA~~v~fL~S  240 (260)
T d1h5qa_         169 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK--------IRDHQASNIPLNRFAQPEEMTGQAILLLS  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH--------HHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred             hhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence             99998888763       579999999999865533221110        00000000111235678999999999997


Q ss_pred             CCc--CCCceEEEcCC
Q 039623          202 GPR--TLNKTLYIRPP  215 (292)
Q Consensus       202 ~~~--~~~~~~~~~~~  215 (292)
                      +..  ..|+.+.+.|.
T Consensus       241 ~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         241 DHATYMTGGEYFIDGG  256 (260)
T ss_dssp             GGGTTCCSCEEEECTT
T ss_pred             chhCCCcCceEEECCC
Confidence            543  24677777653

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.1e-16  Score=129.72  Aligned_cols=197  Identities=13%  Similarity=0.135  Sum_probs=130.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|+++|++|.+.+|+     .++.+.+... ..++..+.+|++|++++.++++       ++
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998     6666554433 3578899999999998888775       58


Q ss_pred             CEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCcchH
Q 039623           75 DVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        75 d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~~~~  128 (292)
                      |++||+||...                        +..++.++..+++.+  .++|. |+ .+....      +....|.
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~~~~------~~~~~Y~  152 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAIGQ------AQAVPYV  152 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHHHCC------TTCHHHH
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCcccccccccccc------cCcchhH
Confidence            99999999643                        344555666666554  45554 33 321111      1133455


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCC-ceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPRE-KVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      .+|..++.+.+.       .|+++..|.||++-...........   .... .............+...+|+|.+++.++
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~  229 (250)
T d1ydea1         153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM---PDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA  229 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS---SSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcC---CCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            599999888764       5899999999998765332221110   0000 0000000011224568899999999998


Q ss_pred             cCCc-CCCceEEEcCC
Q 039623          201 DGPR-TLNKTLYIRPP  215 (292)
Q Consensus       201 ~~~~-~~~~~~~~~~~  215 (292)
                      .+.. ..|+.+.+.|.
T Consensus       230 Sda~~itG~~i~vDGG  245 (250)
T d1ydea1         230 SEANFCTGIELLVTGG  245 (250)
T ss_dssp             HHCTTCCSCEEEESTT
T ss_pred             CccCCCcCCeEEECCC
Confidence            6432 24677777653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.68  E-value=4.6e-16  Score=124.96  Aligned_cols=190  Identities=16%  Similarity=0.175  Sum_probs=127.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH-HHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH-ESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~-~~~~~~~~~~d~vi~~   80 (292)
                      |++|||||++.||+++++.|.++|++|.+.+|+     .++.      ...+.+++.+|+++. +.+.+.+..+|++||+
T Consensus         5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~-----~~~l------~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----EELL------KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHH------HHTCSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHH------HhcCCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            579999999999999999999999999999998     4333      345678899999863 5555666689999999


Q ss_pred             CcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHH
Q 039623           81 VSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRR  136 (292)
Q Consensus        81 a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~  136 (292)
                      ||...                       +..++.++..+++.+ -.++|. ++.......     .....|..+|..++.
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~-----~~~~~Y~asKaal~~  147 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPI-----ENLYTSNSARMALTG  147 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTBHHHHHHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccc-----cccccchhHHHHHHH
Confidence            99755                       345666666777666 456665 333222111     122344459999887


Q ss_pred             HHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CCC
Q 039623          137 AIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TLN  207 (292)
Q Consensus       137 ~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~  207 (292)
                      +.+.       .|+++..|.||++-..........       .....+........+...+|+|.+++.++.+..  ..|
T Consensus       148 ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~-------~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG  220 (234)
T d1o5ia_         148 FLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE-------EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTG  220 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH-------HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHhcccCeEEeecccCccchhhhhhhcCH-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcC
Confidence            7764       579999999998876543221110       000000111112245678999999999997543  247


Q ss_pred             ceEEEcCC
Q 039623          208 KTLYIRPP  215 (292)
Q Consensus       208 ~~~~~~~~  215 (292)
                      +++.+.|.
T Consensus       221 ~~i~vDGG  228 (234)
T d1o5ia_         221 QTIVVDGG  228 (234)
T ss_dssp             CEEEESTT
T ss_pred             cEEEECcc
Confidence            77888653

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.67  E-value=1.7e-16  Score=127.96  Aligned_cols=194  Identities=11%  Similarity=0.068  Sum_probs=129.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+.+++.|.++|++|++.+|+     .++.+......+.++.++++|++|++++.++++       ++
T Consensus         6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           6 KTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            579999999999999999999999999999998     555544433345678899999999999887775       58


Q ss_pred             CEEEEcCcCCC-------------------chhHHHHHHHHHHhCC-cceeec-cCCCCCCccCCccCCCCcchHH-HHH
Q 039623           75 DVVISTVSRGQ-------------------IPEQAKIIAAVKEAGN-VKRFLP-SEFGNDVDRSQNVVEPAKSAYA-DKI  132 (292)
Q Consensus        75 d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~-~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-~K~  132 (292)
                      |++||+|+...                   +.....+.+++.+.-. -+.++. |+.+....       |....|. +|+
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-------~~~~~Y~~sK~  153 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-------FGLAHYAAGKL  153 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-------HHHHHHHHCSS
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-------cCccccchhhH
Confidence            99999998765                   3344445555444321 122222 44332211       2344555 999


Q ss_pred             HHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc-
Q 039623          133 KIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR-  204 (292)
Q Consensus       133 ~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-  204 (292)
                      .++.+.+.       .|+++..|.||.+-.........        +....+........+..++|+|++++.++.+.. 
T Consensus       154 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~--------~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~  225 (241)
T d2a4ka1         154 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP--------WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESA  225 (241)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH--------HHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH--------hHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhC
Confidence            99998874       57999999999986553321110        000001011112235688999999999997542 


Q ss_pred             -CCCceEEEcCC
Q 039623          205 -TLNKTLYIRPP  215 (292)
Q Consensus       205 -~~~~~~~~~~~  215 (292)
                       ..|+++.+.|.
T Consensus       226 ~itG~~i~vDGG  237 (241)
T d2a4ka1         226 YITGQALYVDGG  237 (241)
T ss_dssp             TCCSCEEEESTT
T ss_pred             CCcCceEEeCCC
Confidence             34677777653

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.67  E-value=7.4e-16  Score=126.77  Aligned_cols=199  Identities=14%  Similarity=0.073  Sum_probs=129.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+     .++.+.+......++..+.+|++|.+++.++++       .+
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKS-----AERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            479999999999999999999999999999998     666655554456678999999999988877764       68


Q ss_pred             CEEEEcCcCCC----------------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCC
Q 039623           75 DVVISTVSRGQ----------------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        75 d~vi~~a~~~~----------------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~  124 (292)
                      |++||+||...                            +..++.++..+++.+  .++|.  |..+....       |.
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~-------~~  151 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPN-------GG  151 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTT-------SS
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCC-------CC
Confidence            99999998642                            334555566666554  34443  44443211       23


Q ss_pred             cchHH-HHHHHHHHHHH------cCccEEEEecceeccccccccccCC-CCCCCCCc-eeecCCCcceEEeeccchHHHH
Q 039623          125 KSAYA-DKIKIRRAIEA------EGIQYTYVSCNCFAGYFLPTLAQIG-APAPPREK-VTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       125 ~~~~~-~K~~~e~~~~~------~~~~~~~ir~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      ...|. +|..++.+.+.      .++++..|.||.+-........... ........ ...+........+..++|+|.+
T Consensus       152 ~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~  231 (276)
T d1bdba_         152 GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGA  231 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            44455 99998888764      3478888888888655332211110 00000000 0011111112235678999999


Q ss_pred             HHHhhcCC--c-CCCceEEEcC
Q 039623          196 TINSIDGP--R-TLNKTLYIRP  214 (292)
Q Consensus       196 ~~~~l~~~--~-~~~~~~~~~~  214 (292)
                      ++.++..+  . ..|+.+.+.|
T Consensus       232 v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         232 YVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             HHHHHCHHHHTTCSSCEEEESS
T ss_pred             HHHHcCCcccCCeeCcEEEECc
Confidence            99988632  2 3477777764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.67  E-value=2.3e-16  Score=129.15  Aligned_cols=200  Identities=14%  Similarity=0.128  Sum_probs=127.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhh-----cCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFK-----NLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-----~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      |.++||||++.||+.+++.|+++|++|.+.+|+     .++.+.+. ++.     ..++..+.+|++|++++.++++   
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            568999999999999999999999999999998     55554332 222     2358899999999988888775   


Q ss_pred             ----cCCEEEEcCcCCC---------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCcc
Q 039623           73 ----QVDVVISTVSRGQ---------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        73 ----~~d~vi~~a~~~~---------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                          ++|++|||||...                           +..++.++..+++.+ -..++. |+.+.....    
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~----  155 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT----  155 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC----
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccC----
Confidence                5899999998632                           344556666666654 244444 443322222    


Q ss_pred             CCCCcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee---ecCCCcceEEeecc
Q 039623          121 VEPAKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT---IFGDGNAGAVYNKE  189 (292)
Q Consensus       121 ~~~~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v  189 (292)
                        |....|. +|..++.+.+.       .|+++..|.||.+-............  .......   ..........+...
T Consensus       156 --~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~Pl~R~g~p  231 (264)
T d1spxa_         156 --PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEE--TSKKFYSTMATMKECVPAGVMGQP  231 (264)
T ss_dssp             --TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------------HHHHHHHHHHCTTSSCBCH
T ss_pred             --CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHH--HHHHHHHHHHHHHhcCCCCCCcCH
Confidence              3445565 99998888764       58999999999987654322211100  0000000   00000011235678


Q ss_pred             chHHHHHHHhhcCC--c-CCCceEEEcCC
Q 039623          190 DDIATYTINSIDGP--R-TLNKTLYIRPP  215 (292)
Q Consensus       190 ~D~a~~~~~~l~~~--~-~~~~~~~~~~~  215 (292)
                      +|+|++++.++.++  . ..|+.+.+.|.
T Consensus       232 edvA~~v~fL~S~~~s~~itG~~i~vDGG  260 (264)
T d1spxa_         232 QDIAEVIAFLADRKTSSYIIGHQLVVDGG  260 (264)
T ss_dssp             HHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence            99999999999743  2 35777877653

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.66  E-value=3.6e-16  Score=127.57  Aligned_cols=200  Identities=13%  Similarity=0.090  Sum_probs=130.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+     .++.+.+.. +.  ..++..+.+|++|++++.++++      
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999998     555543332 22  3467899999999988887775      


Q ss_pred             -cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cC-CCCCCccCCccCCCCc
Q 039623           73 -QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SE-FGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 -~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~-~g~~~~~~~~~~~~~~  125 (292)
                       .+|++||+||...                        +..++.++..+++.+ -.++|. |+ .+....       |..
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~-------~~~  152 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP-------PNM  152 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC-------TTB
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCC-------cch
Confidence             5899999999653                        344555666666665 567776 33 322111       233


Q ss_pred             -chHHHHHHHHHHHHH-------cCccEEEEecceecccccccccc-----CCCCCCCCCce---eecCCCcceEEeecc
Q 039623          126 -SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQ-----IGAPAPPREKV---TIFGDGNAGAVYNKE  189 (292)
Q Consensus       126 -~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~i~v  189 (292)
                       .|..+|..++.+.+.       .|+++..|.||.+..........     .........+-   ..+........+..+
T Consensus       153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p  232 (260)
T d1zema1         153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCH
Confidence             444499999888774       57999999999987653211100     00000000000   000000112235678


Q ss_pred             chHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          190 DDIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       190 ~D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +|+|.+++.++.+..  ..|+.+.+.|
T Consensus       233 edvA~~v~fL~S~~s~~itG~~i~VDG  259 (260)
T d1zema1         233 NEIPGVVAFLLGDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             GGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             HHHHHHHHHHhCchhcCccCCeEEeCC
Confidence            999999999997543  2466676654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8e-16  Score=124.01  Aligned_cols=172  Identities=13%  Similarity=0.094  Sum_probs=123.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h--hcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F--KNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      +.++||||++.||+++++.|.++|++|.+.+|+     .++.+.+.. +  .+.++..+.+|++|++++.++++      
T Consensus         8 kv~lITGas~GIG~~ia~~la~~G~~V~l~~r~-----~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            569999999999999999999999999999998     666544433 2  23468899999999998887774      


Q ss_pred             -cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcch
Q 039623           73 -QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 -~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~  127 (292)
                       .+|++|||||...                       +..++.++..+++.+ -.++|. |+.......      |....
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~------~~~~~  155 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV------PFLLA  155 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH------HHHHH
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCC------CCcHH
Confidence             5899999999876                       445666777777776 567775 443322222      23445


Q ss_pred             HH-HHHHHHHHHHH----------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          128 YA-DKIKIRRAIEA----------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       128 ~~-~K~~~e~~~~~----------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      |. +|.+++.+.+.          .|+.++.+.||++-..+...           ...       .....+..+|+|+.+
T Consensus       156 Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~-----------~~~-------~~~~~~~pe~va~~i  217 (244)
T d1yb1a_         156 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----------PST-------SLGPTLEPEEVVNRL  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----------THH-------HHCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC-----------cCc-------cccCCCCHHHHHHHH
Confidence            55 99998887763          26889999999886543211           000       011234678999999


Q ss_pred             HHhhcCC
Q 039623          197 INSIDGP  203 (292)
Q Consensus       197 ~~~l~~~  203 (292)
                      +..+..+
T Consensus       218 ~~~~~~~  224 (244)
T d1yb1a_         218 MHGILTE  224 (244)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcC
Confidence            9888765

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.66  E-value=2.5e-16  Score=127.24  Aligned_cols=194  Identities=13%  Similarity=0.062  Sum_probs=128.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-h--hcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-F--KNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      -||||||++.||+++++.|+++|++|.+.+++.    .++.+.+.. +  ...++..+.+|++|++++.++++       
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARS----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999998876542    344433322 2  23467889999999998887765       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchH
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~  128 (292)
                      ++|++||+||...                       +..++.++..+++.+ -.++|. |+.......     .....|.
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~-----~~~~~Y~  152 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGN-----IGQANYA  152 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----TTCHHHH
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCC-----CCCHHHH
Confidence            5899999999765                       455677777777766 567776 443211111     1123444


Q ss_pred             HHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhc
Q 039623          129 ADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSID  201 (292)
Q Consensus       129 ~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~  201 (292)
                      .+|..++.+.+.       .|+++..|.||++-..........        ....+........+...+|+|+++..++.
T Consensus       153 asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~--------~~~~~~~~~pl~R~~~p~dvA~~v~fLa~  224 (244)
T d1edoa_         153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED--------MEKKILGTIPLGRTGQPENVAGLVEFLAL  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH--------HHHHHHTSCTTCSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHHC
Confidence            599999888774       589999999998865432221100        00000011111235678999999999864


Q ss_pred             CCc---CCCceEEEcC
Q 039623          202 GPR---TLNKTLYIRP  214 (292)
Q Consensus       202 ~~~---~~~~~~~~~~  214 (292)
                      ++.   ..|+.+.+.|
T Consensus       225 S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         225 SPAASYITGQAFTIDG  240 (244)
T ss_dssp             CSGGGGCCSCEEEEST
T ss_pred             CchhcCCcCCeEEeCC
Confidence            433   2467777754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.65  E-value=2.8e-16  Score=129.18  Aligned_cols=199  Identities=14%  Similarity=0.129  Sum_probs=130.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-----cCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-----NLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-----~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+     .++.+.+.. +.     ..++..+.+|++|++++.++++   
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (274)
T d1xhla_           5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL   79 (274)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     555543322 22     2357899999999988877765   


Q ss_pred             ----cCCEEEEcCcCCC-------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCC
Q 039623           73 ----QVDVVISTVSRGQ-------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        73 ----~~d~vi~~a~~~~-------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                          .+|++||+||...                         +..++.++..+++.+ -..++. |+.......      
T Consensus        80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~------  152 (274)
T d1xhla_          80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH------  152 (274)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC------
T ss_pred             HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccC------
Confidence                5899999998643                         334555666666655 455555 433322221      


Q ss_pred             CCcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc----eeecCCCcceEEeeccc
Q 039623          123 PAKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK----VTIFGDGNAGAVYNKED  190 (292)
Q Consensus       123 ~~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~v~  190 (292)
                      +....|. +|..++.+.+.       .|+++..|.||++-...........   .....    .......-....+..++
T Consensus       153 ~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~~~iPlgR~g~pe  229 (274)
T d1xhla_         153 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPE---TASDKLYSFIGSRKECIPVGHCGKPE  229 (274)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCH---HHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccc---hhhHHHHHHHHHHHcCCCCCCCcCHH
Confidence            2345555 99999888764       5899999999999765332211000   00000    00000001112345789


Q ss_pred             hHHHHHHHhhcCC--c-CCCceEEEcCC
Q 039623          191 DIATYTINSIDGP--R-TLNKTLYIRPP  215 (292)
Q Consensus       191 D~a~~~~~~l~~~--~-~~~~~~~~~~~  215 (292)
                      |+|++++.++..+  . ..|+.+.+.|.
T Consensus       230 diA~~v~fL~S~d~s~~itG~~i~vDGG  257 (274)
T d1xhla_         230 EIANIIVFLADRNLSSYIIGQSIVADGG  257 (274)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCCccccCccCcEEEeCcC
Confidence            9999999999632  2 35778888754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.65  E-value=3.2e-16  Score=128.80  Aligned_cols=202  Identities=14%  Similarity=0.105  Sum_probs=129.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh-hh-----cCCcEEEECCCCCHHHHHHHHc---
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI-FK-----NLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-----~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      |+++||||++.||+++++.|.++|++|.+.+|+     .++.+.+.. +.     ..++..+.+|++|++++.++++   
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     666544333 22     2347899999999998887775   


Q ss_pred             ----cCCEEEEcCcCCC---------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCcc
Q 039623           73 ----QVDVVISTVSRGQ---------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNV  120 (292)
Q Consensus        73 ----~~d~vi~~a~~~~---------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~  120 (292)
                          ++|++||+||...                           +..++.++..+++.+ -..++. |+.+.....    
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~----  155 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ----  155 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC----
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCC----
Confidence                5899999998753                           233445555555544 233433 433322221    


Q ss_pred             CCCCcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCC-CCceeecCCCcceEEeeccch
Q 039623          121 VEPAKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPP-REKVTIFGDGNAGAVYNKEDD  191 (292)
Q Consensus       121 ~~~~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D  191 (292)
                        |....|. +|..++.+.+.       .|+++..|.||++-................ ...............+...+|
T Consensus       156 --~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~ped  233 (272)
T d1xkqa_         156 --PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH  233 (272)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             --CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHH
Confidence              3445555 99998888764       589999999999876533221100000000 000000000011123567899


Q ss_pred             HHHHHHHhhcCC--c-CCCceEEEcCC
Q 039623          192 IATYTINSIDGP--R-TLNKTLYIRPP  215 (292)
Q Consensus       192 ~a~~~~~~l~~~--~-~~~~~~~~~~~  215 (292)
                      +|++++.++..+  . ..|+++.+.|.
T Consensus       234 iA~~v~fL~S~~as~~iTG~~i~vDGG  260 (272)
T d1xkqa_         234 IANIILFLADRNLSFYILGQSIVADGG  260 (272)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCcchhCCccCeEEEeCcC
Confidence            999999999643  2 35777888754

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.65  E-value=2.3e-16  Score=128.76  Aligned_cols=203  Identities=13%  Similarity=0.041  Sum_probs=127.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |++|||||++.||.++++.|+++|++|++..|+.    .++.+.+ +.+.  ..++..+.+|++|.+++.++++      
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~----~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCC----hHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999877763    3333222 2222  3468899999999988888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHHh----CCcceeeccCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEA----GNVKRFLPSEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~----~~~~~~i~s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       ..|++||+||...                   +.+...+++++.++    + --.++.|+.+.....      |....|
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g-~~iii~s~~~~~~~~------~~~~~Y  155 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG-RIILTSSIAAVMTGI------PNHALY  155 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE-EEEEECCGGGTCCSC------CSCHHH
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC-cccccccccccccCC------CCchhH
Confidence             5899999999865                   33444444444432    2 112233444433221      344555


Q ss_pred             H-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCC-CCCCCC---c-eeecCCCcceEEeeccchHHHH
Q 039623          129 A-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGA-PAPPRE---K-VTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       129 ~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~-~~~~~~---~-~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                      . +|..++.+.+.       .|+++..|.||++-............ ......   . .....+......+...+|+|++
T Consensus       156 ~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~  235 (259)
T d1ja9a_         156 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence            5 99998888774       58999999999987653221111100 000000   0 0000111122346788999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.++.+..  ..|+++.+.|.
T Consensus       236 v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         236 VSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhcCCcCceEEeCCC
Confidence            999998653  24677777643

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=7.8e-16  Score=124.37  Aligned_cols=197  Identities=12%  Similarity=0.054  Sum_probs=131.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc---cCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK---QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~---~~d~vi   78 (292)
                      |+++||||++.||+++++.|+++|++|++.+|+     +++.+.+..  ..+++...+|+.+.+.+.....   ..|++|
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~-----~~~l~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           7 KVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQELEK--YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHGGGGG--STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHh--ccCCceeeeeccccccccccccccccceeEE
Confidence            469999999999999999999999999999998     666544433  4678999999998877766654   689999


Q ss_pred             EcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcchHHHHHH
Q 039623           79 STVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSAYADKIK  133 (292)
Q Consensus        79 ~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~~~~K~~  133 (292)
                      |++|...                       +..++.++..+.+.+ -.+++.  |..+.....     .....|..+|..
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~-----~~~~~Y~~sKaa  153 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV-----VNRCVYSTTKAA  153 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC-----TTBHHHHHHHHH
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCc-----cchhHHHHHHHH
Confidence            9999866                       334555555555555 456665  444432221     123345559999


Q ss_pred             HHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEeeccchHHHHHHHhhcCCc-
Q 039623          134 IRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYNKEDDIATYTINSIDGPR-  204 (292)
Q Consensus       134 ~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-  204 (292)
                      ++.+.+.       .|+++..|.||.+-...........   ..... ...+........+...+|+|+++..++.+.. 
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR---GNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS---SSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhh---hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence            9998874       5899999999998664432221110   00000 0000000112235688999999999997643 


Q ss_pred             -CCCceEEEcC
Q 039623          205 -TLNKTLYIRP  214 (292)
Q Consensus       205 -~~~~~~~~~~  214 (292)
                       ..|+++.+.|
T Consensus       231 ~iTG~~i~VDG  241 (245)
T d2ag5a1         231 YVTGNPVIIDG  241 (245)
T ss_dssp             TCCSCEEEECT
T ss_pred             CCcCceEEeCC
Confidence             3467777764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.64  E-value=6.6e-16  Score=128.48  Aligned_cols=198  Identities=11%  Similarity=0.037  Sum_probs=122.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhh-Hhhh---hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKL-IEIF---KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+|.||+++++.|+++|++|++.+|+     .++.+. .+++   ....+..+.+|++|.+++.+++.     
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~-----~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK-----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            569999999999999999999999999999998     544322 2222   34678899999999998877664     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|+++|+||...                       .......+........-..++. ++......      .+...
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~------~~~~~  174 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG------SGFVV  174 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC------CTTCH
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc------ccccc
Confidence              5899999999765                       1112222222222221233333 22211111      12334


Q ss_pred             hHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHH
Q 039623          127 AYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       127 ~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      .|. +|..++.+.+.       .|+++..|.||.+-..........     ................+...+|+|+++..
T Consensus       175 ~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~pl~R~~~pediA~~v~f  249 (294)
T d1w6ua_         175 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-----TGTFEKEMIGRIPCGRLGTVEELANLAAF  249 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-----TSHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC-----cHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence            455 99999888874       579999999999876543222111     00000000011112245678999999999


Q ss_pred             hhcCCc--CCCceEEEcCC
Q 039623          199 SIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.+..  ..|+++.+.|.
T Consensus       250 L~sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         250 LCSDYASWINGAVIKFDGG  268 (294)
T ss_dssp             HTSGGGTTCCSCEEEESTT
T ss_pred             HhCchhcCCCCcEEEECCC
Confidence            997543  35777777654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.64  E-value=5.2e-16  Score=126.46  Aligned_cols=199  Identities=16%  Similarity=0.129  Sum_probs=127.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc-------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      .+|||||++.||+++++.|.++|++|++.+|+     .++.+.+ +++.  ..++..+.+|++|++++.++++       
T Consensus         4 ValITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           4 VALVTGATSGIGLEIARRLGKEGLRVFVCARG-----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46999999999999999999999999999998     5554433 2232  3468889999999999888775       


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHH------HhCCcceeec--cCCCCCCccCCccCCCCc
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVK------EAGNVKRFLP--SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~------~~~~~~~~i~--s~~g~~~~~~~~~~~~~~  125 (292)
                      ++|++|||||...                   +.+...+.+++.      +.+ -.++|.  |..+.. ..      |..
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~-~~------~~~  150 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQ-GV------VHA  150 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTS-CC------TTC
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Cccccccccccccc-cc------ccc
Confidence            5899999999765                   445555555543      334 355655  333322 21      233


Q ss_pred             -chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCC--CCCCCCCc-eeecCCCcceEEeeccchHHH
Q 039623          126 -SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIG--APAPPREK-VTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       126 -~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~  194 (292)
                       .|..+|..+..+.+.       .|+++..|.||++-...........  ......+. ...+........+...+|+|.
T Consensus       151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~  230 (257)
T d2rhca1         151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE  230 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence             455599999888874       4688999999988654322111000  00000000 000001111223567899999


Q ss_pred             HHHHhhcCCc--CCCceEEEcC
Q 039623          195 YTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       195 ~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +++.++.+..  ..|+.+.+.|
T Consensus       231 ~v~fL~S~~s~~itG~~i~vDG  252 (257)
T d2rhca1         231 MVAYLIGPGAAAVTAQALNVCG  252 (257)
T ss_dssp             HHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCCcCceEEECc
Confidence            9999997542  3467777764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.64  E-value=7.5e-16  Score=126.63  Aligned_cols=203  Identities=13%  Similarity=0.074  Sum_probs=129.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||++.||+++++.|+++|++|++.+|+.    .++.+.+ +.+.  ...+..+.+|++|++++.++++      
T Consensus        19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~----~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANS----TESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCc----hHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999998873    2222222 2222  3468899999999988888775      


Q ss_pred             -cCCEEEEcCcCCC-------------------chhHHHHHHHHHH----hCCcceeeccCCCCCCccCCccCCCCcchH
Q 039623           73 -QVDVVISTVSRGQ-------------------IPEQAKIIAAVKE----AGNVKRFLPSEFGNDVDRSQNVVEPAKSAY  128 (292)
Q Consensus        73 -~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~----~~~~~~~i~s~~g~~~~~~~~~~~~~~~~~  128 (292)
                       ++|+++|+++...                   +.+...+.+++.+    .+ -..++.|+.+....      .+....|
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g-~~i~i~s~~~~~~~------~~~~~~Y  167 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG-RLILMGSITGQAKA------VPKHAVY  167 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC-EEEEECCGGGTCSS------CSSCHHH
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccc-cccccccccccccc------ccchhhH
Confidence             5899999999765                   3344444444443    33 22233355443322      1344555


Q ss_pred             H-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCcee-----ecCCCcceEEeeccchHHHH
Q 039623          129 A-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVT-----IFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       129 ~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~v~D~a~~  195 (292)
                      . +|..++.+.+.       .|+++..|.||.+-.....................     ..........+...+|+|.+
T Consensus       168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~  247 (272)
T d1g0oa_         168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence            5 99999888873       68999999999997654332221110000000000     00000111246788999999


Q ss_pred             HHHhhcCCc--CCCceEEEcCC
Q 039623          196 TINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       196 ~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +..++....  ..|+.+.+.|.
T Consensus       248 v~fL~s~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         248 VCFLASNDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhcCccCceEeECCC
Confidence            999997543  24677777653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.62  E-value=5e-15  Score=119.99  Aligned_cols=149  Identities=15%  Similarity=0.175  Sum_probs=101.8

Q ss_pred             CceEEEEccCCcchHHHHHHHHh---CCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc---
Q 039623            1 MAATLIIGGTGYIGKKILEASVK---AGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK---   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~---   72 (292)
                      ||+||||||++.||+.++++|++   +|++|++.+|+     .++.+.++++  ...++.++.+|++|++++.++++   
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~   76 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN-----REQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   76 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC-----TTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhH
Confidence            89999999999999999999974   68999999998     5555444443  24689999999999877766543   


Q ss_pred             ------cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhC----------Ccceeec--cCC
Q 039623           73 ------QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAG----------NVKRFLP--SEF  110 (292)
Q Consensus        73 ------~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~----------~~~~~i~--s~~  110 (292)
                            ++|++||+||...                        +..++.++..+++..          .-.++|.  |..
T Consensus        77 ~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~  156 (248)
T d1snya_          77 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  156 (248)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence                  4899999999743                        233444444444431          0233443  444


Q ss_pred             CCCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceecccc
Q 039623          111 GNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYF  157 (292)
Q Consensus       111 g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~  157 (292)
                      |.....   +......|..+|..+..+.+.       .|+++..+.||++-...
T Consensus       157 g~~~~~---~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         157 GSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             GCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             cccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            432221   111123455599998877653       57999999999887553

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=5.6e-15  Score=122.75  Aligned_cols=209  Identities=10%  Similarity=0.010  Sum_probs=135.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCC----CcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASD----PVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||++.||+.+++.|.++|++|.+.+|+.....    .++.+.+..........+.+|+.|.++..++++     
T Consensus         8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~   87 (302)
T d1gz6a_           8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDT   87 (302)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999988754221    222222222223344556778877665555443     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS  126 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~  126 (292)
                        ++|++|||||...                       +..++.++..+++.+ -.++|. |+.......     .....
T Consensus        88 ~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~-----~~~~~  161 (302)
T d1gz6a_          88 FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGN-----FGQAN  161 (302)
T ss_dssp             TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----TTCHH
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCC-----CCcHH
Confidence              6999999999765                       456677777777776 577776 432211111     11234


Q ss_pred             hHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHh
Q 039623          127 AYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINS  199 (292)
Q Consensus       127 ~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  199 (292)
                      |..+|..+..+.+.       .|+++..|.||.+........         .         +.....+..+|+|.+++++
T Consensus       162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---------~---------~~~~~~~~PedvA~~v~fL  223 (302)
T d1gz6a_         162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---------P---------EDLVEALKPEYVAPLVLWL  223 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---------C---------HHHHHHSCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---------c---------HhhHhcCCHHHHHHHHHHH
Confidence            54599999888774       578899999987643321111         0         1122345679999999999


Q ss_pred             hcCCc-CCCceEEEcCC------------------CccccHHHHHHHHHHHhCC
Q 039623          200 IDGPR-TLNKTLYIRPP------------------GNVYSFNELVTLWENKIGK  234 (292)
Q Consensus       200 l~~~~-~~~~~~~~~~~------------------~~~~t~~e~~~~~~~~~~~  234 (292)
                      +.... ..|+++.+.|.                  +...|..++++.+.+....
T Consensus       224 ~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~  277 (302)
T d1gz6a_         224 CHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF  277 (302)
T ss_dssp             TSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred             cCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCc
Confidence            86432 23444444321                  3356888999888887653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.5e-15  Score=122.27  Aligned_cols=185  Identities=18%  Similarity=0.163  Sum_probs=120.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh-hhhc----CCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE-IFKN----LGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~----~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |.+|||||++.||.++++.|.++|++|++.+|+     .++.+.+. ++..    ..+..+.+|++|++++.++++    
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            459999999999999999999999999999998     66654432 2332    247788999999998887764    


Q ss_pred             ---cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCC-cceeec-cC-CCCCCccCCccCCC
Q 039623           73 ---QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGN-VKRFLP-SE-FGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~-~~~~i~-s~-~g~~~~~~~~~~~~  123 (292)
                         ++|++|||||...                       +..++.++..+++.+. -.++|. |+ .+....    + .+
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----p-~~  160 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL----P-LS  160 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC----S-CG
T ss_pred             hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC----C-Cc
Confidence               5899999999764                       3344455555555441 245555 33 332111    0 12


Q ss_pred             CcchHH-HHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHH
Q 039623          124 AKSAYA-DKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIA  193 (292)
Q Consensus       124 ~~~~~~-~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  193 (292)
                      ....|. +|..++.+.+.         .++++..|.||.+-+.+.......        .............+...+|+|
T Consensus       161 ~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~--------~~~~~~~~~~~~r~~~pedvA  232 (257)
T d1xg5a_         161 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK--------DPEKAAATYEQMKCLKPEDVA  232 (257)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT--------CHHHHHHHHC---CBCHHHHH
T ss_pred             ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh--------hHHHHHhcCCCCCCcCHHHHH
Confidence            233354 99998877642         468888888988765543322111        000000011133567899999


Q ss_pred             HHHHHhhcCCc
Q 039623          194 TYTINSIDGPR  204 (292)
Q Consensus       194 ~~~~~~l~~~~  204 (292)
                      ++++.++.++.
T Consensus       233 ~~v~fL~s~~a  243 (257)
T d1xg5a_         233 EAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHSCT
T ss_pred             HHHHHHhCChh
Confidence            99999997753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.61  E-value=2.7e-15  Score=121.77  Aligned_cols=195  Identities=11%  Similarity=0.066  Sum_probs=124.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCC-CHHHHHHHHc----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQ-DHESLIKAIK----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~-d~~~~~~~~~----   72 (292)
                      |+|+||||++.||..++++|+++|++|+++.|+.     ++.+.+..+    ...++.++.+|++ +.+++.++++    
T Consensus         6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV-----ENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS-----CCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCc-----ccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999983     333333222    3446899999998 5555655553    


Q ss_pred             ---cCCEEEEcCcCCC---------------chhHHHHHHHHHHhC--Ccceeec--cCCCCCCccCCccCCCCcchHHH
Q 039623           73 ---QVDVVISTVSRGQ---------------IPEQAKIIAAVKEAG--NVKRFLP--SEFGNDVDRSQNVVEPAKSAYAD  130 (292)
Q Consensus        73 ---~~d~vi~~a~~~~---------------~~~~~~l~~a~~~~~--~~~~~i~--s~~g~~~~~~~~~~~~~~~~~~~  130 (292)
                         ++|++|||||...               +..++.+++.+.+..  .-.++|.  |..+....      .....|..+
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~------~~~~~Y~as  154 (254)
T d1sbya1          81 QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------HQVPVYSAS  154 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------TTSHHHHHH
T ss_pred             HcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC------CCCHHHHHH
Confidence               6899999999876               344555555554432  1245654  43432221      123345559


Q ss_pred             HHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCC
Q 039623          131 KIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGP  203 (292)
Q Consensus       131 K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~  203 (292)
                      |..+..+.+.       .|+++..|.||++..+.........  .... ......   ..+.....+++|++++.+++..
T Consensus       155 Kaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~--~~~~-~~~~~~---~~~~~~~~e~va~~~~~~~~~~  228 (254)
T d1sbya1         155 KAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVEP-RVAELL---LSHPTQTSEQCGQNFVKAIEAN  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSCT-THHHHH---TTSCCEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccch--hHHH-HHHhcc---ccCCCCCHHHHHHHHHHhhhCC
Confidence            9998877763       5899999999999765432221110  0001 110000   0113347899999999988765


Q ss_pred             cCCCceEEEcC
Q 039623          204 RTLNKTLYIRP  214 (292)
Q Consensus       204 ~~~~~~~~~~~  214 (292)
                      . .|.++.+.|
T Consensus       229 ~-tG~vi~vdg  238 (254)
T d1sbya1         229 K-NGAIWKLDL  238 (254)
T ss_dssp             C-TTCEEEEET
T ss_pred             C-CCCEEEECC
Confidence            4 466676654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.57  E-value=3.4e-15  Score=121.60  Aligned_cols=196  Identities=10%  Similarity=0.075  Sum_probs=118.3

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++||||+|  .||+++++.|.++|++|.+.+|+     .+..+..+..  ...+...+.+|++|++++.++++     
T Consensus         9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA-----ERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCc-----HHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            4699999997  69999999999999999888886     3332222222  23357889999999988887764     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhC-Ccceeec--cCCCCCCccCCccCCCC
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAG-NVKRFLP--SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~-~~~~~i~--s~~g~~~~~~~~~~~~~  124 (292)
                        ++|++||+|+...                       +.+...+.+++...- .-.++|.  |..+.. ..      |.
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~-~~------~~  156 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-VV------PK  156 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-BC------TT
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC-CC------CC
Confidence              5899999998743                       222333333332210 0123443  333322 11      23


Q ss_pred             cchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          125 KSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       125 ~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|. +|..++.+.+.       .|+++..|.||.+...........      .+.............+..++|+|+++
T Consensus       157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~------~~~~~~~~~~~pl~R~~~pedvA~~v  230 (256)
T d1ulua_         157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF------TKMYDRVAQTAPLRRNITQEEVGNLG  230 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh------HHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            44455 99999888774       589999999998865432211100      00000000000112356789999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      +.++.+..  ..|+.+.+.|.
T Consensus       231 ~fL~S~~s~~itG~~i~VDGG  251 (256)
T d1ulua_         231 LFLLSPLASGITGEVVYVDAG  251 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhCCccCCeEEECcC
Confidence            99997643  24677777653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.56  E-value=8.8e-15  Score=118.68  Aligned_cols=198  Identities=11%  Similarity=0.006  Sum_probs=124.2

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH-------ccCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI-------KQVD   75 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-------~~~d   75 (292)
                      +++||||++.||+.+++.|.++|++|.+.+|+     .++.+.++....   .+..+|++|.+++.+++       .++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~-----~~~~~~~~~~~~---~~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDES-----FKQKDELEAFAE---TYPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGG-----GGSHHHHHHHHH---HCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHhhhC---cEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999998     555544444322   23456776655544444       3699


Q ss_pred             EEEEcCcCCC------------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcc-hHH
Q 039623           76 VVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKS-AYA  129 (292)
Q Consensus        76 ~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~-~~~  129 (292)
                      ++|||||...                        +..++.++..+++.+ -.++|. |+.......      |... |..
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~------~~~~~Y~a  146 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW------KELSTYTS  146 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC------TTCHHHHH
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccc------cccccccc
Confidence            9999998643                        344566666666666 467776 443322221      2334 444


Q ss_pred             HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcC
Q 039623          130 DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDG  202 (292)
Q Consensus       130 ~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~  202 (292)
                      +|..++.+.+.       .|+++..|.||++-....+............+.............+...+|+|.+++.++.+
T Consensus       147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~  226 (252)
T d1zmta1         147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG  226 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred             ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999888774       58999999999987654332211000000000000000000112356889999999999976


Q ss_pred             Cc--CCCceEEEcCC
Q 039623          203 PR--TLNKTLYIRPP  215 (292)
Q Consensus       203 ~~--~~~~~~~~~~~  215 (292)
                      ..  ..|+.+.+.|.
T Consensus       227 ~s~~iTG~~i~vdGG  241 (252)
T d1zmta1         227 SCDYLTGQVFWLAGG  241 (252)
T ss_dssp             SCGGGTTCEEEESTT
T ss_pred             hhcCCcCCeEEECCC
Confidence            53  24777888653

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.56  E-value=5.8e-14  Score=113.71  Aligned_cols=174  Identities=15%  Similarity=0.126  Sum_probs=110.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |+||||||++.||.+++++|+++|+  .|++.+|+     .++.+.+....+.++.++.+|++|.+++.++++       
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~-----~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD-----VEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS-----GGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCC-----HHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999995  57888888     667766666667789999999999988776653       


Q ss_pred             --cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCC--c--------ceeec-c-CCCCCC
Q 039623           73 --QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGN--V--------KRFLP-S-EFGNDV  114 (292)
Q Consensus        73 --~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~--~--------~~~i~-s-~~g~~~  114 (292)
                        +.|++|||||...                        +..++.++..+++.+.  .        .+++. + ..+...
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence              3899999999643                        2334444444444320  0        11221 1 111111


Q ss_pred             ccC-CccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEe
Q 039623          115 DRS-QNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVY  186 (292)
Q Consensus       115 ~~~-~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (292)
                      ... .....+...|..||+.+..+.+.       .|+++..+.||++-......                       ...
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~-----------------------~~~  215 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------------NAA  215 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC-----------------------CCC
Confidence            110 11112233455599998877763       57899999999886542100                       012


Q ss_pred             eccchHHHHHHHhhcCC
Q 039623          187 NKEDDIATYTINSIDGP  203 (292)
Q Consensus       187 i~v~D~a~~~~~~l~~~  203 (292)
                      +++++.+..++..+...
T Consensus       216 ~~~e~~a~~~~~~~~~~  232 (250)
T d1yo6a1         216 LTVEQSTAELISSFNKL  232 (250)
T ss_dssp             ---HHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            46788888888888753

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.8e-14  Score=117.72  Aligned_cols=202  Identities=16%  Similarity=0.215  Sum_probs=124.3

Q ss_pred             ce-EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh----hh--hcCCcEEEECCCCCHHHHHHHHc--
Q 039623            2 AA-TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE----IF--KNLGVNVLYGDLQDHESLIKAIK--   72 (292)
Q Consensus         2 ~~-vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~--~~~~v~~v~~D~~d~~~~~~~~~--   72 (292)
                      +| ||||||++.||+++++.|.++|.+|+.+.+....  .+..+.+.    .+  ...++..+.+|++|.+++.++++  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRD--LKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESC--GGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCC--hhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc
Confidence            45 6899999999999999999999887666543221  22222222    22  23468999999999999988875  


Q ss_pred             ---cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCC
Q 039623           73 ---QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 ---~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~  124 (292)
                         ..|+++|++|...                       +..++.++..+++.+ -.++|.  |..|....       |.
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~-------~~  151 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL-------PF  151 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC-------TT
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCC-------CC
Confidence               4899999998765                       445666777777776 567775  44443222       23


Q ss_pred             cchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecC---------CCcceEEee
Q 039623          125 KSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFG---------DGNAGAVYN  187 (292)
Q Consensus       125 ~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i  187 (292)
                      ...|. +|+.++.+.+.       .|+++..|.||.+-..+.....................         .........
T Consensus       152 ~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
T d1jtva_         152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQ  231 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCC
Confidence            44455 99998888763       58999999999987654332211000000000000000         000001245


Q ss_pred             ccchHHHHHHHhhcCCcCCCceEEEcCC
Q 039623          188 KEDDIATYTINSIDGPRTLNKTLYIRPP  215 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~~~~~~~~~~~~~~  215 (292)
                      .++|+|++++.+++.+++.  ..|+.|.
T Consensus       232 ~PeeVA~~v~~~~~~~~p~--~ry~~g~  257 (285)
T d1jtva_         232 NPEEVAEVFLTALRAPKPT--LRYFTTE  257 (285)
T ss_dssp             CHHHHHHHHHHHHHCSSCC--SEEESCS
T ss_pred             CHHHHHHHHHHHHhCCCCC--eEEecHH
Confidence            6899999999999876532  3466643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.54  E-value=6e-14  Score=114.28  Aligned_cols=185  Identities=17%  Similarity=0.252  Sum_probs=120.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCC-EEEEecCCCCCCCcchhhHhhhh--cCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHP-TFALVRESTASDPVKGKLIEIFK--NLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~--~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      .+||||||+|.||..+++.|.++|++ |+.++|+.... ....+.++++.  ...+.++.+|++|.+++.++++      
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCH-HHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            36999999999999999999999985 77788863221 11122233333  3458899999999999988876      


Q ss_pred             cCCEEEEcCcCCC-------------------chhHHHHHHHHHHhCCcceeec-cCCCCCCccCCccCCCCcchHHHHH
Q 039623           73 QVDVVISTVSRGQ-------------------IPEQAKIIAAVKEAGNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKI  132 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------------~~~~~~l~~a~~~~~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~  132 (292)
                      ..|.|+|++|...                   +.+..++.+++...+ ..+++. |+.......     .....|..+|.
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~-----~~~~~YaAaka  162 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA-----PGLGGYAPGNA  162 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC-----TTCTTTHHHHH
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCC-----cccHHHHHHHH
Confidence            3789999999766                   456677777776665 566665 432211111     11334555999


Q ss_pred             HHHHHHHH---cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCcC
Q 039623          133 KIRRAIEA---EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPRT  205 (292)
Q Consensus       133 ~~e~~~~~---~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  205 (292)
                      .++.+.++   .|++++.|.||.+.+..+..-...       ..   +.  ..-...+..+++++++..++..+..
T Consensus       163 ~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~-------~~---~~--~~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         163 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVA-------DR---FR--RHGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECCBC----------------------CT--TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             hHHHHHHHHHhCCCCEEECCCCcccCCccccchHH-------HH---HH--hcCCCCCCHHHHHHHHHHHHhCCCc
Confidence            88877653   689999999998765432111000       00   00  0112456789999999999987643

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.6e-13  Score=111.02  Aligned_cols=192  Identities=15%  Similarity=0.117  Sum_probs=119.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------~~   74 (292)
                      |.++||||++.||.+++++|.++|++|++.+|+     .++.+........+......|+.+.+.......       ..
T Consensus         6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           6 LVAVITGGASGLGLATAERLVGQGASAVLLDLP-----NSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECT-----TSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence            568999999999999999999999999999998     555544444446778899999998766655443       57


Q ss_pred             CEEEEcCcCCC-------------------------chhHHHHHHHHHHh----C-----Ccceeec-cCCCCCCccCCc
Q 039623           75 DVVISTVSRGQ-------------------------IPEQAKIIAAVKEA----G-----NVKRFLP-SEFGNDVDRSQN  119 (292)
Q Consensus        75 d~vi~~a~~~~-------------------------~~~~~~l~~a~~~~----~-----~~~~~i~-s~~g~~~~~~~~  119 (292)
                      |.++++++...                         +.++..+.+++.+.    .     .-.++|. |+......    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~----  156 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG----  156 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC----
Confidence            88888765433                         33445555555432    1     0134655 33322111    


Q ss_pred             cCCCCcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccch
Q 039623          120 VVEPAKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDD  191 (292)
Q Consensus       120 ~~~~~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (292)
                        .|....|. +|..++.+.+.       .|+++..|.||.+............     .....  ..-.....+..++|
T Consensus       157 --~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~-----~~~~~--~~~pl~~R~g~pee  227 (248)
T d2o23a1         157 --QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKV-----CNFLA--SQVPFPSRLGDPAE  227 (248)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHH--HTCSSSCSCBCHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHH-----HHHHH--hcCCCCCCCcCHHH
Confidence              12344455 99999988874       5799999999998765433221110     00000  00000013567899


Q ss_pred             HHHHHHHhhcCCcCCCceEE
Q 039623          192 IATYTINSIDGPRTLNKTLY  211 (292)
Q Consensus       192 ~a~~~~~~l~~~~~~~~~~~  211 (292)
                      +|++++.+++++-..|++++
T Consensus       228 vA~~v~fL~s~~~itGq~I~  247 (248)
T d2o23a1         228 YAHLVQAIIENPFLNGEVIR  247 (248)
T ss_dssp             HHHHHHHHHHCTTCCSCEEE
T ss_pred             HHHHHHHHHhCCCCCceEeE
Confidence            99999999975433355544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.49  E-value=1e-13  Score=113.85  Aligned_cols=198  Identities=11%  Similarity=0.057  Sum_probs=122.3

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-------
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-------   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-------   72 (292)
                      |++|||||+|  .||.+++++|.++|++|++.+|+...  .++.+.+.. ......++..|+++.++..+++.       
T Consensus         6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~--~~~~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL--EKRVRPIAQ-ELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT--HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHh-hCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            6799999887  69999999999999999999998321  122222222 23467788999999888777763       


Q ss_pred             cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCcch
Q 039623           73 QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAKSA  127 (292)
Q Consensus        73 ~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~~~  127 (292)
                      ++|++||+++...                       ............+..+-...|.  |+.+.....      +...+
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~------~~~~~  156 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM------AHYNV  156 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------TTCHH
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc------ccchh
Confidence            6899999999765                       1112222222222211122222  444433222      23445


Q ss_pred             HH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCce-eecCCCcceEEeeccchHHHHHHH
Q 039623          128 YA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKV-TIFGDGNAGAVYNKEDDIATYTIN  198 (292)
Q Consensus       128 ~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~  198 (292)
                      |. +|..++.+.+.       .|+++..|.||.+...........       ... ...........+...+|+|.+++.
T Consensus       157 y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~-------~~~~~~~~~~~p~~r~~~pedIA~~v~f  229 (274)
T d2pd4a1         157 MGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-------RMILKWNEINAPLRKNVSLEEVGNAGMY  229 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-------HHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch-------HHHHHHHhhhhhccCCcCHHHHHHHHHH
Confidence            55 99999888764       579999999998876533222110       000 000000112245688999999999


Q ss_pred             hhcCCc--CCCceEEEcCC
Q 039623          199 SIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       199 ~l~~~~--~~~~~~~~~~~  215 (292)
                      ++.+..  ..|+++.+.|.
T Consensus       230 L~S~~s~~itG~~i~vDGG  248 (274)
T d2pd4a1         230 LLSSLSSGVSGEVHFVDAG  248 (274)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhChhhCCCcCceEEECCC
Confidence            997643  34677777653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=1.5e-13  Score=111.81  Aligned_cols=197  Identities=12%  Similarity=0.070  Sum_probs=122.8

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |++|||||+|  .||+++++.|+++|++|++.+|+     .+..+.+++.  .......+..|..+..+....+.     
T Consensus         6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-----DKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS-----TTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            6799999998  68899999999999999999998     3333333332  23357788899999877766664     


Q ss_pred             --cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCC-cceeec-cCCCCCCccCCccCCCC
Q 039623           73 --QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGN-VKRFLP-SEFGNDVDRSQNVVEPA  124 (292)
Q Consensus        73 --~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~-~~~~i~-s~~g~~~~~~~~~~~~~  124 (292)
                        ..|.++|+++...                        +.....+.+++...-+ -+.++. |+.+.....      |.
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~------~~  154 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI------PN  154 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------TT
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC------CC
Confidence              4799999998754                        2223333333322210 122333 555433322      23


Q ss_pred             cchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHH
Q 039623          125 KSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYT  196 (292)
Q Consensus       125 ~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  196 (292)
                      ...|. +|..++.+.+.       .|+++..|+||.+............      ..............+..++|+|.++
T Consensus       155 ~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~~~~~~~~pl~R~~~peeia~~v  228 (258)
T d1qsga_         155 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFR------KMLAHCEAVTPIRRTVTIEDVGNSA  228 (258)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHH------HHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhh------hHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            34455 99999988874       5799999999999765433221100      0000000000012356789999999


Q ss_pred             HHhhcCCc--CCCceEEEcCC
Q 039623          197 INSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       197 ~~~l~~~~--~~~~~~~~~~~  215 (292)
                      ..++.+..  ..|+++.+.|.
T Consensus       229 ~fL~s~~s~~itG~~i~vDGG  249 (258)
T d1qsga_         229 AFLCSDLSAGISGEVVHVDGG  249 (258)
T ss_dssp             HHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhcCccCceEEECcC
Confidence            99997542  34677777654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=1.4e-13  Score=112.01  Aligned_cols=188  Identities=9%  Similarity=0.051  Sum_probs=118.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHh---CCCCEEEEecCCCCCCCcchhhHhh-h----hcCCcEEEECCCCCHHHHHHHHc-
Q 039623            2 AATLIIGGTGYIGKKILEASVK---AGHPTFALVRESTASDPVKGKLIEI-F----KNLGVNVLYGDLQDHESLIKAIK-   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~-~----~~~~v~~v~~D~~d~~~~~~~~~-   72 (292)
                      |.++||||++.||+++++.|.+   +|++|++.+|+     .++.+.+.. +    .+..+..+.+|++|++++.++++ 
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            4589999999999999999975   79999999998     666544432 2    12357889999999998887763 


Q ss_pred             ----------cCCEEEEcCcCCC----------------------chhHHHHHHHHHHh----C-Ccceeec-cCCCCCC
Q 039623           73 ----------QVDVVISTVSRGQ----------------------IPEQAKIIAAVKEA----G-NVKRFLP-SEFGNDV  114 (292)
Q Consensus        73 ----------~~d~vi~~a~~~~----------------------~~~~~~l~~a~~~~----~-~~~~~i~-s~~g~~~  114 (292)
                                ..|+++|+||...                      +.+...+.+++.+.    + .-.++|. |+.....
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence                      3578999998532                      34555555555443    1 0134554 4332221


Q ss_pred             ccCCccCCCCcchHH-HHHHHHHHHHH-----cCccEEEEecceeccccccccccCCCCCCCCCc-eeecCCCcceEEee
Q 039623          115 DRSQNVVEPAKSAYA-DKIKIRRAIEA-----EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREK-VTIFGDGNAGAVYN  187 (292)
Q Consensus       115 ~~~~~~~~~~~~~~~-~K~~~e~~~~~-----~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i  187 (292)
                      ..      |....|. +|..++.+.+.     .|+++..|.||.+...+........    .... ...+........+.
T Consensus       162 ~~------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~~~~~r~~  231 (259)
T d1oaaa_         162 PY------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS----KDPELRSKLQKLKSDGALV  231 (259)
T ss_dssp             CC------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC----SCHHHHHHHHHHHHTTCSB
T ss_pred             CC------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcC----CCHHHHHHHHhcCCCCCCC
Confidence            11      2344455 99998887764     5789999999988765432221110    0000 00000000011346


Q ss_pred             ccchHHHHHHHhhcCCc
Q 039623          188 KEDDIATYTINSIDGPR  204 (292)
Q Consensus       188 ~v~D~a~~~~~~l~~~~  204 (292)
                      .++|+|++++.++.+..
T Consensus       232 ~p~evA~~i~~ll~~~s  248 (259)
T d1oaaa_         232 DCGTSAQKLLGLLQKDT  248 (259)
T ss_dssp             CHHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHhhhcc
Confidence            78999999999987543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.1e-12  Score=107.27  Aligned_cols=172  Identities=11%  Similarity=0.069  Sum_probs=114.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh----hhcCCcEEEECCCCCHHHHHHHHc-----
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI----FKNLGVNVLYGDLQDHESLIKAIK-----   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~v~~v~~D~~d~~~~~~~~~-----   72 (292)
                      |+++|||||+.||+++++.|+++|++|++++|+     .++.+.+..    .....+..+.+|..+.+.....+.     
T Consensus        15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999998     666544322    223457888999998776655543     


Q ss_pred             --cCCEEEEcCcCCC-----------------------chhHHHHHHHHHHhCCcceeec--cCCCCCCccCCccCCCCc
Q 039623           73 --QVDVVISTVSRGQ-----------------------IPEQAKIIAAVKEAGNVKRFLP--SEFGNDVDRSQNVVEPAK  125 (292)
Q Consensus        73 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a~~~~~~~~~~i~--s~~g~~~~~~~~~~~~~~  125 (292)
                        ..|++++++|...                       +..++.++..+++.+  .++|.  |..|....       |..
T Consensus        90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~~-------p~~  160 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVAY-------PMV  160 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSCC-------TTC
T ss_pred             hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCCC-------CCc
Confidence              5899999998754                       345666666666544  44443  44332211       234


Q ss_pred             -chHHHHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHH
Q 039623          126 -SAYADKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATY  195 (292)
Q Consensus       126 -~~~~~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  195 (292)
                       .|..+|+.++.+.+.         .++++..+.||.+-.........       +         .........+++|+.
T Consensus       161 ~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~-------~---------~~~~~~~~~e~~a~~  224 (269)
T d1xu9a_         161 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS-------G---------IVHMQAAPKEECALE  224 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC-------G---------GGGGGCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc-------C---------CccccCCCHHHHHHH
Confidence             444599998887763         25778888999887543211100       0         001123456788888


Q ss_pred             HHHhhcCC
Q 039623          196 TINSIDGP  203 (292)
Q Consensus       196 ~~~~l~~~  203 (292)
                      ++..+...
T Consensus       225 i~~~~~~~  232 (269)
T d1xu9a_         225 IIKGGALR  232 (269)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHhhcC
Confidence            88766543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.39  E-value=1.1e-12  Score=107.09  Aligned_cols=202  Identities=13%  Similarity=0.075  Sum_probs=118.5

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhhhcCCcEEEECCCCCHHHHHHHHc------
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFKNLGVNVLYGDLQDHESLIKAIK------   72 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------   72 (292)
                      |+++||||+|  .||+++++.|.++|++|++.+|+     .++. +.+.+....+...+++|+++.++..++++      
T Consensus         7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~-----~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD-----RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECS-----CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCC-----hHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            6799999765  59999999999999999999988     4443 33444446678899999999876655543      


Q ss_pred             ----cCCEEEEcCcCCC------------------------chhHHHHHHHHHHhCCcc-eeeccCCCCCCccCCccCCC
Q 039623           73 ----QVDVVISTVSRGQ------------------------IPEQAKIIAAVKEAGNVK-RFLPSEFGNDVDRSQNVVEP  123 (292)
Q Consensus        73 ----~~d~vi~~a~~~~------------------------~~~~~~l~~a~~~~~~~~-~~i~s~~g~~~~~~~~~~~~  123 (292)
                          ..|+++|+++...                        .........++....+-. .++.++.+....      .|
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~------~p  155 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA------MP  155 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC------CT
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc------Cc
Confidence                3699999999653                        111111222222111011 122222221111      13


Q ss_pred             CcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecC----C-CcceEEeeccc
Q 039623          124 AKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFG----D-GNAGAVYNKED  190 (292)
Q Consensus       124 ~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~i~v~  190 (292)
                      ....|. +|..++.+.+.       .|+++..|.||.+-......+.................    . .-..+.+..++
T Consensus       156 ~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~  235 (268)
T d2h7ma1         156 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT  235 (268)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCH
T ss_pred             ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHH
Confidence            344555 99999888774       57999999999987653322211100000000000000    0 00012356789


Q ss_pred             hHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          191 DIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       191 D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      |+|+++..++.+..  ..|+++.+.|
T Consensus       236 dva~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         236 PVAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             HHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             HHHHHHHHHhCchhcCccCCEEEECc
Confidence            99999999996532  2466777764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.38  E-value=1.1e-12  Score=105.36  Aligned_cols=187  Identities=14%  Similarity=0.143  Sum_probs=112.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc------cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK------QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~------~~d   75 (292)
                      |++|||||++.||+++++.|.++|++|++.+|+..     +         .....+.+|+.+......+..      ..+
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-----~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   67 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-----G---------EDLIYVEGDVTREEDVRRAVARAQEEAPLF   67 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-----S---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-----c---------ccceEeeccccchhhhHHHHHhhhcccccc
Confidence            67999999999999999999999999999999832     2         245678899998776666553      344


Q ss_pred             EEEEcCcCCC-----------------------chhHHHHHHHHHHh----C-----Ccceeec-cCCCCCCccCCccCC
Q 039623           76 VVISTVSRGQ-----------------------IPEQAKIIAAVKEA----G-----NVKRFLP-SEFGNDVDRSQNVVE  122 (292)
Q Consensus        76 ~vi~~a~~~~-----------------------~~~~~~l~~a~~~~----~-----~~~~~i~-s~~g~~~~~~~~~~~  122 (292)
                      .++++++...                       +.....+...+...    .     .-.++|. |+......      .
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------~  141 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------Q  141 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------C
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC------C
Confidence            5555544322                       12222233322221    0     0234554 33221111      1


Q ss_pred             CCc-chHHHHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHH
Q 039623          123 PAK-SAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIAT  194 (292)
Q Consensus       123 ~~~-~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  194 (292)
                      |.. .|..+|..++.+.+.       .|+++..|.||.+-............... ....+.      ...+..++|+|+
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~-~~~~~~------~~R~g~pedvA~  214 (241)
T d1uaya_         142 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASL-AAQVPF------PPRLGRPEEYAA  214 (241)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHH-HTTCCS------SCSCCCHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHH-HhcCCC------CCCCcCHHHHHH
Confidence            233 444499999888874       57999999999987553322111000000 000011      012457899999


Q ss_pred             HHHHhhcCCcCCCceEEEcCC
Q 039623          195 YTINSIDGPRTLNKTLYIRPP  215 (292)
Q Consensus       195 ~~~~~l~~~~~~~~~~~~~~~  215 (292)
                      +++.++.+.-..|+++.+.|.
T Consensus       215 ~v~fL~s~~~iTG~~i~VDGG  235 (241)
T d1uaya_         215 LVLHILENPMLNGEVVRLDGA  235 (241)
T ss_dssp             HHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHhCCCCCCCEEEECCc
Confidence            999999864445777787653

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.37  E-value=1.2e-12  Score=104.81  Aligned_cols=178  Identities=10%  Similarity=0.005  Sum_probs=109.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH-------c--
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI-------K--   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-------~--   72 (292)
                      |+|+||||+|.||+++++.|.++|++|.+++|+....            ......+..|..+.++...+.       .  
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999874321            112234455555444333222       2  


Q ss_pred             cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHH-
Q 039623           73 QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYA-  129 (292)
Q Consensus        73 ~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-  129 (292)
                      ++|++||+||...                    +.+...+.+++.++= .-.++|. |+.......      |....|. 
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------~~~~~Y~a  144 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------PGMIGYGM  144 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------TTBHHHHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc------cCCcccHH
Confidence            4799999998532                    233444444443321 0134554 433222111      2334444 


Q ss_pred             HHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          130 DKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       130 ~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      +|..++.+.+.         .|+++..|.||.+-.........       ..        + ...++..+++|+.+..++
T Consensus       145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~--------~-~~~~~~pe~va~~~~~l~  208 (236)
T d1dhra_         145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP-------EA--------D-FSSWTPLEFLVETFHDWI  208 (236)
T ss_dssp             HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST-------TS--------C-GGGSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc-------cc--------h-hhcCCCHHHHHHHHHHHh
Confidence            99999999875         26788888999887654221110       00        0 113467899999999999


Q ss_pred             cCCc--CCCceEEEc
Q 039623          201 DGPR--TLNKTLYIR  213 (292)
Q Consensus       201 ~~~~--~~~~~~~~~  213 (292)
                      ....  ..|+.+.+.
T Consensus       209 s~~~~~i~G~~i~v~  223 (236)
T d1dhra_         209 TGNKRPNSGSLIQVV  223 (236)
T ss_dssp             TTTTCCCTTCEEEEE
T ss_pred             CCCccCCCCCeEEEE
Confidence            7643  245555553

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.34  E-value=2e-11  Score=98.88  Aligned_cols=189  Identities=16%  Similarity=0.127  Sum_probs=103.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH--------c
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI--------K   72 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~--------~   72 (292)
                      ||-|+||||++.||+++++.|.++|++|.+++|+...                   ...|+.+.+......        .
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            7889999999999999999999999999999997321                   245777665544332        1


Q ss_pred             cCCEEEEcCcCCC------------chhHHHH----HHHHHHhCCccee--eccCCCCCCc---c----------C----
Q 039623           73 QVDVVISTVSRGQ------------IPEQAKI----IAAVKEAGNVKRF--LPSEFGNDVD---R----------S----  117 (292)
Q Consensus        73 ~~d~vi~~a~~~~------------~~~~~~l----~~a~~~~~~~~~~--i~s~~g~~~~---~----------~----  117 (292)
                      ..|+++++|+...            ......+    .+...+.. ....  +.+.......   .          .    
T Consensus        62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~  140 (257)
T d1fjha_          62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR  140 (257)
T ss_dssp             CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred             CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEEEEe
Confidence            4899999998654            1112222    22222222 1111  1111000000   0          0    


Q ss_pred             ----CccCCCCcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEE
Q 039623          118 ----QNVVEPAKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAV  185 (292)
Q Consensus       118 ----~~~~~~~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (292)
                          .....+....|. +|..++.+.+.       .|+++..|.||++............   .....  ..........
T Consensus       141 s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~--~~~~~~PlgR  215 (257)
T d1fjha_         141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP---RYGES--IAKFVPPMGR  215 (257)
T ss_dssp             HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------CCCSTTS
T ss_pred             eehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCH---HHHHH--HHhcCCCCCC
Confidence                000111223355 99999988874       5899999999999765433221110   00000  0000011123


Q ss_pred             eeccchHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          186 YNKEDDIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       186 ~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      +...+|+|.+++.++....  ..|+.+.+.|
T Consensus       216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vDG  246 (257)
T d1fjha_         216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCceEEeCC
Confidence            5678999999999997543  3467777764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.33  E-value=1.6e-12  Score=104.10  Aligned_cols=177  Identities=12%  Similarity=0.058  Sum_probs=106.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHH-------HHc--
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIK-------AIK--   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~-------~~~--   72 (292)
                      .|||||||+|.||++++++|.++|++|++++|+....            ......+.+|..+.+....       .+.  
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            3799999999999999999999999999999984322            1122344566654433222       222  


Q ss_pred             cCCEEEEcCcCCC--------------------chhHHHHHHHHHHhC-Ccceeec-cCCCCCCccCCccCCCCcchHH-
Q 039623           73 QVDVVISTVSRGQ--------------------IPEQAKIIAAVKEAG-NVKRFLP-SEFGNDVDRSQNVVEPAKSAYA-  129 (292)
Q Consensus        73 ~~d~vi~~a~~~~--------------------~~~~~~l~~a~~~~~-~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~-  129 (292)
                      .+|++|||||...                    +.++..+.+++.++- .-.+++. |+.+....      .|....|. 
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~------~~~~~~Y~a  144 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP------TPSMIGYGM  144 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------CTTBHHHHH
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC------cccccchHH
Confidence            4899999999633                    233444444444331 0134554 43322111      12334455 


Q ss_pred             HHHHHHHHHHH---------cCccEEEEecceeccccccccccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhh
Q 039623          130 DKIKIRRAIEA---------EGIQYTYVSCNCFAGYFLPTLAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSI  200 (292)
Q Consensus       130 ~K~~~e~~~~~---------~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l  200 (292)
                      +|..++.+.+.         .++++..+.|+.+-.........       ..         ....++..+|+++.++.++
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~-------~~---------~~~~~~~~~~va~~~~~~l  208 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP-------NA---------DHSSWTPLSFISEHLLKWT  208 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST-------TC---------CGGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc-------CC---------ccccCCCHHHHHHHHHHHh
Confidence            99999999875         24567777888876543221110       00         0123567899999988766


Q ss_pred             cCCc---CCCceEEE
Q 039623          201 DGPR---TLNKTLYI  212 (292)
Q Consensus       201 ~~~~---~~~~~~~~  212 (292)
                      .++.   ..|..+.+
T Consensus       209 ~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         209 TETSSRPSSGALLKI  223 (235)
T ss_dssp             HCGGGCCCTTCEEEE
T ss_pred             cCccccCCCceEEEE
Confidence            5532   23555555

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.9e-12  Score=105.03  Aligned_cols=79  Identities=18%  Similarity=0.252  Sum_probs=64.1

Q ss_pred             ceE-EEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhH-hhhh--cCCcEEEECCCCCHHHHHHHHc----
Q 039623            2 AAT-LIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLI-EIFK--NLGVNVLYGDLQDHESLIKAIK----   72 (292)
Q Consensus         2 ~~v-lItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~--~~~v~~v~~D~~d~~~~~~~~~----   72 (292)
                      |+| +||||++.||..+++.|.++ |++|++.+|+     .++.+.. +.+.  ..++.++.+|++|.+++.++++    
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~   77 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD-----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   77 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS-----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHH
Confidence            455 89999999999999999986 8999999999     6665433 3332  4568999999999988877664    


Q ss_pred             ---cCCEEEEcCcCCC
Q 039623           73 ---QVDVVISTVSRGQ   85 (292)
Q Consensus        73 ---~~d~vi~~a~~~~   85 (292)
                         .+|++|||||...
T Consensus        78 ~~g~iDiLVnNAGi~~   93 (275)
T d1wmaa1          78 EYGGLDVLVNNAGIAF   93 (275)
T ss_dssp             HHSSEEEEEECCCCCC
T ss_pred             hcCCcEEEEEcCCcCC
Confidence               5899999999754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.31  E-value=1e-11  Score=102.07  Aligned_cols=195  Identities=11%  Similarity=0.024  Sum_probs=111.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh----hhhcCCcEE-----------------EEC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE----IFKNLGVNV-----------------LYG   59 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~v~~-----------------v~~   59 (292)
                      |.-++||||++.||+++++.|.++|++|.+.+|++    .++.+.+.    .........                 ..+
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   77 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   77 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC----HHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccc
Confidence            34579999999999999999999999999988763    22222222    112233333                 345


Q ss_pred             CCCCHHHHHHHHc-------cCCEEEEcCcCCC---------------------------------chhHHHHHHHHHHh
Q 039623           60 DLQDHESLIKAIK-------QVDVVISTVSRGQ---------------------------------IPEQAKIIAAVKEA   99 (292)
Q Consensus        60 D~~d~~~~~~~~~-------~~d~vi~~a~~~~---------------------------------~~~~~~l~~a~~~~   99 (292)
                      |+++.+++.++++       ++|++||+||...                                 +.+...+.+++.+.
T Consensus        78 dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  157 (284)
T d1e7wa_          78 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  157 (284)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence            6888877777664       6899999999754                                 01111122222111


Q ss_pred             ---------CCcceeec-cCCCCCCccCCccCCCCcchHHHHHHHHHHHHH-------cCccEEEEecceeccc-ccc-c
Q 039623          100 ---------GNVKRFLP-SEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEA-------EGIQYTYVSCNCFAGY-FLP-T  160 (292)
Q Consensus       100 ---------~~~~~~i~-s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~-------~~~~~~~ir~~~~~~~-~~~-~  160 (292)
                               +....++. ++.......     .....|..+|..++.+.+.       .|+++..|.||+.... ..+ .
T Consensus       158 ~~~~~~~~~~~~~~ii~~~s~~~~~~~-----~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~  232 (284)
T d1e7wa_         158 VAGTPAKHRGTNYSIINMVDAMTNQPL-----LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPA  232 (284)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCC-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHH
T ss_pred             hhhhHHHhcCCCCcccccccccccCCc-----cceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHH
Confidence                     10123443 222211111     1123444599999888774       5889999999863211 110 0


Q ss_pred             cccCCCCCCCCCceeecCCCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEcCC
Q 039623          161 LAQIGAPAPPREKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRPP  215 (292)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~  215 (292)
                      .....     ....+.      ...+...+|+|.+++.++.+..  ..|+.+.+.|.
T Consensus       233 ~~~~~-----~~~~pl------~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG  278 (284)
T d1e7wa_         233 VWEGH-----RSKVPL------YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  278 (284)
T ss_dssp             HHHHH-----HTTCTT------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHH-----HhcCCC------CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcC
Confidence            00000     000000      0134578999999999997543  24677777653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.22  E-value=2.1e-11  Score=99.19  Aligned_cols=191  Identities=18%  Similarity=0.120  Sum_probs=108.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-----hhHhhhhcCCcEEEECCCCC----HHHHHHHH--
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-----KLIEIFKNLGVNVLYGDLQD----HESLIKAI--   71 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~v~~v~~D~~d----~~~~~~~~--   71 (292)
                      ..|||||++.||+++++.|+++|++|++.+|+     .++.     +.+..........+..|..+    .+.+.+++  
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH-----SEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   77 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----CHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----chHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHH
Confidence            57999999999999999999999999999998     3332     12222234456666666654    33333333  


Q ss_pred             -----ccCCEEEEcCcCCC------------------------------chhHHHHHHHHHHhC-------Cc-ceeec-
Q 039623           72 -----KQVDVVISTVSRGQ------------------------------IPEQAKIIAAVKEAG-------NV-KRFLP-  107 (292)
Q Consensus        72 -----~~~d~vi~~a~~~~------------------------------~~~~~~l~~a~~~~~-------~~-~~~i~-  107 (292)
                           ..+|++||+||...                              ..............-       .. ..++. 
T Consensus        78 ~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (266)
T d1mxha_          78 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  157 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhh
Confidence                 36999999999653                              000011111111110       00 01111 


Q ss_pred             cCCCCCCccCCccCCCCcchHH-HHHHHHHHHHH-------cCccEEEEecceeccccc-cccccCCCCCCCCCceeecC
Q 039623          108 SEFGNDVDRSQNVVEPAKSAYA-DKIKIRRAIEA-------EGIQYTYVSCNCFAGYFL-PTLAQIGAPAPPREKVTIFG  178 (292)
Q Consensus       108 s~~g~~~~~~~~~~~~~~~~~~-~K~~~e~~~~~-------~~~~~~~ir~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  178 (292)
                      ++.+..      ...|....|. +|..++.+.+.       .|+++..|.||++..... +......   . ....+ ++
T Consensus       158 ~~~~~~------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~---~-~~~~p-l~  226 (266)
T d1mxha_         158 CDAMTD------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEE---Y-RRKVP-LG  226 (266)
T ss_dssp             CCGGGG------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHH---H-HTTCT-TT
T ss_pred             hhcccc------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHH---H-HhcCC-CC
Confidence            221111      1123344454 99999888764       589999999998753311 1000000   0 00000 00


Q ss_pred             CCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          179 DGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       179 ~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                           +-+...+|+|.+++.++.+..  ..|+.+.+.|
T Consensus       227 -----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         227 -----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             -----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence                 123578999999999998653  2466777765

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.21  E-value=8.9e-12  Score=96.32  Aligned_cols=79  Identities=22%  Similarity=0.233  Sum_probs=67.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+|+||||+|.||+.+++.|.++|++|++++|+     .++.+.+...  ...++.++.+|+.|.+++.+++.++|+|||
T Consensus        24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHhhccchhhcccc-----hHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            589999999999999999999999999999999     6665444332  234677889999999999999999999999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      ++|...
T Consensus        99 ~Ag~g~  104 (191)
T d1luaa1          99 AGAIGL  104 (191)
T ss_dssp             CCCTTC
T ss_pred             cCcccc
Confidence            998643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.05  E-value=1.7e-10  Score=95.23  Aligned_cols=203  Identities=8%  Similarity=0.032  Sum_probs=104.4

Q ss_pred             ceEEEEccCC--cchHHHHHHHHhCCCCEEEEecCCCCC---------CCcchhhHhhhhcC---CcEEEECCC------
Q 039623            2 AATLIIGGTG--YIGKKILEASVKAGHPTFALVRESTAS---------DPVKGKLIEIFKNL---GVNVLYGDL------   61 (292)
Q Consensus         2 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~~---~v~~v~~D~------   61 (292)
                      |++|||||+|  .||+.+++.|.++|++|.+.+|+....         ..++.+....-...   .+..+..++      
T Consensus         9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (297)
T d1d7oa_           9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV   88 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence            6799999987  799999999999999999998862100         00000000000001   111222222      


Q ss_pred             ---------------CCHHHH----HHHHccCCEEEEcCcCCC---------------------chhHHHHHHHHHHhCC
Q 039623           62 ---------------QDHESL----IKAIKQVDVVISTVSRGQ---------------------IPEQAKIIAAVKEAGN  101 (292)
Q Consensus        62 ---------------~d~~~~----~~~~~~~d~vi~~a~~~~---------------------~~~~~~l~~a~~~~~~  101 (292)
                                     .+.+.+    .+.+.++|++||+||...                     +.....+.+++.....
T Consensus        89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~  168 (297)
T d1d7oa_          89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN  168 (297)
T ss_dssp             CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhh
Confidence                           222222    223347999999998642                     2223333333332210


Q ss_pred             c-ceee-ccCCCCCCccCCccCCCCcchHHHHHHHHHHHH--------HcCccEEEEecceeccccccccccCCCCCCCC
Q 039623          102 V-KRFL-PSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIE--------AEGIQYTYVSCNCFAGYFLPTLAQIGAPAPPR  171 (292)
Q Consensus       102 ~-~~~i-~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~--------~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~  171 (292)
                      . ...+ .++.+.....    ......|+.+|..+..+.+        ..|+++..|.||++...........      .
T Consensus       169 ~~g~~~~~~~~~~~~~~----~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~------~  238 (297)
T d1d7oa_         169 PGGASISLTYIASERII----PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI------D  238 (297)
T ss_dssp             EEEEEEEEECGGGTSCC----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH------H
T ss_pred             cCCcceeeeehhhcccc----cccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC------H
Confidence            0 1111 1221111110    1123345558887766654        2589999999999876533211000      0


Q ss_pred             CceeecCCCcceEEeeccchHHHHHHHhhcCCc--CCCceEEEcC
Q 039623          172 EKVTIFGDGNAGAVYNKEDDIATYTINSIDGPR--TLNKTLYIRP  214 (292)
Q Consensus       172 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~  214 (292)
                      ..............+...+|+|.+++.++....  ..|+++.+.|
T Consensus       239 ~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDG  283 (297)
T d1d7oa_         239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            000000000011235688999999999997542  3467777764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.88  E-value=7.7e-09  Score=74.42  Aligned_cols=95  Identities=18%  Similarity=0.233  Sum_probs=74.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++++     +++.+.+..  ..++.++.||.+|++.+.++ ++++|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d-----~~~~~~~~~--~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCC-----hhhhhhhhh--hhhhhhccCcccchhhhhhcChhhhhhhccc
Confidence            89999996 999999999999999999999998     776654433  23789999999999999887 5689999986


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ....  .....+...++..+ .+++|.
T Consensus        73 t~~d--~~N~~~~~~~k~~~-~~~iI~   96 (132)
T d1lssa_          73 TGKE--EVNLMSSLLAKSYG-INKTIA   96 (132)
T ss_dssp             CSCH--HHHHHHHHHHHHTT-CCCEEE
T ss_pred             CCcH--HHHHHHHHHHHHcC-CceEEE
Confidence            6543  22334445566777 666663

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.71  E-value=5.5e-09  Score=87.26  Aligned_cols=32  Identities=19%  Similarity=0.073  Sum_probs=28.4

Q ss_pred             eEEEEc--cCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            3 ATLIIG--GTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         3 ~vlItG--atG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      -.||||  ++..||+.+++.|.++|.+|.+..|.
T Consensus         4 VAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~   37 (329)
T d1uh5a_           4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECG
T ss_pred             EEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCc
Confidence            479999  55689999999999999999998876

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.61  E-value=1.8e-07  Score=67.10  Aligned_cols=95  Identities=16%  Similarity=0.273  Sum_probs=72.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |+++|.| .|.+|+.+++.|.+.|++|++++.+     +++.   +.+...+...+.+|.++++.+.++ +.++|.+|-+
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d-----~~~~---~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDIN-----EEKV---NAYASYATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESC-----HHHH---HHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCc-----HHHH---HHHHHhCCcceeeecccchhhhccCCccccEEEEE
Confidence            5789998 4999999999999999999999998     6665   444567789999999999999887 6789999877


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      .+... .....+...++..+ ..+++.
T Consensus        72 ~~~~~-~~~~~~~~~~~~~~-~~~iia   96 (134)
T d2hmva1          72 IGANI-QASTLTTLLLKELD-IPNIWV   96 (134)
T ss_dssp             CCSCH-HHHHHHHHHHHHTT-CSEEEE
T ss_pred             cCchH-HhHHHHHHHHHHcC-CCcEEe
Confidence            76542 22333333444555 566653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.49  E-value=8.1e-07  Score=66.77  Aligned_cols=89  Identities=18%  Similarity=0.241  Sum_probs=68.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+|+|.|| |.+|+++++.|.++||+|++.+|+     .++.+.+..- .........+..+.......+...|.++.+.
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~-----~~~a~~l~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHTT-CTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----hHHHHHHHhc-ccccccccccccchhhhHhhhhccceeEeec
Confidence            68999996 999999999999999999999999     7777655442 2345556667777788888888899999776


Q ss_pred             cCCCchhHHHHHHHHHHhC
Q 039623           82 SRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~  100 (292)
                      +.   .....++..+.+.+
T Consensus        76 ~~---~~~~~~~~~~~~~~   91 (182)
T d1e5qa1          76 PY---TFHATVIKSAIRQK   91 (182)
T ss_dssp             CG---GGHHHHHHHHHHHT
T ss_pred             cc---hhhhHHHHHHHhhc
Confidence            53   34455666666665

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=8.2e-07  Score=64.26  Aligned_cols=91  Identities=18%  Similarity=0.246  Sum_probs=58.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-C---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-H---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+||.|+||||++|+.+++.|+++. |   +++.+.++.+..   +.  .. .....  ....++.+.+    .++++|+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g---~~--~~-~~~~~--~~~~~~~~~~----~~~~~Di   68 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ---AA--PS-FGGTT--GTLQDAFDLE----ALKALDI   68 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS---BC--CG-GGTCC--CBCEETTCHH----HHHTCSE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccc---cc--cc-ccCCc--eeeecccchh----hhhcCcE
Confidence            8999999999999999999888763 3   455565553321   11  01 11111  1122233433    3568999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +|.+++   -...+.+...+.+.| .+.+|.
T Consensus        69 vF~a~~---~~~s~~~~~~~~~~g-~~~~VI   95 (146)
T d1t4ba1          69 IVTCQG---GDYTNEIYPKLRESG-WQGYWI   95 (146)
T ss_dssp             EEECSC---HHHHHHHHHHHHHTT-CCCEEE
T ss_pred             EEEecC---chHHHHhhHHHHhcC-CCeecc
Confidence            999987   356777788888888 664544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.16  E-value=8.6e-06  Score=58.66  Aligned_cols=92  Identities=18%  Similarity=0.155  Sum_probs=63.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCC-cEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLG-VNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      .||.|+||+|.+|++++-.|...|.  ++..++.+     +.+...+ ++.+.. ......-+ ...+..+.++++|+|+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~-----~~~~~a~-Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivV   73 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA-----HTPGVAA-DLSHIETRATVKGYL-GPEQLPDCLKGCDVVV   73 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS-----SHHHHHH-HHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEecc-----ccchhhH-HHhhhhhhcCCCeEE-cCCChHHHhCCCCEEE
Confidence            4899999999999999999988883  67888876     4444332 222221 11111112 2345567889999999


Q ss_pred             EcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           79 STVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      .++|...             ....+.+++.+.+++
T Consensus        74 itag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~  108 (144)
T d1mlda1          74 IPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC  108 (144)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             ECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcC
Confidence            9999755             566778888888886

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=98.09  E-value=2.6e-06  Score=63.56  Aligned_cols=76  Identities=25%  Similarity=0.194  Sum_probs=46.6

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      |+||.|+||||++|+.|++.|.++. .++..+..+++.  ..+...+..   ...........+.+   +..+++|+++.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~a--G~~i~~~~p---~~~~~~~~~~~~~~---~~~~~~dvvf~   72 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYA--GKKLEEIFP---STLENSILSEFDPE---KVSKNCDVLFT   72 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT--TSBHHHHCG---GGCCCCBCBCCCHH---HHHHHCSEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccC--CCcccccCc---hhhccccccccCHh---HhccccceEEE
Confidence            9999999999999999999999875 577766544221  222221111   00111112222433   34457999998


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      +.+..
T Consensus        73 a~p~~   77 (176)
T d1vkna1          73 ALPAG   77 (176)
T ss_dssp             CCSTT
T ss_pred             ccccH
Confidence            87754

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=3.1e-05  Score=56.36  Aligned_cols=96  Identities=16%  Similarity=0.223  Sum_probs=71.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcch-hhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKG-KLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      .|+|.|. |-+|+.+++.|.+.|++|+++..+     +++. +..+.....++.++.||.+|++.+.++ ++.++++|-+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d-----~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNL-----PEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECC-----CHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEecc-----chhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence            4889995 999999999999999999999987     5443 334555567999999999999998776 4579999987


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceee
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .+..  .....++..+++.+...+++
T Consensus        79 ~~~d--~~n~~~~~~~r~~~~~~~ii  102 (153)
T d1id1a_          79 SDND--ADNAFVVLSAKDMSSDVKTV  102 (153)
T ss_dssp             SSCH--HHHHHHHHHHHHHTSSSCEE
T ss_pred             cccH--HHHHHHHHHHHHhCCCCceE
Confidence            7654  23344445566654233444

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.05  E-value=6.3e-06  Score=61.91  Aligned_cols=92  Identities=20%  Similarity=0.230  Sum_probs=53.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEec-CCCCCCCcchhhHh-hhhc-CCcEEEECCCCCHHHHHHHHccCCE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVR-ESTASDPVKGKLIE-IFKN-LGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r-~~~~~~~~~~~~~~-~~~~-~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |+||.|.|||||+|+.|++.|.++. +++..+.. ++......+..... .+.. ........+  +   ......++|+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~dv   75 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMS--D---VRDFSADVDV   75 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEES--C---GGGTCTTCCE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccch--h---hhhhhcccce
Confidence            9999999999999999999999984 67766643 32222122221111 1111 111111111  2   1123457899


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHhC
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +|.+.+.   .....+.....+.+
T Consensus        76 vf~alp~---~~s~~~~~~~~~~~   96 (179)
T d2g17a1          76 VFLATAH---EVSHDLAPQFLQAG   96 (179)
T ss_dssp             EEECSCH---HHHHHHHHHHHHTT
T ss_pred             eeccccc---hhHHHHhhhhhhcC
Confidence            9998774   34455556666666

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.04  E-value=1.1e-05  Score=58.08  Aligned_cols=90  Identities=20%  Similarity=0.273  Sum_probs=54.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-C---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-H---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |||.|.||||++|+.|++.|+++. |   ++..++.+.+   ..|..   .+.....  ...+..+.    ..++++|+|
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~---~gk~~---~~~~~~~--~~~~~~~~----~~~~~~Dvv   68 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI---GVPAP---NFGKDAG--MLHDAFDI----ESLKQLDAV   68 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCC---SSBCC---CSSSCCC--BCEETTCH----HHHTTCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccc---ccccc---ccCCcce--eeecccch----hhhccccEE
Confidence            689999999999999999998764 4   3444443322   22211   0101111  11122233    345789999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      |.|.+.   ..++.+...+.+.| .+.+|.
T Consensus        69 F~alp~---~~s~~~~~~l~~~g-~~~~VI   94 (147)
T d1mb4a1          69 ITCQGG---SYTEKVYPALRQAG-WKGYWI   94 (147)
T ss_dssp             EECSCH---HHHHHHHHHHHHTT-CCSEEE
T ss_pred             EEecCc---hHHHHHhHHHHHcC-CceEEE
Confidence            998874   45677778888888 664443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.03  E-value=1.6e-06  Score=66.10  Aligned_cols=40  Identities=25%  Similarity=0.345  Sum_probs=35.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI   46 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~   46 (292)
                      |||.|+||+|.+|+.|++.|.++||+|.+.+|+     +++.+.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~-----~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR-----EEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS-----HHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHH
Confidence            789999989999999999999999999999998     6665444

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.03  E-value=4.6e-06  Score=61.62  Aligned_cols=93  Identities=19%  Similarity=0.145  Sum_probs=62.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh----------hcCCcEEEECCCCCHHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF----------KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      |+||.|.| .|.+|+.+++.|+++||+|++.+|+     +++.+.+...          .....+++..-+.+......+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~-----~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v   74 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV-----QSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL   74 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECc-----hhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHH
Confidence            89999999 8999999999999999999999998     5544332211          012234455555555555444


Q ss_pred             Hc----------cCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           71 IK----------QVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~~----------~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +.          .=++||++.... ...++.+.+.+++.+
T Consensus        75 ~~~~~~~~~~l~~g~iiid~st~~-p~~~~~~~~~~~~~g  113 (162)
T d3cuma2          75 YLDDDGLLAHIAPGTLVLECSTIA-PTSARKIHAAARERG  113 (162)
T ss_dssp             HHSTTCHHHHSCTTCEEEECSCCC-HHHHHHHHHHHHHTT
T ss_pred             HhccccccccCCCCCEEEECCCCC-HHHHHHHHHHHHHCC
Confidence            32          124566555544 466777778887777

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.01  E-value=5.6e-06  Score=60.40  Aligned_cols=34  Identities=29%  Similarity=0.427  Sum_probs=32.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+||+|+|+.|.+|+.+++.|.++||+|.+.+|+
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~   42 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRE   42 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccc
Confidence            6799999999999999999999999999999997

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=5.3e-06  Score=61.39  Aligned_cols=83  Identities=18%  Similarity=0.266  Sum_probs=53.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCC---cEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLG---VNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~---v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |||+|+|+ |.+|+.++..|.+.||+|++++|+..     +.+.........   ...+..+  +.    +.+.++|+||
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~D~ii   68 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ-----PYCSVNLVETDGSIFNESLTAN--DP----DFLATSDLLL   68 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC-----SEEEEEEECTTSCEEEEEEEES--CH----HHHHTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH-----HhhhhccccCCccccccccccc--hh----hhhcccceEE
Confidence            89999996 99999999999999999999999843     221111111111   1111112  22    3455899999


Q ss_pred             EcCcCCCchhHHHHHHHHHHh
Q 039623           79 STVSRGQIPEQAKIIAAVKEA   99 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~   99 (292)
                      .+.....   +..+++.+...
T Consensus        69 i~vka~~---~~~~~~~l~~~   86 (167)
T d1ks9a2          69 VTLKAWQ---VSDAVKSLAST   86 (167)
T ss_dssp             ECSCGGG---HHHHHHHHHTT
T ss_pred             Eeecccc---hHHHHHhhccc
Confidence            9887543   45555555443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=1.5e-05  Score=57.43  Aligned_cols=89  Identities=11%  Similarity=0.107  Sum_probs=57.2

Q ss_pred             ceEEEEccCCcchHHHHHHHH-hCC--CCEEEEecCCCCCCCcchhhHhhhhcC----CcEEEECCCCCHHHHHHHHccC
Q 039623            2 AATLIIGGTGYIGKKILEASV-KAG--HPTFALVRESTASDPVKGKLIEIFKNL----GVNVLYGDLQDHESLIKAIKQV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~-~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~----~v~~v~~D~~d~~~~~~~~~~~   74 (292)
                      |||.|+|++|.+|++++-.|. +.+  .++..++..+     .......++.+.    ....+ ..-.+   + +.++++
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-----~~~g~a~Dl~h~~~~~~~~~~-~~~~~---~-~~~~~a   70 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-----VTPGVAVDLSHIPTAVKIKGF-SGEDA---T-PALEGA   70 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-----THHHHHHHHHTSCSSCEEEEE-CSSCC---H-HHHTTC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-----cchhHHHHHHCCccccCCcEE-EcCCC---c-cccCCC
Confidence            799999999999999998775 434  6788887652     111111223221    12222 22223   2 357799


Q ss_pred             CEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           75 DVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        75 d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      |+||.++|...             ....+.+.+.+.+.+
T Consensus        71 DvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~  109 (145)
T d2cmda1          71 DVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC  109 (145)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             CEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhC
Confidence            99999999765             455667777777776

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=3.7e-05  Score=57.70  Aligned_cols=77  Identities=17%  Similarity=0.178  Sum_probs=58.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhh----h-hcCCcEEEECCCCCHHHHHHHHccCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEI----F-KNLGVNVLYGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~-~~~~v~~v~~D~~d~~~~~~~~~~~d   75 (292)
                      ++|+|+| +|..|++++..|.+.|. ++++..|+     +++.+.+..    + ..........|+.+.+.+.+.+..+|
T Consensus        19 k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   92 (182)
T d1vi2a1          19 KTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRR-----DEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASAD   92 (182)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECS-----STTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred             CEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccc-----hHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccc
Confidence            5799999 58899999999999985 78888888     443332222    2 23345566789999999999999999


Q ss_pred             EEEEcCcCC
Q 039623           76 VVISTVSRG   84 (292)
Q Consensus        76 ~vi~~a~~~   84 (292)
                      +|||+.+..
T Consensus        93 iiIN~Tp~G  101 (182)
T d1vi2a1          93 ILTNGTKVG  101 (182)
T ss_dssp             EEEECSSTT
T ss_pred             eeccccCCc
Confidence            999997643

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.90  E-value=1.1e-05  Score=59.32  Aligned_cols=39  Identities=26%  Similarity=0.282  Sum_probs=34.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI   46 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~   46 (292)
                      |||.|.| .|.+|+.+++.|+++||+|++.+|+     +++.+.+
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~-----~~~~~~~   39 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRN-----PEAIADV   39 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCC-----cchhHHH
Confidence            7899999 7999999999999999999999998     5555443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.86  E-value=5.4e-05  Score=56.44  Aligned_cols=75  Identities=20%  Similarity=0.211  Sum_probs=48.7

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      +.+|.|+| .|.+|..+++.|+++||+|++.+|+     +++.+.+...........-  ....+++.+.+.++|.++.+
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~~~~~~--a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDFLANEAKGTKVLG--AHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHHHHTTTTTSSCEE--CSSHHHHHHHBCSSCEEEEC
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHHhccccccccc--hhhhhhhhhhhcccceEEEe
Confidence            36899999 7999999999999999999999999     6666544332111111111  12344455555556666555


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      ...
T Consensus        74 ~~~   76 (176)
T d2pgda2          74 VKA   76 (176)
T ss_dssp             SCT
T ss_pred             cCc
Confidence            443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.85  E-value=9e-06  Score=60.14  Aligned_cols=79  Identities=13%  Similarity=0.169  Sum_probs=54.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |||.|.| .|.+|+.+++.|.+.||+|++.+|+     ++..+...   ..++ .....++       ++++++|+||.+
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~-----~~~~~~a~---~~~~~~~~~~~~-------~~~~~~DiIila   64 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQ-----QSTCEKAV---ERQLVDEAGQDL-------SLLQTAKIIFLC   64 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---HTTSCSEEESCG-------GGGTTCSEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECC-----chHHHHHH---Hhhccceeeeec-------cccccccccccc
Confidence            7899998 6999999999999999999999998     55443322   2232 1221121       356789999987


Q ss_pred             CcCCCchhHHHHHHHHHHh
Q 039623           81 VSRGQIPEQAKIIAAVKEA   99 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~   99 (292)
                      ..   ......+++...+.
T Consensus        65 vp---~~~~~~vl~~l~~~   80 (165)
T d2f1ka2          65 TP---IQLILPTLEKLIPH   80 (165)
T ss_dssp             SC---HHHHHHHHHHHGGG
T ss_pred             Cc---Hhhhhhhhhhhhhh
Confidence            65   34455566655443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.84  E-value=8.1e-06  Score=58.87  Aligned_cols=83  Identities=13%  Similarity=0.169  Sum_probs=50.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC---CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH---PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|.|.||||++|+.+++.|.+++|   ++..+..+.+.  ..+.   .   ...-+....++.+     ..+.++|++|
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~--Gk~i---~---~~~~~~~~~~~~~-----~~~~~~d~vf   69 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA--GQRM---G---FAESSLRVGDVDS-----FDFSSVGLAF   69 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT--TCEE---E---ETTEEEECEEGGG-----CCGGGCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC--Ccce---e---eccccchhccchh-----hhhccceEEE
Confidence            7899999999999999999976554   66666544221  1111   0   1111122222211     2245789999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      .+++.   .....+...+.+.+
T Consensus        70 ~a~p~---~~s~~~~~~~~~~g   88 (144)
T d2hjsa1          70 FAAAA---EVSRAHAERARAAG   88 (144)
T ss_dssp             ECSCH---HHHHHHHHHHHHTT
T ss_pred             ecCCc---chhhhhccccccCC
Confidence            88763   44566666666666

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.84  E-value=1.6e-05  Score=59.59  Aligned_cols=89  Identities=18%  Similarity=0.096  Sum_probs=60.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-----cCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-----NLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      |||.|+|+ |.+|..++..|.++||+|.+++|+     +++.+.+....     ..+.+..........++.+.++++|+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~   75 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADV   75 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCE
Confidence            78999995 999999999999999999999998     55554443221     11122222221112235678889999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHHh
Q 039623           77 VISTVSRGQIPEQAKIIAAVKEA   99 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~~   99 (292)
                      ||.+....   ....+++.++++
T Consensus        76 iii~v~~~---~~~~~~~~i~~~   95 (184)
T d1bg6a2          76 ILIVVPAI---HHASIAANIASY   95 (184)
T ss_dssp             EEECSCGG---GHHHHHHHHGGG
T ss_pred             EEEEEchh---HHHHHHHHhhhc
Confidence            99987643   456666666554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=4.9e-05  Score=50.19  Aligned_cols=85  Identities=16%  Similarity=0.205  Sum_probs=61.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      +||+|.|. |-.|..+++.|.+.|++|++.+.+....   ..   + ....++.+..+.. +.    ..+.++|.||-..
T Consensus         6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~---~~---~-~~~~~~~~~~~~~-~~----~~~~~~d~vi~SP   72 (93)
T d2jfga1           6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPP---GL---D-KLPEAVERHTGSL-ND----EWLMAADLIVASP   72 (93)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCT---TG---G-GSCTTSCEEESBC-CH----HHHHHCSEEEECT
T ss_pred             CEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCch---hH---H-HHhhccceeeccc-ch----hhhccCCEEEECC
Confidence            57999995 8899999999999999999999874422   11   1 1134566666654 22    2356789999877


Q ss_pred             cCCCchhHHHHHHHHHHhCCcc
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~  103 (292)
                      |.   .....+++.|++++ ++
T Consensus        73 Gi---~~~~~~~~~a~~~g-i~   90 (93)
T d2jfga1          73 GI---ALAHPSLSAAADAG-IE   90 (93)
T ss_dssp             TS---CTTSHHHHHHHHTT-CE
T ss_pred             CC---CCCCHHHHHHHHcC-CC
Confidence            74   45567888888887 65

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.82  E-value=2.2e-05  Score=59.02  Aligned_cols=86  Identities=14%  Similarity=0.218  Sum_probs=59.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEE--ECCCCCHHHHHHHHc--cCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVL--YGDLQDHESLIKAIK--QVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v--~~D~~d~~~~~~~~~--~~d~vi   78 (292)
                      +|||+||+|.+|...++.....|.+|++++|+     ++|.+.+..   .+...+  ..|-...+.+.+...  ++|+||
T Consensus        32 ~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~-----~~~~~~~~~---~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          32 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLKQ---IGFDAAFNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHH---TTCSEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             EEEEEeCCCchhHHHHHHHHccCCEEEEeCCC-----HHHHHHHHh---hhhhhhcccccccHHHHHHHHhhcCCCceeE
Confidence            69999999999999999999999999999998     666655444   343332  233333455545544  699999


Q ss_pred             EcCcCCCchhHHHHHHHHHHh
Q 039623           79 STVSRGQIPEQAKIIAAVKEA   99 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~   99 (292)
                      ++.|.   ......++.++..
T Consensus       104 D~vG~---~~~~~~~~~l~~~  121 (182)
T d1v3va2         104 DNVGG---EFLNTVLSQMKDF  121 (182)
T ss_dssp             ESSCH---HHHHHHGGGEEEE
T ss_pred             EecCc---hhhhhhhhhccCC
Confidence            99983   3344445554433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.82  E-value=2.9e-05  Score=56.87  Aligned_cols=86  Identities=19%  Similarity=0.330  Sum_probs=61.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|||+|+ |-+|+.+++.|...|. ++++..|+     .+|.+.+..-  .+.+.+     +.+++.+.+..+|+||.+
T Consensus        25 ~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt-----~~ka~~l~~~--~~~~~~-----~~~~~~~~l~~~Divi~a   91 (159)
T d1gpja2          25 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELARD--LGGEAV-----RFDELVDHLARSDVVVSA   91 (159)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHHHH--HTCEEC-----CGGGHHHHHHTCSEEEEC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCc-----HHHHHHHHHh--hhcccc-----cchhHHHHhccCCEEEEe
Confidence            68999996 9999999999999997 58888888     6666544332  233332     345677888999999999


Q ss_pred             CcCCC-chhHHHHHHHHHHhC
Q 039623           81 VSRGQ-IPEQAKIIAAVKEAG  100 (292)
Q Consensus        81 a~~~~-~~~~~~l~~a~~~~~  100 (292)
                      .+... +.....+-..+++..
T Consensus        92 tss~~~ii~~~~i~~~~~~r~  112 (159)
T d1gpja2          92 TAAPHPVIHVDDVREALRKRD  112 (159)
T ss_dssp             CSSSSCCBCHHHHHHHHHHCS
T ss_pred             cCCCCccccHhhhHHHHHhcc
Confidence            98766 333344444555543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.80  E-value=1.8e-05  Score=58.88  Aligned_cols=73  Identities=18%  Similarity=0.225  Sum_probs=52.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      .+|||+||+|-+|...++.+...|.+|++++++     +++.+.++.+   +.+.+. |..+...-.....++|+||.+.
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~-----~~~~~~~~~l---Ga~~~i-~~~~~~~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLAL---GAEEAA-TYAEVPERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHHT---TCSEEE-EGGGHHHHHHHTTSEEEEEECS
T ss_pred             CEEEEEeccccchhhhhhhhccccccccccccc-----cccccccccc---ccceee-ehhhhhhhhhcccccccccccc
Confidence            369999999999999999999999999999988     6666554443   443332 4444332223345799999988


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      |.
T Consensus       100 G~  101 (171)
T d1iz0a2         100 GK  101 (171)
T ss_dssp             CT
T ss_pred             ch
Confidence            73

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=1.7e-05  Score=50.17  Aligned_cols=42  Identities=14%  Similarity=0.244  Sum_probs=36.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI   48 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~   48 (292)
                      ++|+|+||+|-+|...++.+...|++|++++++     ++|.+.++.
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s-----~~k~~~~~~   74 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKS   74 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHH
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECC-----HHHHHHHHH
Confidence            369999999999999999999999999999998     777766554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.77  E-value=7.5e-05  Score=53.57  Aligned_cols=92  Identities=21%  Similarity=0.137  Sum_probs=59.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchh----hHhhh---hcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGK----LIEIF---KNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~----~~~~~---~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |||.|+||+|.+|+.++-.|...|  .++..++++..   .++.+    .+.+.   ...+++.....-.|.    +.++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~---~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~   73 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS---INKLEGLREDIYDALAGTRSDANIYVESDENL----RIID   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG---HHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhh---hHhhhcccccchhcccccccCCccccCCcchH----HHhc
Confidence            789999999999999999999988  48888888722   12221    11221   122333332211122    3577


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+||.+||...             ....+.+++...+++
T Consensus        74 ~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~  114 (145)
T d1hyea1          74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC  114 (145)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC
Confidence            9999999999765             344566666666665

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.76  E-value=7.9e-05  Score=53.58  Aligned_cols=86  Identities=19%  Similarity=0.235  Sum_probs=59.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhh----Hhh--hhcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKL----IEI--FKNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~----~~~--~~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||.|+|+ |++|..++..|...|  .++..++++     .++.+-    +++  ..........+|+.       .+++
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~-----~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------~~~~   72 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVV-----KDRTKGDALDLEDAQAFTAPKKIYSGEYS-------DCKD   72 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHGGGGGSCCCEEEECCGG-------GGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecc-----cchhHHHHHHHhccccccCCceEeeccHH-------Hhcc
Confidence            68999995 999999999999987  589999987     443321    111  12233455566642       3679


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+|+.++|...             ....+.+++.+.+++
T Consensus        73 adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~  112 (146)
T d1ez4a1          73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG  112 (146)
T ss_dssp             CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT
T ss_pred             ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999998765             445666677777765

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=2.2e-05  Score=58.46  Aligned_cols=84  Identities=13%  Similarity=0.211  Sum_probs=57.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH---HHHHHHc--cCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE---SLIKAIK--QVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~---~~~~~~~--~~d~v   77 (292)
                      +|||+||+|.+|...++.+...|.+|++++++     ++|.+.+..   .+...+ .|..+.+   .+.+...  ++|+|
T Consensus        31 ~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~-----~~~~~~~~~---~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v  101 (174)
T d1yb5a2          31 SVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQ---NGAHEV-FNHREVNYIDKIKKYVGEKGIDII  101 (174)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHH---TTCSEE-EETTSTTHHHHHHHHHCTTCEEEE
T ss_pred             EEEEEeccccccccccccccccCccccccccc-----ccccccccc---cCcccc-cccccccHHHHhhhhhccCCceEE
Confidence            69999999999999999999999999999987     666655444   344332 2444433   3333433  58999


Q ss_pred             EEcCcCCCchhHHHHHHHHHH
Q 039623           78 ISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~   98 (292)
                      |.+.|.   ......++.+++
T Consensus       102 ~d~~g~---~~~~~~~~~l~~  119 (174)
T d1yb5a2         102 IEMLAN---VNLSKDLSLLSH  119 (174)
T ss_dssp             EESCHH---HHHHHHHHHEEE
T ss_pred             eecccH---HHHHHHHhccCC
Confidence            999873   233444444433

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=4.1e-05  Score=56.74  Aligned_cols=71  Identities=13%  Similarity=0.130  Sum_probs=50.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| +|..+++++..|.+.|.+|+++.|+     .+|.+.+.............++.+.     ....+|+|||+.
T Consensus        19 k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt-----~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~T   87 (170)
T d1nyta1          19 LRILLIG-AGGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINAT   87 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECC
T ss_pred             CEEEEEC-CcHHHHHHHHHhcccceEEEeccch-----HHHHHHHHHHHhhcccccccccccc-----cccccceeeccc
Confidence            5799999 5889999999999999999999998     7777655544332222333333221     124689999997


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      +.
T Consensus        88 p~   89 (170)
T d1nyta1          88 SS   89 (170)
T ss_dssp             SC
T ss_pred             cc
Confidence            54

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.61  E-value=0.00015  Score=53.50  Aligned_cols=90  Identities=14%  Similarity=0.197  Sum_probs=56.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhhhcCC-cEEEECCCCCHHHHHHHHccCCEE
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIFKNLG-VNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      |++|+|.| .|.+|..+++.|.+.|+  +|++.+|+     ++..+...   ..+ +.....+...     ....++|.|
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-----~~~~~~a~---~~~~~~~~~~~~~~-----~~~~~~dlI   66 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISKAV---DLGIIDEGTTSIAK-----VEDFSPDFV   66 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHH---HTTSCSEEESCGGG-----GGGTCCSEE
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-----hHHHHHHH---Hhhcchhhhhhhhh-----hhccccccc
Confidence            88999999 69999999999999996  67788887     44443322   222 2222333221     122368999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      |.+..   ......+++.....-+-..++.
T Consensus        67 ila~p---~~~~~~vl~~l~~~~~~~~ii~   93 (171)
T d2g5ca2          67 MLSSP---VRTFREIAKKLSYILSEDATVT   93 (171)
T ss_dssp             EECSC---HHHHHHHHHHHHHHSCTTCEEE
T ss_pred             cccCC---chhhhhhhhhhhcccccccccc
Confidence            98877   3455566665554422344443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.61  E-value=8.3e-05  Score=54.95  Aligned_cols=88  Identities=23%  Similarity=0.253  Sum_probs=58.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCC--CCHHHHHHHHc-----cCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL--QDHESLIKAIK-----QVD   75 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~--~d~~~~~~~~~-----~~d   75 (292)
                      +|+|+| +|-+|...++.+...|.+|++++++     ++|.+..+.+. ... .+..|-  .+.+.+.+.++     ++|
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~-----~~r~~~a~~~g-a~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D  100 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARS-----PRRLEVAKNCG-ADV-TLVVDPAKEEESSIIERIRSAIGDLPN  100 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT-CSE-EEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchH-----HHHHHHHHHcC-CcE-EEeccccccccchhhhhhhcccccCCc
Confidence            699998 6999999999999999999999998     77776655542 122 222332  24444444443     589


Q ss_pred             EEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           76 VVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +||.++|..  ......++.++..|
T Consensus       101 ~vid~~g~~--~~~~~a~~~~~~~G  123 (170)
T d1e3ja2         101 VTIDCSGNE--KCITIGINITRTGG  123 (170)
T ss_dssp             EEEECSCCH--HHHHHHHHHSCTTC
T ss_pred             eeeecCCCh--HHHHHHHHHHhcCC
Confidence            999999854  23344455555444

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.58  E-value=1.1e-05  Score=60.99  Aligned_cols=85  Identities=11%  Similarity=0.164  Sum_probs=56.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-----cCCcEEEECCCCCHHHHHHHHccCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-----NLGVNVLYGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~v~~v~~D~~d~~~~~~~~~~~d   75 (292)
                      |+||+|+| +|..|++++..|.+.||+|++.+|+     ++..+.+..-.     .+++.. .-++.-..++.++++++|
T Consensus         7 m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~-----~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad   79 (189)
T d1n1ea2           7 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN-----EEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAE   79 (189)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC-----HHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCS
T ss_pred             eceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec-----HHHHHHHhhccccccccccccc-ccccccchhhhhccCCCC
Confidence            56799999 6999999999999999999999998     55554443211     112211 111211234677889999


Q ss_pred             EEEEcCcCCCchhHHHHHHH
Q 039623           76 VVISTVSRGQIPEQAKIIAA   95 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a   95 (292)
                      .||.+.+.   .....+++.
T Consensus        80 ~iiiavPs---~~~~~~~~~   96 (189)
T d1n1ea2          80 IILFVIPT---QFLRGFFEK   96 (189)
T ss_dssp             CEEECSCH---HHHHHHHHH
T ss_pred             EEEEcCcH---HHHHHHHHH
Confidence            99987763   344444444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.57  E-value=1.3e-05  Score=58.57  Aligned_cols=91  Identities=13%  Similarity=-0.056  Sum_probs=53.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-C----E--EEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-P----T--FALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~----V--~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      |||.|+||+|++|++++-.|...+. .    +  ..+.-...   .++.+.....    .......+...-    ...+.
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~   77 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLLAGLEATD----DPKVA   77 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEEEES----CHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccc---hhhHcCchhhhhccccccccccccCC----chhhh
Confidence            4899999999999999999988752 1    1  12211100   2222222111    112233333321    23467


Q ss_pred             HccCCEEEEcCcCCC-------------chhHHHHHHHHHHh
Q 039623           71 IKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEA   99 (292)
Q Consensus        71 ~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~   99 (292)
                      ++++|+||.++|...             ....+.+.+.+.+.
T Consensus        78 ~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~  119 (154)
T d1y7ta1          78 FKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV  119 (154)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            889999999999866             34556666666664

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.56  E-value=0.00017  Score=51.90  Aligned_cols=86  Identities=22%  Similarity=0.356  Sum_probs=58.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchh--h--Hhh---hhcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGK--L--IEI---FKNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~--~--~~~---~~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||.|+|| |++|+.++..|...|.  ++..++++     +++.+  .  +.+   +....+.+...|.       +.++
T Consensus         7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~-----~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~   73 (148)
T d1ldna1           7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDAN-----ESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCR   73 (148)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTT
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeec-----cccccchhccHhhCccccCCCeEEEECCH-------HHhc
Confidence            37999996 9999999999999874  68888887     44421  1  111   1123445544453       3477


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+|+.++|...             ....+.+++.+.+++
T Consensus        74 daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~  114 (148)
T d1ldna1          74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG  114 (148)
T ss_dssp             TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT
T ss_pred             cceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhC
Confidence            8999999999765             344566666766665

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00024  Score=48.30  Aligned_cols=84  Identities=14%  Similarity=0.315  Sum_probs=61.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      .||.|+| .|.+|+-++....+.|+++++++.++...  ..        ...-.++.+|+.|.+.+.+...  ++|+|-.
T Consensus        12 ~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~P--A~--------~va~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          12 TRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAP--AM--------HVAHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCG--GG--------GGSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCc--hh--------hcCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            4799999 69999999999999999999999875432  11        1234788999999999988775  5799965


Q ss_pred             cCcCCCchhHHHHHHHHHHhC
Q 039623           80 TVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      -.-...    ...++.+.+.+
T Consensus        81 E~EnI~----~~~L~~le~~g   97 (111)
T d1kjqa2          81 EIEAIA----TDMLIQLEEEG   97 (111)
T ss_dssp             CSSCSC----HHHHHHHHHTT
T ss_pred             EecCcC----HHHHHHHHHCC
Confidence            433332    34455555554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.54  E-value=6.2e-05  Score=55.98  Aligned_cols=73  Identities=16%  Similarity=0.278  Sum_probs=50.1

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC-HHHHHHHHc--cCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD-HESLIKAIK--QVDVVIS   79 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d-~~~~~~~~~--~~d~vi~   79 (292)
                      +|||+||+|.+|+..++.+...|.+|++.+++     ++|.+.++.+   +.+.+. |..+ .+.......  ++|+||.
T Consensus        34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s-----~~k~~~~~~l---Ga~~vi-~~~~~~~~~~~~~~~~gvD~vid  104 (176)
T d1xa0a2          34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGK-----AAEHDYLRVL---GAKEVL-AREDVMAERIRPLDKQRWAAAVD  104 (176)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----TTCHHHHHHT---TCSEEE-ECC---------CCSCCEEEEEE
T ss_pred             EEEEEeccchHHHHHHHHHHHcCCceEEecCc-----hHHHHHHHhc---ccceee-ecchhHHHHHHHhhccCcCEEEE
Confidence            69999999999999999999999999999998     7777665554   322222 2222 122222222  6999999


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      +.|-.
T Consensus       105 ~vgg~  109 (176)
T d1xa0a2         105 PVGGR  109 (176)
T ss_dssp             CSTTT
T ss_pred             cCCch
Confidence            99854

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.52  E-value=4.8e-05  Score=55.23  Aligned_cols=67  Identities=21%  Similarity=0.169  Sum_probs=50.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||.|.| +|.+|+++++.|++.|+++++..|+     +++.+.+....  ++...    .+   ..++++++|+||.+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~-----~~~~~~l~~~~--g~~~~----~~---~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSS-----LERSKEIAEQL--ALPYA----MS---HQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS-----HHHHHHHHHHH--TCCBC----SS---HHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcCh-----HHhHHhhcccc--ceeee----ch---hhhhhhccceeeeec
Confidence            7899999 8999999999999999999999998     66665543322  22221    12   456677899999887


Q ss_pred             cC
Q 039623           82 SR   83 (292)
Q Consensus        82 ~~   83 (292)
                      .+
T Consensus        66 kp   67 (152)
T d2ahra2          66 KP   67 (152)
T ss_dssp             CG
T ss_pred             ch
Confidence            54

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.51  E-value=5.6e-05  Score=56.61  Aligned_cols=72  Identities=22%  Similarity=0.395  Sum_probs=52.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~v   77 (292)
                      +|||+||+|.+|...++.+...|.+|++++++     +++.+.++.   .+...+ .|..++   +.+.+...  ++|+|
T Consensus        28 ~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~-----~~~~~~l~~---~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v   98 (183)
T d1pqwa_          28 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREMLSR---LGVEYV-GDSRSVDFADEILELTDGYGVDVV   98 (183)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHT---TCCSEE-EETTCSTHHHHHHHHTTTCCEEEE
T ss_pred             EEEEECCCCCcccccchhhccccccceeeecc-----ccccccccc---cccccc-ccCCccCHHHHHHHHhCCCCEEEE
Confidence            69999999999999999999999999999988     666655443   344433 233343   33444433  69999


Q ss_pred             EEcCcC
Q 039623           78 ISTVSR   83 (292)
Q Consensus        78 i~~a~~   83 (292)
                      |.++|.
T Consensus        99 ~d~~g~  104 (183)
T d1pqwa_          99 LNSLAG  104 (183)
T ss_dssp             EECCCT
T ss_pred             Eecccc
Confidence            999983

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.51  E-value=0.00023  Score=49.72  Aligned_cols=73  Identities=19%  Similarity=0.199  Sum_probs=52.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFAL-VRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |||.|.|++|.+|+.+.+.+.+.|+++.+. +++..                                +.+.++|+||.+
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--------------------------------~~~~~~DVvIDF   48 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--------------------------------EELDSPDVVIDF   48 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--------------------------------EECSCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--------------------------------HHhccCCEEEEe
Confidence            689999999999999999998899887654 33210                                012467899876


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceeeccCCC
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFLPSEFG  111 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g  111 (292)
                      ..   -..+...++.|.+++ ++ +|..+.|
T Consensus        49 S~---p~~~~~~l~~~~~~~-~p-~ViGTTG   74 (128)
T d1vm6a3          49 SS---PEALPKTVDLCKKYR-AG-LVLGTTA   74 (128)
T ss_dssp             SC---GGGHHHHHHHHHHHT-CE-EEECCCS
T ss_pred             cC---HHHHHHHHHHHHhcC-CC-EEEEcCC
Confidence            55   456788888888887 54 5544444

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.49  E-value=0.00032  Score=49.09  Aligned_cols=86  Identities=20%  Similarity=0.239  Sum_probs=63.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHH-HccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKA-IKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~-~~~~d~vi~~   80 (292)
                      |.|+|.| -|-+|+.+++.|  +|++|.++..+     +++.   +.+...++.++.||.+|++.+.++ +..++.++-+
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d-----~~~~---~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAED-----ENVR---KKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESC-----TTHH---HHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcc-----hHHH---HHHHhcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            4688999 588999999998  46788888887     5554   334467999999999999988875 4579999976


Q ss_pred             CcCCCchhHHHHHHHHHHhC
Q 039623           81 VSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ....  .....++..+++.+
T Consensus        70 ~~~d--~~n~~~~~~~r~~~   87 (129)
T d2fy8a1          70 LESD--SETIHCILGIRKID   87 (129)
T ss_dssp             CSSH--HHHHHHHHHHHHHC
T ss_pred             ccch--hhhHHHHHHHHHHC
Confidence            6543  33444555566654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00023  Score=52.42  Aligned_cols=74  Identities=15%  Similarity=0.269  Sum_probs=55.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      .+|+|.|+ |-+|...++.+...|.++++++++     +++.+..+.+   +.+.+ .|..+.+......+++|++|.++
T Consensus        32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~-----~~~~~~a~~l---Gad~~-i~~~~~~~~~~~~~~~D~vid~~  101 (168)
T d1uufa2          32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTS-----EAKREAAKAL---GADEV-VNSRNADEMAAHLKSFDFILNTV  101 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHH---TCSEE-EETTCHHHHHTTTTCEEEEEECC
T ss_pred             CEEEEecc-chHHHHHHHHhhcccccchhhccc-----hhHHHHHhcc---CCcEE-EECchhhHHHHhcCCCceeeeee
Confidence            36999995 889999999999999999999887     6666544443   33332 35566666666667899999999


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      |...
T Consensus       102 g~~~  105 (168)
T d1uufa2         102 AAPH  105 (168)
T ss_dssp             SSCC
T ss_pred             ecch
Confidence            8654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.48  E-value=5.1e-05  Score=57.93  Aligned_cols=74  Identities=22%  Similarity=0.227  Sum_probs=50.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCC-------------CCHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL-------------QDHESLI   68 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~-------------~d~~~~~   68 (292)
                      |||.|.| .|++|..++..|.+.||+|++++.+     +++.+.+..-   ...+..-++             .-..++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n-----~~~i~~ln~g---~~p~~e~~~~~~l~~~~~~~~~~~~~~~~   71 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS-----STKIDLINQG---KSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHTT---CCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCC-----HHHHHHhccc---CCcccchhhhhhhhhhhcccccccCCCHH
Confidence            7899998 7999999999999999999999987     5554433211   111111110             0012245


Q ss_pred             HHHccCCEEEEcCcCC
Q 039623           69 KAIKQVDVVISTVSRG   84 (292)
Q Consensus        69 ~~~~~~d~vi~~a~~~   84 (292)
                      +++.++|+++.|.+.+
T Consensus        72 ~~i~~~d~i~i~VpTP   87 (202)
T d1mv8a2          72 KAVLDSDVSFICVGTP   87 (202)
T ss_dssp             HHHHTCSEEEECCCCC
T ss_pred             HHHhhCCEEEEecCcc
Confidence            6677899999999864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00021  Score=51.28  Aligned_cols=34  Identities=32%  Similarity=0.389  Sum_probs=30.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~   34 (292)
                      |++|.|+|+||-||...+.-+.+.  .++|.+++-+
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            899999999999999999988886  4789988765

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00025  Score=54.66  Aligned_cols=73  Identities=14%  Similarity=0.137  Sum_probs=52.8

Q ss_pred             ceEEEEcc----------------CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC--
Q 039623            2 AATLIIGG----------------TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD--   63 (292)
Q Consensus         2 ~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d--   63 (292)
                      ++||||+|                ||.+|.+|++++...|++|+++....+...           +.++..+...-.+  
T Consensus         7 ~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~-----------p~~~~~~~~~t~~~m   75 (223)
T d1u7za_           7 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-----------PPFVKRVDVMTALEM   75 (223)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-----------CTTEEEEECCSHHHH
T ss_pred             CEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc-----------ccccccceehhhHHH
Confidence            57888865                599999999999999999999987654321           3456666554221  


Q ss_pred             HHHHHHHHccCCEEEEcCcCCC
Q 039623           64 HESLIKAIKQVDVVISTVSRGQ   85 (292)
Q Consensus        64 ~~~~~~~~~~~d~vi~~a~~~~   85 (292)
                      .+.+.+.+..+|++|++|+...
T Consensus        76 ~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          76 EAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHhhhccceeEeeeechhh
Confidence            1333344568999999999876

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.45  E-value=0.00016  Score=53.81  Aligned_cols=40  Identities=15%  Similarity=0.199  Sum_probs=35.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHh
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIE   47 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~   47 (292)
                      |||.|.| .|.+|..+++.|+++||+|++.+|+     +++.+.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~-----~~~~~~l~   41 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRT-----YSKSEEFM   41 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHH
Confidence            7899999 8999999999999999999999998     66665443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.44  E-value=0.00024  Score=50.58  Aligned_cols=89  Identities=13%  Similarity=0.080  Sum_probs=56.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchh-hHhhh-----hcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGK-LIEIF-----KNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~~~~~-----~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      .||.|+||+|.+|+.++-.|..++.  ++..++....   .++.+ ...++     ......+..+|..       .+++
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~---~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~   70 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK---EDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAG   70 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG---HHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTT
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCc---ccccceeecchhhcccccCCceEeeCCHH-------Hhhh
Confidence            4899999999999999999999983  5777775311   12211 11111     1334455555532       2579


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+|+.+||...             ....+.+.+.+.+.+
T Consensus        71 aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~  110 (142)
T d1o6za1          71 SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN  110 (142)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcC
Confidence            999999999765             334455555555554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.00011  Score=54.78  Aligned_cols=73  Identities=19%  Similarity=0.162  Sum_probs=54.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHc--cCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK--QVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~--~~d~v   77 (292)
                      +|+|+||+|.+|...++.+...|.+|++++++     ++|.+.+..+   +.+.+ .|..++   +.+.++..  ++|+|
T Consensus        31 ~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s-----~~k~~~~~~l---Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~v  101 (179)
T d1qora2          31 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKA---GAWQV-INYREEDLVERLKEITGGKKVRVV  101 (179)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTCCEEEE
T ss_pred             EEEEEccccccchHHHHHHHHhCCeEeecccc-----hHHHHHHHhc---CCeEE-EECCCCCHHHHHHHHhCCCCeEEE
Confidence            79999999999999999999999999999999     7777665554   43332 244443   34444443  58999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      +.+++..
T Consensus       102 ~d~~g~~  108 (179)
T d1qora2         102 YDSVGRD  108 (179)
T ss_dssp             EECSCGG
T ss_pred             EeCccHH
Confidence            9998843

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.39  E-value=0.00011  Score=54.30  Aligned_cols=75  Identities=20%  Similarity=0.170  Sum_probs=52.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      .+|+|+|+ |.+|...++.+...|.+|++++++     ++|.+..+.+   +.+.+.-...+.+.......++|.++.+.
T Consensus        29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~-----~~k~~~a~~l---Ga~~~i~~~~~~~~~~~~~~~~d~vi~~~   99 (168)
T d1piwa2          29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRS-----SRKREDAMKM---GADHYIATLEEGDWGEKYFDTFDLIVVCA   99 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHH---TCSEEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred             CEEEEECC-CCcchhHHHHhhhccccccccccc-----hhHHHHhhcc---CCcEEeeccchHHHHHhhhcccceEEEEe
Confidence            37999996 999999999888889999999998     6677655544   33322211123333444555789999987


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      +...
T Consensus       100 ~~~~  103 (168)
T d1piwa2         100 SSLT  103 (168)
T ss_dssp             SCST
T ss_pred             cCCc
Confidence            7543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.38  E-value=6.8e-05  Score=53.73  Aligned_cols=87  Identities=13%  Similarity=0.036  Sum_probs=58.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHh-h------hhcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIE-I------FKNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~------~~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      |||.|+|| |.+|+.++..|...|  .++..++++     +++.+... .      ......++...+  |.    +.++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~-----~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~   68 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVV-----EGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTA   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----SSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccc-----cccchhhhhhhhcccchhcccceEEecC--CH----HHhc
Confidence            78999996 999999999999987  589999988     44332111 1      112334444322  22    3467


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+|+.++|...             ....+.+++.+.+.+
T Consensus        69 dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~  109 (142)
T d1guza1          69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS  109 (142)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC
Confidence            9999999999765             444566666766665

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.38  E-value=8.6e-05  Score=54.98  Aligned_cols=70  Identities=23%  Similarity=0.216  Sum_probs=49.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcC--CcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNL--GVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|+|.| +|..++.++..|.+.+.+|+++.|+     .++.+.+......  ++..+..|-.       .+..+|+|||
T Consensus        19 k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~-----~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN   85 (171)
T d1p77a1          19 QHVLILG-AGGATKGVLLPLLQAQQNIVLANRT-----FSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVIN   85 (171)
T ss_dssp             CEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEE
T ss_pred             CEEEEEC-CcHHHHHHHHHHcccCceeeeccch-----HHHHHHHHHHHhhccccchhhhccc-------cccccceeee
Confidence            5799999 5788999999999888899999999     7776655444332  3334333321       2457899999


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      +.+..
T Consensus        86 ~tp~g   90 (171)
T d1p77a1          86 ATSAG   90 (171)
T ss_dssp             CCCC-
T ss_pred             ccccc
Confidence            97754

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.36  E-value=0.00048  Score=49.04  Aligned_cols=90  Identities=13%  Similarity=0.112  Sum_probs=54.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhhHhhh-h-cCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKLIEIF-K-NLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-~-~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      +||.|+|+ |.+|+.++-.|...+.  ++..++++.... ....-.+.+. . ........+|   .    +.++++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~-~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~adiv   72 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKA-IGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCDVI   72 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---C-CHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCcc-ceeeeeeccCcccCCCeeEeeCc---H----HHhCCCceE
Confidence            47999996 9999999999999873  799999884322 1111111111 0 1122322222   2    347789999


Q ss_pred             EEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           78 ISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        78 i~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +.++|...             ....+.+++.+.+++
T Consensus        73 vitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~  108 (142)
T d1y6ja1          73 VVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY  108 (142)
T ss_dssp             EECCCC------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEecccccCcCcchhHHhhHHHHHHHHHHHHhhccC
Confidence            99999765             445666667777665

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.35  E-value=0.0004  Score=45.85  Aligned_cols=84  Identities=17%  Similarity=0.217  Sum_probs=58.7

Q ss_pred             ceEEEEccCCcch-HHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIG-KKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|.+.|..| +| +.|++.|.++|++|.+.++..+.       ..+.+...++++..++-.  +    .+.++|.||..
T Consensus         9 ~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~-------~~~~L~~~Gi~v~~g~~~--~----~i~~~d~vV~S   74 (96)
T d1p3da1           9 QQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGV-------VTQRLAQAGAKIYIGHAE--E----HIEGASVVVVS   74 (96)
T ss_dssp             CEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSH-------HHHHHHHTTCEEEESCCG--G----GGTTCSEEEEC
T ss_pred             CEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCCh-------hhhHHHHCCCeEEECCcc--c----cCCCCCEEEEC
Confidence            6899999544 67 67899999999999999987421       224555678988877643  2    23578999988


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcc
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~  103 (292)
                      .+...   ...-+.+|++.| ++
T Consensus        75 ~AI~~---~npel~~A~~~g-ip   93 (96)
T d1p3da1          75 SAIKD---DNPELVTSKQKR-IP   93 (96)
T ss_dssp             TTSCT---TCHHHHHHHHTT-CC
T ss_pred             CCcCC---CCHHHHHHHHcC-CC
Confidence            77543   233355677777 54

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.35  E-value=0.0007  Score=48.05  Aligned_cols=86  Identities=20%  Similarity=0.201  Sum_probs=57.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhh--Hhh---h-hcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKL--IEI---F-KNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~--~~~---~-~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      |||.|+|| |.+|+.++-.|...+  .++..++++     +++.+.  ++.   . .........+|.       +.+++
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~-----~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~   67 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVD-----KKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKG   67 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecc-----cccccchhccccccccccccccccCCcH-------HHhcC
Confidence            79999996 999999999888877  478888887     443321  111   1 122344444332       34679


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+|+.++|...             ....+.+++.+.+.+
T Consensus        68 adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~  107 (140)
T d1a5za1          68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA  107 (140)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcC
Confidence            999999998765             444566666666665

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.34  E-value=5.4e-05  Score=56.65  Aligned_cols=103  Identities=17%  Similarity=0.093  Sum_probs=62.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh-hcCCc--EEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF-KNLGV--NVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~v--~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|.|.| +|..|..++..|.++|++|...+|...   ++..+.+... .++..  ..-..++.-.+++.++++++|+||
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~---~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii   76 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD---TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVL   76 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG---HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc---HHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhh
Confidence            8999999 699999999999999999999998521   2222222111 01111  110111222456778899999999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeeccCCC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFG  111 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g  111 (292)
                      .+...   .....+++.....-.-+.++..+-|
T Consensus        77 ~avps---~~~~~~~~~l~~~l~~~~ii~~tkg  106 (180)
T d1txga2          77 LGVST---DGVLPVMSRILPYLKDQYIVLISKG  106 (180)
T ss_dssp             ECSCG---GGHHHHHHHHTTTCCSCEEEECCCS
T ss_pred             cccch---hhhHHHHHhhccccccceecccccC
Confidence            97763   4555666665543212344444433

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.33  E-value=0.0011  Score=45.09  Aligned_cols=87  Identities=11%  Similarity=0.125  Sum_probs=63.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|+| .|.+|..-++.|++.|.+|++++...+   ++..   ......+++++..++.+.     .+.+++.|+.+.
T Consensus        13 k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~---~~~~---~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at   80 (113)
T d1pjqa1          13 RDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI---PQFT---VWANEGMLTLVEGPFDET-----LLDSCWLAIAAT   80 (113)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC---HHHH---HHHTTTSCEEEESSCCGG-----GGTTCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC---hHHH---HHHhcCCceeeccCCCHH-----HhCCCcEEeecC
Confidence            5899999 699999999999999999999977632   1111   222345788888887653     256788888665


Q ss_pred             cCCCchhHHHHHHHHHHhCCcc
Q 039623           82 SRGQIPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        82 ~~~~~~~~~~l~~a~~~~~~~~  103 (292)
                      +..  .....+.+.|++.+ +.
T Consensus        81 ~d~--~~n~~i~~~a~~~~-il   99 (113)
T d1pjqa1          81 DDD--TVNQRVSDAAESRR-IF   99 (113)
T ss_dssp             SCH--HHHHHHHHHHHHTT-CE
T ss_pred             CCH--HHHHHHHHHHHHcC-CE
Confidence            543  45568888898887 44

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.31  E-value=0.00058  Score=49.58  Aligned_cols=88  Identities=18%  Similarity=0.294  Sum_probs=71.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      .+|+|+| .|-.|.+-++.....|..|++++.+     .++.+.++......++....   +.+.+.+.++++|+||.++
T Consensus        33 a~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~-----~~~l~~l~~~~~~~~~~~~~---~~~~l~~~~~~aDivI~aa  103 (168)
T d1pjca1          33 GKVVILG-GGVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVELLYS---NSAEIETAVAEADLLIGAV  103 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEEEEC---CHHHHHHHHHTCSEEEECC
T ss_pred             cEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCc-----HHHHHHHHHhhcccceeehh---hhhhHHHhhccCcEEEEee
Confidence            3799999 6999999999999999999999998     78887777776666666544   5677889999999999998


Q ss_pred             cCCC----chhHHHHHHHHHH
Q 039623           82 SRGQ----IPEQAKIIAAVKE   98 (292)
Q Consensus        82 ~~~~----~~~~~~l~~a~~~   98 (292)
                      -.+.    ...++..++.+++
T Consensus       104 lipG~~aP~lIt~~mv~~Mk~  124 (168)
T d1pjca1         104 LVPGRRAPILVPASLVEQMRT  124 (168)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCT
T ss_pred             ecCCcccCeeecHHHHhhcCC
Confidence            7665    4456666666654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.31  E-value=3e-05  Score=57.26  Aligned_cols=70  Identities=16%  Similarity=0.210  Sum_probs=50.2

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH-----ccCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI-----KQVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~-----~~~d~v   77 (292)
                      +|||+||+|-+|...++.....|.+|++++++     ++|.+.+..+   +.+.+. |..  +...+..     +++|+|
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s-----~~k~~~~~~l---Gad~vi-~~~--~~~~~~~~~~~~~gvd~v   94 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGN-----REAADYLKQL---GASEVI-SRE--DVYDGTLKALSKQQWQGA   94 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESS-----SSTHHHHHHH---TCSEEE-EHH--HHCSSCCCSSCCCCEEEE
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecC-----HHHHHHHHhh---cccceE-ecc--chhchhhhcccCCCceEE
Confidence            59999999999999999999999999999998     7777666555   333321 211  1111111     258999


Q ss_pred             EEcCcC
Q 039623           78 ISTVSR   83 (292)
Q Consensus        78 i~~a~~   83 (292)
                      |.+.|-
T Consensus        95 id~vgg  100 (167)
T d1tt7a2          95 VDPVGG  100 (167)
T ss_dssp             EESCCT
T ss_pred             EecCcH
Confidence            999874

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.30  E-value=8.4e-05  Score=55.12  Aligned_cols=90  Identities=16%  Similarity=0.041  Sum_probs=54.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhC---CC----CEEEEecCCCCCCCcchhhHh----hhhcCCcE-EEECCCCCHHHHHHH
Q 039623            3 ATLIIGGTGYIGKKILEASVKA---GH----PTFALVRESTASDPVKGKLIE----IFKNLGVN-VLYGDLQDHESLIKA   70 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~---g~----~V~~~~r~~~~~~~~~~~~~~----~~~~~~v~-~v~~D~~d~~~~~~~   70 (292)
                      ||.|+||+|.||.+++-.|.+.   |.    .++.++....   .++.+.+.    +....... .+.++  +   ..+.
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~---~~~l~g~~mdl~d~a~~~~~~~~~~~--~---~~~~   97 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS---FQALEGVAMELEDSLYPLLREVSIGI--D---PYEV   97 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEEEES--C---HHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc---cchhcchhhhhcccccccccCccccc--c---chhh
Confidence            6999999999999999998875   32    3344444311   12222111    11111222 22222  2   3467


Q ss_pred             HccCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           71 IKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++++|+||.++|...             ....+.+.+++.++.
T Consensus        98 ~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a  140 (175)
T d7mdha1          98 FEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVA  140 (175)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            899999999999876             445666777777753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=5.3e-05  Score=56.47  Aligned_cols=71  Identities=14%  Similarity=0.229  Sum_probs=50.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~~   80 (292)
                      +|||+||+|.+|...++.....|.+|++++|+     ++|.+.++.+   +.+.+. |..+.+. .+.+.  ..|.++++
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~-----~~k~~~~~~l---Gad~vi-~~~~~~~-~~~l~~~~~~~vvD~  103 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKSL---GASRVL-PRDEFAE-SRPLEKQVWAGAIDT  103 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHHH---TEEEEE-EGGGSSS-CCSSCCCCEEEEEES
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecc-----hhHHHHHHhh---cccccc-ccccHHH-HHHHHhhcCCeeEEE
Confidence            69999999999999999999999999999998     7777655544   443332 2222221 12222  36889988


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      ++.
T Consensus       104 Vgg  106 (177)
T d1o89a2         104 VGD  106 (177)
T ss_dssp             SCH
T ss_pred             cch
Confidence            873

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.29  E-value=6.8e-05  Score=54.39  Aligned_cols=67  Identities=18%  Similarity=0.174  Sum_probs=47.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |||.|+| .|.+|+.+++.|+++||+|++.+|.+     .+.....   ..++.+. .+      ..++++++|+||.+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~-----~~~~~~~---~~~~~~~-~~------~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGR-----SPSTIER---ARTVGVT-ET------SEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTC-----CHHHHHH---HHHHTCE-EC------CHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCch-----hHHHHHh---hhccccc-cc------HHHHHhhcCeEEEEe
Confidence            7899998 79999999999999999999888773     2222111   1122221 11      335678899999998


Q ss_pred             cCC
Q 039623           82 SRG   84 (292)
Q Consensus        82 ~~~   84 (292)
                      ...
T Consensus        65 ~~~   67 (152)
T d1i36a2          65 TPG   67 (152)
T ss_dssp             CGG
T ss_pred             cCc
Confidence            754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.23  E-value=0.00033  Score=52.22  Aligned_cols=85  Identities=15%  Similarity=0.198  Sum_probs=55.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECCCCCHHHH----HHHHc--cC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQDHESL----IKAIK--QV   74 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d~~~~----~~~~~--~~   74 (292)
                      +|||+|| |-+|...++.+...|. +|++++++     +++.+..+++   +.+ ++...-.+..+.    .++..  ++
T Consensus        31 ~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~-----~~~~~~a~~l---Ga~~vi~~~~~~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          31 TVVIQGA-GPLGLFGVVIARSLGAENVIVIAGS-----PNRLKLAEEI---GADLTLNRRETSVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBSEEEEEESC-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             EEEEECC-Cccchhheecccccccccccccccc-----cccccccccc---cceEEEeccccchHHHHHHHHHhhCCCCc
Confidence            7999996 8999999999999996 79999998     7777665544   332 332222233222    22222  58


Q ss_pred             CEEEEcCcCCCchhHHHHHHHHHH
Q 039623           75 DVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        75 d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      |+||.++|...  .....++.++.
T Consensus       102 Dvvid~vG~~~--~~~~a~~~l~~  123 (182)
T d1vj0a2         102 DFILEATGDSR--ALLEGSELLRR  123 (182)
T ss_dssp             EEEEECSSCTT--HHHHHHHHEEE
T ss_pred             eEEeecCCchh--HHHHHHHHhcC
Confidence            99999998643  23344444443

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.22  E-value=0.00013  Score=54.67  Aligned_cols=32  Identities=16%  Similarity=0.337  Sum_probs=27.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEec
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVR   33 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r   33 (292)
                      .||.|+||||+.|+.|++.|.++. +++..+..
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            479999999999999999999885 57766653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.20  E-value=0.00098  Score=47.37  Aligned_cols=86  Identities=10%  Similarity=0.041  Sum_probs=55.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhh----Hhhh---hcCCcEEEEC-CCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKL----IEIF---KNLGVNVLYG-DLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~----~~~~---~~~~v~~v~~-D~~d~~~~~~~~   71 (292)
                      |||.|+|+ |.+|++++-.|..+|  .++..++++     +++.+.    +++.   ......+... |+       +.+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~-----~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~   67 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLL   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecc-----cchhhHHHHHHhhhccccCCCCccccCCCH-------HHh
Confidence            79999996 999999999888887  468888887     444321    1111   1222333332 32       257


Q ss_pred             ccCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           72 KQVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        72 ~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +++|+|+.++|...             ....+.+.+.+.+.+
T Consensus        68 ~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~  109 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA  109 (142)
T ss_dssp             TTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             ccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhC
Confidence            79999999999765             334445555555554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.17  E-value=0.0011  Score=47.28  Aligned_cols=70  Identities=24%  Similarity=0.263  Sum_probs=47.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhh----Hhh-h--hcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKL----IEI-F--KNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~----~~~-~--~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||.|+|+ |++|+.++-.|+.+|  .++..++++     +++.+.    +++ .  .........+|.       +.++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~-----~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~   68 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDAN-----EAKVKADQIDFQDAMANLEAHGNIVINDW-------AALA   68 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGT
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecc-----cchhhhHHHhhhccccccCCccceeccCH-------HHhc
Confidence            78999994 999999999999887  478888877     444311    111 1  122344444443       2367


Q ss_pred             cCCEEEEcCcCC
Q 039623           73 QVDVVISTVSRG   84 (292)
Q Consensus        73 ~~d~vi~~a~~~   84 (292)
                      ++|+||.++|..
T Consensus        69 ~adiVVitaG~~   80 (146)
T d1hyha1          69 DADVVISTLGNI   80 (146)
T ss_dssp             TCSEEEECCSCG
T ss_pred             cccEEEEecccc
Confidence            899999999964

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.17  E-value=0.0011  Score=48.65  Aligned_cols=65  Identities=20%  Similarity=0.341  Sum_probs=46.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      ++|+|+| +|..|++++..|.+.|. +|+++.|+     .++.+.+....  +...+. +..        ...+|+|||+
T Consensus        18 ~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~-----~~ka~~L~~~~--~~~~~~-~~~--------~~~~DliINa   80 (167)
T d1npya1          18 AKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARN-----VKTGQYLAALY--GYAYIN-SLE--------NQQADILVNV   80 (167)
T ss_dssp             SCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSC-----HHHHHHHHHHH--TCEEES-CCT--------TCCCSEEEEC
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeccc-----HHHHHHHHHhh--hhhhhh-ccc--------ccchhhheec
Confidence            5799999 58899999999999995 79999998     77766554432  223221 111        1367999998


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      .+.
T Consensus        81 Tpi   83 (167)
T d1npya1          81 TSI   83 (167)
T ss_dssp             SST
T ss_pred             ccc
Confidence            654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.17  E-value=0.00073  Score=48.81  Aligned_cols=25  Identities=20%  Similarity=0.522  Sum_probs=22.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHP   27 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~   27 (292)
                      ||.|+||||++|+.|++.|.++.+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp   27 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLP   27 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCC
Confidence            7999999999999999999888653

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.10  E-value=0.0016  Score=48.30  Aligned_cols=34  Identities=18%  Similarity=0.309  Sum_probs=31.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|.|.| .|.||+.+++.|..-|.+|.+.+|...
T Consensus        43 k~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          43 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ceEEEec-cccccccceeeeecccccccccccccc
Confidence            5799999 799999999999999999999998754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.08  E-value=0.00032  Score=50.64  Aligned_cols=65  Identities=25%  Similarity=0.338  Sum_probs=47.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |||.+.| +|.+|+++++.|++.| ++|.+.+|+     +++.+.+...  .++... .|..+       +.++|+||.+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~-----~~~~~~l~~~--~~~~~~-~~~~~-------v~~~Div~la   64 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRG-----AEKRERLEKE--LGVETS-ATLPE-------LHSDDVLILA   64 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSS-----HHHHHHHHHH--TCCEEE-SSCCC-------CCTTSEEEEC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCC-----hhHHHHhhhh--cccccc-ccccc-------ccccceEEEe
Confidence            7899999 5999999999999887 999999998     6666554432  245432 23221       4568999987


Q ss_pred             Cc
Q 039623           81 VS   82 (292)
Q Consensus        81 a~   82 (292)
                      ..
T Consensus        65 vk   66 (152)
T d1yqga2          65 VK   66 (152)
T ss_dssp             SC
T ss_pred             cC
Confidence            65

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.08  E-value=7.3e-05  Score=54.37  Aligned_cols=91  Identities=15%  Similarity=-0.027  Sum_probs=53.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-C------CEEEEecCCCCCCCcchhhHhh----hhcCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-H------PTFALVRESTASDPVKGKLIEI----FKNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~------~V~~~~r~~~~~~~~~~~~~~~----~~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      |||.|+||+|.+|++++-.|.+.+ +      +...++.+..   .++.+.+..    ........+..-- +   ..+.
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~-~---~~~~   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM---MGVLDGVLMELQDCALPLLKDVIATD-K---EEIA   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTCCTTEEEEEEES-C---HHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc---hhhhhhhhhhhcccccccccccccCc-c---cccc
Confidence            689999999999999999988754 1      2333333311   233322221    1111222222211 1   3367


Q ss_pred             HccCCEEEEcCcCCC-------------chhHHHHHHHHHHh
Q 039623           71 IKQVDVVISTVSRGQ-------------IPEQAKIIAAVKEA   99 (292)
Q Consensus        71 ~~~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~   99 (292)
                      ++++|+||.++|...             ....+.+.+.+.++
T Consensus        77 ~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          77 FKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             TTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence            889999999999866             34455666666554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=5e-05  Score=57.43  Aligned_cols=90  Identities=11%  Similarity=0.224  Sum_probs=56.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh--------hhcCCcE-----------EEECCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI--------FKNLGVN-----------VLYGDLQ   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~v~-----------~v~~D~~   62 (292)
                      +||.|.|| |.+|+.++..+..+|++|++++++     ++..+....        +...+..           -...-+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~-----~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~   78 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQT-----EDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA   78 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECC-----hHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcc
Confidence            68999995 999999999999999999999998     443221111        1111100           0000011


Q ss_pred             CHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHH
Q 039623           63 DHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      -..++.++++++|.|+-++.-. ...-+.++....+
T Consensus        79 ~~~d~~~a~~~ad~ViEav~E~-l~~K~~v~~~l~~  113 (192)
T d1f0ya2          79 TSTDAASVVHSTDLVVEAIVEN-LKVKNELFKRLDK  113 (192)
T ss_dssp             EESCHHHHTTSCSEEEECCCSC-HHHHHHHHHHHTT
T ss_pred             ccchhHhhhcccceehhhcccc-hhHHHHHHHHHhh
Confidence            1122456778899999988755 4555556655544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.04  E-value=0.00059  Score=49.29  Aligned_cols=88  Identities=16%  Similarity=0.008  Sum_probs=56.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH-hhh------hcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI-EIF------KNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~------~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      +||.|+|+ |.+|+.++-.|...+ .++.+++.+     +++.+.. .++      ..........+  +   ..+.+++
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~-----~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~---~~~~~~~   76 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVV-----KGMPEGKALDLSHVTSVVDTNVSVRAEY--S---YEAALTG   76 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSS-----SSHHHHHHHHHHHHHHHTTCCCCEEEEC--S---HHHHHTT
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEec-----cccchhHHHHHhhhccccCCeeEEeccC--c---hhhhhcC
Confidence            57999996 999999998888877 478888877     4433211 111      11122222111  2   3456789


Q ss_pred             CCEEEEcCcCCC------------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ------------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~------------------~~~~~~l~~a~~~~~  100 (292)
                      +|+|+.++|...                  ....+.+++.+.+.+
T Consensus        77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~  121 (154)
T d1pzga1          77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC  121 (154)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC
Confidence            999999998643                  345666777777776

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.04  E-value=0.00041  Score=51.97  Aligned_cols=73  Identities=19%  Similarity=0.221  Sum_probs=45.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEE-EecCCCCCCCcchhhHhhhhcCCcE-EEECCCCCH-HHHHHHHc-cCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFA-LVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQDH-ESLIKAIK-QVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d~-~~~~~~~~-~~d~vi   78 (292)
                      +|||+||+|-+|+..++.+...|.++++ .+++     +++...+..  ..+.+ ++...-.+. +.+.++.. ++|+||
T Consensus        33 tVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~-----~e~~~~l~~--~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~  105 (187)
T d1vj1a2          33 TMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT-----QEKCLFLTS--ELGFDAAVNYKTGNVAEQLREACPGGVDVYF  105 (187)
T ss_dssp             EEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS-----HHHHHHHHH--HSCCSEEEETTSSCHHHHHHHHCTTCEEEEE
T ss_pred             EEEEECCCchhhHHHHHHHHHcCCcceecccch-----HHHHhhhhh--cccceEEeeccchhHHHHHHHHhccCceEEE
Confidence            5999999999999999999889976554 4554     444432222  22322 222222232 33333333 699999


Q ss_pred             EcCc
Q 039623           79 STVS   82 (292)
Q Consensus        79 ~~a~   82 (292)
                      .+.|
T Consensus       106 D~vG  109 (187)
T d1vj1a2         106 DNVG  109 (187)
T ss_dssp             ESSC
T ss_pred             ecCC
Confidence            9998

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.97  E-value=0.00062  Score=50.30  Aligned_cols=84  Identities=17%  Similarity=0.281  Sum_probs=55.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCC---HHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQD---HESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d---~~~~~~~~~--~~d~   76 (292)
                      +|+|.|+ |-+|...++.+...|. +|++++++     ++|.+..+.+   +...+ .|..+   .+.+.++..  ++|+
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~-----~~r~~~a~~l---Ga~~~-i~~~~~~~~~~v~~~t~g~G~D~   99 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR-----PICVEAAKFY---GATDI-LNYKNGHIEDQVMKLTNGKGVDR   99 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC-----HHHHHHHHHH---TCSEE-ECGGGSCHHHHHHHHTTTSCEEE
T ss_pred             EEEEEcC-Ccchhhhhhhhhcccccccccccch-----hhhHHHHHhh---Ccccc-ccccchhHHHHHHHHhhccCcce
Confidence            6999985 9999999999998996 79999988     7776655544   33221 23333   344445543  5999


Q ss_pred             EEEcCcCCCchhHHHHHHHHHH
Q 039623           77 VISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        77 vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      ||.++|...  .....++.+++
T Consensus       100 vid~~g~~~--~~~~a~~~~~~  119 (174)
T d1jqba2         100 VIMAGGGSE--TLSQAVKMVKP  119 (174)
T ss_dssp             EEECSSCTT--HHHHHHHHEEE
T ss_pred             EEEccCCHH--HHHHHHHHHhc
Confidence            999999653  22334455443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.95  E-value=0.00074  Score=49.55  Aligned_cols=74  Identities=16%  Similarity=0.225  Sum_probs=51.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCH-HHHHHHHc--cCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDH-ESLIKAIK--QVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~-~~~~~~~~--~~d~v   77 (292)
                      +|+|+|++|-+|...++.+...| .+|++.+++     ++|.+..+.+   +. .++..+-.|. +.+.+...  ++|++
T Consensus        30 ~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~-----~~~~~~~~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~~d~v  101 (170)
T d1jvba2          30 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRA---GADYVINASMQDPLAEIRRITESKGVDAV  101 (170)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHH---TCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             EEEEEeccccceeeeeecccccccccccccccc-----hhhHHHHHHc---CCceeeccCCcCHHHHHHHHhhcccchhh
Confidence            69999999999999999999888 588888888     6676555543   33 3343333332 33333332  58999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      |.++|..
T Consensus       102 id~~g~~  108 (170)
T d1jvba2         102 IDLNNSE  108 (170)
T ss_dssp             EESCCCH
T ss_pred             hcccccc
Confidence            9998854

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.95  E-value=0.0032  Score=44.59  Aligned_cols=87  Identities=16%  Similarity=0.153  Sum_probs=57.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh----Hhhh--hcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL----IEIF--KNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~--~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      .||.|+|+ |.+|++++-.|..+|.  ++..++++     +++.+.    +++.  ......+...+  +.    +.+++
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~-----~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~d   69 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIA-----KERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRD   69 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----HHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec-----cccchhHHHHHHhccccCCCceeecCC--CH----HHhhC
Confidence            58999996 9999999999999883  78888887     444321    1111  11223333332  22    24678


Q ss_pred             CCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      +|+|+.++|...             ....+.+++.+.+.+
T Consensus        70 aDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~  109 (143)
T d1llda1          70 ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA  109 (143)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhC
Confidence            999999999866             344555666666665

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.93  E-value=0.0028  Score=40.84  Aligned_cols=84  Identities=18%  Similarity=0.248  Sum_probs=59.0

Q ss_pred             ceEEEEccCCcchH-HHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEc
Q 039623            2 AATLIIGGTGYIGK-KILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~   80 (292)
                      |||-++|..| +|. .|++.|.++|+.|.+.++..+       +..+.|...++++..+.  +++.    +.++|.||..
T Consensus         2 ~~ihfiGIgG-~GMs~LA~~L~~~G~~VsGSD~~~~-------~~t~~L~~~Gi~i~~gh--~~~~----i~~~d~vV~S   67 (89)
T d1j6ua1           2 MKIHFVGIGG-IGMSAVALHEFSNGNDVYGSNIEET-------ERTAYLRKLGIPIFVPH--SADN----WYDPDLVIKT   67 (89)
T ss_dssp             CEEEEETTTS-HHHHHHHHHHHHTTCEEEEECSSCC-------HHHHHHHHTTCCEESSC--CTTS----CCCCSEEEEC
T ss_pred             cEEEEEeECH-HHHHHHHHHHHhCCCeEEEEeCCCC-------hhHHHHHHCCCeEEeee--cccc----cCCCCEEEEe
Confidence            6888999655 665 788999999999999998732       22345667788887763  2222    3578999988


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcc
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~  103 (292)
                      .+...   .--.+++|++.+ ++
T Consensus        68 sAI~~---~npel~~A~~~g-Ip   86 (89)
T d1j6ua1          68 PAVRD---DNPEIVRARMER-VP   86 (89)
T ss_dssp             TTCCT---TCHHHHHHHHTT-CC
T ss_pred             cCcCC---CCHHHHHHHHcC-CC
Confidence            77543   334467777777 54

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.0023  Score=46.91  Aligned_cols=85  Identities=16%  Similarity=0.185  Sum_probs=57.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcE-EEECCCCCHHHHHHHHc-----cCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVN-VLYGDLQDHESLIKAIK-----QVD   75 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~d~~~~~~~~~-----~~d   75 (292)
                      +|+|.|+ |-+|...++.+...|. +|++.+++     ++|.+..+++   +.+ ++..+-.+.....+.++     ++|
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~-----~~rl~~a~~~---Ga~~~~~~~~~~~~~~~~~~~~~~g~g~D   99 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS-----ATRLSKAKEI---GADLVLQISKESPQEIARKVEGQLGCKPE   99 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHT---TCSEEEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCC-----HHHHHHHHHh---CCcccccccccccccccccccccCCCCce
Confidence            6999985 9999999999999997 69999988     7777655443   433 33334445555544443     689


Q ss_pred             EEEEcCcCCCchhHHHHHHHHHH
Q 039623           76 VVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      +||.+.|..  ......++.++.
T Consensus       100 vvid~~G~~--~~~~~a~~~~~~  120 (171)
T d1pl8a2         100 VTIECTGAE--ASIQAGIYATRS  120 (171)
T ss_dssp             EEEECSCCH--HHHHHHHHHSCT
T ss_pred             EEEeccCCc--hhHHHHHHHhcC
Confidence            999999854  233344444443

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.89  E-value=0.0025  Score=45.22  Aligned_cols=71  Identities=15%  Similarity=0.114  Sum_probs=46.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhH-hhh------hcCCcEEE-ECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLI-EIF------KNLGVNVL-YGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~------~~~~v~~v-~~D~~d~~~~~~~~~   72 (292)
                      +||.|+|+ |.+|..++-.|...+ .++..++.+     +++.+.. .++      ......+. ..|..       .++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~-----~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-------~~~   68 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIV-----EGVPQGKALDLYEASPIEGFDVRVTGTNNYA-------DTA   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSS-----SSHHHHHHHHHHTTHHHHTCCCCEEEESCGG-------GGT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeec-----cccchhHHHHhhccccccCCCCEEEecCcHH-------Hhc
Confidence            58999995 999999999888877 488888887     3332111 111      12233333 23432       356


Q ss_pred             cCCEEEEcCcCCC
Q 039623           73 QVDVVISTVSRGQ   85 (292)
Q Consensus        73 ~~d~vi~~a~~~~   85 (292)
                      ++|+|+.+||...
T Consensus        69 ~advvvitag~~~   81 (142)
T d1uxja1          69 NSDVIVVTSGAPR   81 (142)
T ss_dssp             TCSEEEECCSCC-
T ss_pred             CCCEEEEeeeccC
Confidence            8999999999765

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.89  E-value=0.0043  Score=45.41  Aligned_cols=98  Identities=21%  Similarity=0.273  Sum_probs=61.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHH-----------HHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHE-----------SLI   68 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~-----------~~~   68 (292)
                      ++||.|-| .|-||+.+++.+.++. .++.++.-...   .+..   ..+...++..+..+.....           .+.
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~---~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKP---DFEA---YRAKELGIPVYAASEEFIPRFEKEGFEVAGTLN   74 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSC---SHHH---HHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCC---hHHH---HHhhhcCceeecccccceeeecccCccccchhh
Confidence            16899999 6999999999998765 67776654211   1111   2222334455554433222           234


Q ss_pred             HHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           69 KAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        69 ~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      .++.++|+||-|.|.+.   +..-++.-.++| +++++.|.
T Consensus        75 ~~~~~vDvViEcTG~f~---~~~~~~~hl~~G-~k~Vi~s~  111 (172)
T d2czca2          75 DLLEKVDIIVDATPGGI---GAKNKPLYEKAG-VKAIFQGG  111 (172)
T ss_dssp             HHHTTCSEEEECCSTTH---HHHHHHHHHHHT-CEEEECTT
T ss_pred             hhhccCCEEEECCCCCC---CHHHHHHHHHcC-CCEEEECC
Confidence            44568999999999764   333345556678 88888654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00049  Score=50.16  Aligned_cols=98  Identities=20%  Similarity=0.209  Sum_probs=58.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEE-EecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFA-LVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      +||+|.|++|.+|+.+++.+.+. +.++.+ ++|..+.........+......++.+ ..|      +..+++.+|+||.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~-~~~------~~~~~~~~DViID   77 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV-QSS------LDAVKDDFDVFID   77 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE-ESC------STTTTTSCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCcee-ecc------HHHHhcccceEEE
Confidence            68999999999999999999886 566654 44543321100110000011111222 222      2345678999998


Q ss_pred             cCcCCCchhHHHHHHHHHHhCCcceeeccCCC
Q 039623           80 TVSRGQIPEQAKIIAAVKEAGNVKRFLPSEFG  111 (292)
Q Consensus        80 ~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~~g  111 (292)
                      +.-   -..+...++.|.+++ ++. |..+.|
T Consensus        78 Fs~---p~~~~~~~~~a~~~~-~~~-ViGTTG  104 (162)
T d1diha1          78 FTR---PEGTLNHLAFCRQHG-KGM-VIGTTG  104 (162)
T ss_dssp             CSC---HHHHHHHHHHHHHTT-CEE-EECCCC
T ss_pred             ecc---HHHHHHHHHHHHhcc-cee-EEecCC
Confidence            654   467788889999988 444 443433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.87  E-value=0.0032  Score=45.44  Aligned_cols=86  Identities=15%  Similarity=0.080  Sum_probs=56.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchh--h--Hhh---hhcCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGK--L--IEI---FKNLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~--~--~~~---~~~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||.|+|+ |.+|+.++-.|...|.  ++..++++     +++.+  .  +..   +.......-.+|+       +.++
T Consensus        21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~-----~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~   87 (160)
T d1i0za1          21 NKITVVGV-GQVGMACAISILGKSLADELALVDVL-----EDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTA   87 (160)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec-----cchhHHHHHHHhccccccCCCeEEeccch-------hhcc
Confidence            48999995 9999999999999984  68888887     44331  1  111   1111222222232       2367


Q ss_pred             cCCEEEEcCcCCC-------------chhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQ-------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~-------------~~~~~~l~~a~~~~~  100 (292)
                      ++|+|+.+||...             ....+.+++.+.+.+
T Consensus        88 ~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~  128 (160)
T d1i0za1          88 NSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS  128 (160)
T ss_dssp             TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             cccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcC
Confidence            8999999999865             345556666666665

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.75  E-value=0.001  Score=50.08  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=29.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|.|.| .|.||+.+++.|..-|.+|.+.++..
T Consensus        44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CeEEEec-ccccchhHHHhHhhhcccccccCccc
Confidence            5799999 89999999999999999999998763

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.64  E-value=0.0027  Score=46.48  Aligned_cols=33  Identities=18%  Similarity=0.349  Sum_probs=26.2

Q ss_pred             Cc--eEEEEccCCcchHHHHHHHHhC-CCCEEEEecC
Q 039623            1 MA--ATLIIGGTGYIGKKILEASVKA-GHPTFALVRE   34 (292)
Q Consensus         1 m~--~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~   34 (292)
                      |+  ||.|.| +|.+|+..++.|.+. ++++.++...
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~   36 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSR   36 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEec
Confidence            64  589999 799999999999886 5777766543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.64  E-value=0.0024  Score=46.44  Aligned_cols=72  Identities=19%  Similarity=0.171  Sum_probs=48.2

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCC-HHHHHHHHccCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQD-HESLIKAIKQVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d-~~~~~~~~~~~d~vi~~   80 (292)
                      +|+|.|+ |-+|...++.+...|.+|++++++     ++|.+..+++   +. .++..+-.| .+.+.+...+.+.++.+
T Consensus        30 ~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~-----~~~~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~~  100 (166)
T d1llua2          30 WVAISGI-GGLGHVAVQYARAMGLHVAAIDID-----DAKLELARKL---GASLTVNARQEDPVEAIQRDIGGAHGVLVT  100 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred             EEEEeec-cccHHHHHHHHHHcCCccceecch-----hhHHHhhhcc---CccccccccchhHHHHHHHhhcCCcccccc
Confidence            6999985 999999999998899999999998     7776555443   33 233232222 23344444466666666


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      ++.
T Consensus       101 ~~~  103 (166)
T d1llua2         101 AVS  103 (166)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.55  E-value=6.3e-05  Score=56.11  Aligned_cols=70  Identities=17%  Similarity=0.193  Sum_probs=44.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhc----CC-c-EEEECCCCCHHHHHHHHccCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKN----LG-V-NVLYGDLQDHESLIKAIKQVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~-v-~~v~~D~~d~~~~~~~~~~~d   75 (292)
                      ++|+|+| +|..++.++..|.+.| +|+++.|+     +++.+.+.....    .. . .+-..|+.      ..+.++|
T Consensus        19 k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~-----~~ka~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d   85 (177)
T d1nvta1          19 KNIVIYG-AGGAARAVAFELAKDN-NIIIANRT-----VEKAEALAKEIAEKLNKKFGEEVKFSGLD------VDLDGVD   85 (177)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSS-----HHHHHHHHHHHHHHHTCCHHHHEEEECTT------CCCTTCC
T ss_pred             CEEEEEC-CcHHHHHHHHHHcccc-ceeeehhh-----hhHHHHHHHHHHHhhchhhhhhhhhhhhh------hccchhh
Confidence            5799999 5889999999997766 89999998     777654432111    11 1 11112221      2344679


Q ss_pred             EEEEcCcCC
Q 039623           76 VVISTVSRG   84 (292)
Q Consensus        76 ~vi~~a~~~   84 (292)
                      .+|++.+..
T Consensus        86 liIn~tp~g   94 (177)
T d1nvta1          86 IIINATPIG   94 (177)
T ss_dssp             EEEECSCTT
T ss_pred             hhccCCccc
Confidence            999987653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.003  Score=47.10  Aligned_cols=34  Identities=24%  Similarity=0.195  Sum_probs=30.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|.|.| .|.||+.+++.|..-|.+|.+.++...
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          45 KKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             eEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence            4799998 899999999999999999999998643

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.55  E-value=0.011  Score=41.98  Aligned_cols=87  Identities=16%  Similarity=0.092  Sum_probs=56.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhh----Hhh---hhcCCcEEEECCCCCHHHHHHHHcc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKL----IEI---FKNLGVNVLYGDLQDHESLIKAIKQ   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~----~~~---~~~~~v~~v~~D~~d~~~~~~~~~~   73 (292)
                      +||.|+|+ |.+|+.++-.|...+ .++..++++     +++.+.    +..   +...+..+...+  +.    +.+++
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~-----~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~   71 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIV-----KNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAG   71 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSS-----SSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEecc-----CCcceeeecchhhhccccCCCcEEEecc--cc----cccCC
Confidence            48999995 999999998888777 578888887     433211    111   122333444332  22    34678


Q ss_pred             CCEEEEcCcCCC------------------chhHHHHHHHHHHhC
Q 039623           74 VDVVISTVSRGQ------------------IPEQAKIIAAVKEAG  100 (292)
Q Consensus        74 ~d~vi~~a~~~~------------------~~~~~~l~~a~~~~~  100 (292)
                      +|+|+.++|...                  ....+.+.+.+++.+
T Consensus        72 advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~  116 (150)
T d1t2da1          72 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC  116 (150)
T ss_dssp             CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred             CcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999653                  334566666666665

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.52  E-value=0.0071  Score=42.22  Aligned_cols=29  Identities=21%  Similarity=0.277  Sum_probs=24.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhC-CCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKA-GHPTFAL   31 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~   31 (292)
                      ||.|.|++|.+|+.+++.+.+. ++++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            7999999999999999988775 5776544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.52  E-value=0.0037  Score=47.02  Aligned_cols=34  Identities=21%  Similarity=0.213  Sum_probs=30.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|.|.| .|.||+.+++.|..-|.+|.+.++...
T Consensus        46 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          46 QTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             eeeeeee-cccccccccccccccceeeeccCCccc
Confidence            5799999 799999999999999999999998744

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.45  E-value=0.003  Score=45.02  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=30.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKA--GHPTFALVRES   35 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~   35 (292)
                      |++|.|+|+||-||....+-+.+.  .++|.+++-+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            688999999999999999998876  48999887663

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.42  E-value=0.0028  Score=46.55  Aligned_cols=73  Identities=18%  Similarity=0.245  Sum_probs=48.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEE-EEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCH-HHHHHHHc-cCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTF-ALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDH-ESLIKAIK-QVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~-~~~~~~~~-~~d~vi   78 (292)
                      +|+|.|+ |.+|...++.+...|.+++ +.+++     ++|.+..+++   +. +++..+-.|. +.+.++.. ++|+||
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~-----~~k~~~a~~~---Ga~~~i~~~~~~~~~~i~~~t~gg~D~vi  101 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV-----ESRLELAKQL---GATHVINSKTQDPVAAIKEITDGGVNFAL  101 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC-----HHHHHHHHHH---TCSEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccH-----HHHHHHHHHc---CCeEEEeCCCcCHHHHHHHHcCCCCcEEE
Confidence            6999996 9999999999988897654 55665     6666655554   33 3443332332 33333433 599999


Q ss_pred             EcCcCC
Q 039623           79 STVSRG   84 (292)
Q Consensus        79 ~~a~~~   84 (292)
                      .|.|..
T Consensus       102 d~~G~~  107 (174)
T d1f8fa2         102 ESTGSP  107 (174)
T ss_dssp             ECSCCH
T ss_pred             EcCCcH
Confidence            998854

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.42  E-value=0.0015  Score=48.97  Aligned_cols=34  Identities=18%  Similarity=0.171  Sum_probs=30.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|.|.| .|.||+.+++.|..-|.+|.+.++...
T Consensus        50 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          50 ETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            5799999 799999999999999999999988743

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=96.41  E-value=0.019  Score=41.74  Aligned_cols=97  Identities=20%  Similarity=0.311  Sum_probs=58.2

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH-----------HHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH-----------ESLI   68 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~-----------~~~~   68 (292)
                      |++|.|-| -|.||+.+++.|..++ .+|.++.-...   ....   ..+...+.......-...           ..+.
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~---~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~   73 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRP---DFEA---RMALKKGYDLYVAIPERVKLFEKAGIEVAGTVD   73 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSC---SHHH---HHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCc---HHHH---HHHHhcCCceEecccccceeecccCcccCCChh
Confidence            89999999 7999999999998876 67776654321   1111   111122333333321111           1234


Q ss_pred             HHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           69 KAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        69 ~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      .++.++|+||-|.|.+.   ++.-++.-.++| ++.++.+
T Consensus        74 ~~~~~vDvViEcTG~f~---~~~~~~~hl~~G-~K~vi~~  109 (171)
T d1cf2o1          74 DMLDEADIVIDCTPEGI---GAKNLKMYKEKG-IKAIFQG  109 (171)
T ss_dssp             HHHHTCSEEEECCSTTH---HHHHHHHHHHTT-CEEEECT
T ss_pred             HhhcCCCEEEEccCCCC---CHHHHHHHHHcC-CCEEEEC
Confidence            55678999999999864   222344445678 7766653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.36  E-value=0.0032  Score=46.25  Aligned_cols=73  Identities=15%  Similarity=0.191  Sum_probs=49.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC--CCCC-HHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG--DLQD-HESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~--D~~d-~~~~~~~~~--~~d~   76 (292)
                      +|+|.|+ |.+|...+..+...| .+|++++++     ++|.+....+   +.....-  +-.+ .+...+...  ++|+
T Consensus        31 tVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~-----~~k~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~  101 (176)
T d2jhfa2          31 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDIN-----KDKFAKAKEV---GATECVNPQDYKKPIQEVLTEMSNGGVDF  101 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             EEEEECC-CCcHHHHHHHHHHcCCceEEeecCc-----HHHHHHHHHh---CCeeEEecCCchhHHHHHHHHHhcCCCCE
Confidence            6999998 569999999999998 588888888     7777554443   3333222  2222 233333333  6999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      +|.+.|..
T Consensus       102 vid~~G~~  109 (176)
T d2jhfa2         102 SFEVIGRL  109 (176)
T ss_dssp             EEECSCCH
T ss_pred             EEecCCch
Confidence            99998865

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.0041  Score=44.86  Aligned_cols=71  Identities=14%  Similarity=0.045  Sum_probs=47.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCCCCCCCcchhh-Hhhhh------cCCcEEEECCCCCHHHHHHHHc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRESTASDPVKGKL-IEIFK------NLGVNVLYGDLQDHESLIKAIK   72 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~~~------~~~v~~v~~D~~d~~~~~~~~~   72 (292)
                      +||.|+|+ |.+|.+++-.|...|.  ++..++++     +++.+. ..++.      .........|.       +.++
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~-----~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~   86 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLADELALVDAD-----TDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSA   86 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSC-----HHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCC-----chhhhccHHHHhCcchhcCCCeEEeccch-------hhhc
Confidence            47999995 9999999999999884  68888887     444321 11221      11222223332       2457


Q ss_pred             cCCEEEEcCcCCC
Q 039623           73 QVDVVISTVSRGQ   85 (292)
Q Consensus        73 ~~d~vi~~a~~~~   85 (292)
                      ++|+|+.++|...
T Consensus        87 ~adivvitag~~~   99 (159)
T d2ldxa1          87 NSKLVIITAGARM   99 (159)
T ss_dssp             TEEEEEECCSCCC
T ss_pred             cccEEEEeccccc
Confidence            8999999999765

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0018  Score=40.56  Aligned_cols=34  Identities=18%  Similarity=0.402  Sum_probs=31.4

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ||+|.|+| +|.+|+-++..-.+-|+++++++-+.
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            89999999 79999999999999999999998764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.28  E-value=0.0014  Score=48.80  Aligned_cols=93  Identities=14%  Similarity=0.117  Sum_probs=55.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCc-EEEECCCCCHHHHHH----------
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGV-NVLYGDLQDHESLIK----------   69 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~d~~~~~~----------   69 (292)
                      ++||.|.|| |.+|+.++..++.+|++|++++++     ++..+.........+ ..+......+.....          
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~-----~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~   77 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDIN-----EHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLS   77 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecccc
Confidence            468999995 999999999999999999999998     443221111000000 000011111222211          


Q ss_pred             --HHccCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           70 --AIKQVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        70 --~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                        .+.++|.||-++.-. ...-+.++....+.-
T Consensus        78 ~~~~~~adlViEav~E~-l~~K~~lf~~l~~~~  109 (186)
T d1wdka3          78 YGDFGNVDLVVEAVVEN-PKVKQAVLAEVENHV  109 (186)
T ss_dssp             STTGGGCSEEEECCCSC-HHHHHHHHHHHHTTS
T ss_pred             cccccccceeeeeecch-HHHHHHHHHHHHhhc
Confidence              134789999877655 566666776666553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.26  E-value=0.0044  Score=45.40  Aligned_cols=73  Identities=15%  Similarity=0.156  Sum_probs=46.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEE-C-C-CCCHHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLY-G-D-LQDHESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~-~-D-~~d~~~~~~~~~--~~d~   76 (292)
                      +|+|.|+ |.+|...++.+...|. .|++.+++     ++|.+..+.+   +.+.+. . + -.+.....+...  ++|+
T Consensus        31 tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~-----~~k~~~ak~l---Ga~~~i~~~~~~~~~~~~~~~~~~~g~D~  101 (176)
T d2fzwa2          31 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN-----KDKFARAKEF---GATECINPQDFSKPIQEVLIEMTDGGVDY  101 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHH---TCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             EEEEecc-hhHHHHHHHHHHHHhcCceEEEccc-----HHHHHHHHHh---CCcEEEeCCchhhHHHHHHHHHcCCCCcE
Confidence            6999997 5689999999999996 56666666     6676555544   333222 1 1 122223323322  6999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      ||.+.|..
T Consensus       102 vid~~G~~  109 (176)
T d2fzwa2         102 SFECIGNV  109 (176)
T ss_dssp             EEECSCCH
T ss_pred             eeecCCCH
Confidence            99998854

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.25  E-value=0.0073  Score=41.40  Aligned_cols=57  Identities=19%  Similarity=0.271  Sum_probs=39.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC--CCcch-hhHhhhhcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS--DPVKG-KLIEIFKNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~v~~v~~   59 (292)
                      ++++|.| .|+||..++..|.+.|.+|+++.|+....  +++-. ...+.+...+++++..
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~~~l~~~D~~~~~~l~~~l~~~Gv~i~~~   80 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQ   80 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSSSSTTSCHHHHHHHHHHHHHTTEEEEES
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEechhhccCCHHHHHHHHHHHHHCCCEEEEC
Confidence            4799999 69999999999999999999998863221  11111 1223345566666555

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.23  E-value=0.0079  Score=44.18  Aligned_cols=96  Identities=18%  Similarity=0.256  Sum_probs=56.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC----------CCCCHHHHHH
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG----------DLQDHESLIK   69 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~----------D~~d~~~~~~   69 (292)
                      |-||.|-| .|.||+.+++.|.+++ .+|.++.....   ......   +...+......          .+.-...+..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~   73 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSP---NYEAFI---AHRRGIRIYVPQQSIKKFEESGIPVAGTVED   73 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSC---SHHHHH---HHHTTCCEECCGGGHHHHHTTTCCCCCCHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCC---cHHHHH---hcccCcceeccCccceeccccceecCCchhh
Confidence            78999999 8999999999999875 78887754321   111111   11111111110          0111112445


Q ss_pred             HHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           70 AIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        70 ~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      ++.++|+||-|.|.+.   ...-++...+.| .|.++.
T Consensus        74 ~~~~vDiViecTG~f~---~~e~a~~hl~~G-~KvIi~  107 (178)
T d1b7go1          74 LIKTSDIVVDTTPNGV---GAQYKPIYLQLQ-RNAIFQ  107 (178)
T ss_dssp             HHHHCSEEEECCSTTH---HHHHHHHHHHTT-CEEEEC
T ss_pred             hhhcCCEEEECCCCcC---CHHHHHHHHHcC-CEEEEE
Confidence            5568999999999753   233455555677 665554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.22  E-value=0.0076  Score=41.10  Aligned_cols=35  Identities=20%  Similarity=0.210  Sum_probs=31.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA   37 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (292)
                      ++++|.| .|+||..++..|.+.|.+|+++.|....
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            5799999 6999999999999999999999987543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.22  E-value=0.0057  Score=44.84  Aligned_cols=87  Identities=16%  Similarity=0.256  Sum_probs=62.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC--------------------
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ--------------------   62 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~--------------------   62 (292)
                      +|+|+| .|-.|.+-++.....|..|++++.+     +++.+.++.+.   -.++..+..                    
T Consensus        31 ~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~-----~~~~~~l~~l~---~~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          31 RVLVFG-VGVAGLQAIATAKRLGAVVMATDVR-----AATKEQVESLG---GKFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----STTHHHHHHTT---CEECCC-----------------------
T ss_pred             EEEEEc-CcHHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHhh---cceEEEeccccccccccccchhhcCHHHH
Confidence            799999 5999999999999999999999998     66665555543   233322211                    


Q ss_pred             --CHHHHHHHHccCCEEEEcCcCCC----chhHHHHHHHHHH
Q 039623           63 --DHESLIKAIKQVDVVISTVSRGQ----IPEQAKIIAAVKE   98 (292)
Q Consensus        63 --d~~~~~~~~~~~d~vi~~a~~~~----~~~~~~l~~a~~~   98 (292)
                        ..+.+.+.+.++|+||-++-.+.    ...++..++.+++
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~  143 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKP  143 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCT
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCC
Confidence              23556677889999999887665    4456666666653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.22  E-value=0.0059  Score=44.79  Aligned_cols=73  Identities=15%  Similarity=0.164  Sum_probs=49.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC-CCC--CHHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYG-DLQ--DHESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~-D~~--d~~~~~~~~~--~~d~   76 (292)
                      +|+|+| .|-+|...++.+...|. .|++.+++     ++|.+..+++   +...+.- .-.  ......+...  ++|+
T Consensus        31 ~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~-----~~r~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          31 TCAVFG-LGCVGLSAIIGCKIAGASRIIAIDIN-----GEKFPKAKAL---GATDCLNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             EEEEEC-CChHHHHHHHHHHHhCCceeeeeccc-----hHHHHHHHHh---CCCcccCCccchhhhhhhHhhhhcCCCcE
Confidence            699998 59999999999999997 57777777     6676555543   4333322 111  2233333332  6999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      +|.|+|..
T Consensus       102 vie~~G~~  109 (174)
T d1e3ia2         102 SLDCAGTA  109 (174)
T ss_dssp             EEESSCCH
T ss_pred             EEEecccc
Confidence            99999854

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.20  E-value=0.006  Score=44.81  Aligned_cols=73  Identities=12%  Similarity=0.155  Sum_probs=51.6

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEE--CCCCC-HHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLY--GDLQD-HESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~--~D~~d-~~~~~~~~~--~~d~   76 (292)
                      +|+|+|+ |-+|...++.+...| .+|++++++     ++|.+....+   +.+.+.  -|-.+ .+.+.+...  ++|+
T Consensus        32 tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~-----~~kl~~Ak~~---GA~~~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          32 TCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLN-----KDKFEKAMAV---GATECISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHH---TCSEEECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceEEEecCc-----HHHHHHHHhc---CCcEEECccccchHHHHHHHHhccccceE
Confidence            6999985 999999999999999 579999998     7787665554   333322  12222 333444443  6999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      +|.+.+..
T Consensus       103 vi~~~g~~  110 (176)
T d1d1ta2         103 TFEVIGHL  110 (176)
T ss_dssp             EEECSCCH
T ss_pred             EEEeCCch
Confidence            99998865

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.18  E-value=0.0058  Score=44.62  Aligned_cols=74  Identities=19%  Similarity=0.164  Sum_probs=49.1

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cCCEEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QVDVVIS   79 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~d~vi~   79 (292)
                      +|+|.|+ |.+|...++.+...|. .|++.+++     ++|.+..+.+-  ..+++..+-.+.+...+...  ++|+||.
T Consensus        35 ~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~-----~~k~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~g~d~vid  106 (172)
T d1h2ba2          35 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK-----EEKLKLAERLG--ADHVVDARRDPVKQVMELTRGRGVNVAMD  106 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS-----HHHHHHHHHTT--CSEEEETTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             EEEEeCC-ChHHHHHHHHHHhhcCcccccccch-----hHHHHHHhhcc--cceeecCcccHHHHHHHhhCCCCceEEEE
Confidence            5899885 9999999999888885 66777777     66665555432  22444433223344444433  5899999


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      ++|..
T Consensus       107 ~~g~~  111 (172)
T d1h2ba2         107 FVGSQ  111 (172)
T ss_dssp             SSCCH
T ss_pred             ecCcc
Confidence            99854

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.12  E-value=0.031  Score=37.64  Aligned_cols=89  Identities=18%  Similarity=0.179  Sum_probs=60.7

Q ss_pred             ceEEEEccCC----------cchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTG----------YIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      ++|||+|+..          +.+.+.+++|.+.|++++.+.-++...+.+         ..-..-+...-...+.+.+++
T Consensus         5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd---------~d~aD~lYfeplt~e~v~~Ii   75 (121)
T d1a9xa4           5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD---------YDTSDRLYFEPVTLEDVLEIV   75 (121)
T ss_dssp             CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS---------TTSSSEEECCCCSHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC---------hhhcCceEEccCCHHHHHHHH
Confidence            5899999632          678899999999999999998886544211         112234455555778888887


Q ss_pred             c--cCCEEEEcCcCCCchhHHHHHHHHHHhCCcc
Q 039623           72 K--QVDVVISTVSRGQIPEQAKIIAAVKEAGNVK  103 (292)
Q Consensus        72 ~--~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~  103 (292)
                      +  ++|.|+-..|   =+...++.....+.| ++
T Consensus        76 ~~E~p~~ii~~~G---GQtalnla~~L~~~g-v~  105 (121)
T d1a9xa4          76 RIEKPKGVIVQYG---GQTPLKLARALEAAG-VP  105 (121)
T ss_dssp             HHHCCSEEECSSS---THHHHTTHHHHHHTT-CC
T ss_pred             HHhCCCEEEeehh---hhhHHHHHHHHHHcC-Cc
Confidence            6  7999886554   244555555566666 54

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.11  E-value=0.0063  Score=41.34  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=56.0

Q ss_pred             ceEEEEccC---CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGT---GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      |+|+|.|+|   +..|..+++.|++.||+|+.+..+..     ..        .++..+ -+      +.++-..+|.++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~-----~i--------~G~~~y-~s------l~~lp~~~D~vv   61 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD-----EI--------EGLKCY-RS------VRELPKDVDVIV   61 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-----EE--------TTEECB-SS------GGGSCTTCCEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccc-----cc--------cCcccc-cc------chhccccceEEE
Confidence            689999998   77999999999999999887743311     00        122221 12      223333679888


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      -+.+   -.....+++.|.+.| ++.++.
T Consensus        62 i~vp---~~~~~~~l~~~~~~g-~k~v~~   86 (116)
T d1y81a1          62 FVVP---PKVGLQVAKEAVEAG-FKKLWF   86 (116)
T ss_dssp             ECSC---HHHHHHHHHHHHHTT-CCEEEE
T ss_pred             EEeC---HHHHHHHHHHHHhcC-CceEEe
Confidence            7665   356777788888888 887664

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.10  E-value=0.016  Score=39.99  Aligned_cols=82  Identities=17%  Similarity=0.264  Sum_probs=55.8

Q ss_pred             ceEEEEccC---CcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGT---GYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      ++|+|.|||   +..|..+.+.|.+.| ++|+.+..+...             -.++.. .-++.|      +-..+|.+
T Consensus         9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~-------------i~G~~~-y~sl~d------lp~~vDlv   68 (129)
T d2csua1           9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE-------------VQGVKA-YKSVKD------IPDEIDLA   68 (129)
T ss_dssp             SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE-------------ETTEEC-BSSTTS------CSSCCSEE
T ss_pred             CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc-------------cCCeEe-ecchhh------cCCCCceE
Confidence            579999999   999999999988766 688887544110             012221 223333      22368999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      +-+.+   -.....+++.|.+.| ++.++.
T Consensus        69 vi~vp---~~~~~~~~~~~~~~g-~~~~vi   94 (129)
T d2csua1          69 IIVVP---KRFVKDTLIQCGEKG-VKGVVI   94 (129)
T ss_dssp             EECSC---HHHHHHHHHHHHHHT-CCEEEE
T ss_pred             EEecC---hHHhHHHHHHHHHcC-CCEEEE
Confidence            98776   356777888888999 887554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.08  E-value=0.011  Score=40.53  Aligned_cols=57  Identities=25%  Similarity=0.346  Sum_probs=40.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC----CCcchhhH-hhhhcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS----DPVKGKLI-EIFKNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~-~~~~~~~v~~v~~   59 (292)
                      ++|+|.| .|++|..++..|.+.|.+|+++.|.+...    +++-.+.+ +.+...+++++..
T Consensus        31 k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~~l~~~~d~~~~~~~~~~l~~~gv~~~~~   92 (123)
T d1nhpa2          31 NNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATG   92 (123)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEES
T ss_pred             CEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCcccccccchhhHHHHHHHhhcCCeEEEeC
Confidence            5799999 69999999999999999999998875432    11112222 2234556666655

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.07  E-value=0.01  Score=40.21  Aligned_cols=34  Identities=26%  Similarity=0.387  Sum_probs=31.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++++|.| .|++|..++..|.+.|.+|+++.|.+.
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            5799999 599999999999999999999998754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.05  E-value=0.0063  Score=44.08  Aligned_cols=72  Identities=19%  Similarity=0.207  Sum_probs=50.1

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-C-HHHHHHHHccCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-D-HESLIKAIKQVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-d-~~~~~~~~~~~d~vi~~   80 (292)
                      +|+|.|+ |-+|...++.+...|.+|++++++     ++|.+..+.   .+.+.+...-. | .+.+.+...+.+.+|.+
T Consensus        30 ~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~-----~~r~~~~k~---~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~  100 (168)
T d1rjwa2          30 WVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG-----DEKLELAKE---LGADLVVNPLKEDAAKFMKEKVGGVHAAVVT  100 (168)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---TTCSEEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred             EEEEeec-ccchhhhhHHHhcCCCeEeccCCC-----HHHhhhhhh---cCcceecccccchhhhhcccccCCCceEEee
Confidence            6899875 889999999999999999999988     667655443   45555544332 2 34455555677777776


Q ss_pred             CcC
Q 039623           81 VSR   83 (292)
Q Consensus        81 a~~   83 (292)
                      ++.
T Consensus       101 ~~~  103 (168)
T d1rjwa2         101 AVS  103 (168)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.02  E-value=0.012  Score=40.13  Aligned_cols=58  Identities=17%  Similarity=0.289  Sum_probs=41.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC----CCcchhhH-hhhhcCCcEEEECC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS----DPVKGKLI-EIFKNLGVNVLYGD   60 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~-~~~~~~~v~~v~~D   60 (292)
                      ++|+|.| .|++|..++..|.+.|.+|+.+.|.+...    +++-.+.+ +.+...+++++...
T Consensus        31 ~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~~l~~~GV~i~~~~   93 (121)
T d1d7ya2          31 SRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFER   93 (121)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEESC
T ss_pred             CeEEEEC-cchhHHHHHHHhhcccceEEEEeeccccccccCCHHHHHHHHHHHHHCCcEEEeCC
Confidence            5799999 69999999999999999999999986432    11112222 33456678776653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.01  E-value=0.012  Score=43.40  Aligned_cols=33  Identities=18%  Similarity=0.188  Sum_probs=29.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      +++.|.| .|.||+.+++.+..-|.+|.+.++..
T Consensus        45 k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~   77 (184)
T d1ygya1          45 KTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV   77 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence            4788888 79999999999998899999998863

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.0068  Score=41.15  Aligned_cols=35  Identities=20%  Similarity=0.285  Sum_probs=31.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA   37 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (292)
                      ++|+|.| .|++|..++..|.+.|.+|+++.|.+..
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence            5799999 6999999999999999999999997543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.00  E-value=0.0079  Score=40.89  Aligned_cols=34  Identities=21%  Similarity=0.477  Sum_probs=31.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|+|.| .|++|..++..|.+.|.+|+++.|...
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence            5899999 599999999999999999999998754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.95  E-value=0.0095  Score=40.80  Aligned_cols=34  Identities=21%  Similarity=0.247  Sum_probs=31.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++++|.| .|++|..++..|.+.|.+|+++.|.+.
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence            5799999 699999999999999999999998754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.92  E-value=0.0075  Score=44.81  Aligned_cols=34  Identities=15%  Similarity=0.055  Sum_probs=30.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|.|.| .|.||+.+++.|..-|.+|.+.+|...
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          45 MHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             cceeecc-ccccchhhhhhhhccCceEEEEeeccc
Confidence            4789999 799999999999999999999998643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.90  E-value=0.0083  Score=42.12  Aligned_cols=82  Identities=12%  Similarity=0.175  Sum_probs=56.8

Q ss_pred             ceEEEEccC---CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGT---GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++|+|.|||   +..|..+++.|.+.||+|+.+.....     .        -.+... .-+      +.++-..+|.++
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~-----~--------i~G~~~-~~s------l~dlp~~iD~v~   79 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE-----E--------VLGRKC-YPS------VLDIPDKIEVVD   79 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-----E--------ETTEEC-BSS------GGGCSSCCSEEE
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc-----c--------cCCCcc-ccc------ccccCccceEEE
Confidence            579999999   88999999999999999887754311     0        012222 112      223334689988


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      -+..   -.....+++.|.+.| ++.+++
T Consensus        80 i~vp---~~~~~~~~~e~~~~g-~k~v~~  104 (139)
T d2d59a1          80 LFVK---PKLTMEYVEQAIKKG-AKVVWF  104 (139)
T ss_dssp             ECSC---HHHHHHHHHHHHHHT-CSEEEE
T ss_pred             EEeC---HHHHHHHHHHHHHhC-CCEEEE
Confidence            7766   456778888888888 887665

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.88  E-value=0.016  Score=42.94  Aligned_cols=33  Identities=15%  Similarity=0.072  Sum_probs=29.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      +++.|.| .|.||+.+++.|..-|.+|.+.++..
T Consensus        48 ~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   80 (191)
T d1gdha1          48 KTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHR   80 (191)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cceEEee-cccchHHHHHHHHhhccccccccccc
Confidence            5799999 79999999999999999999998764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.85  E-value=0.0058  Score=45.44  Aligned_cols=91  Identities=15%  Similarity=0.238  Sum_probs=54.6

Q ss_pred             eEEE-EccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEE-C---CCCCH-HHHHHHH----c
Q 039623            3 ATLI-IGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLY-G---DLQDH-ESLIKAI----K   72 (292)
Q Consensus         3 ~vlI-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~-~---D~~d~-~~~~~~~----~   72 (292)
                      +++| .||+|.+|...++.....|.+|++++|++... .++.   +.+...+.+.+. .   |..+. +.+.++.    .
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~-~~~~---~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL-DEVV---ASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH-HHHH---HHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc-chHH---hhhhhccccEEEeccccchhHHHHHHHHHHhhccC
Confidence            5777 58999999999999999999999999874322 2222   233333443332 2   22221 2233333    2


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ++|+|+++.|..   .....++.++..|
T Consensus       107 ~vdvv~D~vg~~---~~~~~~~~l~~~G  131 (189)
T d1gu7a2         107 EAKLALNCVGGK---SSTGIARKLNNNG  131 (189)
T ss_dssp             CEEEEEESSCHH---HHHHHHHTSCTTC
T ss_pred             CceEEEECCCcc---hhhhhhhhhcCCc
Confidence            589999998733   3344555554433

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=95.78  E-value=0.016  Score=41.75  Aligned_cols=81  Identities=20%  Similarity=0.156  Sum_probs=47.2

Q ss_pred             ceEEEEccCCcchHH-HHHHHHhC-CCCEEEEe-cCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKK-ILEASVKA-GHPTFALV-RESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~-l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      +||.|.| +|.+|+. .+..|... ++++.++. ++     +++.+.+...  .++.     ..+  .+..+.+++|+|+
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~-----~~~~~~~~~~--~~~~-----~~~--~~~~l~~~~D~V~   66 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPT-----RAKALPICES--WRIP-----YAD--SLSSLAASCDAVF   66 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSS-----CTTHHHHHHH--HTCC-----BCS--SHHHHHTTCSEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEech-----hHhhhhhhhc--cccc-----ccc--cchhhhhhccccc
Confidence            5799999 7999975 46666654 57877665 44     4444333221  1222     222  2344567899998


Q ss_pred             EcCcCCCchhHHHHHHHHHHhC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      -+....   .+..++..+.++|
T Consensus        67 I~tp~~---~h~~~~~~al~~g   85 (164)
T d1tlta1          67 VHSSTA---SHFDVVSTLLNAG   85 (164)
T ss_dssp             ECSCTT---HHHHHHHHHHHTT
T ss_pred             ccccch---hcccccccccccc
Confidence            776543   3444444445555

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.75  E-value=0.041  Score=42.42  Aligned_cols=101  Identities=18%  Similarity=0.138  Sum_probs=64.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCC--------------CcchhhHhh-h--hcCCcEEEECCCC-
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASD--------------PVKGKLIEI-F--KNLGVNVLYGDLQ-   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~~~~~~~~~-~--~~~~v~~v~~D~~-   62 (292)
                      .+|+|.| .|.+|++++..|...|. ++++++.+.-..+              ..|.+.+.. +  .++.+++...+.. 
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~  109 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  109 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence            4799999 68899999999999995 6777765421110              112222222 1  2445555544432 


Q ss_pred             CHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           63 DHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +.+.....+...|+|+.+...  ......+-++|.+++ ++.+.
T Consensus       110 ~~~~~~~~~~~~divid~~d~--~~~~~~in~~~~~~~-ip~i~  150 (247)
T d1jw9b_         110 DDAELAALIAEHDLVLDCTDN--VAVRNQLNAGCFAAK-VPLVS  150 (247)
T ss_dssp             CHHHHHHHHHTSSEEEECCSS--HHHHHHHHHHHHHHT-CCEEE
T ss_pred             hhccccccccccceeeeccch--hhhhhhHHHHHHHhC-CCccc
Confidence            445566777899999987654  355667777888887 66444

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.019  Score=43.02  Aligned_cols=89  Identities=17%  Similarity=0.134  Sum_probs=52.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhH-hhhhcCCcEEEEC------CCCCHHHHHHHHc-c
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLI-EIFKNLGVNVLYG------DLQDHESLIKAIK-Q   73 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~v~~v~~------D~~d~~~~~~~~~-~   73 (292)
                      |||++.| ++..|..+++.|.++||+|.++...+..  +.+...+ +.....++.++..      +..+++.+..+-+ +
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~~--~~~~~~v~~~a~~~~ipv~~~~~~~~~~~~~~~~~~~l~~~~   77 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPDK--DGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQALG   77 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCCC--SSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHHTTC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCCc--CcCCChhhhhHHhcCCcccccccccccccccHHHHHHHHHhC
Confidence            7899998 6889999999999999999877643222  1111111 2222345544432      3445555544433 6


Q ss_pred             CCEEEEcCcCCCchhHHHHHHH
Q 039623           74 VDVVISTVSRGQIPEQAKIIAA   95 (292)
Q Consensus        74 ~d~vi~~a~~~~~~~~~~l~~a   95 (292)
                      +|.++.+. ... .....+++.
T Consensus        78 ~Dliv~~~-~~~-ii~~~~l~~   97 (203)
T d2bw0a2          78 AELNVLPF-CSQ-FIPMEIISA   97 (203)
T ss_dssp             CSEEEESS-CSS-CCCHHHHTC
T ss_pred             CCceEEee-cch-hhhhhhhhh
Confidence            89888754 332 334444443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.63  E-value=0.012  Score=43.01  Aligned_cols=73  Identities=16%  Similarity=0.071  Sum_probs=49.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEE-CCCCC--HHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLY-GDLQD--HESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~d--~~~~~~~~~--~~d~   76 (292)
                      +|+|.|+ |-+|...++.+...|. +|++++++     ++|.+..+.+   +.+.+. ..-.|  .+.......  ++|+
T Consensus        30 ~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~-----~~kl~~a~~l---Ga~~~i~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          30 TCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTH-----KDKFPKAIEL---GATECLNPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceeeccCCh-----HHHHHHHHHc---CCcEEEcCCCchhHHHHHHHHhcCCCCcE
Confidence            6999995 9999999999999995 68888888     7777555543   433332 11112  233333333  6999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      +|.+++..
T Consensus       101 vid~~g~~  108 (174)
T d1p0fa2         101 AVECAGRI  108 (174)
T ss_dssp             EEECSCCH
T ss_pred             EEEcCCCc
Confidence            99998854

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.62  E-value=0.024  Score=41.67  Aligned_cols=69  Identities=14%  Similarity=0.151  Sum_probs=42.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEE-ecCCCCCCCcchhhHhhhhc--CCcEEEECCCCCHHHHHHHHc--cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFAL-VRESTASDPVKGKLIEIFKN--LGVNVLYGDLQDHESLIKAIK--QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~--~~v~~v~~D~~d~~~~~~~~~--~~d   75 (292)
                      +||.|.| +|.+|+..++.|... +++|+++ +++     +++.+.+.....  .... +.   .|   +.++++  ++|
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~-----~~~~~~~~~~~~~~~~~~-~~---~~---~~~ll~~~~iD   68 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRS-----LEKAKAFATANNYPESTK-IH---GS---YESLLEDPEID   68 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSS-----HHHHHHHHHHTTCCTTCE-EE---SS---HHHHHHCTTCC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCC-----ccccccchhcccccccee-ec---Cc---HHHhhhccccc
Confidence            4799999 699999999999876 5788866 455     555444332211  1112 12   23   445553  689


Q ss_pred             EEEEcCcC
Q 039623           76 VVISTVSR   83 (292)
Q Consensus        76 ~vi~~a~~   83 (292)
                      +|+-+.+.
T Consensus        69 ~v~I~tp~   76 (184)
T d1ydwa1          69 ALYVPLPT   76 (184)
T ss_dssp             EEEECCCG
T ss_pred             eeeecccc
Confidence            99876554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.56  E-value=0.0041  Score=46.53  Aligned_cols=31  Identities=13%  Similarity=0.132  Sum_probs=27.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |||.|.| .|++|..++..| +.|++|++++-+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din   31 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL   31 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence            7899998 899999998655 679999999988

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.015  Score=39.91  Aligned_cols=34  Identities=24%  Similarity=0.460  Sum_probs=31.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++++|.| .|++|..++..|.+.|.+|+++.|+..
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            5799999 699999999999999999999999754

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.49  E-value=0.015  Score=42.05  Aligned_cols=69  Identities=19%  Similarity=0.192  Sum_probs=40.6

Q ss_pred             ceEEEEccCCcchHH-HHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEE
Q 039623            2 AATLIIGGTGYIGKK-ILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi   78 (292)
                      +||.|.| +|.+|+. .+..|.+. +.++.+.+++     +++.+.+...  .++..+..|+.      ++++ ++|+|+
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~-----~~~~~~~~~~--~~~~~~~~~~~------~ll~~~iD~V~   67 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRN-----PKVLGTLATR--YRVSATCTDYR------DVLQYGVDAVM   67 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSC-----HHHHHHHHHH--TTCCCCCSSTT------GGGGGCCSEEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECC-----HHHHHHHHHh--cccccccccHH------Hhcccccceec
Confidence            6899999 6889976 45566555 4577666665     5555444332  22322233332      2333 689988


Q ss_pred             EcCcCC
Q 039623           79 STVSRG   84 (292)
Q Consensus        79 ~~a~~~   84 (292)
                      -+.+..
T Consensus        68 I~tp~~   73 (167)
T d1xeaa1          68 IHAATD   73 (167)
T ss_dssp             ECSCGG
T ss_pred             cccccc
Confidence            766543

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.42  E-value=0.022  Score=39.11  Aligned_cols=86  Identities=17%  Similarity=0.194  Sum_probs=57.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhC-CCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEEEc
Q 039623            3 ATLIIGGTGYIGKKILEASVKA-GHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVIST   80 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi~~   80 (292)
                      +|+|.| +|.+|+.|++++..+ ++++.++..+.    +.+...    .-.++.++..     +.+.+..+ .++.++.+
T Consensus         5 ~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd----~~k~G~----~I~Gi~V~~~-----~~l~~~~~~~i~iai~~   70 (126)
T d2dt5a2           5 GLCIVG-MGRLGSALADYPGFGESFELRGFFDVD----PEKVGR----PVRGGVIEHV-----DLLPQRVPGRIEIALLT   70 (126)
T ss_dssp             EEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESC----TTTTTC----EETTEEEEEG-----GGHHHHSTTTCCEEEEC
T ss_pred             eEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCc----hHhcCC----EECCEEEecH-----HHHHHHHhhcccEEEEe
Confidence            699999 699999999987644 68888876643    222211    1236666532     33555554 46666655


Q ss_pred             CcCCCchhHHHHHHHHHHhCCcceee
Q 039623           81 VSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        81 a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      +.   -...+.+++.|.+.| ++.+.
T Consensus        71 i~---~~~~~~I~d~l~~~g-Ik~I~   92 (126)
T d2dt5a2          71 VP---REAAQKAADLLVAAG-IKGIL   92 (126)
T ss_dssp             SC---HHHHHHHHHHHHHHT-CCEEE
T ss_pred             CC---HHHHHHHHHHHHHcC-CCEEe
Confidence            54   356778999999998 88665

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.024  Score=40.61  Aligned_cols=68  Identities=18%  Similarity=0.249  Sum_probs=51.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+++|.| .|.+|+.+++.|...|.+|.+..++     |-+  .++.. ..+..+.        .+.+++...|+|+-+.
T Consensus        25 k~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~d-----p~~--al~A~-~dG~~v~--------~~~~a~~~adivvtaT   87 (163)
T d1li4a1          25 KVAVVAG-YGDVGKGCAQALRGFGARVIITEID-----PIN--ALQAA-MEGYEVT--------TMDEACQEGNIFVTTT   87 (163)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHH--HHHHH-HTTCEEC--------CHHHHTTTCSEEEECS
T ss_pred             CEEEEec-cccccHHHHHHHHhCCCeeEeeecc-----cch--hHHhh-cCceEee--------ehhhhhhhccEEEecC
Confidence            5799999 9999999999999999999999987     322  22222 2344433        3557788899999998


Q ss_pred             cCCCc
Q 039623           82 SRGQI   86 (292)
Q Consensus        82 ~~~~~   86 (292)
                      |...+
T Consensus        88 Gn~~v   92 (163)
T d1li4a1          88 GCIDI   92 (163)
T ss_dssp             SCSCS
T ss_pred             CCccc
Confidence            87653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.25  E-value=0.019  Score=41.66  Aligned_cols=78  Identities=19%  Similarity=0.183  Sum_probs=50.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCC--CCHHHHHHHHccCCEEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL--QDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~--~d~~~~~~~~~~~d~vi~   79 (292)
                      ++|+|.|-+.-+|+.++..|+++|..|+....+..    .....-....-...  ...|+  ...+.+++....+|++|.
T Consensus        30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI----QKFTRGESLKLNKH--HVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE----EEEESCCCSSCCCC--EEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCccccHHHHHHHHHHCCCEEEEeccccc----cccccccceeeeee--ccccccccchhHHhhccccCCEEEE
Confidence            57999999999999999999999999986654421    00000000000000  11111  246778888889999999


Q ss_pred             cCcCCC
Q 039623           80 TVSRGQ   85 (292)
Q Consensus        80 ~a~~~~   85 (292)
                      .+|...
T Consensus       104 avG~p~  109 (171)
T d1edza1         104 GVPSEN  109 (171)
T ss_dssp             CCCCTT
T ss_pred             ccCCCc
Confidence            988754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.023  Score=42.55  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=48.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-CC-cchhhHhhhhcCCcEEEE-CCCCCHHHHHHHHc-cCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-DP-VKGKLIEIFKNLGVNVLY-GDLQDHESLIKAIK-QVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~v~~v~-~D~~d~~~~~~~~~-~~d~v   77 (292)
                      |||++.| ++..|..+++.|++.|++|.++.-.+... .. ......+.....++.++. .++.+++.+..+-+ ++|.+
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            7788887 56689999999999999998765432211 00 001111222345677665 46666655443333 78988


Q ss_pred             EEcCc
Q 039623           78 ISTVS   82 (292)
Q Consensus        78 i~~a~   82 (292)
                      +.+..
T Consensus        80 i~~g~   84 (203)
T d2blna2          80 FSFYY   84 (203)
T ss_dssp             EEESC
T ss_pred             eeeec
Confidence            87643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.19  E-value=0.0093  Score=40.82  Aligned_cols=57  Identities=21%  Similarity=0.375  Sum_probs=39.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC--CCcchh-hHhhhhcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS--DPVKGK-LIEIFKNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~v~~v~~   59 (292)
                      ++++|.| .|++|-.++..|.+.|++|+++.|.+...  +++-.+ ..+.+...+++++..
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~~~~~   92 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLN   92 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccccccCCCHHHHHHHHHHHHHCCcEEEeC
Confidence            4789999 69999999999999999999999875432  111111 223344566766654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.19  E-value=0.013  Score=40.11  Aligned_cols=35  Identities=23%  Similarity=0.321  Sum_probs=31.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA   37 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (292)
                      ++++|.| .|++|-.++..|.+.|.+|+++.|++..
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            5799999 6999999999999999999999998554

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.17  E-value=0.06  Score=39.26  Aligned_cols=83  Identities=17%  Similarity=0.195  Sum_probs=47.9

Q ss_pred             Cc--eEEEEccCCcchHHH-HHHHHhCC--CCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--
Q 039623            1 MA--ATLIIGGTGYIGKKI-LEASVKAG--HPTFAL-VRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--   72 (292)
Q Consensus         1 m~--~vlItGatG~iG~~l-~~~L~~~g--~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--   72 (292)
                      |+  ||.|.| +|.+|+.+ +..+.+.+  +++.++ +++     +++.+.+....  +...+..   |   +.++++  
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~-----~~~~~~~~~~~--~~~~~~~---~---~~ell~~~   66 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRT-----RSHAEEFAKMV--GNPAVFD---S---YEELLESG   66 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSS-----HHHHHHHHHHH--SSCEEES---C---HHHHHHSS
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEecc-----Hhhhhhhhccc--cccceee---e---eecccccc
Confidence            75  689999 79999874 66676643  567765 444     55554433321  3333332   3   445564  


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ++|+|+-+.+..   .+..++..+.++|
T Consensus        67 ~id~v~I~tp~~---~h~~~~~~al~~g   91 (181)
T d1zh8a1          67 LVDAVDLTLPVE---LNLPFIEKALRKG   91 (181)
T ss_dssp             CCSEEEECCCGG---GHHHHHHHHHHTT
T ss_pred             ccceeecccccc---ccccccccccccc
Confidence            589998766533   3444444455554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.16  E-value=0.014  Score=43.62  Aligned_cols=67  Identities=18%  Similarity=0.249  Sum_probs=48.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi~~   80 (292)
                      ++|+|-| -|.+|+++++.|.+.|.+|++.+.+     +++....   ...+.+.+.     .+   +++. ++|+++-|
T Consensus        28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d-----~~~~~~~---~~~g~~~~~-----~~---~~~~~~~DI~iPc   90 (201)
T d1c1da1          28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD-----TERVAHA---VALGHTAVA-----LE---DVLSTPCDVFAPC   90 (201)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHH---HHTTCEECC-----GG---GGGGCCCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch-----HHHHHHH---HhhcccccC-----cc---ccccccceeeecc
Confidence            5799999 8999999999999999999988766     4444322   233444332     22   3455 79999998


Q ss_pred             CcCCC
Q 039623           81 VSRGQ   85 (292)
Q Consensus        81 a~~~~   85 (292)
                      |....
T Consensus        91 A~~~~   95 (201)
T d1c1da1          91 AMGGV   95 (201)
T ss_dssp             SCSCC
T ss_pred             ccccc
Confidence            86554

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.07  E-value=0.043  Score=40.69  Aligned_cols=73  Identities=16%  Similarity=0.217  Sum_probs=49.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC-C-HHHHHHHHc--cCCEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ-D-HESLIKAIK--QVDVV   77 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~-d-~~~~~~~~~--~~d~v   77 (292)
                      +|+|.|+ |-+|...++.+...|. +|++++++     ++|.+..+   ..+.+.+.-... | .+.+.++..  ++|++
T Consensus        28 tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~-----~~rl~~a~---~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~v   98 (195)
T d1kola2          28 TVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN-----PARLAHAK---AQGFEIADLSLDTPLHEQIAALLGEPEVDCA   98 (195)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHH---HTTCEEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHhhcccceeeeccc-----chhhHhhh---hccccEEEeCCCcCHHHHHHHHhCCCCcEEE
Confidence            7999985 9999888888877775 68888887     66665444   345555443221 2 234445544  58999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      |.+.|..
T Consensus        99 id~vG~~  105 (195)
T d1kola2          99 VDAVGFE  105 (195)
T ss_dssp             EECCCTT
T ss_pred             EECcccc
Confidence            9999843

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.05  E-value=0.035  Score=39.83  Aligned_cols=55  Identities=20%  Similarity=0.340  Sum_probs=43.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|+|.|-+..+|+.++..|.++|.+|+.......                          |   +.+..+.+|+||.++
T Consensus        38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~--------------------------~---l~~~~~~ADivI~a~   88 (166)
T d1b0aa1          38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK--------------------------N---LRHHVENADLLIVAV   88 (166)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS--------------------------C---HHHHHHHCSEEEECS
T ss_pred             ceEEEEeccccccHHHHHHHHHhhccccccccccc--------------------------h---hHHHHhhhhHhhhhc
Confidence            57999999999999999999999999887754410                          1   345567789999998


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      |...
T Consensus        89 G~p~   92 (166)
T d1b0aa1          89 GKPG   92 (166)
T ss_dssp             CCTT
T ss_pred             cCcc
Confidence            8765

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.95  E-value=0.0072  Score=44.13  Aligned_cols=88  Identities=18%  Similarity=0.111  Sum_probs=55.2

Q ss_pred             ceEEEEccCCcchHH--HHHHHHhC----CCCEEEEecCCCCCCCcchhhHhhh-------hcCCcEEEECCCCCHHHHH
Q 039623            2 AATLIIGGTGYIGKK--ILEASVKA----GHPTFALVRESTASDPVKGKLIEIF-------KNLGVNVLYGDLQDHESLI   68 (292)
Q Consensus         2 ~~vlItGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~v~~v~~D~~d~~~~~   68 (292)
                      |||.|.|| |.+|..  ++..|+..    +.++..++++     +++.+.....       .....++...+  |   ..
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~i~~~t--d---~~   71 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDID-----EERLDAILTIAKKYVEEVGADLKFEKTM--N---LD   71 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSC-----HHHHHHHHHHHHHHHHHTTCCCEEEEES--C---HH
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCCeEEEEeC--C---hh
Confidence            79999995 888865  44555543    3589999998     6655332211       12233333322  3   55


Q ss_pred             HHHccCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           69 KAIKQVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        69 ~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ++++++|+|+++++.........--....+.+
T Consensus        72 eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g  103 (171)
T d1obba1          72 DVIIDADFVINTAMVGGHTYLEKVRQIGEKYG  103 (171)
T ss_dssp             HHHTTCSEEEECCCTTHHHHHHHHHHHHHHTT
T ss_pred             hcccCCCeEeeecccccccceeeehhcchhhh
Confidence            68899999999999876555444444455555

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.87  E-value=0.013  Score=40.67  Aligned_cols=35  Identities=26%  Similarity=0.431  Sum_probs=31.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTA   37 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (292)
                      ++|+|.| +|++|..++..|.+.|.+|+++.+.+..
T Consensus        36 k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          36 NRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            5799999 6999999999999999999999987553

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.86  E-value=0.011  Score=39.85  Aligned_cols=34  Identities=24%  Similarity=0.336  Sum_probs=30.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++++|.| .|++|..++..|.+.|++|+++.|.+.
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            5799999 699999999999999999999998754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.74  E-value=0.08  Score=35.99  Aligned_cols=72  Identities=19%  Similarity=0.224  Sum_probs=52.2

Q ss_pred             ceEEEEccC----------CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGT----------GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      +||||+|+.          -+.+.+.+++|.+.|++++.+.-++...+.+         ..-..-+...-.+.+.+.+++
T Consensus         8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd---------~d~aD~lYfePlt~e~v~~Ii   78 (127)
T d1a9xa3           8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD---------PEMADATYIEPIHWEVVRKII   78 (127)
T ss_dssp             CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC---------GGGSSEEECSCCCHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC---------hhhcceeeeecCCHHHHHHHH
Confidence            589999963          3678899999999999999998885543110         112234456666888899988


Q ss_pred             c--cCCEEEEcCc
Q 039623           72 K--QVDVVISTVS   82 (292)
Q Consensus        72 ~--~~d~vi~~a~   82 (292)
                      +  ++|.|+-..|
T Consensus        79 ~~E~pd~il~~~G   91 (127)
T d1a9xa3          79 EKERPDAVLPTMG   91 (127)
T ss_dssp             HHHCCSEEECSSS
T ss_pred             HHhCcCCeEEEee
Confidence            7  7999986554

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.64  E-value=0.014  Score=45.56  Aligned_cols=34  Identities=26%  Similarity=0.328  Sum_probs=31.1

Q ss_pred             Cce---EEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            1 MAA---TLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         1 m~~---vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |++   |+|+| .|.+|..++..|.++|++|.++.+..
T Consensus         1 m~~~~DvvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           1 MKRHYEAVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             CCSEEEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCccCCEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            765   99999 69999999999999999999999864

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.61  E-value=0.15  Score=36.05  Aligned_cols=30  Identities=17%  Similarity=0.153  Sum_probs=26.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ||.+.| .|.+|..+++.|++.|+.+ +..|+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~   31 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRT   31 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSS
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCC
Confidence            789999 7999999999999988866 46666

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.53  E-value=0.038  Score=39.92  Aligned_cols=33  Identities=6%  Similarity=0.152  Sum_probs=29.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ++|+|.|-+..+|+.|+..|.++|.+|+.....
T Consensus        40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~   72 (170)
T d1a4ia1          40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK   72 (170)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             ceEEEEecCCccchHHHHHHHhccCceEEEecc
Confidence            579999999999999999999999999987665

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.45  E-value=0.018  Score=44.27  Aligned_cols=33  Identities=21%  Similarity=0.364  Sum_probs=30.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      +||+|+| .|..|...+..|.++|++|+++.|..
T Consensus         7 ~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4799999 59999999999999999999999864

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.41  E-value=0.038  Score=40.02  Aligned_cols=73  Identities=18%  Similarity=0.236  Sum_probs=47.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEE-C-CCC-CHHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFKNLGVNVLY-G-DLQ-DHESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~-~-D~~-d~~~~~~~~~--~~d~   76 (292)
                      +|+|.|+ |-+|...+..+...| .+|++++++     ++|.+....   .+.+.+. . +-. ..+.......  ++|+
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~-----~~rl~~a~~---~GAd~~in~~~~~~~~~~~~~~~~~~G~d~  101 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLN-----PDKFEKAKV---FGATDFVNPNDHSEPISQVLSKMTNGGVDF  101 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHH---TTCCEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecch-----HHHHHHHHH---cCCcEEEcCCCcchhHHHHHHhhccCCcce
Confidence            6999996 558888888888877 578888888     777755444   3443322 1 111 1234444443  6999


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      +|.+.|..
T Consensus       102 vid~~G~~  109 (175)
T d1cdoa2         102 SLECVGNV  109 (175)
T ss_dssp             EEECSCCH
T ss_pred             eeeecCCH
Confidence            99999854

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.35  E-value=0.044  Score=39.10  Aligned_cols=72  Identities=26%  Similarity=0.335  Sum_probs=41.1

Q ss_pred             ceEEEEccCCcchHHHH-HHHHhCC-CCEEEEe-cCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH--ccCCE
Q 039623            2 AATLIIGGTGYIGKKIL-EASVKAG-HPTFALV-RESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI--KQVDV   76 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~-~~L~~~g-~~V~~~~-r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~--~~~d~   76 (292)
                      .||.|+| +|.+|+.+. +.|.+.. .++.++. |++..   .+.   ......++.+...+   .+.+.+..  .++|+
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~---~~~---~~a~~~~i~~~~~~---~d~l~~~~~~~~iDi   74 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS---DGL---ARAQRMGVTTTYAG---VEGLIKLPEFADIDF   74 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTC---HHH---HHHHHTTCCEESSH---HHHHHHSGGGGGEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhc---cch---hhhhhcCCcccccc---eeeeeecccccccCE
Confidence            3799999 899999754 5554443 5777764 54221   111   11123455554332   34454443  47899


Q ss_pred             EEEcCcC
Q 039623           77 VISTVSR   83 (292)
Q Consensus        77 vi~~a~~   83 (292)
                      ||.+...
T Consensus        75 Vf~ATpa   81 (157)
T d1nvmb1          75 VFDATSA   81 (157)
T ss_dssp             EEECSCH
T ss_pred             EEEcCCc
Confidence            9987653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.26  E-value=0.019  Score=46.16  Aligned_cols=34  Identities=24%  Similarity=0.416  Sum_probs=31.0

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      +|||+|+| +|.-|...+..|.+.|++|.++.++.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            57899999 69999999999999999999998873

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.17  E-value=0.067  Score=38.33  Aligned_cols=76  Identities=18%  Similarity=0.145  Sum_probs=48.2

Q ss_pred             ceEEEEccCCcchHHHHH-HHHhC-----CCCEEEEecCCCCCCCcchhhHhhh----hcCCcEEEECCCCCHHHHHHHH
Q 039623            2 AATLIIGGTGYIGKKILE-ASVKA-----GHPTFALVRESTASDPVKGKLIEIF----KNLGVNVLYGDLQDHESLIKAI   71 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~-~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~v~~v~~D~~d~~~~~~~~   71 (292)
                      |||.|.|| |.+|...+- .|++.     ..++..++.+     ++|.+...++    ......+...  ++   ..+.+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did-----~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l   69 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDID-----EEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAV   69 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSC-----HHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecC-----cHHHHHHHHHHHhhhccCceEEEe--cC---ccccc
Confidence            78999997 667876663 33321     3578899887     6665433332    2334444443  12   34678


Q ss_pred             ccCCEEEEcCcCCCchh
Q 039623           72 KQVDVVISTVSRGQIPE   88 (292)
Q Consensus        72 ~~~d~vi~~a~~~~~~~   88 (292)
                      +++|+|+..++......
T Consensus        70 ~~aDvVVita~~~~~~~   86 (162)
T d1up7a1          70 VDAKYVIFQFRPGGLKG   86 (162)
T ss_dssp             TTCSEEEECCCTTHHHH
T ss_pred             CCCCEEEEecccCCCCC
Confidence            89999999999775333

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.09  E-value=0.018  Score=45.98  Aligned_cols=34  Identities=18%  Similarity=0.337  Sum_probs=31.3

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |..|+|+| +|..|..++..|.+.|++|.++.+++
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            78899999 69999999999999999999998763

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.03  E-value=0.028  Score=38.07  Aligned_cols=34  Identities=18%  Similarity=0.180  Sum_probs=30.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++|+|.| .|++|..++..|.+.|.+|+.+.|.+.
T Consensus        23 ~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          23 STVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            5799999 699999999999999999999999754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.98  E-value=0.021  Score=44.89  Aligned_cols=33  Identities=15%  Similarity=0.233  Sum_probs=30.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |+|+|+| +|.-|...+..|.++|++|+++-+++
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            7899999 59999999999999999999998863

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.98  E-value=0.023  Score=38.93  Aligned_cols=34  Identities=24%  Similarity=0.212  Sum_probs=30.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      ++++|.| .|+||..++..|.+.|.+|+.+.|.+.
T Consensus        27 ~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          27 GKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            5799999 699999999999999999999988754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.89  E-value=0.03  Score=41.11  Aligned_cols=34  Identities=12%  Similarity=0.121  Sum_probs=30.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   36 (292)
                      +||+|.| .|..|...+..|.+.|+ +|+++.|++.
T Consensus         5 ~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           5 AKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            6899999 59999999999999998 5999998743

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.075  Score=44.45  Aligned_cols=92  Identities=15%  Similarity=0.194  Sum_probs=57.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC---------C-----CcchhhHh----hh-hcCCcEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS---------D-----PVKGKLIE----IF-KNLGVNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---------~-----~~~~~~~~----~~-~~~~v~~v~~D~   61 (292)
                      +||||.|+ |.+|+.+++.|...|. ++++++.+.-..         .     ..|.+...    .+ ..-++..+..++
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i  116 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI  116 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence            47999996 6699999999999996 788887653211         0     11222111    11 123466777777


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHH
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKE   98 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~   98 (292)
                      .+..  .+.++++|+||.+.-..  ..-..+-+.|..
T Consensus       117 ~~~~--~~~~~~~DlVi~~~Dn~--~aR~~in~~c~~  149 (426)
T d1yovb1         117 QDFN--DTFYRQFHIIVCGLDSI--IARRWINGMLIS  149 (426)
T ss_dssp             GGBC--HHHHTTCSEEEECCSCH--HHHHHHHHHHHH
T ss_pred             cchH--HHHHHhcchheeccCcH--HHHHHHHHHHHH
Confidence            6543  35788999999876643  344444455553

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.82  E-value=0.1  Score=36.83  Aligned_cols=33  Identities=18%  Similarity=0.272  Sum_probs=27.9

Q ss_pred             eEEEE-ccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            3 ATLII-GGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         3 ~vlIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      +++|. .+.||+|..++..|.+.|++|+.+.+.+
T Consensus        41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            45565 2369999999999999999999999874

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.14  Score=38.07  Aligned_cols=91  Identities=12%  Similarity=0.145  Sum_probs=55.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCC-CC----cchhhHhhhhcCCcEEEECCCCCHHHHHHHHc--cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTAS-DP----VKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK--QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~--~~   74 (292)
                      |||+++| ++..+..+.+.|++.|++|.++.-.+... ..    ............++........+.+...+.++  ++
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQA   82 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTTC
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhcc
Confidence            7899998 68899999999999999987765432111 00    01111122344567777776666666666665  68


Q ss_pred             CEEEEcCcCCCchhHHHHHHH
Q 039623           75 DVVISTVSRGQIPEQAKIIAA   95 (292)
Q Consensus        75 d~vi~~a~~~~~~~~~~l~~a   95 (292)
                      |.++.+....  .....+++.
T Consensus        83 d~~v~~~~~~--ii~~~il~~  101 (206)
T d1fmta2          83 DVMVVVAYGL--ILPKAVLEM  101 (206)
T ss_dssp             SEEEEESCCS--CCCHHHHHS
T ss_pred             eEEEeecccc--ccchhhHhc
Confidence            8777644432  233444444

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.65  E-value=0.023  Score=41.11  Aligned_cols=88  Identities=17%  Similarity=0.107  Sum_probs=55.0

Q ss_pred             ceEEEEccCCcchHH-HHHHHHhC--C---CCEEEEecCCCCCCCcchhhHhhh-------hcCCcEEEECCCCCHHHHH
Q 039623            2 AATLIIGGTGYIGKK-ILEASVKA--G---HPTFALVRESTASDPVKGKLIEIF-------KNLGVNVLYGDLQDHESLI   68 (292)
Q Consensus         2 ~~vlItGatG~iG~~-l~~~L~~~--g---~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~v~~v~~D~~d~~~~~   68 (292)
                      .||.|.|| |.+|.. ++..|+..  .   -++..++.+     +++.+.....       ......+....  |   ..
T Consensus         4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d---~~   72 (167)
T d1u8xx1           4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDND-----KERQDRIAGACDVFIREKAPDIEFAATT--D---PE   72 (167)
T ss_dssp             EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSC-----HHHHHHHHHHHHHHHHHHCTTSEEEEES--C---HH
T ss_pred             ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCC-----hhHHHHHHHHHHHHHHHhCCCcceEecC--C---hh
Confidence            37999997 556664 44555543  2   378888887     6665422221       12233333332  2   45


Q ss_pred             HHHccCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           69 KAIKQVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        69 ~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ++++++|+||.+++.....+..+.-....++|
T Consensus        73 eal~~AD~Vvitag~~~~~g~~rd~~i~~~~G  104 (167)
T d1u8xx1          73 EAFTDVDFVMAHIRVGKYAMRALDEQIPLKYG  104 (167)
T ss_dssp             HHHSSCSEEEECCCTTHHHHHHHHHHHHHTTT
T ss_pred             hccCCCCEEEECCCcCCCCceeHHHhhchhcC
Confidence            78899999999999887666666655666666

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.63  E-value=0.026  Score=44.48  Aligned_cols=34  Identities=32%  Similarity=0.351  Sum_probs=31.0

Q ss_pred             Cc-eEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            1 MA-ATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         1 m~-~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |+ +|+|.| .|-.|..++..|.+.|++|.++.|++
T Consensus         1 mk~~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAIIG-AGPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            77 599999 59999999999999999999999873

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.42  E-value=0.13  Score=40.34  Aligned_cols=32  Identities=16%  Similarity=0.185  Sum_probs=28.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ++|+|-| -|.+|+++++.|.+.|.+|++++-+
T Consensus        37 ktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          37 KTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            4799999 7999999999999999999988654

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=93.31  E-value=0.25  Score=36.25  Aligned_cols=91  Identities=19%  Similarity=0.260  Sum_probs=61.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCC-C-----------------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL-Q-----------------   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~-~-----------------   62 (292)
                      +||.|.| -|..|.+++..|.+.|. .|..+.-+..   ..   .+... ....++..+.- +                 
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD---~~---~L~~~-~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~   72 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTD---LQ---VLEAS-NADVKIQIGENITRGLGAGGRPEIGEQAAL   72 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESC---HH---HHHTC-CCSEEEECCTTTTTTSCCTTCHHHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCC---HH---HHhcC-CcceEEecccccCCCcccccCchhhHhHHH
Confidence            5899999 68899999999999873 4554444421   11   11111 12233434321 1                 


Q ss_pred             -CHHHHHHHHccCCEEEEcCcCCC---chhHHHHHHHHHHhC
Q 039623           63 -DHESLIKAIKQVDVVISTVSRGQ---IPEQAKIIAAVKEAG  100 (292)
Q Consensus        63 -d~~~~~~~~~~~d~vi~~a~~~~---~~~~~~l~~a~~~~~  100 (292)
                       +.+.+.+.++++|.||-+||...   ...+..+++.|++.+
T Consensus        73 e~~~~I~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g  114 (194)
T d1w5fa1          73 ESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMG  114 (194)
T ss_dssp             HTHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcC
Confidence             35678888889999999999877   667778899999887

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.30  E-value=0.046  Score=40.03  Aligned_cols=72  Identities=11%  Similarity=0.062  Sum_probs=45.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh----------------cCCcEEEECCCCCHH
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK----------------NLGVNVLYGDLQDHE   65 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----------------~~~v~~v~~D~~d~~   65 (292)
                      ++||..| +| .|+... .|.++|++|++++.+     +.-.+..+...                .....++.+|..+..
T Consensus        22 ~rvLd~G-CG-~G~~a~-~la~~G~~V~gvD~S-----~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          22 ARVLVPL-CG-KSQDMS-WLSGQGYHVVGAELS-----EAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             CEEEETT-TC-CSHHHH-HHHHHCCEEEEEEEC-----HHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CEEEEec-Cc-CCHHHH-HHHHcCCceEeeccc-----HHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            4799999 56 676444 677889999999988     44333333221                234678888887744


Q ss_pred             HHHHHHccCCEEEEcCcC
Q 039623           66 SLIKAIKQVDVVISTVSR   83 (292)
Q Consensus        66 ~~~~~~~~~d~vi~~a~~   83 (292)
                      .  .....+|.|+.....
T Consensus        94 ~--~~~~~~D~i~~~~~l  109 (201)
T d1pjza_          94 A--RDIGHCAAFYDRAAM  109 (201)
T ss_dssp             H--HHHHSEEEEEEESCG
T ss_pred             c--ccccceeEEEEEeee
Confidence            3  122356877764443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.15  E-value=0.048  Score=41.50  Aligned_cols=69  Identities=10%  Similarity=0.058  Sum_probs=48.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHc-cCCEEEEc
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIK-QVDVVIST   80 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~-~~d~vi~~   80 (292)
                      ++|+|-| -|.+|+++++.|.+.|.+|++.+.+     +.+.+.+...  .+.+.+     +++   +++. +||+++-|
T Consensus        40 ~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~-----~~~~~~~~~~--~g~~~~-----~~~---~~~~~~cDIl~Pc  103 (230)
T d1leha1          40 LAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN-----KAAVSAAVAE--EGADAV-----APN---AIYGVTCDIFAPC  103 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHH--HCCEEC-----CGG---GTTTCCCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc-----HHHHHHHHHh--cCCccc-----CCc---ccccccccEeccc
Confidence            5799999 7999999999999999999988766     4444333222  233322     222   2344 79999999


Q ss_pred             CcCCCc
Q 039623           81 VSRGQI   86 (292)
Q Consensus        81 a~~~~~   86 (292)
                      |-...+
T Consensus       104 A~~~~I  109 (230)
T d1leha1         104 ALGAVL  109 (230)
T ss_dssp             SCSCCB
T ss_pred             cccccc
Confidence            986653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.14  E-value=0.18  Score=38.61  Aligned_cols=32  Identities=22%  Similarity=0.189  Sum_probs=28.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ++|+|-| -|.+|+++++.|.+.|.+|++++-.
T Consensus        32 ~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          32 KTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            5799999 7999999999999999999988754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.10  E-value=0.038  Score=44.60  Aligned_cols=34  Identities=21%  Similarity=0.216  Sum_probs=30.1

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG--HPTFALVRES   35 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~   35 (292)
                      ||||+|+| +|.-|...+..|+++|  ++|+++-|++
T Consensus         4 ~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            58899999 5999999999999876  6899999874

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.06  E-value=0.057  Score=35.69  Aligned_cols=34  Identities=6%  Similarity=0.077  Sum_probs=28.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      |+|+|.| +|.-|..++..|...+.+++.+.|++.
T Consensus        33 K~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          33 ESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            6899999 799999999999988877776766644

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.03  E-value=0.043  Score=42.28  Aligned_cols=33  Identities=15%  Similarity=0.080  Sum_probs=30.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      +||+|.| .|..|..++..|.++|++|+++.|++
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            6899999 59999999999999999999999874

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.88  E-value=0.049  Score=41.26  Aligned_cols=31  Identities=13%  Similarity=0.255  Sum_probs=29.0

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |+|+| +|..|...+..|.++|++|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            89999 79999999999999999999999874

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.79  E-value=0.28  Score=36.42  Aligned_cols=91  Identities=18%  Similarity=0.208  Sum_probs=61.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCC------------------
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQ------------------   62 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~------------------   62 (292)
                      .||.|.| -|.-|.+++..|.+.|. .|..+.-+..     .. .+... .....+..+.-.                  
T Consensus        16 ~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD-----~~-~L~~~-~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~   87 (209)
T d2vapa1          16 AKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTD-----AQ-QLIRT-KADKKILIGKKLTRGLGAGGNPKIGEEAAK   87 (209)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESB-----HH-HHHTS-CCSEEEECCTTTTTTBCCTTCHHHHHHHHH
T ss_pred             CcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCC-----HH-HHhcC-CcchhcccccccccccccccchHHHHHHHH
Confidence            3799999 68899999999999884 4655554421     11 11111 112333333221                  


Q ss_pred             -CHHHHHHHHccCCEEEEcCcCCC---chhHHHHHHHHHHhC
Q 039623           63 -DHESLIKAIKQVDVVISTVSRGQ---IPEQAKIIAAVKEAG  100 (292)
Q Consensus        63 -d~~~~~~~~~~~d~vi~~a~~~~---~~~~~~l~~a~~~~~  100 (292)
                       +.+.+.+.++++|.||-+||...   .-.+..+++.|++.+
T Consensus        88 e~~~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g  129 (209)
T d2vapa1          88 ESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIG  129 (209)
T ss_dssp             HTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcC
Confidence             34578888889999999999877   556677888999887

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.75  E-value=0.1  Score=37.61  Aligned_cols=92  Identities=16%  Similarity=0.103  Sum_probs=49.5

Q ss_pred             ceEEEEccCCcch--HHHHHHHHhCC----CCEEEEecCCCCCCCcchhhHhhh-----hcCCcEEEECCCCCHHHHHHH
Q 039623            2 AATLIIGGTGYIG--KKILEASVKAG----HPTFALVRESTASDPVKGKLIEIF-----KNLGVNVLYGDLQDHESLIKA   70 (292)
Q Consensus         2 ~~vlItGatG~iG--~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~v~~v~~D~~d~~~~~~~   70 (292)
                      |||.|.|| |.+|  ..++..+....    -++..++.+..   ..+.+.++..     ...+...-....+|   ..+.
T Consensus         2 ~KI~iIGa-Gs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~---~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~a   74 (169)
T d1s6ya1           2 LKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEG---KEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRA   74 (169)
T ss_dssp             EEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGG---HHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHH
T ss_pred             cEEEEECC-ChhhHHHHHHHHHHhccccCCCEEEEEcCCcc---HHHHHHHHHHHHHHHHhcCCCceeeecCC---chhh
Confidence            68999996 4344  45555444432    37778887621   1233333321     12233333333334   3467


Q ss_pred             HccCCEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           71 IKQVDVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        71 ~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      ++++|+|+.+++...-.+..+.-....++|
T Consensus        75 l~gaDvVv~ta~~~~~~~~~r~~~i~~~~g  104 (169)
T d1s6ya1          75 LDGADFVTTQFRVGGLEARAKDERIPLKYG  104 (169)
T ss_dssp             HTTCSEEEECCCTTHHHHHHHHHHTGGGGT
T ss_pred             cCCCCEEEEccccCCCCCeehhhhhhhhcC
Confidence            889999999999876443333333333344

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.55  E-value=0.065  Score=39.09  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=30.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|+|.| +|..|-..+..|.++||+|+++.+.+
T Consensus        44 k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          44 KNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            5799999 69999999999999999999999874

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.50  E-value=0.048  Score=42.76  Aligned_cols=33  Identities=18%  Similarity=0.136  Sum_probs=30.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |||+|+| +|.-|...+..|.++|++|+++.+++
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            7899999 69999999999999999999998763

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.02  E-value=0.065  Score=40.54  Aligned_cols=71  Identities=23%  Similarity=0.223  Sum_probs=40.5

Q ss_pred             eEEEEccCCcchH-HHHHHHHhC-CCCEEEE-ecCCCCCCCcchhhHhhhhcCCcEEE-ECCCCCHHHHHHHHc--cCCE
Q 039623            3 ATLIIGGTGYIGK-KILEASVKA-GHPTFAL-VRESTASDPVKGKLIEIFKNLGVNVL-YGDLQDHESLIKAIK--QVDV   76 (292)
Q Consensus         3 ~vlItGatG~iG~-~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~d~~~~~~~~~--~~d~   76 (292)
                      +|.|.| +|.+|+ +++..+... +.+|.++ +|+     +++.+.+....  +++.. .-..+|   +.++++  ++|+
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~-----~~~a~~~~~~~--~i~~~~~~~~~d---~~ell~~~~iD~  103 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGN-----AEKAKIVAAEY--GVDPRKIYDYSN---FDKIAKDPKIDA  103 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSC-----HHHHHHHHHHT--TCCGGGEECSSS---GGGGGGCTTCCE
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCC-----HHHHHHHHHhh--ccccccccccCc---hhhhccccccee
Confidence            699999 699997 566666554 5787765 455     55554443321  22100 001223   334554  5888


Q ss_pred             EEEcCcCC
Q 039623           77 VISTVSRG   84 (292)
Q Consensus        77 vi~~a~~~   84 (292)
                      |+-+....
T Consensus       104 V~I~tp~~  111 (221)
T d1h6da1         104 VYIILPNS  111 (221)
T ss_dssp             EEECSCGG
T ss_pred             eeeccchh
Confidence            88766643

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.00  E-value=0.048  Score=38.50  Aligned_cols=66  Identities=18%  Similarity=0.094  Sum_probs=39.2

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCcC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVSR   83 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~~   83 (292)
                      |-+.| +|.+|+++++.|.+.++.+.+.+|+     +++.+.+......    ...+.      .++++.+|+||.+...
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~-----~~~~~~l~~~~~~----~~~~~------~~~~~~~DiVil~v~d   65 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRS-----IDRARNLAEVYGG----KAATL------EKHPELNGVVFVIVPD   65 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSS-----HHHHHHHHHHTCC----CCCSS------CCCCC---CEEECSCT
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCC-----hhhhcchhhcccc----cccch------hhhhccCcEEEEeccc
Confidence            45678 8999999999886644445678888     7777666553221    11222      2356678999998875


Q ss_pred             CC
Q 039623           84 GQ   85 (292)
Q Consensus        84 ~~   85 (292)
                      ..
T Consensus        66 ~~   67 (153)
T d2i76a2          66 RY   67 (153)
T ss_dssp             TT
T ss_pred             hh
Confidence            44

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.97  E-value=0.097  Score=37.20  Aligned_cols=67  Identities=21%  Similarity=0.291  Sum_probs=51.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      |+++|.| =|.+|+.+++.|...|.+|+++..+     |-+  .++.. .++.++.        .+.++++..|++|-+.
T Consensus        24 k~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~D-----Pi~--alqA~-mdGf~v~--------~~~~a~~~aDi~vTaT   86 (163)
T d1v8ba1          24 KIVVICG-YGDVGKGCASSMKGLGARVYITEID-----PIC--AIQAV-MEGFNVV--------TLDEIVDKGDFFITCT   86 (163)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC-----HHH--HHHHH-TTTCEEC--------CHHHHTTTCSEEEECC
T ss_pred             CEEEEec-ccccchhHHHHHHhCCCEEEEEecC-----chh--hHHHH-hcCCccC--------chhHccccCcEEEEcC
Confidence            5789999 8999999999999999999999888     422  23332 3455542        2457888899999999


Q ss_pred             cCCC
Q 039623           82 SRGQ   85 (292)
Q Consensus        82 ~~~~   85 (292)
                      |...
T Consensus        87 Gn~~   90 (163)
T d1v8ba1          87 GNVD   90 (163)
T ss_dssp             SSSS
T ss_pred             CCCc
Confidence            8876

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.95  E-value=0.049  Score=38.41  Aligned_cols=32  Identities=25%  Similarity=0.362  Sum_probs=28.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ++|||+|| |.+|..-++.|++.|.+|++++..
T Consensus        14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57999996 999999999999999999999654

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.77  E-value=0.067  Score=39.43  Aligned_cols=33  Identities=9%  Similarity=0.103  Sum_probs=28.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~   35 (292)
                      |||+|.| .|++|..++..|.+.+  .+|+.+.|.+
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            7899999 5999999999998864  5788888764

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.76  E-value=0.013  Score=44.72  Aligned_cols=26  Identities=23%  Similarity=0.309  Sum_probs=23.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPT   28 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V   28 (292)
                      |||+|+| +|.+|..++-.|.++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            7899999 6999999999999999864

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.62  E-value=0.39  Score=35.49  Aligned_cols=82  Identities=16%  Similarity=0.143  Sum_probs=51.2

Q ss_pred             eEEEEccCCcchHH-HHHHH---HhC-----CCCEEEEecCCCCCC-------------CcchhhHhhhhcCCcEEEECC
Q 039623            3 ATLIIGGTGYIGKK-ILEAS---VKA-----GHPTFALVRESTASD-------------PVKGKLIEIFKNLGVNVLYGD   60 (292)
Q Consensus         3 ~vlItGatG~iG~~-l~~~L---~~~-----g~~V~~~~r~~~~~~-------------~~~~~~~~~~~~~~v~~v~~D   60 (292)
                      +++|.||||-+... |...|   ...     +..|++++|+.-+..             .+....++. ....+.++.+|
T Consensus        22 t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~-f~~~~~Y~~~d  100 (203)
T d1qkia1          22 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLED-FFARNSYVAGQ  100 (203)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHH-HHTTEECCBCC
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHH-HHHhhccccCc
Confidence            58999999998873 33333   233     357999999754320             000111111 24578999999


Q ss_pred             CCCHHHHHHHHc---------cCCEEEEcCcCCC
Q 039623           61 LQDHESLIKAIK---------QVDVVISTVSRGQ   85 (292)
Q Consensus        61 ~~d~~~~~~~~~---------~~d~vi~~a~~~~   85 (292)
                      +.|++++.++-+         ....|+.+|-++.
T Consensus       101 ~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvpP~  134 (203)
T d1qkia1         101 YDDAASYQRLNSHMNALHLGSQANRLFYLALPPT  134 (203)
T ss_dssp             TTCHHHHHHHHHHHHHTTTTTTSEEEEEECSCHH
T ss_pred             CCChhhHHHHHHHHHHHhcCCCcceEEEEecCHH
Confidence            999988766532         2457888887665

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.33  E-value=0.24  Score=32.98  Aligned_cols=57  Identities=16%  Similarity=0.177  Sum_probs=36.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC---CCCEEEEecCCCCCCC---cch-hhHhhhhcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA---GHPTFALVRESTASDP---VKG-KLIEIFKNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~---~~~-~~~~~~~~~~v~~v~~   59 (292)
                      ++++|.|| |++|..++..|.+-   |.+|+++.|.+.....   +-. ...+.+...|++++..
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL~~~d~~~~~~l~~~l~~~GV~v~~~   84 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQLTANGIQILTK   84 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhhcccchHHHHHHHHHHHhcCcEEEcC
Confidence            57999995 99999999776654   5679999987543311   111 1112334556666655

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.27  E-value=0.081  Score=37.92  Aligned_cols=33  Identities=12%  Similarity=0.106  Sum_probs=28.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC--CEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH--PTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~   35 (292)
                      |||+|.| .|+.|-.++..|.+.++  +|+++.+++
T Consensus         3 krivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            6899999 59999999999999875  677777664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.16  E-value=0.066  Score=42.56  Aligned_cols=33  Identities=24%  Similarity=0.325  Sum_probs=30.2

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|+|+| +|..|...+..|.++|++|.++.+++
T Consensus        31 kkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          31 KHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5899999 69999999999999999999998763

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.10  E-value=0.19  Score=36.15  Aligned_cols=33  Identities=18%  Similarity=0.224  Sum_probs=28.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|+|.| .|++|..++..|.+.|.+|+++.+.+
T Consensus         4 ~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           4 DNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence            4799999 69999999999999999888776654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=91.01  E-value=0.51  Score=33.67  Aligned_cols=96  Identities=20%  Similarity=0.172  Sum_probs=57.5

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhh-cC--------------------CcEEEECC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFK-NL--------------------GVNVLYGD   60 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~--------------------~v~~v~~D   60 (292)
                      |||.|=| =|-||+.+.+.|.+++.+|.++.-..      ..+.+..+. .+                    +-.+....
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~~------~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~   73 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDLT------DNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATA   73 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSS------CHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCc------chhhhhheeecccccCccccccccccceeEecceeEEEEe
Confidence            6899998 79999999999999999988876431      112222221 00                    11111222


Q ss_pred             CCCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeecc
Q 039623           61 LQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPS  108 (292)
Q Consensus        61 ~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s  108 (292)
                      -.|++.+.=.-.++|+|+-|.|.+.   +..-++.-.+.| ++++|.|
T Consensus        74 ~~~p~~i~W~~~gvdiViEcTG~f~---~~~~~~~hl~~g-akkViiS  117 (168)
T d2g82a1          74 VKDPKEIPWAEAGVGVVIESTGVFT---DADKAKAHLEGG-AKKVIIT  117 (168)
T ss_dssp             CSSGGGCCTGGGTEEEEEECSSSCC---BHHHHTHHHHTT-CSEEEES
T ss_pred             cCChHHCcccccCCceeEecccccc---chHHhhhhhccc-cceeeec
Confidence            2345444322237999999999775   222333334467 8888874

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.00  E-value=0.1  Score=39.81  Aligned_cols=31  Identities=19%  Similarity=0.225  Sum_probs=26.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHh-CCCCEEEEec
Q 039623            2 AATLIIGGTGYIGKKILEASVK-AGHPTFALVR   33 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r   33 (292)
                      ++|+|-| .|.+|+++++.|.+ .|..|++++-
T Consensus        32 ~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          32 ATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            5799998 89999999999975 5999988764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.84  E-value=0.065  Score=38.93  Aligned_cols=33  Identities=18%  Similarity=0.274  Sum_probs=26.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      -.+|+|.| .|++|-.++..|.+.|.++.++.+.
T Consensus         3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence            03699999 6999999999999999776655543

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.75  E-value=0.12  Score=35.67  Aligned_cols=84  Identities=8%  Similarity=0.035  Sum_probs=52.1

Q ss_pred             ceEEEEccC---CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGT---GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++|+|.|||   +..|..+++.|.+.||++..+.-++...   ..        .+... ..++      .++-..+|.++
T Consensus        14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~---~i--------~g~~~-~~~l------~~i~~~iD~v~   75 (136)
T d1iuka_          14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE---EL--------FGEEA-VASL------LDLKEPVDILD   75 (136)
T ss_dssp             CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS---EE--------TTEEC-BSSG------GGCCSCCSEEE
T ss_pred             CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccc---ee--------eceec-ccch------hhccCCCceEE
Confidence            579999999   7789999999999999988775432110   00        11111 1122      12223578888


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP  107 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~  107 (292)
                      -+...   .....+++.|.+.| ++.++.
T Consensus        76 v~~p~---~~v~~~v~~~~~~g-~k~i~~  100 (136)
T d1iuka_          76 VFRPP---SALMDHLPEVLALR-PGLVWL  100 (136)
T ss_dssp             ECSCH---HHHTTTHHHHHHHC-CSCEEE
T ss_pred             EeccH---HHHHHHHHHHHhhC-CCeEEE
Confidence            77653   44555666667777 776654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.63  E-value=0.35  Score=32.07  Aligned_cols=57  Identities=21%  Similarity=0.195  Sum_probs=37.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHh---CCCCEEEEecCCCCCC---CcchhhH-hhhhcCCcEEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVK---AGHPTFALVRESTASD---PVKGKLI-EIFKNLGVNVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~---~~~~~~~-~~~~~~~v~~v~~   59 (292)
                      ++++|.| .|++|-.++..|.+   .|.+|+.+.|.+....   ++-.+.+ +.+...+++++..
T Consensus        19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~il~~~d~~~~~~~~~~l~~~GI~v~~~   82 (117)
T d1feca2          19 KRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTH   82 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEET
T ss_pred             CeEEEEC-CChHHHHHHHHhHhhcccccccceecccccccccccchhhHHHHHHHhhCcEEEEcC
Confidence            5799999 59999999986654   4789999998754321   1111222 2344556666655

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.52  E-value=0.078  Score=40.19  Aligned_cols=74  Identities=8%  Similarity=0.014  Sum_probs=46.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh---------------------hhcCCcEEEECC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI---------------------FKNLGVNVLYGD   60 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---------------------~~~~~v~~v~~D   60 (292)
                      ++||..| +| .|+. +..|.+.|++|++++-+     +.-++....                     ....+++++.+|
T Consensus        47 ~rvLd~G-CG-~G~~-a~~LA~~G~~V~gvD~S-----~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d  118 (229)
T d2bzga1          47 LRVFFPL-CG-KAVE-MKWFADRGHSVVGVEIS-----ELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCS  118 (229)
T ss_dssp             CEEEETT-CT-TCTH-HHHHHHTTCEEEEECSC-----HHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             CEEEEeC-CC-CcHH-HHHHHhCCCcEEEEeCC-----HHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcc
Confidence            4799998 66 4654 55678899999999987     333222111                     123468899999


Q ss_pred             CCCHHHHHHHHccCCEEEEcCcCCC
Q 039623           61 LQDHESLIKAIKQVDVVISTVSRGQ   85 (292)
Q Consensus        61 ~~d~~~~~~~~~~~d~vi~~a~~~~   85 (292)
                      +.+...  .....+|+|+.......
T Consensus       119 ~~~l~~--~~~~~fd~i~~~~~l~~  141 (229)
T d2bzga1         119 IFDLPR--TNIGKFDMIWDRGALVA  141 (229)
T ss_dssp             GGGGGG--SCCCCEEEEEESSSTTT
T ss_pred             hhhccc--cccCceeEEEEEEEEEe
Confidence            876431  11125788887666554

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.39  E-value=0.98  Score=33.03  Aligned_cols=90  Identities=12%  Similarity=0.211  Sum_probs=60.9

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCC-------------------C
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDL-------------------Q   62 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~-------------------~   62 (292)
                      +|-|.| -|..|.+++..|.+.+. .|..+.-+..     .. .+.. .....++..+.-                   .
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD-----~~-~L~~-~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e   74 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTD-----AQ-ALLM-SDADVKLDVGRDSTRGLGAGADPEVGRKAAED   74 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESC-----HH-HHHH-CCCSEEEECCTTTC-----CCCHHHHHHHHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcch-----HH-HHhc-CCcchhhccccccccCCCcCcChhhhHhhHHH
Confidence            577888 57789999999999884 4655554421     11 1111 112233333321                   2


Q ss_pred             CHHHHHHHHccCCEEEEcCcCCC---chhHHHHHHHHHHhC
Q 039623           63 DHESLIKAIKQVDVVISTVSRGQ---IPEQAKIIAAVKEAG  100 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~~~---~~~~~~l~~a~~~~~  100 (292)
                      +.+.+.++++++|.||-+||...   .-.+.-+++.|++.+
T Consensus        75 ~~~~I~~~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g  115 (198)
T d1rq2a1          75 AKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLG  115 (198)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcC
Confidence            56778888999999999999877   666777889999888

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.24  E-value=0.23  Score=35.60  Aligned_cols=74  Identities=20%  Similarity=0.232  Sum_probs=53.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTV   81 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a   81 (292)
                      ++|.|+| -|-.|++=+..|.+.|.+|++-.|..+++       .+.....+.++        -++.++.+..|+|..+.
T Consensus        17 k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s-------~~~A~~~Gf~v--------~~~~eA~~~aDiim~L~   80 (182)
T d1np3a2          17 KKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSAT-------VAKAEAHGLKV--------ADVKTAVAAADVVMILT   80 (182)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHH-------HHHHHHTTCEE--------ECHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCcc-------HHHHhhhcccc--------ccHHHHhhhcCeeeeec
Confidence            5799999 89999999999999999999888874422       12222456655        23567888999999988


Q ss_pred             cCCCchhHHHHHH
Q 039623           82 SRGQIPEQAKIIA   94 (292)
Q Consensus        82 ~~~~~~~~~~l~~   94 (292)
                      +.   .....+.+
T Consensus        81 PD---~~q~~vy~   90 (182)
T d1np3a2          81 PD---EFQGRLYK   90 (182)
T ss_dssp             CH---HHHHHHHH
T ss_pred             ch---HHHHHHHH
Confidence            73   34444443

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.93  E-value=0.13  Score=39.83  Aligned_cols=31  Identities=19%  Similarity=0.252  Sum_probs=28.8

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |+|.| .|..|..++..|.++|++|.++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            89999 69999999999999999999999863

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.79  E-value=0.14  Score=38.70  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=30.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ++|+|.| +|..|...+..|.+.|++|+++.++.
T Consensus        50 k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          50 DSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            5799999 69999999999999999999998864

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.77  E-value=0.22  Score=35.72  Aligned_cols=22  Identities=18%  Similarity=0.312  Sum_probs=18.3

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA   24 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~   24 (292)
                      ++|+|.| +|.+|+..++.|.+.
T Consensus         8 ~kv~iIG-~G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           8 FGVVVVG-VGRAGSVRLRDLKDP   29 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTSH
T ss_pred             cEEEEEc-CCHHHHHHHHHHHhC
Confidence            4799999 699999988887664

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=89.58  E-value=0.56  Score=37.58  Aligned_cols=72  Identities=21%  Similarity=0.254  Sum_probs=52.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-C-CCEEEEecCCCCCCCcchhhHh-hhh-cCCcEEEECCCCCHHHHHHHHccCCEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-G-HPTFALVRESTASDPVKGKLIE-IFK-NLGVNVLYGDLQDHESLIKAIKQVDVV   77 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~v~~v~~D~~d~~~~~~~~~~~d~v   77 (292)
                      +++.|+| +|.++..-++.++.. + .+|++.+|+     +++.+.+. .+. ..++++..++     ++.++++++|+|
T Consensus       129 ~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~-----~~~~~~~~~~l~~~~g~~v~~~~-----s~~eav~~ADIi  197 (340)
T d1x7da_         129 RKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTD-----PLATAKLIANLKEYSGLTIRRAS-----SVAEAVKGVDII  197 (340)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSS-----HHHHHHHHHHHTTCTTCEEEECS-----SHHHHHTTCSEE
T ss_pred             ceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecC-----hHHHHHHHHhhhhccCCCceecC-----CHHHHHhcCCce
Confidence            4689999 899999988888664 5 589999998     66654443 332 3478887775     366789999999


Q ss_pred             EEcCcCC
Q 039623           78 ISTVSRG   84 (292)
Q Consensus        78 i~~a~~~   84 (292)
                      +-+.+..
T Consensus       198 ~t~Tas~  204 (340)
T d1x7da_         198 TTVTADK  204 (340)
T ss_dssp             EECCCCS
T ss_pred             eeccccC
Confidence            9776543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.51  E-value=0.15  Score=40.07  Aligned_cols=33  Identities=24%  Similarity=0.426  Sum_probs=29.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   35 (292)
                      .+|+|+| .|.+|..++..|.++|+ +|.++.|+.
T Consensus         2 ~dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4799999 59999999999999995 799999874

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.44  E-value=0.61  Score=34.20  Aligned_cols=90  Identities=19%  Similarity=0.209  Sum_probs=58.5

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC-----------CC--------C
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEIFKNLGVNVLYG-----------DL--------Q   62 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~-----------D~--------~   62 (292)
                      +|.|.| -|..|.+++..|.+.+. .|..+.-+....   .+   ... +...++..+           |.        .
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~---~L---~~~-~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e   74 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQ---AL---KNI-AARTVLQLGPGVTKGLGAGANPEVGRQAALE   74 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTG---GG---SSC-SCSEEEECCHHHHTTBCCCSCHHHHHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHH---HH---hcC-CccceeccccccccCCCCCCChHHHHHHHHH
Confidence            588999 68899999999999873 454444332211   11   000 011112111           11        1


Q ss_pred             CHHHHHHHHccCCEEEEcCcCCC---chhHHHHHHHHHHhC
Q 039623           63 DHESLIKAIKQVDVVISTVSRGQ---IPEQAKIIAAVKEAG  100 (292)
Q Consensus        63 d~~~~~~~~~~~d~vi~~a~~~~---~~~~~~l~~a~~~~~  100 (292)
                      +.+.+.++++++|.||-+||...   .-.+.-+++.|++.+
T Consensus        75 ~~~~I~~~l~~~d~vfi~AGlGGGTGtgaapviA~~ake~g  115 (198)
T d1ofua1          75 DRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMG  115 (198)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCeEEEEecCCCCccccHHHHHHHHHHHcC
Confidence            45678888999999999999877   566677899999887

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.38  E-value=0.16  Score=36.04  Aligned_cols=33  Identities=15%  Similarity=0.206  Sum_probs=27.6

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~   36 (292)
                      .||+|.| .|++|..++..|. ++.+|+++.|.+.
T Consensus         1 ~rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~~   33 (167)
T d1xhca1           1 SKVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEPV   33 (167)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSSS
T ss_pred             CeEEEEC-CcHHHHHHHHHHH-cCCCEEEEecccc
Confidence            4899999 5999999999885 5789999987643

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.24  E-value=0.2  Score=43.06  Aligned_cols=101  Identities=11%  Similarity=0.081  Sum_probs=60.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCC------------C--CcchhhHhh-h--hcCC--cEEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTAS------------D--PVKGKLIEI-F--KNLG--VNVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------------~--~~~~~~~~~-~--~~~~--v~~v~~D~   61 (292)
                      .+|+|.|+ |.+|..+++.|...|. ++++++.+.-..            +  ..|.+.... +  .++.  ++.+..++
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~~  104 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESP  104 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSCH
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCCc
Confidence            47999996 6799999999999995 677776542110            0  112221111 1  1233  44454443


Q ss_pred             CCH-HHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceee
Q 039623           62 QDH-ESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFL  106 (292)
Q Consensus        62 ~d~-~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i  106 (292)
                      .+. +.-.+.+.++|+||.+...  ......+.+.|++++ ++.+.
T Consensus       105 ~~~~~~~~~~~~~~dvVv~~~~~--~~~~~~l~~~c~~~~-ip~i~  147 (529)
T d1yova1         105 ENLLDNDPSFFCRFTVVVATQLP--ESTSLRLADVLWNSQ-IPLLI  147 (529)
T ss_dssp             HHHHHSCGGGGGGCSEEEEESCC--HHHHHHHHHHHHHHT-CCEEE
T ss_pred             hhhhhhHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC-CCEEE
Confidence            221 1112346689999976542  456677889999988 76554

>d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Biotin carboxylase (BC), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.16  E-value=1.5  Score=28.87  Aligned_cols=91  Identities=19%  Similarity=0.206  Sum_probs=55.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC----CCCCHHHHHHHHc--cCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG----DLQDHESLIKAIK--QVD   75 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~----D~~d~~~~~~~~~--~~d   75 (292)
                      +||||.. .|-|...+++.+.+.|.+..++.-.     .++........+..+..-.+    .+.|.+.+.++.+  ++|
T Consensus         3 ~kvLIAN-RGeiA~Ri~ra~~elgi~tvavys~-----~D~~~~h~~~ade~v~lg~~~~~~sYl~~~~Ii~~A~~~~~d   76 (114)
T d2j9ga2           3 DKIVIAN-RGEIALRILRACKELGIKTVAVHSS-----ADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAV   76 (114)
T ss_dssp             SEEEECC-CHHHHHHHHHHHHHHTCEEEEEEEG-----GGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCS
T ss_pred             ceeeEec-CCHHHHHHHHHHHHhCCceEEEecc-----ccccccceecCCceeecCCCchhhhhcCHHHHHHHHHHhCCc
Confidence            6899988 8999999999999999876666544     22211111111111111111    3556777766665  688


Q ss_pred             EEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           76 VVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        76 ~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      +|.-  |+........+.++|.++|
T Consensus        77 AiHP--GyGFLSEn~~Fa~~~~~ag   99 (114)
T d2j9ga2          77 AIHP--GYGFLSENANFAEQVERSG   99 (114)
T ss_dssp             EEEC--CSSTTTTCHHHHHHHHHTT
T ss_pred             eeec--chhhhhhhHHHHHHHHHCC
Confidence            7763  3333455666777777777

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.09  E-value=0.9  Score=34.72  Aligned_cols=31  Identities=13%  Similarity=0.162  Sum_probs=28.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEec
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVR   33 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   33 (292)
                      ++|+|-| .|.+|+++++.|.+.|.+|++++-
T Consensus        37 ~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            5799999 799999999999999999998864

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=88.92  E-value=1.2  Score=36.43  Aligned_cols=106  Identities=11%  Similarity=0.137  Sum_probs=65.0

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcc-hhhHhhhhcCCcEEEECCCCCH---HHHHHHHccCCEEE
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVK-GKLIEIFKNLGVNVLYGDLQDH---ESLIKAIKQVDVVI   78 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~~~d~vi   78 (292)
                      ||+=++ +..-|....+.|.+.|.+|+=+-+..... .-+ ........+.|-+.+..|+.++   +.+.++++.+|++|
T Consensus        13 rVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd-~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~aDv~i   90 (402)
T d1xk7a1          13 RVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWAD-TIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFI   90 (402)
T ss_dssp             EEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCC-GGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTCSEEE
T ss_pred             EEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCC-ccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhcCCce
Confidence            344344 34457777788888999999887543111 111 1112233466788999999986   45677788999999


Q ss_pred             EcCcCCCchhHHHHHHHHHHhCCcceeec---cCCCC
Q 039623           79 STVSRGQIPEQAKIIAAVKEAGNVKRFLP---SEFGN  112 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~~~~~~~i~---s~~g~  112 (292)
                      ++-.+......--=.+.+++.+  +++|+   |.||.
T Consensus        91 ~n~rpg~~~~lGl~~~~L~~~n--P~lI~~sisgfG~  125 (402)
T d1xk7a1          91 EASKGPAFARRGITDEVLWQHN--PKLVIAHLSGFGQ  125 (402)
T ss_dssp             EECSSSHHHHTTCCHHHHHHHC--TTCEEEEEESSCS
T ss_pred             eeecccccccccccccchhhcc--ccccceeeecccC
Confidence            9987665222111224445555  55665   66764

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.79  E-value=0.58  Score=34.85  Aligned_cols=34  Identities=12%  Similarity=0.096  Sum_probs=29.4

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC--CCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA--GHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   36 (292)
                      .||+|+| +|--|...+.+|.++  |++|+++.+.+.
T Consensus         2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            5899999 699999999999875  789999988743

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.75  E-value=0.21  Score=38.32  Aligned_cols=34  Identities=29%  Similarity=0.210  Sum_probs=30.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~   36 (292)
                      ++|+|.| .|..|..++..|.+.| ++|.++.|++.
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6899999 5999999999999999 58999988743

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.71  E-value=0.89  Score=33.05  Aligned_cols=23  Identities=30%  Similarity=0.455  Sum_probs=20.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG   25 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g   25 (292)
                      |||.|=| =|-||+.+.+.+++++
T Consensus         3 ikigING-FGRIGR~vlR~~~~~~   25 (190)
T d1k3ta1           3 IKVGING-FGRIGRMVFQALCEDG   25 (190)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             eEEEEEC-CChHHHHHHHHHHHcC
Confidence            6899999 7999999999998764

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.43  E-value=1.2  Score=35.62  Aligned_cols=95  Identities=16%  Similarity=0.126  Sum_probs=57.8

Q ss_pred             CcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCH---HHHHHHHccCCEEEEcCcCCCch
Q 039623           11 GYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDH---ESLIKAIKQVDVVISTVSRGQIP   87 (292)
Q Consensus        11 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~~~d~vi~~a~~~~~~   87 (292)
                      ..-|....+.|.+.|.+|+=+-+..... ...    ....+.|=+.+..|+.++   +.+.++++++|+||++-.+....
T Consensus        15 ~~agp~~~~~lad~GA~VikvE~p~~~~-~~~----~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i~n~~pg~~~   89 (359)
T d1x74a1          15 IGPGPHAAMILGDLGADVVRIDRPSSVD-GIS----RDAMLRNRRIVTADLKSDQGLELALKLIAKADVLIEGYRPGVTE   89 (359)
T ss_dssp             STHHHHHHHHHHHTTCEEEEEECC------CC----CCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEEECSCTTHHH
T ss_pred             chHHHHHHHHHHHhCCEEEEECCCCCCC-chh----hhhhhCCCeEEEEeCcCHHHHHHHHHHHhhCCEEEecCCCCchh
Confidence            4446666677778899999886542211 111    112356778899999976   55677788999999998766522


Q ss_pred             hHHHHHHHHHHhCCcceeec---cCCCC
Q 039623           88 EQAKIIAAVKEAGNVKRFLP---SEFGN  112 (292)
Q Consensus        88 ~~~~l~~a~~~~~~~~~~i~---s~~g~  112 (292)
                      ..--=.+.+++.+  +++|+   |.||.
T Consensus        90 ~lgl~~~~l~~~n--P~lI~~sisgfG~  115 (359)
T d1x74a1          90 RLGLGPEECAKVN--DRLIYARMTGWGQ  115 (359)
T ss_dssp             HHTCSHHHHHHHC--TTCEEEEEESSCS
T ss_pred             hcCCCHHHHHhhc--CCceEEEEeCCCC
Confidence            2222234445555  55555   45553

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.20  E-value=0.47  Score=33.26  Aligned_cols=33  Identities=18%  Similarity=0.439  Sum_probs=28.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCC-CEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGH-PTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   35 (292)
                      ++|+|+| .|.+|.-.+..+++.|. .|+.+.|..
T Consensus        46 ~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          46 GAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4799999 59999999999999986 577887764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=87.90  E-value=0.22  Score=37.69  Aligned_cols=32  Identities=19%  Similarity=0.308  Sum_probs=28.8

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRES   35 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~   35 (292)
                      +|+|+| +|..|...+..|.++|+ +|+++.+++
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            799999 69999999999999995 799998863

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.45  E-value=0.22  Score=39.31  Aligned_cols=32  Identities=22%  Similarity=0.234  Sum_probs=28.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      .||+|+| +|.-|-..+..|.++|++|.++-++
T Consensus         6 ~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           6 GKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            4699999 6999999999999999999999664

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=87.09  E-value=0.31  Score=37.54  Aligned_cols=35  Identities=23%  Similarity=0.290  Sum_probs=28.9

Q ss_pred             CceEEEEccCCcchHHH-----HHHHHhCCCCEEEEecCCC
Q 039623            1 MAATLIIGGTGYIGKKI-----LEASVKAGHPTFALVREST   36 (292)
Q Consensus         1 m~~vlItGatG~iG~~l-----~~~L~~~g~~V~~~~r~~~   36 (292)
                      |++|+|+| -|.+|...     +..|.+.|++|.+++.++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            88999998 88888754     4577778999999999853

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.96  E-value=0.59  Score=35.20  Aligned_cols=130  Identities=14%  Similarity=0.137  Sum_probs=71.1

Q ss_pred             ceEEEEcc-CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGG-TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++||=+|+ ||+.-.++++. . .+-.|++++.+     +.-.+.+...  ...++..+.+|..++..+......+|.++
T Consensus        76 ~~VLDlGcGsG~~~~~la~~-~-~~g~V~aVDiS-----~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~  148 (230)
T d1g8sa_          76 SKILYLGASAGTTPSHVADI-A-DKGIVYAIEYA-----PRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY  148 (230)
T ss_dssp             CEEEEESCCSSHHHHHHHHH-T-TTSEEEEEESC-----HHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred             CEEEEeCEEcCHHHHHHHHh-C-CCCEEEEEeCc-----HHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEee
Confidence            36777774 56666666663 2 23489999998     5544443333  34678999999999887655555667777


Q ss_pred             EcCcCCCchhHHHHHHHHHHh-CCcceeeccCCCCCCccCCccCCCCcchHHHHHHHHHHHHHcCccEEE
Q 039623           79 STVSRGQIPEQAKIIAAVKEA-GNVKRFLPSEFGNDVDRSQNVVEPAKSAYADKIKIRRAIEAEGIQYTY  147 (292)
Q Consensus        79 ~~a~~~~~~~~~~l~~a~~~~-~~~~~~i~s~~g~~~~~~~~~~~~~~~~~~~K~~~e~~~~~~~~~~~~  147 (292)
                      +.....  .....+++.+... .+-.+++.+......+.       ..+........++.+++.|++..-
T Consensus       149 ~~~~~~--~~~~~~l~~~~r~LKpgG~~~i~~k~~~~d~-------~~~~~~~~~e~~~~L~~aGF~ive  209 (230)
T d1g8sa_         149 EDVAQP--NQAEILIKNAKWFLKKGGYGMIAIKARSIDV-------TKDPKEIFKEQKEILEAGGFKIVD  209 (230)
T ss_dssp             ECCCST--THHHHHHHHHHHHEEEEEEEEEEEEGGGTCS-------SSCHHHHHHHHHHHHHHHTEEEEE
T ss_pred             ccccch--HHHHHHHHHHHHhcccCceEEEEeeccccCC-------CCCHHHHHHHHHHHHHHcCCEEEE
Confidence            655543  3344444444432 10123333221111110       112223445566777777876433

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=86.94  E-value=0.47  Score=35.22  Aligned_cols=73  Identities=16%  Similarity=0.142  Sum_probs=48.5

Q ss_pred             CceEEEEccCCcchHHHHHHHHhCC------CCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccC
Q 039623            1 MAATLIIGGTGYIGKKILEASVKAG------HPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQV   74 (292)
Q Consensus         1 m~~vlItGatG~iG~~l~~~L~~~g------~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~   74 (292)
                      ||+|.|+| -|-.|++=+..|.+.|      .+|++--|..+.+ -+|.      ...+.+.....+.   ++.++.+.+
T Consensus        44 ~KkIaViG-YGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S-~~kA------~~dGf~v~~~~v~---~v~EAv~~A  112 (226)
T d1qmga2          44 IKQIGVIG-WGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNS-FAEA------RAAGFSEENGTLG---DMWETISGS  112 (226)
T ss_dssp             CSEEEEEC-CSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSC-HHHH------HHTTCCGGGTCEE---EHHHHHHTC
T ss_pred             CCEEEEEE-eccHHHHHHHhChhhcccccCCceEEEEeCCCChh-HHHH------HHcCCccCCCccc---CHHHHHhhC
Confidence            57899999 8999999999999955      5577666765543 2222      2334432222222   245677889


Q ss_pred             CEEEEcCcCC
Q 039623           75 DVVISTVSRG   84 (292)
Q Consensus        75 d~vi~~a~~~   84 (292)
                      |+|..+.+..
T Consensus       113 DiVmiLlPDe  122 (226)
T d1qmga2         113 DLVLLLISDS  122 (226)
T ss_dssp             SEEEECSCHH
T ss_pred             CEEEEecchH
Confidence            9999988743

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=86.92  E-value=0.29  Score=40.16  Aligned_cols=33  Identities=24%  Similarity=0.363  Sum_probs=26.2

Q ss_pred             ceEEEEcc------CCcch---HHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGG------TGYIG---KKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGa------tG~iG---~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ||||+++.      +|.+|   ..|+++|.+.||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            78999775      46666   56788999999999998744

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=86.91  E-value=0.28  Score=39.60  Aligned_cols=30  Identities=30%  Similarity=0.296  Sum_probs=28.2

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+|+| +|+-|..++..|.++|++|.++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78999 7999999999999999999999874

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.83  E-value=0.28  Score=33.72  Aligned_cols=34  Identities=26%  Similarity=0.404  Sum_probs=28.1

Q ss_pred             ceEEEEccCCcchHHHHHHHH----hCCCCEEEEecCCC
Q 039623            2 AATLIIGGTGYIGKKILEASV----KAGHPTFALVREST   36 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~----~~g~~V~~~~r~~~   36 (292)
                      ++++|.| .|++|..++..|.    +.|.+|+.+.+.+.
T Consensus        38 k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          38 KSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            4799999 5999999998885    35899999988654

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.56  E-value=0.39  Score=30.32  Aligned_cols=32  Identities=22%  Similarity=0.103  Sum_probs=27.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |||||.| +|.=-.+++..|.+..+++++.--+
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence            8999999 6777889999999988888877444

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.27  E-value=0.36  Score=38.04  Aligned_cols=32  Identities=19%  Similarity=0.354  Sum_probs=29.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      .|+|+| .|..|...+..|.+.|.+|.++.+.+
T Consensus         9 dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVG-AGFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            589999 59999999999999999999998873

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=85.99  E-value=0.34  Score=35.75  Aligned_cols=30  Identities=30%  Similarity=0.395  Sum_probs=24.4

Q ss_pred             ceEEEEccCC-cchH-----HHHHHHHhCCCCEEEEe
Q 039623            2 AATLIIGGTG-YIGK-----KILEASVKAGHPTFALV   32 (292)
Q Consensus         2 ~~vlItGatG-~iG~-----~l~~~L~~~g~~V~~~~   32 (292)
                      |+++|+| || .+|.     +|+..|.++|++|.+++
T Consensus         2 ~~~~i~g-t~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTG-TDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            6899999 55 7886     56677888899999885

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.84  E-value=1.2  Score=33.52  Aligned_cols=32  Identities=19%  Similarity=0.214  Sum_probs=27.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-CCCEEEEecC
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-GHPTFALVRE   34 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~   34 (292)
                      ++|+|-| -|.+|+++++.|.++ |..|++++-.
T Consensus        33 ~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          33 KTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            5799999 699999999999865 8998887654

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.72  E-value=0.37  Score=38.17  Aligned_cols=31  Identities=16%  Similarity=0.263  Sum_probs=28.5

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      |+|+| +|.-|...+..|.++|++|+++.+++
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            79999 69999999999999999999998753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=85.45  E-value=0.36  Score=36.61  Aligned_cols=85  Identities=15%  Similarity=0.130  Sum_probs=51.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhh---hhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEI---FKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++||=+| +| .|+ ++..|.+.|.+|++++.+     ++-.+..+.   ....+++++.+|+.+.+    .-+.+|+|+
T Consensus        39 ~~vLDiG-CG-~G~-~~~~l~~~g~~v~GvD~S-----~~ml~~A~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~i~  106 (246)
T d1y8ca_          39 DDYLDLA-CG-TGN-LTENLCPKFKNTWAVDLS-----QEMLSEAENKFRSQGLKPRLACQDISNLN----INRKFDLIT  106 (246)
T ss_dssp             TEEEEET-CT-TST-THHHHGGGSSEEEEECSC-----HHHHHHHHHHHHHTTCCCEEECCCGGGCC----CSCCEEEEE
T ss_pred             CeEEEEe-Cc-CCH-HHHHHHHhCCccEeeccc-----hhhhhhccccccccCccceeeccchhhhc----ccccccccc
Confidence            3678788 44 454 455677889999999887     443322221   12447999999987643    123689999


Q ss_pred             EcCcCCC----chhHHHHHHHHHH
Q 039623           79 STVSRGQ----IPEQAKIIAAVKE   98 (292)
Q Consensus        79 ~~a~~~~----~~~~~~l~~a~~~   98 (292)
                      .+.+...    ......+++.+.+
T Consensus       107 ~~~~~~~~~~~~~~~~~~l~~~~~  130 (246)
T d1y8ca_         107 CCLDSTNYIIDSDDLKKYFKAVSN  130 (246)
T ss_dssp             ECTTGGGGCCSHHHHHHHHHHHHT
T ss_pred             eeeeeeeccCCHHHHHHHHHHHHH
Confidence            7644332    2344445555543

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=84.93  E-value=3.5  Score=29.00  Aligned_cols=97  Identities=19%  Similarity=0.082  Sum_probs=54.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-CCEEEEecCCCCCCCcchhhHhhhh---------cCCc------------EEEEC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-HPTFALVRESTASDPVKGKLIEIFK---------NLGV------------NVLYG   59 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~v------------~~v~~   59 (292)
                      +||.|-| =|-||+.+.+.++++. .+|.++.-..  . ++..   ..+.         +..+            ++-..
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~~--~-~~~~---ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~   74 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLL--D-ADYM---AYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVT   74 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSS--C-HHHH---HHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEE
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCC--C-HHHH---hhhheecCCCCCcCCeEEEeCCEEEECCEEEEEE
Confidence            6899999 7999999999999875 6666665321  1 2221   1111         0111            11111


Q ss_pred             CCCCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           60 DLQDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        60 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      .-.|++.+.=--.++|+||-|.|.+.   +..-++.-.+.| +++++.|.
T Consensus        75 ~~~~p~~i~W~~~gvDiViEcTG~f~---t~~~~~~hl~~g-akkViiSa  120 (166)
T d1gado1          75 AERDPANLKWDEVGVDVVAEATGLFL---TDETARKHITAG-AKKVVMTG  120 (166)
T ss_dssp             CCSSGGGGCHHHHTCSEEEECSSSCC---SHHHHTHHHHTT-CSEEEESS
T ss_pred             eCCChHHCCccccCCCEEEEcccccc---CHHHHHHHhcCC-CceEEeec
Confidence            22244433111127999999999875   222233334557 88888753

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.15  E-value=2.8  Score=28.54  Aligned_cols=89  Identities=13%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             ceEEEE-----ccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCE
Q 039623            2 AATLII-----GGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDV   76 (292)
Q Consensus         2 ~~vlIt-----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~   76 (292)
                      .||+|+     |-|-.+...+.+.|.+.|++|.+..-..                       .|..+...+..-+.++|.
T Consensus         4 ~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~-----------------------~~~~~~~~~~~~l~~~d~   60 (148)
T d1vmea1           4 GKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSD-----------------------EERPAISEILKDIPDSEA   60 (148)
T ss_dssp             TEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECS-----------------------SCCCCHHHHHHHSTTCSE
T ss_pred             CEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEeccc-----------------------ccccchhHhhhhHHHCCE
Confidence            356664     6666777888888888899888775541                       223344455555778899


Q ss_pred             EEEcCcCCC---chhHHHHHHHHHHhC--CcceeeccCCCCC
Q 039623           77 VISTVSRGQ---IPEQAKIIAAVKEAG--NVKRFLPSEFGND  113 (292)
Q Consensus        77 vi~~a~~~~---~~~~~~l~~a~~~~~--~~~~~i~s~~g~~  113 (292)
                      ++...+...   ......+++......  +.+-.++++||..
T Consensus        61 iiigspt~~~~~~~~~~~~l~~~~~~~~~~k~~~~fgs~g~~  102 (148)
T d1vmea1          61 LIFGVSTYEAEIHPLMRFTLLEIIDKANYEKPVLVFGVHGWA  102 (148)
T ss_dssp             EEEEECEETTEECHHHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_pred             eEEEecccCCccCchHHHHHHHHhhcccCCCEEEEEEcCCCc
Confidence            988776544   345556666555443  1334456777643

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.55  E-value=1.5  Score=31.44  Aligned_cols=70  Identities=14%  Similarity=0.189  Sum_probs=49.8

Q ss_pred             CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHH--ccCCEEEEcCcCCC
Q 039623           10 TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAI--KQVDVVISTVSRGQ   85 (292)
Q Consensus        10 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~--~~~d~vi~~a~~~~   85 (292)
                      |-.-|.|. +.+++++-+|++++|+     ++..+..+....+++.++.++..+.+.+....  .++|.|+.-.|...
T Consensus        26 T~G~GGhs-~~iL~~~~~viaiD~D-----~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          26 TLGGAGHA-RGILERGGRVIGLDQD-----PEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS   97 (182)
T ss_dssp             TCTTSHHH-HHHHHTTCEEEEEESC-----HHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred             CCCCcHHH-HHHhcccCcEEEEhhh-----hhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence            33345564 4556666799999999     66555555556778999999998866654443  36899998888766

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=82.81  E-value=1.9  Score=30.47  Aligned_cols=30  Identities=30%  Similarity=0.411  Sum_probs=26.2

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEec
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVR   33 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r   33 (292)
                      ||.|-| =|-||+.+.+++++.+.+|.++.-
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence            788988 799999999999999888877754

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.57  E-value=0.84  Score=33.82  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=28.9

Q ss_pred             CceEEEEccCCcchH-----HHHHHHHhCCCCEEEEecCC
Q 039623            1 MAATLIIGGTGYIGK-----KILEASVKAGHPTFALVRES   35 (292)
Q Consensus         1 m~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   35 (292)
                      ||.|.|+++-|.+|.     +|+..|.+.|++|.+++-++
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            788999999999998     45566777899999998764

>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Biotin carboxylase (BC), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=82.50  E-value=3.1  Score=27.19  Aligned_cols=89  Identities=22%  Similarity=0.306  Sum_probs=51.7

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEEC-----CCCCHHHHHHHHc--cC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYG-----DLQDHESLIKAIK--QV   74 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~-----D~~d~~~~~~~~~--~~   74 (292)
                      +||||.. -|-|...+++.+.+.|.+..++.-.     .++..  .......-.+..+     .+.|.+.+.++.+  ++
T Consensus         3 kkvLIAN-RGEiA~Ri~ra~~elgi~tvav~s~-----~D~~s--~~~~~ad~~~~ig~~~~~sYln~~~Ii~~A~~~~~   74 (114)
T d1ulza2           3 NKVLVAN-RGEIAVRIIRACKELGIPTVAIYNE-----VESTA--RHVKLADEAYMIGTDPLDTYLNKQRIINLALEVGA   74 (114)
T ss_dssp             SSEEECC-CHHHHHHHHHHHHHHTCCEEEEECG-----GGTTC--HHHHHSSEEEECCSSTTHHHHCHHHHHHHHHHTTC
T ss_pred             ceeeEec-CCHHHHHHHHHHHHhcCCeEEEecc-----hhhcC--cchhhcceeeecCCChhhhhhcHHHHHHHHHHhCC
Confidence            7899998 8999999999999999887766543     11111  1111111111122     1224455555544  57


Q ss_pred             CEEEEcCcCCCchhHHHHHHHHHHhC
Q 039623           75 DVVISTVSRGQIPEQAKIIAAVKEAG  100 (292)
Q Consensus        75 d~vi~~a~~~~~~~~~~l~~a~~~~~  100 (292)
                      |+|.-  |+........++++|.++|
T Consensus        75 daihP--GyGFLSEna~Fa~~~~~~g   98 (114)
T d1ulza2          75 DAIHP--GYGFLAENAEFAKMCEEAG   98 (114)
T ss_dssp             CEEEC--CSSTTTTCHHHHHHHHHTT
T ss_pred             CeEec--chhhhhhHHHHHHHHHHCC
Confidence            77663  3333455666777777776

>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Formyl-CoA transferase
species: Oxalobacter formigenes [TaxId: 847]

Probab=82.46  E-value=3.6  Score=33.54  Aligned_cols=101  Identities=17%  Similarity=0.189  Sum_probs=60.8

Q ss_pred             CCcc-hHHHHHHHHhCCCCEEEEecCCCCC--------CCcchhhHhhhhcCCcEEEECCCCCHH---HHHHHHccCCEE
Q 039623           10 TGYI-GKKILEASVKAGHPTFALVRESTAS--------DPVKGKLIEIFKNLGVNVLYGDLQDHE---SLIKAIKQVDVV   77 (292)
Q Consensus        10 tG~i-G~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~v~~v~~D~~d~~---~~~~~~~~~d~v   77 (292)
                      +.++ |-...+.|.+-|.+|+=+-+.....        .+......-...+.|=+.+..|+.+++   .+.++++.+|+|
T Consensus        13 ~~~~agp~~~~~LadlGAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~~~Lv~~aDv~   92 (427)
T d2vjma1          13 THVQAGPACTQMMGFLGANVIKIERRGSGDMTRGWLQDKPNVDSLYFTMFNCNKRSIELDMKTPEGKELLEQMIKKADVM   92 (427)
T ss_dssp             CCTTHHHHHHHHHHHTTCEEEEEECTTTCSGGGGSSCSSTTSCCHHHHTTCSSCEEEECCTTSHHHHHHHHHHHHHCSEE
T ss_pred             CChhHHHHHHHHHHHhCCeEEEECCCCCCCcccccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHHHHHHHhCCee
Confidence            3444 6666777888899999987642110        000001111223567789999999875   577788899999


Q ss_pred             EEcCcCCCchhHHHHHHHHHHhCCcceeec---cCCCC
Q 039623           78 ISTVSRGQIPEQAKIIAAVKEAGNVKRFLP---SEFGN  112 (292)
Q Consensus        78 i~~a~~~~~~~~~~l~~a~~~~~~~~~~i~---s~~g~  112 (292)
                      |++-.+......--=.+.+++.+  +++|+   |.||.
T Consensus        93 i~n~~pg~~~rlGL~~~~l~~~N--P~LI~~sisgfG~  128 (427)
T d2vjma1          93 VENFGPGALDRMGFTWEYIQELN--PRVILASVKGYAE  128 (427)
T ss_dssp             EECCSTTHHHHTTCCHHHHHHHC--TTCEEEEEESSCT
T ss_pred             eECCCcchHHHcCCCchhhhhhC--Cccceeeeecccc
Confidence            99987654222222234445555  56665   55654

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=82.27  E-value=4.9  Score=32.57  Aligned_cols=104  Identities=15%  Similarity=0.197  Sum_probs=59.1

Q ss_pred             EEccCCc-chHHHHHHHHhCCCCEEEEecCCCCCCCcc---------hhhHhhhhcCCcEEEECCCCCH---HHHHHHHc
Q 039623            6 IIGGTGY-IGKKILEASVKAGHPTFALVRESTASDPVK---------GKLIEIFKNLGVNVLYGDLQDH---ESLIKAIK   72 (292)
Q Consensus         6 ItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~v~~v~~D~~d~---~~~~~~~~   72 (292)
                      |+=-+.+ -|-...+.|.+-|.+|+=+-+..... +.+         ....-...+.|=+.+..|+.++   +.+.++++
T Consensus        10 Vld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd-~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~~~Li~   88 (417)
T d1q7ea_          10 VLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGD-VTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIR   88 (417)
T ss_dssp             EEECCCTTHHHHHHHHHHHTTCEEEEEECTTTCC-GGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHHHHHHHH
T ss_pred             EEEcCChhHHHHHHHHHHHhCCeEEEECCCCCCC-chhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHHHHHHh
Confidence            3333444 45666677778899999887532110 111         0111112356778999999986   45667888


Q ss_pred             cCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeec---cCCCC
Q 039623           73 QVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLP---SEFGN  112 (292)
Q Consensus        73 ~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~---s~~g~  112 (292)
                      .+|+||++-.+......--=.+..++.+  +++|+   |.||.
T Consensus        89 ~aDv~i~n~~pg~~~rlGl~~~~l~~~n--P~lI~~sisgfG~  129 (417)
T d1q7ea_          89 EADILVENFHPGAIDHMGFTWEHIQEIN--PRLIFGSIKGFDE  129 (417)
T ss_dssp             HCSEEEECCCC-------CCHHHHHHHC--TTCEEEEEESSCT
T ss_pred             cCcccEeccCCCcHhhcCCCHHHHHhhC--CCEEEEeeecccc
Confidence            9999999987665222222233445555  56665   55664

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.11  E-value=1.8  Score=32.31  Aligned_cols=85  Identities=20%  Similarity=0.182  Sum_probs=50.9

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh---hcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF---KNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      ++||=.| +| .|..+. .|.+.|++|++++.+     ++-.+..+..   .+.+++++.+|+.+..    .-+.+|.|+
T Consensus        43 ~~iLDiG-cG-tG~~~~-~l~~~~~~v~gvD~s-----~~mi~~a~~~~~~~~~~i~~~~~d~~~l~----~~~~fD~I~  110 (251)
T d1wzna1          43 RRVLDLA-CG-TGIPTL-ELAERGYEVVGLDLH-----EEMLRVARRKAKERNLKIEFLQGDVLEIA----FKNEFDAVT  110 (251)
T ss_dssp             CEEEEET-CT-TCHHHH-HHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCCEEEESCGGGCC----CCSCEEEEE
T ss_pred             CEEEEeC-CC-CCccch-hhcccceEEEEEeec-----cccccccccccccccccchheehhhhhcc----cccccchHh
Confidence            3588888 45 366544 577889999999887     4333222221   2347999999987642    113589888


Q ss_pred             EcCcCCC---chhHHHHHHHHHH
Q 039623           79 STVSRGQ---IPEQAKIIAAVKE   98 (292)
Q Consensus        79 ~~a~~~~---~~~~~~l~~a~~~   98 (292)
                      ..-+...   ....+.+++.+.+
T Consensus       111 ~~~~~~~~~~~~~~~~~L~~~~~  133 (251)
T d1wzna1         111 MFFSTIMYFDEEDLRKLFSKVAE  133 (251)
T ss_dssp             ECSSGGGGSCHHHHHHHHHHHHH
T ss_pred             hhhhhhhcCChHHHHHHHHHHHH
Confidence            7543322   2333444444443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.07  E-value=0.68  Score=34.78  Aligned_cols=32  Identities=19%  Similarity=0.290  Sum_probs=29.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRES   35 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~   35 (292)
                      .|+|+| .|-.|...+..|.++|++|.++.+++
T Consensus         4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            499999 59999999999999999999999874

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=81.91  E-value=3.7  Score=29.08  Aligned_cols=102  Identities=22%  Similarity=0.224  Sum_probs=53.0

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC--CCEEEEecCCCCCCCcchhhHhhh------hcCCc------------EEEECCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG--HPTFALVRESTASDPVKGKLIEIF------KNLGV------------NVLYGDL   61 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~------~~~~v------------~~v~~D~   61 (292)
                      |||.|=| =|-||+.+++++++.+  .++.++..+... +.+....+-..      .+..+            .+....-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~-~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~   79 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLG-DPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN   79 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSS-CHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCC-ChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEec
Confidence            6899999 7999999999998753  344444444321 12222111000      00011            1111122


Q ss_pred             CCHHHHHHHHccCCEEEEcCcCCCchhHHHHHHHHHHhCCcceeeccC
Q 039623           62 QDHESLIKAIKQVDVVISTVSRGQIPEQAKIIAAVKEAGNVKRFLPSE  109 (292)
Q Consensus        62 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~l~~a~~~~~~~~~~i~s~  109 (292)
                      .|++.+.=.-.++|+|+-|.|.+.   ++.-++.-.+.| +++++.|.
T Consensus        80 ~~p~~i~W~~~gvDiViEcTG~f~---~~~~a~~hl~~G-akkViiSA  123 (173)
T d1obfo1          80 RNPAQLPWGALKVDVVLECTGFFT---TKEKAGAHIKGG-AKKVIISA  123 (173)
T ss_dssp             SCGGGSCTTTTTCSEEEECSSSCC---SHHHHHHHHHHT-CSEEEESS
T ss_pred             CCHHHCcccccccceEEEeccccc---CHHHHHHHhccC-CcceEEec
Confidence            244433211227999999999765   112222223347 88888653

>d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: LmbE-like
superfamily: LmbE-like
family: LmbE-like
domain: Hypothetical protein TT1542
species: Thermus thermophilus [TaxId: 274]

Probab=81.76  E-value=3.1  Score=30.82  Aligned_cols=33  Identities=18%  Similarity=0.109  Sum_probs=23.2

Q ss_pred             CceEEEEccCC-----cchHHHHHHHHhCCCCEEEEecC
Q 039623            1 MAATLIIGGTG-----YIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         1 m~~vlItGatG-----~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ||+|||++|--     ..|..|++ +.++|++|.++.-+
T Consensus         1 m~~VLvi~aHPDDe~lg~GGtiak-~~~~G~~V~vv~~T   38 (227)
T d1uana_           1 MLDLLVVAPHPDDGELGCGGTLAR-AKAEGLSTGILDLT   38 (227)
T ss_dssp             CEEEEEEESSTTHHHHHHHHHHHH-HHHTTCCEEEEEEE
T ss_pred             CceEEEEEeCCChHHHHHHHHHHH-HHHcCCeEEEEEEe
Confidence            89999998762     24445555 67789988776543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=81.75  E-value=1.4  Score=32.55  Aligned_cols=83  Identities=10%  Similarity=0.046  Sum_probs=53.7

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhhhcCCcEEEECCCCCHHHHHHHHccCCEEEEcCc
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIFKNLGVNVLYGDLQDHESLIKAIKQVDVVISTVS   82 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~~a~   82 (292)
                      +||=+| +| .|..+ +.|.+.|++|++++-+     ++..+..+.....++.++.+|+.+..    .-..+|+|+..--
T Consensus        23 ~VLDiG-cG-~G~~~-~~l~~~g~~v~giD~s-----~~~i~~a~~~~~~~~~~~~~~~~~~~----~~~~fD~I~~~~v   90 (225)
T d2p7ia1          23 NLLELG-SF-KGDFT-SRLQEHFNDITCVEAS-----EEAISHAQGRLKDGITYIHSRFEDAQ----LPRRYDNIVLTHV   90 (225)
T ss_dssp             CEEEES-CT-TSHHH-HHHTTTCSCEEEEESC-----HHHHHHHHHHSCSCEEEEESCGGGCC----CSSCEEEEEEESC
T ss_pred             cEEEEe-CC-CcHHH-HHHHHcCCeEEEEeCc-----HHHhhhhhcccccccccccccccccc----cccccccccccce
Confidence            577777 33 45554 4577789999999987     55555545444668999999987642    1236899886543


Q ss_pred             CCCchhHHHHHHHHH
Q 039623           83 RGQIPEQAKIIAAVK   97 (292)
Q Consensus        83 ~~~~~~~~~l~~a~~   97 (292)
                      ..++.....+++.+.
T Consensus        91 leh~~d~~~~l~~i~  105 (225)
T d2p7ia1          91 LEHIDDPVALLKRIN  105 (225)
T ss_dssp             GGGCSSHHHHHHHHH
T ss_pred             eEecCCHHHHHHHHH
Confidence            333555566555554

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.63  E-value=1.3  Score=35.13  Aligned_cols=71  Identities=17%  Similarity=0.127  Sum_probs=48.1

Q ss_pred             ceEEEEccCCcchHHHHHHHHhC-C-CCEEEEecCCCCCCCcchhhHhh-hhcCCcEEEECCCCCHHHHHHHHccCCEEE
Q 039623            2 AATLIIGGTGYIGKKILEASVKA-G-HPTFALVRESTASDPVKGKLIEI-FKNLGVNVLYGDLQDHESLIKAIKQVDVVI   78 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~-~~~~~v~~v~~D~~d~~~~~~~~~~~d~vi   78 (292)
                      +++.|+| +|.++++-++.|+.. . .+|++.+|+     +++.+.+.. +...++.... +  .    .+++.++|+|+
T Consensus       126 ~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~-----~e~~~~~~~~~~~~~~~~~~-~--~----~~a~~~aDiV~  192 (320)
T d1omoa_         126 SVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVR-----EKAAKKFVSYCEDRGISASV-Q--P----AEEASRCDVLV  192 (320)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSS-----HHHHHHHHHHHHHTTCCEEE-C--C----HHHHTSSSEEE
T ss_pred             cEEEEec-CcccHHHHHHHHHHHhhhhhcccccCC-----HHHHHHHHHHHHhcCCcccc-c--h----hhhhccccEEE
Confidence            4688998 899999999988774 4 579999998     666654433 3344444432 2  1    24567899998


Q ss_pred             EcCcCCC
Q 039623           79 STVSRGQ   85 (292)
Q Consensus        79 ~~a~~~~   85 (292)
                      .+.....
T Consensus       193 taT~s~~  199 (320)
T d1omoa_         193 TTTPSRK  199 (320)
T ss_dssp             ECCCCSS
T ss_pred             EeccCcc
Confidence            8766443

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=81.43  E-value=0.6  Score=37.55  Aligned_cols=30  Identities=33%  Similarity=0.436  Sum_probs=27.7

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+|+| +|+-|..++..|.++|++|.++-+-
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            78999 7999999999999999999999874

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=81.39  E-value=3.3  Score=27.23  Aligned_cols=32  Identities=22%  Similarity=0.150  Sum_probs=28.4

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      ||+|-|-||..|+.-++++++-|-+|.+=...
T Consensus         8 rVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtP   39 (119)
T d2nu7a1           8 KVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP   39 (119)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred             cEEEEcCCCcHHHHHHHHHHHhCCceEEEEcc
Confidence            79999999999999999999999988766553

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=81.23  E-value=2.3  Score=30.89  Aligned_cols=81  Identities=17%  Similarity=0.173  Sum_probs=45.5

Q ss_pred             EEEEccCCcchHH-HHHHHH---hCC-----CCEEEEecCCCCCCCcchhhH-------------hhhhcCCcEEEECCC
Q 039623            4 TLIIGGTGYIGKK-ILEASV---KAG-----HPTFALVRESTASDPVKGKLI-------------EIFKNLGVNVLYGDL   61 (292)
Q Consensus         4 vlItGatG~iG~~-l~~~L~---~~g-----~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~v~~v~~D~   61 (292)
                      ++|+||||-+.+. |...|-   ..|     +.|++++|+.-.. .+-.+.+             ....-..+.++.+|+
T Consensus         8 lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~-e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~   86 (195)
T d1h9aa1           8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALND-DEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDV   86 (195)
T ss_dssp             EEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCH-HHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCT
T ss_pred             EEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcH-HHHHHHHHHHHhhccchHhhHHHHhhccceeeEee
Confidence            4578999999873 223332   233     5689999974321 1101110             011235688899999


Q ss_pred             CCHHHHHH---HHc--------cCCEEEEcCcCCC
Q 039623           62 QDHESLIK---AIK--------QVDVVISTVSRGQ   85 (292)
Q Consensus        62 ~d~~~~~~---~~~--------~~d~vi~~a~~~~   85 (292)
                      .+++++.+   .+.        +...|+.+|-++.
T Consensus        87 ~~~~~~~~l~~~l~~~~~~~~~~~~rifYLAvpP~  121 (195)
T d1h9aa1          87 TDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPR  121 (195)
T ss_dssp             TCTTTHHHHHHHHHHHHHHHTCCSCEEEEECSCGG
T ss_pred             ccHhhHHHHHHHHHHHHhhcCCCcceEEEEecCHH
Confidence            87654433   221        2457888876654

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.06  E-value=1.4  Score=32.47  Aligned_cols=33  Identities=18%  Similarity=0.016  Sum_probs=28.8

Q ss_pred             ceEEEEccCCcchHHHHHHHHhCC-------CCEEEEecCC
Q 039623            2 AATLIIGGTGYIGKKILEASVKAG-------HPTFALVRES   35 (292)
Q Consensus         2 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~   35 (292)
                      .||+|.| +|--|-..+.+|.++|       ++|+++.+.+
T Consensus         3 ~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            3899999 7999999999999987       4799998874

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.04  E-value=0.94  Score=33.42  Aligned_cols=75  Identities=12%  Similarity=0.150  Sum_probs=50.5

Q ss_pred             eEEEEcc-CCcchHHHHHHHHhCCCCEEEEecCCCCCCCcchhhHhhh--hcCCcEEEECCCCCHHHHHHHHccCCEEEE
Q 039623            3 ATLIIGG-TGYIGKKILEASVKAGHPTFALVRESTASDPVKGKLIEIF--KNLGVNVLYGDLQDHESLIKAIKQVDVVIS   79 (292)
Q Consensus         3 ~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~d~~~~~~~~~~~d~vi~   79 (292)
                      +||=+|+ ||..-.++++.. ..| +|++++.+     ++..+.+...  ...++.++.+|..++......+..+|+|++
T Consensus        59 ~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis-----~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~  131 (209)
T d1nt2a_          59 RVLYLGAASGTTVSHLADIV-DEG-IIYAVEYS-----AKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ  131 (209)
T ss_dssp             EEEEETCTTSHHHHHHHHHT-TTS-EEEEECCC-----HHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred             EEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCC-----HHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEe
Confidence            5666774 455445554433 344 89999988     5555444332  246899999999998877767778888888


Q ss_pred             cCcCC
Q 039623           80 TVSRG   84 (292)
Q Consensus        80 ~a~~~   84 (292)
                      .....
T Consensus       132 ~~~~~  136 (209)
T d1nt2a_         132 DIAQK  136 (209)
T ss_dssp             CCCST
T ss_pred             cccCh
Confidence            65544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.02  E-value=0.53  Score=36.87  Aligned_cols=29  Identities=31%  Similarity=0.328  Sum_probs=25.4

Q ss_pred             cCCcchHHHHHHHHhCCCCEEEEecCCCC
Q 039623            9 GTGYIGKKILEASVKAGHPTFALVRESTA   37 (292)
Q Consensus         9 atG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (292)
                      +||..|.+|+++++.+|++|+.+.+..+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s~   72 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARSA   72 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence            35999999999999999999999887543

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.65  E-value=8.4  Score=30.12  Aligned_cols=72  Identities=17%  Similarity=0.287  Sum_probs=47.3

Q ss_pred             eEEEEccCCcchHHHHHHHHhCCC-CEEEEecCCCCCCCcchhhHhh-------------hhcCCcEEEECCCCCHHHHH
Q 039623            3 ATLIIGGTGYIGKKILEASVKAGH-PTFALVRESTASDPVKGKLIEI-------------FKNLGVNVLYGDLQDHESLI   68 (292)
Q Consensus         3 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~v~~v~~D~~d~~~~~   68 (292)
                      +|+=+| +| .|..+.......|. ++++++.+     ++..+..+.             ....+++++.+|+.+.. +.
T Consensus       154 ~vlD~G-cG-~G~~~~~~a~~~~~~~~~Gid~s-----~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~-~~  225 (328)
T d1nw3a_         154 LFVDLG-SG-VGQVVLQVAAATNCKHHYGVEKA-----DIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE-WR  225 (328)
T ss_dssp             EEEEET-CT-TSHHHHHHHHHCCCSEEEEEECS-----HHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHH-HH
T ss_pred             EEEEcC-CC-CCHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccccc-cc
Confidence            466677 55 78777776666665 69999987     332221111             12457999999999876 45


Q ss_pred             HHHccCCEEEEcCc
Q 039623           69 KAIKQVDVVISTVS   82 (292)
Q Consensus        69 ~~~~~~d~vi~~a~   82 (292)
                      +.+.++|+|+.+.-
T Consensus       226 ~~~~~advi~~~~~  239 (328)
T d1nw3a_         226 ERIANTSVIFVNNF  239 (328)
T ss_dssp             HHHHHCSEEEECCT
T ss_pred             cccCcceEEEEcce
Confidence            55557888885433

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=80.06  E-value=0.65  Score=37.15  Aligned_cols=30  Identities=27%  Similarity=0.293  Sum_probs=28.0

Q ss_pred             EEEEccCCcchHHHHHHHHhCCCCEEEEecC
Q 039623            4 TLIIGGTGYIGKKILEASVKAGHPTFALVRE   34 (292)
Q Consensus         4 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (292)
                      |+|.| +|.-|.-++..|.++|++|.++-+-
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence            89999 7999999999999999999999764