Citrus Sinensis ID: 039745

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
Protein Sequence
GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSHQHLSFH
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHEHHHHEEHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
gkledkidiyDFGLILLEIIVgrplksrkeVDLLKNQLQAVITADEsarrsmvdpavnKACLDESLKTMMEVCVRCLlknpaerpsvEDVLWNLQFAAQVQDAwhsqssegspisppwpshqhlsfh
Flexible Loop (DISEMBL)
gkledkidiydfgLILLEIIVGRPLKSRKEVDLLKNQLQAVItadesarrsmvdpaVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSsegspisppwpshqhlsfh
Low Complexity Region (SEG)
GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSHQHLSFH
Disordered region (IsUnstruct)
*****KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITA********VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW***********************
Disordered Region (DISOPRED)
GKLEDKIDIYDFGLILLEIIVGRPLK*****DLL*NQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF*******************************
Disordered Region (DISEMBL)
GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV***************************
Disordered Region (DISPRO)
****DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSHQHLSFH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	127	2.2.26 [Sep-21-2011]
Q8LFN2	802	Probable inactive leucine	yes	no	0.968	0.153	0.666	1e-44
Q9M9S4	728	Probable LRR receptor-lik	no	no	0.842	0.146	0.407	5e-18
C0LGJ9	742	Probable LRR receptor-lik	no	no	0.818	0.140	0.409	1e-17
Q9SJT0	871	Probable receptor-like pr	no	no	0.905	0.132	0.327	8e-14
O80623	815	Probable receptor-like pr	no	no	0.763	0.119	0.346	3e-12
Q9T020	878	Probable receptor-like pr	no	no	0.889	0.128	0.316	1e-11
Q9SCZ4	895	Receptor-like protein kin	no	no	0.779	0.110	0.349	2e-11
Q9FLW0	824	Probable receptor-like pr	no	no	0.763	0.117	0.351	4e-11
Q9FLJ8	842	Probable receptor-like pr	no	no	0.779	0.117	0.330	6e-11
Q9FN92	829	Probable receptor-like pr	no	no	0.779	0.119	0.311	3e-10

>sp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1

 Score =  178 bits (451), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 102/123 (82%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKAC 61
           K EDKIDIYDFG+ILLE+IVGRPL+++ +VD+LK QLQA I+AD+ ARRSMVDP V++AC
Sbjct: 656 KDEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRAC 715

Query: 62  LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSH 121
            D+SLKTMME+CVRCLLK+P ERPS+EDVLWNLQFA+QVQ+ W   S+  S +  P P+ 
Sbjct: 716 SDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWLQNSNPSSNLGSPSPAA 775

Query: 122 QHL 124
             L
Sbjct: 776 SSL 778

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M9S4|Y1143_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 1/108 (0%)

Query: 5   DKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           +K D+Y FG+IL++II G+ + +   E+  LK QL+  +  + S  RS+ DP V      
Sbjct: 615 EKEDVYQFGVILIQIITGKVIAAASSELGSLKLQLENSLRDEPSVLRSLADPCVRGTYAY 674

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEG 111
           ESL+T +E  + CL ++  +RPS+EDV+WNLQ+  QVQ  W S  + G
Sbjct: 675 ESLRTTVEFAINCLCEDQRKRPSIEDVVWNLQYTIQVQQGWTSSENLG 722

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGJ9|Y2278_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)

Query: 5   DKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           +K D+Y FG+ILL+II G+ + +   E+  LK QL+  +  + S   S+ DP+V  +   
Sbjct: 626 EKEDVYQFGVILLQIITGKVVAAGSSEMGSLKLQLENGLRDEPSVLSSLADPSVKGSYAY 685

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQS 108
           ESL+T +E  + CL ++ ++RPS+EDV+WNLQ+  QVQ  W   S
Sbjct: 686 ESLRTTVEFAINCLCEDQSKRPSIEDVVWNLQYTIQVQQGWRPSS 730

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SJT0|Y2214_ARATH Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=3 SV=1

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 7/122 (5%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDPAV 57
           +L DK D+Y FG++LLE +  RP  +    R++V+L +    A++   +     ++DP +
Sbjct: 701 QLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAE---WAMLWKQKGLLEKIIDPHL 757

Query: 58  NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPP 117
             A   ES+K   E   +CL     +RP++ DVLWNL++A Q+Q+A+    +E   +  P
Sbjct: 758 VGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQEAFSQGKAEAEEVETP 817

Query: 118 WP 119
            P
Sbjct: 818 KP 819

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O80623|Y2393_ARATH Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 7/104 (6%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDPAV 57
           +L +K D+Y FG+++LE++ GRP+      R++V+L++  ++ V    +     ++DP +
Sbjct: 665 QLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLV---KKGKLEDIIDPFL 721

Query: 58  NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 101
                 E +K   EV  +CL +N  ERP++ D+LWNL+F  QVQ
Sbjct: 722 VGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLEFMLQVQ 765

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 7/120 (5%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDPAV 57
           +L DK D+Y FG++LLE +  RP  +    R++V+L +  +Q      +     ++DP +
Sbjct: 702 QLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQ---WKRKGLLEKIIDPHL 758

Query: 58  NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPP 117
                 ES+K   E   +CL     +RP++ DVLWNL++A Q+Q+A+    +E +  + P
Sbjct: 759 AGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLEYALQLQEAFTQGKAEETENAKP 818

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 7/106 (6%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSM----VDPAV 57
           +L +K D+Y FG++L E +  RP  +     L K Q+     A    ++ M    VDP +
Sbjct: 714 QLTEKSDVYSFGVVLFEALCARPALNPT---LAKEQVSLAEWAPYCYKKGMLDQIVDPYL 770

Query: 58  NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
                 E  K   E  ++C+L    ERPS+ DVLWNL+FA Q+Q++
Sbjct: 771 KGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQES 816

Receptor-like protein kinase that mediates the female control of male gamete delivery during fertilization, including growth cessation of compatible pollen tubes ensuring a reproductive isolation barriers. Required for cell elongation during vegetative growth, mostly in a brassinosteroids- (BR-) independent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FLW0|Y5241_ARATH Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 11/108 (10%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD--LLKNQLQAVITADESARRSMVDPAVNK 59
           +L DK D+Y FG++L E++  RP      VD  L++ Q+     A E  R+ M+D  V+ 
Sbjct: 666 QLTDKSDVYSFGVVLFEVLCARP-----AVDPLLVREQVNLAEWAIEWQRKGMLDQIVDP 720

Query: 60  ACLDE----SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
              DE    SLK   E   +C      +RP++ DVLWNL+   Q+Q++
Sbjct: 721 NIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLEHVLQLQES 768

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FLJ8|Y5613_ARATH Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSM----VDPAV 57
           +L DK D+Y FG++L E++  RP+ + +   L + Q+     A    R+ M    +DP +
Sbjct: 707 QLTDKSDVYSFGVVLFEVLCARPVINPQ---LPREQVNLAEYAMNLHRKGMLEKIIDPKI 763

Query: 58  NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
                  SL+  +E   +CL +   +RP + DVLWNL++A Q+Q+A
Sbjct: 764 VGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEA 809

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9FN92|Y5597_ARATH Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=1 SV=1

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 7/106 (6%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPL----KSRKEVDLLKNQLQAVITADESARRSMVDPAV 57
           +L +K D+Y FG+++ E++  RP+     +R+ V+L +    A+    +     ++DP++
Sbjct: 659 QLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAE---WAMKWQKKGQLEHIIDPSL 715

Query: 58  NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
                 +SL+   E   +CL     +RPS+ DVLWNL++A Q+Q+A
Sbjct: 716 RGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYALQLQEA 761

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
255569464	782	leucine-rich repeat protein, putative [R	0.960	0.156	0.745	8e-48
357508805	774	hypothetical protein MTR_7g086420 [Medic	0.984	0.161	0.666	3e-43
18396660	802	leucine-rich repeat protein kinase-like	0.968	0.153	0.666	8e-43
6006864	803	hypothetical protein [Arabidopsis thalia	0.968	0.153	0.666	1e-42
225439195	786	PREDICTED: probable inactive leucine-ric	0.976	0.157	0.650	8e-42
147854936	746	hypothetical protein VITISV_020032 [Viti	0.976	0.166	0.650	1e-41
297833056	802	hypothetical protein ARALYDRAFT_477625 [	0.976	0.154	0.636	3e-41
449523778	781	PREDICTED: probable inactive leucine-ric	0.913	0.148	0.669	8e-40
449462762	781	PREDICTED: probable inactive leucine-ric	0.913	0.148	0.669	8e-40
224144836	774	predicted protein [Populus trichocarpa]	0.866	0.142	0.687	9e-39

>gi|255569464|ref|XP_002525699.1| leucine-rich repeat protein, putative [Ricinus communis] gi|223534999|gb|EEF36682.1| leucine-rich repeat protein, putative [Ricinus communis]

 Score =  194 bits (494), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 91/122 (74%), Positives = 104/122 (85%)

Query: 4   EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           E+K+D+YDFG+ILLEIIVG PL S  EVD+LK++LQA I +DE+ARRSMVDPAV + C D
Sbjct: 659 EEKVDVYDFGVILLEIIVGSPLNSMNEVDVLKDRLQASIISDEAARRSMVDPAVKRKCSD 718

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSHQH 123
           +SLKTMMEVCVRCLLKNPA+RPSVEDVLWNLQFAAQVQD W   SSEGSPISP  P   H
Sbjct: 719 QSLKTMMEVCVRCLLKNPADRPSVEDVLWNLQFAAQVQDGWRGDSSEGSPISPSNPPDLH 778

Query: 124 LS 125
           L+
Sbjct: 779 LT 780

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357508805|ref|XP_003624691.1| hypothetical protein MTR_7g086420 [Medicago truncatula] gi|87162732|gb|ABD28527.1| Protein kinase [Medicago truncatula] gi|355499706|gb|AES80909.1| hypothetical protein MTR_7g086420 [Medicago truncatula]

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 86/129 (66%), Positives = 103/129 (79%), Gaps = 4/129 (3%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
           GK EDK DIYDFG+ILLEII+GR +K+  + +  K+ LQ  + ADE ARRS+VDPA+ KA
Sbjct: 648 GKHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKDLLQTSLGADEDARRSIVDPAIRKA 707

Query: 61  CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSPISPPW 118
           CL++SLKTM E+CVRC++K PAERPS+EDVLWNLQFAAQVQDAW   SQSSEGSP SP  
Sbjct: 708 CLEQSLKTMTEICVRCMIKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLG 767

Query: 119 PSHQHLSFH 127
           P  Q  +FH
Sbjct: 768 P--QRTAFH 774

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396660|ref|NP_566213.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gi|334185060|ref|NP_001189801.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gi|75155911|sp|Q8LFN2.1|Y3037_ARATH RecName: Full=Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770; Flags: Precursor gi|21536973|gb|AAM61314.1| unknown [Arabidopsis thaliana] gi|224589557|gb|ACN59312.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332640463|gb|AEE73984.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gi|332640464|gb|AEE73985.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana]

 Score =  178 bits (451), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 102/123 (82%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKAC 61
           K EDKIDIYDFG+ILLE+IVGRPL+++ +VD+LK QLQA I+AD+ ARRSMVDP V++AC
Sbjct: 656 KDEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRAC 715

Query: 62  LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSH 121
            D+SLKTMME+CVRCLLK+P ERPS+EDVLWNLQFA+QVQ+ W   S+  S +  P P+ 
Sbjct: 716 SDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWLQNSNPSSNLGSPSPAA 775

Query: 122 QHL 124
             L
Sbjct: 776 SSL 778

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6006864|gb|AAF00640.1|AC009540_17 hypothetical protein [Arabidopsis thaliana]

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 102/123 (82%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKAC 61
           K EDKIDIYDFG+ILLE+IVGRPL+++ +VD+LK QLQA I+AD+ ARRSMVDP V++AC
Sbjct: 656 KDEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRAC 715

Query: 62  LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSH 121
            D+SLKTMME+CVRCLLK+P ERPS+EDVLWNLQFA+QVQ+ W   S+  S +  P P+ 
Sbjct: 716 SDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWLQNSNPSSNLGSPSPAA 775

Query: 122 QHL 124
             L
Sbjct: 776 SSL 778

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439195|ref|XP_002269509.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Vitis vinifera] gi|296085894|emb|CBI31218.3| unnamed protein product [Vitis vinifera]

 Score =  174 bits (442), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/126 (65%), Positives = 102/126 (80%), Gaps = 2/126 (1%)

Query: 4   EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           EDKIDIYDFG+ILLE+I+GRP  S  EVD+++N LQA +TAD+++RR+MVD AV++ C D
Sbjct: 661 EDKIDIYDFGVILLELIMGRPFNSTNEVDVIRNWLQACVTADDASRRNMVDAAVHRTCSD 720

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSPISPPWPSH 121
           ESLKTMME+C+RCL K+PAERPS+EDVLWNLQFAAQV+DA    S SS+GSP  P  P  
Sbjct: 721 ESLKTMMEICIRCLHKDPAERPSIEDVLWNLQFAAQVEDALRGDSDSSDGSPAFPSLPPR 780

Query: 122 QHLSFH 127
             L+ H
Sbjct: 781 LRLNIH 786

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854936|emb|CAN80270.1| hypothetical protein VITISV_020032 [Vitis vinifera]

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 82/126 (65%), Positives = 102/126 (80%), Gaps = 2/126 (1%)

Query: 4   EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           EDKIDIYDFG+ILLE+I+GRP  S  EVD+++N LQA +TAD+++RR+MVD AV++ C D
Sbjct: 621 EDKIDIYDFGVILLELIMGRPFNSTNEVDVIRNWLQACVTADDASRRNMVDAAVHRTCSD 680

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSPISPPWPSH 121
           ESLKTMME+C+RCL K+PAERPS+EDVLWNLQFAAQV+DA    S SS+GSP  P  P  
Sbjct: 681 ESLKTMMEICIRCLHKDPAERPSIEDVLWNLQFAAQVEDALRGDSDSSDGSPAFPSLPPR 740

Query: 122 QHLSFH 127
             L+ H
Sbjct: 741 LRLNIH 746

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833056|ref|XP_002884410.1| hypothetical protein ARALYDRAFT_477625 [Arabidopsis lyrata subsp. lyrata] gi|297330250|gb|EFH60669.1| hypothetical protein ARALYDRAFT_477625 [Arabidopsis lyrata subsp. lyrata]

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 105/132 (79%), Gaps = 8/132 (6%)

Query: 2   KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKAC 61
           K EDKIDIYDFG+ILLE+IVGRPL+++ +VD+LK QLQA I+AD+ ARRSMVDP V++ C
Sbjct: 656 KSEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRDC 715

Query: 62  LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSS----EGSP---- 113
            D+SLKTMME+CVRCLLK+P ERPS+EDV+WNLQFA+QVQ+ W   S+     GSP    
Sbjct: 716 SDQSLKTMMEICVRCLLKDPLERPSIEDVMWNLQFASQVQEGWLQNSNPSSIRGSPSPDA 775

Query: 114 ISPPWPSHQHLS 125
            S P PS  H++
Sbjct: 776 SSLPPPSRLHVT 787

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449523778|ref|XP_004168900.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Cucumis sativus]

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 79/118 (66%), Positives = 97/118 (82%), Gaps = 2/118 (1%)

Query: 4   EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           E + DIYDFG+ILLEII GR LKS+ E+++L+ +LQ  I++D  ARRS+VDP++   CLD
Sbjct: 659 EAQADIYDFGVILLEIIRGRALKSKNEINVLREKLQEAISSDSIARRSIVDPSIQNECLD 718

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW--HSQSSEGSPISPPWP 119
           +SLKTMMEVCVRCLLK+P  RPS+EDVLWNLQFAAQVQDAW    +SS+GSPISP  P
Sbjct: 719 QSLKTMMEVCVRCLLKDPVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQP 776

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462762|ref|XP_004149109.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Cucumis sativus]

 Score =  168 bits (425), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 79/118 (66%), Positives = 97/118 (82%), Gaps = 2/118 (1%)

Query: 4   EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           E + DIYDFG+ILLEII GR LKS+ E+++L+ +LQ  I++D  ARRS+VDP++   CLD
Sbjct: 659 EAQADIYDFGVILLEIIRGRALKSKNEINVLREKLQEAISSDSIARRSIVDPSIQNECLD 718

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW--HSQSSEGSPISPPWP 119
           +SLKTMMEVCVRCLLK+P  RPS+EDVLWNLQFAAQVQDAW    +SS+GSPISP  P
Sbjct: 719 QSLKTMMEVCVRCLLKDPVTRPSLEDVLWNLQFAAQVQDAWCGEYRSSDGSPISPSQP 776

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144836|ref|XP_002325432.1| predicted protein [Populus trichocarpa] gi|222862307|gb|EEE99813.1| predicted protein [Populus trichocarpa]

 Score =  164 bits (416), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 77/112 (68%), Positives = 94/112 (83%), Gaps = 2/112 (1%)

Query: 4   EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           + K+D+YDFGLILLEIIVGR L S+ EV +LK+QLQA IT+D++AR S+VDP V ++C D
Sbjct: 659 DQKVDVYDFGLILLEIIVGRSLTSKNEVRVLKDQLQASITSDDTARSSIVDPVVRRSCSD 718

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH--SQSSEGSP 113
           +SLKTMME+CV CLLKNPA+RPSVED+LWNLQ+AAQVQD W   SQSS   P
Sbjct: 719 QSLKTMMEICVSCLLKNPADRPSVEDILWNLQYAAQVQDPWRGDSQSSSTKP 770

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
TAIR|locus:2079339	802	AT3G03770 [Arabidopsis thalian	0.968	0.153	0.666	1.4e-40
TAIR|locus:2167326	680	AT5G63410 [Arabidopsis thalian	0.763	0.142	0.421	1.6e-14
TAIR|locus:2050080	871	AT2G21480 [Arabidopsis thalian	0.905	0.132	0.327	7.1e-13
TAIR|locus:2039717	815	AT2G39360 [Arabidopsis thalian	0.755	0.117	0.371	7.6e-12
TAIR|locus:2136338	878	AT4G39110 [Arabidopsis thalian	0.889	0.128	0.316	1.3e-10
TAIR|locus:2081895	895	FER "FERONIA" [Arabidopsis tha	0.779	0.110	0.349	2.1e-10
TAIR|locus:2178707	824	AT5G24010 [Arabidopsis thalian	0.937	0.144	0.318	3.1e-10
TAIR|locus:2163158	842	AT5G61350 [Arabidopsis thalian	0.779	0.117	0.320	3.2e-10
UNIPROTKB|Q40234	321	Pto "Pto disease resistance pr	0.787	0.311	0.327	3.3e-10
TAIR|locus:2058636	834	AT2G23200 [Arabidopsis thalian	0.763	0.116	0.326	2.3e-09

TAIR|locus:2079339 AT3G03770 [Arabidopsis thaliana (taxid:3702)]

 Score = 439 (159.6 bits), Expect = 1.4e-40, P = 1.4e-40
 Identities = 82/123 (66%), Positives = 102/123 (82%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKAC 61
             K EDKIDIYDFG+ILLE+IVGRPL+++ +VD+LK QLQA I+AD+ ARRSMVDP V++AC
Sbjct:   656 KDEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQLQASISADDGARRSMVDPTVHRAC 715

Query:    62 LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPSH 121
              D+SLKTMME+CVRCLLK+P ERPS+EDVLWNLQFA+QVQ+ W   S+  S +  P P+ 
Sbjct:   716 SDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWLQNSNPSSNLGSPSPAA 775

Query:   122 QHL 124
               L
Sbjct:   776 SSL 778

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2167326 AT5G63410 [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 43/102 (42%), Positives = 65/102 (63%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKAC 61
             +LED  D+Y FGLILL+ IVG  + +R+E   L+++L ++    E  RR MV+P V   C
Sbjct:   578 RLED--DVYSFGLILLQSIVGPSVSAREEA-FLRDELASL--ESEEGRRRMVNPTVQATC 632

Query:    62 LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
              + SL  ++ +  +C+      RPS ED+LWNLQ+A+Q+Q A
Sbjct:   633 RNGSLIRVITLMNKCVSPESLSRPSFEDILWNLQYASQLQAA 674

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2050080 AT2G21480 [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 40/122 (32%), Positives = 68/122 (55%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDPAV 57
             +L DK D+Y FG++LLE +  RP  +    R++V+L +    A++   +     ++DP +
Sbjct:   701 QLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAE---WAMLWKQKGLLEKIIDPHL 757

Query:    58 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPP 117
               A   ES+K   E   +CL     +RP++ DVLWNL++A Q+Q+A+    +E   +  P
Sbjct:   758 VGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQEAFSQGKAEAEEVETP 817

Query:   118 WP 119
              P
Sbjct:   818 KP 819

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2039717 AT2G39360 [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 7.6e-12, P = 7.6e-12
 Identities = 39/105 (37%), Positives = 66/105 (62%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDP-A 56
             +L +K D+Y FG+++LE++ GRP+      R++V+L++  ++ V    +     ++DP  
Sbjct:   665 QLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLV---KKGKLEDIIDPFL 721

Query:    57 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 101
             V K  L+E +K   EV  +CL +N  ERP++ D+LWNL+F  QVQ
Sbjct:   722 VGKVKLEE-VKKYCEVTEKCLSQNGIERPAMGDLLWNLEFMLQVQ 765

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2136338 AT4G39110 [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 38/120 (31%), Positives = 66/120 (55%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDPAV 57
             +L DK D+Y FG++LLE +  RP  +    R++V+L +  +Q      +     ++DP +
Sbjct:   702 QLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQ---WKRKGLLEKIIDPHL 758

Query:    58 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPP 117
                   ES+K   E   +CL     +RP++ DVLWNL++A Q+Q+A+    +E +  + P
Sbjct:   759 AGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLEYALQLQEAFTQGKAEETENAKP 818

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2081895 FER "FERONIA" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 37/106 (34%), Positives = 56/106 (52%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSM----VDPAV 57
             +L +K D+Y FG++L E +  RP  +     L K Q+     A    ++ M    VDP +
Sbjct:   714 QLTEKSDVYSFGVVLFEALCARPALNPT---LAKEQVSLAEWAPYCYKKGMLDQIVDPYL 770

Query:    58 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
                   E  K   E  ++C+L    ERPS+ DVLWNL+FA Q+Q++
Sbjct:   771 KGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQES 816

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0010483 "pollen tube reception" evidence=IMP

GO:0043680 "filiform apparatus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009791 "post-embryonic development" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0010193 "response to ozone" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2178707 AT5G24010 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 42/132 (31%), Positives = 67/132 (50%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD--LLKNQLQAVITADESARRSMVDPAVNK 59
             +L DK D+Y FG++L E++  RP      VD  L++ Q+     A E  R+ M+D  V+ 
Sbjct:   666 QLTDKSDVYSFGVVLFEVLCARPA-----VDPLLVREQVNLAEWAIEWQRKGMLDQIVDP 720

Query:    60 ACLDE----SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAW--HSQSSEGSP 113
                DE    SLK   E   +C      +RP++ DVLWNL+   Q+Q++   +    +   
Sbjct:   721 NIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLEHVLQLQESGPLNIPEEDYGD 780

Query:   114 ISPPWPSHQHLS 125
             ++ P  + Q LS
Sbjct:   781 VTDPRTARQGLS 792

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2163158 AT5G61350 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 34/106 (32%), Positives = 61/106 (57%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDPAV 57
             +L DK D+Y FG++L E++  RP+ +    R++V+L +    A+    +     ++DP +
Sbjct:   707 QLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAE---YAMNLHRKGMLEKIIDPKI 763

Query:    58 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
                    SL+  +E   +CL +   +RP + DVLWNL++A Q+Q+A
Sbjct:   764 VGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEA 809

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q40234 Pto "Pto disease resistance protein" [Solanum pimpinellifolium (taxid:4084)]

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 35/107 (32%), Positives = 63/107 (58%)

Query:     1 GKLEDKIDIYDFGLILLEIIVGRP--LKS--RKEVDLLKNQLQAVITADESARRSMVDPA 56
             G+L +K D+Y FG++L E++  R   ++S  R+ V+L +    AV + +      +VDP 
Sbjct:   216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPN 272

Query:    57 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
             +      ESL+   +  V+CL  +  +RPS+ DVLW L++A ++Q++
Sbjct:   273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2058636 AT2G23200 [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 34/104 (32%), Positives = 58/104 (55%)

Query:     2 KLEDKIDIYDFGLILLEIIVGRPLKS----RKEVDLLKNQLQAVITADESARRSMVDPAV 57
             KL +K D+Y FG++LLE++  RP        +EV+L +     +    +     ++DP++
Sbjct:   665 KLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSE---WVMFCKSKGTIDEILDPSL 721

Query:    58 NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 101
                    SLK  ME+  +CL +   ERPS+ DV+W+L++  Q+Q
Sbjct:   722 IGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLEYVLQLQ 765

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	127
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-05
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-04

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 40.2 bits (95), Expect = 8e-05
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
            +DI+  G+IL E++ G+P      ++  L    + +            D       +  
Sbjct: 176 AVDIWSLGVILYELLTGKPPFPGDDQLLEL---FKKIGKPKPPFPPPEWD-------ISP 225

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
             K ++    + L+K+P +R + E+ L
Sbjct: 226 EAKDLIR---KLLVKDPEKRLTAEEAL 249

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
           K+D++  G+IL E++ G+P  S + +    +QLQ +       R        ++      
Sbjct: 179 KVDVWSLGVILYELLTGKPPFSGENIL---DQLQLI------RRILGPPLEFDEPKWSSG 229

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
            +   ++  +CL K+P++RP+ E++L
Sbjct: 230 SEEAKDLIKKCLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 38.6 bits (88), Expect = 3e-04
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 3/86 (3%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
             DI+  G+ L E++ G P    ++     +Q   +I    +     +   ++ +  +  
Sbjct: 191 SSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT---PSLASPLSPSNPELI 247

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
            K   ++  + L K+P  R S    L
Sbjct: 248 SKAASDLLKKLLAKDPKNRLSSSSDL 273

Length = 384

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 13/85 (15%)

Query: 8   DIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESL 66
           DI+  GL LLE  +G+ P     +      +L   I            P++         
Sbjct: 182 DIWSLGLTLLECALGKFPFLPPGQPSFF--ELMQAICDGPP-------PSLPAEEFSPEF 232

Query: 67  KTMMEVCVRCLLKNPAERPSVEDVL 91
           +  +     CL K+P +RPS  ++L
Sbjct: 233 RDFIS---ACLQKDPKKRPSAAELL 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	127
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.66
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.64
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.64
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.62
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.61
PHA02988	283	hypothetical protein; Provisional	99.61
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.58
KOG0578	550	consensus p21-activated serine/threonine protein k	99.55
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.55
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.54
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.54
PTZ00284	467	protein kinase; Provisional	99.52
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.52
PTZ00036	440	glycogen synthase kinase; Provisional	99.52
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.51
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.51
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.51
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.51
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.51
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.5
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.5
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.5
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.5
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.5
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.49
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.49
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.48
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.48
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.48
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.47
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.47
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.46
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.45
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.45
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.45
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.45
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.44
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.43
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.43
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.43
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.43
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.43
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.43
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.43
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.43
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.43
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.42
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.42
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.42
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.42
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.42
KOG0198	313	consensus MEKK and related serine/threonine protei	99.42
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.42
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.42
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.41
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.41
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.41
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.41
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.41
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.41
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.41
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.41
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.41
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.41
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.4
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.4
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.4
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.4
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.4
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.4
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.4
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.4
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.4
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.4
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.4
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.39
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.39
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.39
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.39
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.39
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.39
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.39
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.39
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.39
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.39
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.39
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.38
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.38
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.38
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.38
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.38
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.38
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.38
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.38
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.38
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.38
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.38
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.38
PTZ00283	496	serine/threonine protein kinase; Provisional	99.37
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.37
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.37
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.37
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.37
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.37
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.37
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.37
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.37
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.36
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.36
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.36
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.36
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.36
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.36
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.36
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.36
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.36
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.36
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.36
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.36
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.36
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.36
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.36
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.36
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.36
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.36
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.36
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.36
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.35
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.35
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.35
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.35
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.35
PHA03212	391	serine/threonine kinase US3; Provisional	99.35
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.35
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.35
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.35
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.35
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.35
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.35
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.35
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.35
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.35
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.35
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.35
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.35
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.35
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.35
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.35
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.35
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.35
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.34
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.34
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.34
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.34
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.34
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.34
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.34
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.34
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.34
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.34
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.34
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.34
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.34
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.34
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.34
PHA03207	392	serine/threonine kinase US3; Provisional	99.34
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.34
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.34
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.34
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.34
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.34
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.33
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.33
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.33
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.33
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.33
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.33
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.33
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.33
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.33
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.33
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.33
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.33
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.33
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.33
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.33
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.33
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.33
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.33
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.32
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.32
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.32
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.32
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.32
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.32
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.32
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.32
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.32
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.32
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.32
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.32
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.32
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.32
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.32
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.32
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.32
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.32
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.32
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.32
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.32
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.32
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.32
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.31
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.31
PHA02882	294	putative serine/threonine kinase; Provisional	99.31
PTZ00267	478	NIMA-related protein kinase; Provisional	99.31
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.31
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.31
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.31
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.31
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.31
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.31
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.31
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.31
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.3
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.3
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.3
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.3
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.3
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.3
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.3
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.3
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.3
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.3
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.3
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.3
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.3
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.3
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.3
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.3
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.3
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.29
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.29
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.29
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.29
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.29
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.29
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.29
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.29
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.29
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.29
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.29
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.28
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.28
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.28
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.28
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.28
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.28
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.28
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.28
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.28
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.28
PHA03209	357	serine/threonine kinase US3; Provisional	99.28
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.28
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.28
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.28
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.28
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.28
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.28
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.28
PLN00009	294	cyclin-dependent kinase A; Provisional	99.27
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.27
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.27
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.27
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.27
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.26
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.26
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.26
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.26
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.26
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.26
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.26
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.26
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.26
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.26
KOG0610	459	consensus Putative serine/threonine protein kinase	99.25
KOG0605	550	consensus NDR and related serine/threonine kinases	99.25
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.25
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.25
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.25
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.25
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.25
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.25
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.25
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.25
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.24
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.24
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.24
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.24
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.24
PHA03211	461	serine/threonine kinase US3; Provisional	99.24
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.24
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.23
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.23
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.23
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.23
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.23
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.23
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.23
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.22
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.22
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.22
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.22
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.22
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.21
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.21
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.21
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.21
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.21
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.2
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.2
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.2
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.2
KOG0589	426	consensus Serine/threonine protein kinase [General	99.19
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.19
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.19
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.19
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.19
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.18
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.18
PLN00181	793	protein SPA1-RELATED; Provisional	99.18
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.18
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.18
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.18
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.17
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.16
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.16
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.15
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.15
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.15
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.15
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.14
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.14
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.14
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.14
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.13
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.13
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.13
PHA03210	501	serine/threonine kinase US3; Provisional	99.12
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.12
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.12
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.12
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.12
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.11
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.1
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.1
KOG0584	632	consensus Serine/threonine protein kinase [General	99.09
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.08
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.07
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.07
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.07
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.06
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.06
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.06
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.05
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.05
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.05
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.05
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.04
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.04
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.03
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.03
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.99
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.98
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.98
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.98
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.97
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.93
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.92
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.91
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.89
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.87
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.86
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.8
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.78
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.7
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.7
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.6
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.58
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.49
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.48
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.46
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.44
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.39
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.37
KOG0586	596	consensus Serine/threonine protein kinase [General	98.37
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.25
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.24
KOG3653	534	consensus Transforming growth factor beta/activin	98.24
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.89
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.82
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.75
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.75
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.75
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.75
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.62
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.59
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	97.56
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.55
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.51
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.32
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	95.84
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.82
KOG1266	458	consensus Protein kinase [Signal transduction mech	94.74
KOG0606	1205	consensus Microtubule-associated serine/threonine	94.48
KOG0590	601	consensus Checkpoint kinase and related serine/thr	82.46

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.66  E-value=3.1e-16  Score=99.32  Aligned_cols=96  Identities=21%  Similarity=0.379  Sum_probs=71.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhh---------------cCCcCcccccHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSM---------------VDPAVNKACLDES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~   65 (127)
                      .|++.+|||++||++.||++|.+.| +..+.+++..+...++.-.+ +-.++               .++...+.--+..
T Consensus       178 qYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p-rhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~  256 (396)
T KOG0593|consen  178 QYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP-RHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKI  256 (396)
T ss_pred             cCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH-HHHHHhccCCceeeeecCCCCCccchhhhcccc
Confidence            5899999999999999999999998 56788888888877666544 22221               1222111112223


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ..-.++|+.+||.+||++|+++++++.|.+|..
T Consensus       257 s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  257 SNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             hHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            346789999999999999999999999999843

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.64  E-value=3.1e-15  Score=89.80  Aligned_cols=88  Identities=18%  Similarity=0.244  Sum_probs=57.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHH--HHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DL-LKNQLQAVITADESARRSMVDPAVNKACLDESL--KTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~cl   77 (127)
                      .|+.++||||+||++|||++|+.||..... .. ...+..   .     .... .+.. ........  ..+.+++.+||
T Consensus        80 ~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~---~-----~~~~-~~~~-~~~~~~~~~~~~~~~~i~~cl  149 (176)
T smart00750       80 SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN---G-----MPAD-DPRD-RSNLESVSAARSFADFMRVCA  149 (176)
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH---H-----hccC-Cccc-cccHHHHHhhhhHHHHHHHHH
Confidence            477899999999999999999999853321 11 111110   0     0000 0000 00111122  25789999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhh
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+|.+||++.+++.|++....
T Consensus       150 ~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      150 SRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             hcccccccCHHHHHHHHHHHHH
Confidence            9999999999999999987653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=4.1e-16  Score=100.12  Aligned_cols=99  Identities=22%  Similarity=0.358  Sum_probs=72.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhhcC----------CcC-c---ccccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSMVD----------PAV-N---KACLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~---~~~~~~~~   66 (127)
                      .|+..+||||+||++.||++|++.| +.....++..+....+.+..+.+..+..          |.. +   ...-+...
T Consensus       204 ~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~  283 (359)
T KOG0660|consen  204 EYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNAN  283 (359)
T ss_pred             cccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCC
Confidence            5899999999999999999999999 4566778888877766665544333321          111 1   11112334


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      ....+|+.++|..||.+|+|+++++.|+++..-.
T Consensus       284 p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h  317 (359)
T KOG0660|consen  284 PLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH  317 (359)
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence            5678999999999999999999999999965543

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.62  E-value=4.3e-16  Score=103.96  Aligned_cols=82  Identities=22%  Similarity=0.351  Sum_probs=58.9

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      |+|+.++||||||+++||+++ |+.|+........-..+...               .+-..+..|+..+.++|..||..
T Consensus       379 ~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G---------------yRlp~P~~CP~~vY~lM~~CW~~  443 (468)
T KOG0197|consen  379 GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG---------------YRLPRPEGCPDEVYELMKSCWHE  443 (468)
T ss_pred             CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc---------------CcCCCCCCCCHHHHHHHHHHhhC
Confidence            679999999999999999999 88888654433332222111               11112344556788999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|++|||+..+...+..+
T Consensus       444 ~P~~RPtF~~L~~~l~~~  461 (468)
T KOG0197|consen  444 DPEDRPTFETLREVLEDF  461 (468)
T ss_pred             CcccCCCHHHHHHHHHHh
Confidence            999999999887666543

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.61  E-value=1.6e-15  Score=106.05  Aligned_cols=85  Identities=24%  Similarity=0.444  Sum_probs=64.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCC-chhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKS-RKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      |+|+.++||||||+++||+++ |+.|+. ..+.+.+..+.               ...+ -.++..++..+.+||..||+
T Consensus       680 ~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~---------------~g~l-L~~Pe~CP~~vY~LM~~CW~  743 (774)
T KOG1026|consen  680 GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR---------------AGQL-LSCPENCPTEVYSLMLECWN  743 (774)
T ss_pred             CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH---------------cCCc-ccCCCCCCHHHHHHHHHHhh
Confidence            689999999999999999999 888874 34444333222               1111 23456677789999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhcc
Q 039745           79 KNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+|++||+++++-..|.......
T Consensus       744 ~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  744 ENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             cCcccCCCHHHHHHHHHHHHhcC
Confidence            99999999999988887555433

>PHA02988 hypothetical protein; Provisional

Probab=99.61  E-value=4.3e-15  Score=95.43  Aligned_cols=84  Identities=18%  Similarity=0.296  Sum_probs=59.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||||+++||+++|+.||...........+.   .       ....+..+    ......+.+|+.+||..+|
T Consensus       198 ~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~---~-------~~~~~~~~----~~~~~~l~~li~~cl~~dp  263 (283)
T PHA02988        198 EYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLII---N-------KNNSLKLP----LDCPLEIKCIVEACTSHDS  263 (283)
T ss_pred             cccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---h-------cCCCCCCC----CcCcHHHHHHHHHHhcCCc
Confidence            57889999999999999999999997554332222110   0       00011111    1234467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.+++..+.....
T Consensus       264 ~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        264 IKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             ccCcCHHHHHHHHHHHHh
Confidence            999999999998876543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.58  E-value=1.3e-15  Score=98.15  Aligned_cols=88  Identities=25%  Similarity=0.383  Sum_probs=61.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh---HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE---VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      .|+.++||||||+.++|++.|+.|+....   ......+.. ....        ..|.++..   ....++.+|+..||+
T Consensus       253 ~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~-Iv~~--------ppP~lP~~---~fS~ef~~FV~~CL~  320 (364)
T KOG0581|consen  253 SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCA-IVDE--------PPPRLPEG---EFSPEFRSFVSCCLR  320 (364)
T ss_pred             cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHH-HhcC--------CCCCCCcc---cCCHHHHHHHHHHhc
Confidence            68999999999999999999999986531   111111111 1111        11333322   244577899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhcc
Q 039745           79 KNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ++|.+|+++.+++.|+|......
T Consensus       321 Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  321 KDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             CCcccCCCHHHHhcCHHHhhccc
Confidence            99999999999999999765443

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=8.9e-15  Score=98.58  Aligned_cols=86  Identities=17%  Similarity=0.291  Sum_probs=62.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+|++.+||+.|++||... ....++.+..            -..|.+.  .+......+.+|+.+||..|
T Consensus       445 ~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~------------ng~P~lk--~~~klS~~~kdFL~~cL~~d  510 (550)
T KOG0578|consen  445 PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT------------NGTPKLK--NPEKLSPELKDFLDRCLVVD  510 (550)
T ss_pred             ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh------------cCCCCcC--CccccCHHHHHHHHHHhhcc
Confidence            4899999999999999999999998643 3333333321            1112221  22344557789999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +.+|+++.++|+|+++....+
T Consensus       511 v~~RasA~eLL~HpFl~~a~p  531 (550)
T KOG0578|consen  511 VEQRASAKELLEHPFLKMAKP  531 (550)
T ss_pred             hhcCCCHHHHhcChhhhhcCC
Confidence            999999999999999854433

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=3.2e-15  Score=100.97  Aligned_cols=84  Identities=20%  Similarity=0.352  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccH-HHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD-ESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~   80 (127)
                      +++.++||||+||++|+|+.|+.||+.....    +-         ++..+.+|...=+++. .....+.++|..||..|
T Consensus       548 Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~----~a---------Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rd  614 (677)
T KOG0596|consen  548 KISRKSDVWSLGCILYQMVYGKTPFGQIINQ----IA---------KLHAITDPNHEIEFPDIPENDELIDVMKCCLARD  614 (677)
T ss_pred             eecCccchhhhhhHHHHHHhcCCchHHHHHH----HH---------HHHhhcCCCccccccCCCCchHHHHHHHHHHhcC
Confidence            5778999999999999999999999744311    11         2233333321000100 00112779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++|.+...
T Consensus       615 PkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  615 PKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             cccCCCcHHHhcCccccc
Confidence            999999999999998655

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.54  E-value=6.6e-14  Score=92.41  Aligned_cols=84  Identities=23%  Similarity=0.424  Sum_probs=61.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.|+||||||+++||+++|+.||......+.....  ...        -..+.+    +..+...+..++..||..+|
T Consensus       222 ~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v--~~~--------~~Rp~~----p~~~~~~l~~l~~~CW~~dp  287 (362)
T KOG0192|consen  222 PYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV--VVG--------GLRPPI----PKECPPHLSSLMERCWLVDP  287 (362)
T ss_pred             cCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH--Hhc--------CCCCCC----CccCCHHHHHHHHHhCCCCC
Confidence            5899999999999999999999999755432222111  111        111222    22255577799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..||++.+++..+..+..
T Consensus       288 ~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  288 SRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CcCCCHHHHHHHHHHHHH
Confidence            999999999998887655

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=3e-14  Score=94.71  Aligned_cols=105  Identities=22%  Similarity=0.324  Sum_probs=78.3

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhh------hcC---CcCc----ccccHHHH
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRS------MVD---PAVN----KACLDESL   66 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~----~~~~~~~~   66 (127)
                      |.|+.++|||++||+++|+.+-++.| +..+.+++..+...++.+.+....+      .++   |...    ........
T Consensus       185 ~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s  264 (538)
T KOG0661|consen  185 GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNAS  264 (538)
T ss_pred             cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccC
Confidence            57999999999999999999998888 5677788888888777765432222      111   1111    11122356


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcccccc
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWH  105 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~~~~  105 (127)
                      .++.+++.+|+..||.+||++.++++|++|.........
T Consensus       265 ~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~~~~  303 (538)
T KOG0661|consen  265 SEAASLIERLLAWDPDKRPTASQALQHPFFQVGRASGSS  303 (538)
T ss_pred             HHHHHHHHHHhcCCCccCccHHHHhcCcccccccccccc
Confidence            678899999999999999999999999998877655433

>PTZ00284 protein kinase; Provisional

Probab=99.52  E-value=3.5e-14  Score=96.95  Aligned_cols=100  Identities=11%  Similarity=0.090  Sum_probs=61.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHH--------hhhc------CCcCccc------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESAR--------RSMV------DPAVNKA------   60 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~------~~~~~~~------   60 (127)
                      .|+.++||||+||++|||++|+.||.... ...+..+....+..+....        ..+.      .+.....      
T Consensus       321 ~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (467)
T PTZ00284        321 GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIA  400 (467)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhh
Confidence            47789999999999999999999996433 2333333222211111000        0000      0000000      


Q ss_pred             -----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           61 -----CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        61 -----~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                           ........+.+|+.+||.+||.+|+++.+++.|+|+....+
T Consensus       401 ~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        401 RARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             cccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence                 00011235679999999999999999999999999876444

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.52  E-value=3.2e-14  Score=88.69  Aligned_cols=98  Identities=16%  Similarity=0.270  Sum_probs=73.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhhc-----------CCcCcccccHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSMV-----------DPAVNKACLDESLKTM   69 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~   69 (127)
                      +|+..+||||+||++.|++.|.+.| +..+.+++..++..++.+.....+++.           +.......-..+....
T Consensus       178 ~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~  257 (318)
T KOG0659|consen  178 QYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDA  257 (318)
T ss_pred             hcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHH
Confidence            4889999999999999999998877 567888888888777665554333321           1111111223444566


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+|+.+++.+||.+|.+++++++|.+|...
T Consensus       258 ldLl~~m~~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  258 LDLLSKMLTYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             HHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence            899999999999999999999999998763

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.52  E-value=2.6e-14  Score=96.98  Aligned_cols=98  Identities=23%  Similarity=0.319  Sum_probs=63.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhh-------cCCcCcc-----cccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSM-------VDPAVNK-----ACLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~   68 (127)
                      .|+.++||||+||+++||++|.+||... ....+..++...+..........       ..+....     ..+......
T Consensus       247 ~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~  326 (440)
T PTZ00036        247 NYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDD  326 (440)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHH
Confidence            4788999999999999999999998543 33444444433322222111110       0011000     011112346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +.+|+.+||..+|.+|+++.+++.|+|+...
T Consensus       327 ~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        327 AINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence            7899999999999999999999999998543

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.51  E-value=3.5e-14  Score=93.00  Aligned_cols=82  Identities=18%  Similarity=0.277  Sum_probs=64.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+..+|+||||+++||+++ |+.|+...+......++.......+               +-+++.++..+|..||...
T Consensus       474 ~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQ---------------P~NCPDeLf~vMacCWall  538 (563)
T KOG1024|consen  474 HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQ---------------PFNCPDELFTVMACCWALL  538 (563)
T ss_pred             hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecC---------------CCCCcHHHHHHHHHHHhcC
Confidence            47889999999999999988 9999988887777766643222111               2334556779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |++||++++++.-+..+.
T Consensus       539 peeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  539 PEERPSFSQLVICLSEFH  556 (563)
T ss_pred             cccCCCHHHHHHHHHHHH
Confidence            999999999998776543

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.51  E-value=4.3e-14  Score=92.60  Aligned_cols=98  Identities=22%  Similarity=0.302  Sum_probs=59.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhc-----------CCcCccc---ccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMV-----------DPAVNKA---CLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~   66 (127)
                      .++.++||||+||+++||++|+.||..... ..+..+....+.........+.           .......   ......
T Consensus       184 ~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (338)
T cd07859         184 KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNAD  263 (338)
T ss_pred             ccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCC
Confidence            467899999999999999999999854332 2222222222111111111100           0000000   000112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+++.+||..+|.+||++.+++.|.|+...
T Consensus       264 ~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         264 PLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             hHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence            356799999999999999999999999998543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.51  E-value=8.9e-15  Score=102.18  Aligned_cols=89  Identities=15%  Similarity=0.300  Sum_probs=66.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCC-chhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKS-RKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +++..+||||||+|+||+++ |++||. ..+.+.+..+..                ..+-.-+.+++..+..||+.||++
T Consensus       810 KFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~----------------gyRLPpPmDCP~aL~qLMldCWqk  873 (996)
T KOG0196|consen  810 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQ----------------GYRLPPPMDCPAALYQLMLDCWQK  873 (996)
T ss_pred             ccCchhhccccceEEEEecccCCCcccccchHHHHHHHHh----------------ccCCCCCCCCcHHHHHHHHHHHHH
Confidence            68899999999999999877 999974 455555444431                111111355677889999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhccccccc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQDAWHS  106 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~~~~~~  106 (127)
                      +...||++.+++.++..+.-.+.....
T Consensus       874 dR~~RP~F~qiV~~lDklIrnP~SLk~  900 (996)
T KOG0196|consen  874 DRNRRPKFAQIVSTLDKLIRNPNSLKT  900 (996)
T ss_pred             HhhcCCCHHHHHHHHHHHhcCchhhcc
Confidence            999999999999999887765554433

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.51  E-value=6e-14  Score=101.14  Aligned_cols=84  Identities=17%  Similarity=0.294  Sum_probs=60.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      |.|+.|+||||||+++||+++ |..||......+.......         .    .++  ..+..++..+.++|..||+.
T Consensus       879 ~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~---------g----gRL--~~P~~CP~~ly~lM~~CW~~  943 (1025)
T KOG1095|consen  879 GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE---------G----GRL--DPPSYCPEKLYQLMLQCWKH  943 (1025)
T ss_pred             cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh---------C----Ccc--CCCCCCChHHHHHHHHHccC
Confidence            579999999999999999999 8889965543332222200         0    111  11234555777999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|++||++..+++.+..+..
T Consensus       944 ~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  944 DPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             ChhhCccHHHHHhhhhhhhh
Confidence            99999999999987665554

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.51  E-value=5.1e-14  Score=92.99  Aligned_cols=87  Identities=18%  Similarity=0.188  Sum_probs=57.8

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++|||||||++|||++|+.||................        ....+...    ......+.+|+.+||..+|.+
T Consensus       251 ~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~l~~li~~~l~~~P~~  318 (353)
T PLN00034        251 GYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC--------MSQPPEAP----ATASREFRHFISCCLQREPAK  318 (353)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh--------ccCCCCCC----CccCHHHHHHHHHHccCChhh
Confidence            358999999999999999999986332211111111000        00011111    122345779999999999999


Q ss_pred             CCCHHHHHHHHHHhhhccc
Q 039745           84 RPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~~  102 (127)
                      ||++.++++|.|+......
T Consensus       319 Rpt~~ell~hp~~~~~~~~  337 (353)
T PLN00034        319 RWSAMQLLQHPFILRAQPG  337 (353)
T ss_pred             CcCHHHHhcCcccccCCcc
Confidence            9999999999998776443

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.50  E-value=2.3e-14  Score=92.05  Aligned_cols=95  Identities=21%  Similarity=0.286  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhh-------cCCcC---cccccHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSM-------VDPAV---NKACLDESLKTMM   70 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~~   70 (127)
                      .++.++||||+|++++||++|++||... ....+..+............+..       .....   ...........+.
T Consensus       185 ~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (290)
T cd07862         185 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGK  264 (290)
T ss_pred             CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHH
Confidence            4678899999999999999999998643 33334444332221111111100       00000   0001112234567


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +++.+||..+|.+||++.++++|++|
T Consensus       265 ~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         265 DLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHHHhccCchhcCCHHHHhcCCCC
Confidence            99999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.50  E-value=9.5e-14  Score=91.00  Aligned_cols=99  Identities=21%  Similarity=0.289  Sum_probs=60.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHh-hch-------------------------------HHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVIT-ADE-------------------------------SAR   49 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~-~~~-------------------------------~~~   49 (127)
                      .++.++|+||+||+++|+++|+.||.......+...+..... ...                               ...
T Consensus       178 ~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (331)
T cd06649         178 HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELL  257 (331)
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHH
Confidence            477899999999999999999999965443333222210000 000                               000


Q ss_pred             hhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           50 RSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      ...................+.+|+.+||..+|.+||++.+++.|.|+....
T Consensus       258 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         258 DYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             HHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence            000000000000011234677999999999999999999999999976543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.50  E-value=5.5e-14  Score=90.20  Aligned_cols=95  Identities=23%  Similarity=0.269  Sum_probs=57.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhh---------hcCCcCcc------cccHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRS---------MVDPAVNK------ACLDES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~------~~~~~~   65 (127)
                      .++.++|+||+|++++||++|+.||..... ..+..+..............         ...+....      ......
T Consensus       177 ~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (287)
T cd07848         177 PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGIL  256 (287)
T ss_pred             CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhccc
Confidence            467899999999999999999999864332 22222221111111101100         00000000      000112


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ...+.+|+.+||..+|.+|+++.++++|+||
T Consensus       257 s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         257 SGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            3457899999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=2.5e-14  Score=94.19  Aligned_cols=82  Identities=23%  Similarity=0.353  Sum_probs=59.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      -|+.++||||+|++.+||++|.+|+........  ++         .++.-.+|.+.+    .....+.+|+..||.++|
T Consensus       187 ~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv--lf---------lIpk~~PP~L~~----~~S~~~kEFV~~CL~k~P  251 (467)
T KOG0201|consen  187 GYDTKADIWSLGITAIELAKGEPPHSKLHPMRV--LF---------LIPKSAPPRLDG----DFSPPFKEFVEACLDKNP  251 (467)
T ss_pred             cccchhhhhhhhHHHHHHhcCCCCCcccCcceE--EE---------eccCCCCCcccc----ccCHHHHHHHHHHhhcCc
Confidence            388999999999999999999999865443111  11         112223333333    344467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      ..||++.++++|-+...
T Consensus       252 ~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  252 EFRPSAKELLKHKFIKR  268 (467)
T ss_pred             ccCcCHHHHhhhHHHHh
Confidence            99999999999887433

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=4.7e-14  Score=95.90  Aligned_cols=81  Identities=26%  Similarity=0.413  Sum_probs=62.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++..+||||+||++|.++.|++||...........+.         .....-|.       .......+|+..+|..+|.
T Consensus       195 HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik---------~~~Y~~P~-------~ls~~A~dLI~~lL~~~P~  258 (592)
T KOG0575|consen  195 HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK---------LNEYSMPS-------HLSAEAKDLIRKLLRPNPS  258 (592)
T ss_pred             CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH---------hcCccccc-------ccCHHHHHHHHHHhcCCcc
Confidence            5678999999999999999999998777665555542         11111121       2233556999999999999


Q ss_pred             CCCCHHHHHHHHHHhhh
Q 039745           83 ERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~   99 (127)
                      +||++.+++.|.+|...
T Consensus       259 ~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  259 ERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             cCCCHHHHhcCHhhhCC
Confidence            99999999999999443

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=5.6e-14  Score=92.90  Aligned_cols=93  Identities=20%  Similarity=0.297  Sum_probs=63.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.|+||||||+...|+++|..||..........+.  +...++    ................+.+++++..||..||.
T Consensus       209 YdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~pp----~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~  282 (516)
T KOG0582|consen  209 YDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDPP----TLLTSGLDKDEDKKFSKSFREMIALCLVKDPS  282 (516)
T ss_pred             ccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCCC----CcccccCChHHhhhhcHHHHHHHHHHhhcCcc
Confidence            889999999999999999999999866644321111  111110    01111111122233345788999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhcc
Q 039745           83 ERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +||++++++.|.||-....
T Consensus       283 kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  283 KRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             cCCCHHHHhccHHHhhccc
Confidence            9999999999999866543

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.49  E-value=8.3e-14  Score=95.21  Aligned_cols=99  Identities=21%  Similarity=0.271  Sum_probs=71.9

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhhc------CC-----c------------
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSMV------DP-----A------------   56 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----~------------   56 (127)
                      +.|+.+.||||||||++||++|.+.| +....+++..+....+.++...+....      +.     .            
T Consensus       363 lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k  442 (586)
T KOG0667|consen  363 LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTK  442 (586)
T ss_pred             CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeeccccccc
Confidence            36899999999999999999999888 566778888888877765543222110      00     0            


Q ss_pred             ----------------Cc-c------cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           57 ----------------VN-K------ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        57 ----------------~~-~------~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                                      .+ .      .........+.+|+.+||..||..|++..++++|+|+...
T Consensus       443 ~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  443 SPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             chhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence                            00 0      0011234468999999999999999999999999998743

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.48  E-value=1.7e-13  Score=87.77  Aligned_cols=79  Identities=22%  Similarity=0.381  Sum_probs=56.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.   ..        ..+.    .+......+.+|+.+||..+
T Consensus       202 ~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~---~~--------~~~~----~~~~~~~~~~~l~~~c~~~~  266 (283)
T cd05048         202 KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR---SR--------QLLP----CPEDCPARVYALMIECWNEI  266 (283)
T ss_pred             cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---cC--------CcCC----CcccCCHHHHHHHHHHccCC
Confidence            46788999999999999998 988986544332222221   00        0011    12233456779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++++++.
T Consensus       267 p~~Rp~~~~i~~~l~  281 (283)
T cd05048         267 PARRPRFKDIHTRLR  281 (283)
T ss_pred             hhhCcCHHHHHHHHh
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.48  E-value=7.3e-14  Score=89.86  Aligned_cols=95  Identities=22%  Similarity=0.268  Sum_probs=59.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhc---------CCcCccc----ccHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMV---------DPAVNKA----CLDESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~~~~~~   67 (127)
                      .++.++||||+|+++++|++|+.||..... ..+..+............+...         .+.....    .......
T Consensus       180 ~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (288)
T cd07871         180 EYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDT  259 (288)
T ss_pred             ccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCH
Confidence            367889999999999999999999864433 2233333222222221111111         1110000    0011123


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ...+|+.+||..+|.+|+++.++++|+||
T Consensus       260 ~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         260 DGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            56799999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.48  E-value=1.7e-13  Score=90.71  Aligned_cols=97  Identities=32%  Similarity=0.532  Sum_probs=71.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhch-HHHhhhcCCcCc-ccccH-HHHHHHHHHHHHhc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADE-SARRSMVDPAVN-KACLD-ESLKTMMEVCVRCL   77 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~cl   77 (127)
                      |+++.|+||||||++++|+++|+++.+.........+..+...... ..+.+++|+.+. ..+.. .....+..+..+|+
T Consensus       253 g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~  332 (361)
T KOG1187|consen  253 GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCL  332 (361)
T ss_pred             CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHc
Confidence            5688999999999999999999988764321111112222222211 267889999987 55554 67788999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHh
Q 039745           78 LKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      +.++..||+|.+|+..+...
T Consensus       333 ~~~~~~RP~m~~Vv~~L~~~  352 (361)
T KOG1187|consen  333 RPDPKERPTMSQVVKELEGI  352 (361)
T ss_pred             CcCCCcCcCHHHHHHHHHhh
Confidence            99999999999998888443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.47  E-value=3.1e-13  Score=99.12  Aligned_cols=98  Identities=23%  Similarity=0.461  Sum_probs=64.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcc--cccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNK--ACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl   77 (127)
                      .|+.++||||||+++||+++|+.|+.....  .....+.....  .........++....  .........+.+++.+||
T Consensus       854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl  931 (968)
T PLN00113        854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCY--SDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCT  931 (968)
T ss_pred             CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhc--CccchhheeCccccCCCCccHHHHHHHHHHHHhhC
Confidence            478899999999999999999999853211  11111111110  111223344444322  123455567889999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+|.+||++.++++.+.......
T Consensus       932 ~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        932 ATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             cCCchhCcCHHHHHHHHHHhhccc
Confidence            999999999999999987665433

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.47  E-value=3.9e-14  Score=96.58  Aligned_cols=82  Identities=20%  Similarity=0.375  Sum_probs=59.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      .+.|+||||||+|||||++|..||...+...   ++.           .+..-.+.-..+..++..+.=|+..||.-+|.
T Consensus       288 csEKVDIwSfGVVLWEmLT~EiPYkdVdssA---IIw-----------GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR  353 (904)
T KOG4721|consen  288 CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA---IIW-----------GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR  353 (904)
T ss_pred             cccccceehhHHHHHHHHhcCCCccccchhe---eEE-----------eccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence            4679999999999999999999986444321   111           11111121223345566777889999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      .||+|.+++.|+....
T Consensus       354 NRPSFrqil~HldIa~  369 (904)
T KOG4721|consen  354 NRPSFRQILLHLDIAS  369 (904)
T ss_pred             CCccHHHHHHHHhhcC
Confidence            9999999999997543

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.46  E-value=1e-13  Score=88.97  Aligned_cols=95  Identities=20%  Similarity=0.238  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhc-------CCcC---cccccHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMV-------DPAV---NKACLDESLKTMM   70 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~   70 (127)
                      .++.++||||+||+++||++|+++|.... ...+..+............+...       .+..   ...........+.
T Consensus       183 ~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (288)
T cd07863         183 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGA  262 (288)
T ss_pred             CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHH
Confidence            46789999999999999999999985433 23333333222111111111000       0000   0011112234567


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +++.+||..||.+||++.+++.|+||
T Consensus       263 ~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         263 QLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HHHHHHhccCcccCCCHHHHhcCCCC
Confidence            99999999999999999999998774

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.45  E-value=1.4e-13  Score=87.62  Aligned_cols=81  Identities=19%  Similarity=0.271  Sum_probs=54.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+|++++|+++|..||............           .....+...   .......+.+|+.+||..+|
T Consensus       192 ~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~~~~li~~~l~~~p  257 (272)
T cd06637         192 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-----------PRNPAPRLK---SKKWSKKFQSFIESCLVKNH  257 (272)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH-----------hcCCCCCCC---CCCcCHHHHHHHHHHcCCCh
Confidence            3677899999999999999999998543322111111           000011111   11122356799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.+++.|.|+
T Consensus       258 ~~Rpt~~~il~~~~~  272 (272)
T cd06637         258 SQRPTTEQLMKHPFI  272 (272)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999998764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.45  E-value=1.9e-13  Score=87.70  Aligned_cols=87  Identities=16%  Similarity=0.268  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++|+++|+.||..... ....+..         ......+.............+.+|+.+||..+|
T Consensus       186 ~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  255 (288)
T cd06616         186 GYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLTQ---------VVKGDPPILSNSEEREFSPSFVNFINLCLIKDE  255 (288)
T ss_pred             CCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHhh---------hcCCCCCcCCCcCCCccCHHHHHHHHHHccCCh
Confidence            367899999999999999999999854331 1111110         000001111111112234467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.+++.|.++..
T Consensus       256 ~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         256 SKRPKYKELLEHPFIKD  272 (288)
T ss_pred             hhCcCHHHHhcChhhhc
Confidence            99999999999999754

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.45  E-value=3.5e-13  Score=86.16  Aligned_cols=79  Identities=18%  Similarity=0.314  Sum_probs=54.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+||+++|+++ |..||...........+.   ..        ......    ......+.+++.+||..+
T Consensus       197 ~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~---~~--------~~~~~~----~~~~~~~~~~i~~cl~~~  261 (277)
T cd05036         197 IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT---GG--------GRLDPP----KGCPGPVYRIMTDCWQHT  261 (277)
T ss_pred             CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---cC--------CcCCCC----CCCCHHHHHHHHHHcCCC
Confidence            47789999999999999997 888886544332222210   00        001111    112345679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |++||++.++++++.
T Consensus       262 p~~Rps~~~vl~~l~  276 (277)
T cd05036         262 PEDRPNFATILERIQ  276 (277)
T ss_pred             cccCcCHHHHHHHhh
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.45  E-value=3.3e-13  Score=86.26  Aligned_cols=93  Identities=18%  Similarity=0.218  Sum_probs=57.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCc------Ccc-------cccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPA------VNK-------ACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~   68 (127)
                      ++.++|+||+|++++||++|..||...... ....+......... .........      ...       .........
T Consensus       176 ~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (282)
T cd07831         176 YGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDA-EVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAE  254 (282)
T ss_pred             CCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCH-HHHHhhcccccccccCcccccccHHHHcccccHH
Confidence            577899999999999999999998644322 22222221111111 111110000      000       001123457


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +.+++.+||..+|.+||++.+++.|.|+
T Consensus       255 ~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         255 GLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            8899999999999999999999998764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.44  E-value=3e-13  Score=87.97  Aligned_cols=94  Identities=16%  Similarity=0.276  Sum_probs=55.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh----------HHHHHHHHHHHHhhchHHHhhhc------------CCcCccc
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE----------VDLLKNQLQAVITADESARRSMV------------DPAVNKA   60 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~   60 (127)
                      |+.++||||+||+++||++|++||....          ..++..+....+...........            .......
T Consensus       193 ~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (317)
T cd07868         193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN  272 (317)
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCc
Confidence            6788999999999999999999985322          12222222221111110000000            0000000


Q ss_pred             c---------cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           61 C---------LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        61 ~---------~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .         .......+.+|+.+||..||.+|+|+.++++|+||
T Consensus       273 ~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         273 CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             ccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            0         00011246789999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.43  E-value=2.7e-13  Score=86.89  Aligned_cols=95  Identities=13%  Similarity=0.201  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHH-hhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVI-TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++|..|+........ ....... ..........................+.+++..||..+
T Consensus       186 ~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  264 (283)
T cd05080         186 KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE  264 (283)
T ss_pred             CCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC
Confidence            357789999999999999999988754321111 1110000 00000111111111111111223346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.+++..+..+
T Consensus       265 p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         265 AKFRPTFRSLIPILKEM  281 (283)
T ss_pred             hhhCCCHHHHHHHHHHh
Confidence            99999999999877643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.43  E-value=1.5e-13  Score=92.72  Aligned_cols=80  Identities=13%  Similarity=0.249  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      ..+..+|+|+|||++|.|+.|.+||-..+.. ....+...         .--..+.+        +....+|+.++|..+
T Consensus       263 ~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l---------~y~fp~~f--------p~~a~dLv~KLLv~d  325 (604)
T KOG0592|consen  263 PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL---------DYEFPEGF--------PEDARDLIKKLLVRD  325 (604)
T ss_pred             CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh---------cccCCCCC--------CHHHHHHHHHHHccC
Confidence            3568899999999999999999999654433 22333311         11111222        235669999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+|++++++.+|++|..
T Consensus       326 p~~Rlt~~qIk~HpFF~~  343 (604)
T KOG0592|consen  326 PSDRLTSQQIKAHPFFEG  343 (604)
T ss_pred             ccccccHHHHhhCccccc
Confidence            999999999999998743

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.43  E-value=8.5e-13  Score=83.79  Aligned_cols=80  Identities=21%  Similarity=0.321  Sum_probs=55.4

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..|+...........+           .....+....    .....+.+++.+||..+
T Consensus       181 ~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~~li~~cl~~~  245 (263)
T cd05052         181 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----------EKGYRMERPE----GCPPKVYELMRACWQWN  245 (263)
T ss_pred             CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----------HCCCCCCCCC----CCCHHHHHHHHHHccCC
Confidence            35678999999999999998 88888654433322221           0111111111    12346779999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |++||++.++++.+..
T Consensus       246 p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         246 PSDRPSFAEIHQAFET  261 (263)
T ss_pred             cccCCCHHHHHHHHHh
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.43  E-value=2.8e-13  Score=92.34  Aligned_cols=82  Identities=22%  Similarity=0.385  Sum_probs=63.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+..+|+||+||++||+..|++||......++...+             ..++..   .+......+.+|++.+|.+||
T Consensus       176 pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I-------------~~d~v~---~p~~~S~~f~nfl~gLL~kdP  239 (808)
T KOG0597|consen  176 PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI-------------LKDPVK---PPSTASSSFVNFLQGLLIKDP  239 (808)
T ss_pred             CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-------------hcCCCC---CcccccHHHHHHHHHHhhcCh
Confidence            5889999999999999999999999876665554443             011111   123455678899999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..|.++.+++.|++.-..
T Consensus       240 ~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  240 AQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             hhcccHHHHhcChHHhhh
Confidence            999999999999986544

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.43  E-value=1e-12  Score=84.02  Aligned_cols=83  Identities=23%  Similarity=0.328  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++||++|..|+............           .....+    .........+.+++.+||..+|
T Consensus       177 ~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06640         177 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-----------PKNNPP----TLTGEFSKPFKEFIDACLNKDP  241 (277)
T ss_pred             CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-----------hcCCCC----CCchhhhHHHHHHHHHHcccCc
Confidence            3567899999999999999999998644322111110           000111    1223345567799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.+++.|.++...
T Consensus       242 ~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         242 SFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             ccCcCHHHHHhChHhhhc
Confidence            999999999999887543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.43  E-value=6.2e-13  Score=84.15  Aligned_cols=80  Identities=19%  Similarity=0.267  Sum_probs=55.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.           .-..+..+..    ....+.+++.+||..+
T Consensus       174 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-----------~~~~~~~~~~----~~~~l~~li~~~~~~~  238 (257)
T cd05116         174 KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-----------SGERMECPQR----CPPEMYDLMKLCWTYG  238 (257)
T ss_pred             CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------CCCCCCCCCC----CCHHHHHHHHHHhccC
Confidence            35678999999999999998 899986544332222221           0001112122    2345679999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |++||++.++...+..
T Consensus       239 p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         239 VDERPGFAVVELRLRN  254 (257)
T ss_pred             chhCcCHHHHHHHHhc
Confidence            9999999999887753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.43  E-value=3.1e-13  Score=83.93  Aligned_cols=85  Identities=21%  Similarity=0.264  Sum_probs=62.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+..+|||+.|+++|-++.|.+||.......+...+..          .  +-......+........+|+.++|..||
T Consensus       188 py~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~----------g--~yd~~~~~w~~is~~Ak~LvrrML~~dP  255 (355)
T KOG0033|consen  188 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKA----------G--AYDYPSPEWDTVTPEAKSLIRRMLTVNP  255 (355)
T ss_pred             CCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhc----------c--ccCCCCcccCcCCHHHHHHHHHHhccCh
Confidence            588999999999999999999999976554444433311          0  0111222334445567799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+|.|+.++++|+|...
T Consensus       256 ~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  256 KKRITADEALKHPWICN  272 (355)
T ss_pred             hhhccHHHHhCCchhcc
Confidence            99999999999999543

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.43  E-value=1.9e-13  Score=87.83  Aligned_cols=85  Identities=18%  Similarity=0.262  Sum_probs=56.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||...........+..       ..... ....    .......+.+|+.+||..+|
T Consensus       177 ~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~-------~~~~~-~~~~----~~~~s~~~~~li~~~l~~~P  244 (285)
T cd05631         177 KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR-------RVKED-QEEY----SEKFSEDAKSICRMLLTKNP  244 (285)
T ss_pred             CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHH-------Hhhcc-cccC----CccCCHHHHHHHHHHhhcCH
Confidence            477899999999999999999999964432211111100       00000 0011    11123356689999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|++     ++++++|.++..
T Consensus       245 ~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         245 KERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HHhcCCCCCCHHHHhcCHhhcC
Confidence            99997     899999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.43  E-value=3.8e-13  Score=92.93  Aligned_cols=81  Identities=20%  Similarity=0.315  Sum_probs=62.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+-|+|||+||+++||+.+ |-.||...+.++.+.++.....+.               .+..|+..+.+||..||+.+
T Consensus       442 tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~---------------~PeGCPpkVYeLMraCW~Ws  506 (1157)
T KOG4278|consen  442 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMD---------------GPEGCPPKVYELMRACWNWS  506 (1157)
T ss_pred             ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccccc---------------CCCCCCHHHHHHHHHHhcCC
Confidence            46779999999999999988 788898888777666653322222               12334557789999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.++.+.+..+
T Consensus       507 PsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  507 PSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             cccCccHHHHHHHHHHH
Confidence            99999999988766543

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.42  E-value=6.1e-13  Score=87.35  Aligned_cols=98  Identities=20%  Similarity=0.295  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhch------------------------------HHHhh
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADE------------------------------SARRS   51 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~   51 (127)
                      .++.++|+||+||+++|+++|+.||.......+............                              .....
T Consensus       178 ~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (333)
T cd06650         178 HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDY  257 (333)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHH
Confidence            367889999999999999999999865443322221110000000                              00000


Q ss_pred             hcCCcCcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           52 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +................+.+|+.+||+.+|.+||++.+++.|.++...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         258 IVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             HhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence            000000000000112356799999999999999999999999997554

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.42  E-value=1.1e-12  Score=83.98  Aligned_cols=85  Identities=14%  Similarity=0.275  Sum_probs=57.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||||+++||+++ |..||..........++.   ..     ..   +.....    +...+..++.+||..+
T Consensus       187 ~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~---~~-----~~---~~~~~~----~~~~~~~li~~c~~~~  251 (279)
T cd05111         187 RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE---KG-----ER---LAQPQI----CTIDVYMVMVKCWMID  251 (279)
T ss_pred             CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---CC-----Cc---CCCCCC----CCHHHHHHHHHHcCCC
Confidence            47788999999999999998 998986554333322221   00     00   111111    1234568899999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |..||++.+++..+..+...+
T Consensus       252 p~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         252 ENVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             cccCcCHHHHHHHHHHHHhCC
Confidence            999999999999877655433

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.42  E-value=3.1e-13  Score=87.21  Aligned_cols=101  Identities=21%  Similarity=0.315  Sum_probs=77.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhhcC-------CcCccc-----ccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSMVD-------PAVNKA-----CLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~   68 (127)
                      .|+.+.||||.|||+.||+.|++.| +....+++..++...+.+..+.+..+..       |.+...     .......+
T Consensus       202 ~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d  281 (364)
T KOG0658|consen  202 EYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPD  281 (364)
T ss_pred             ccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHH
Confidence            4899999999999999999999998 4566788888888877776655544322       111111     12233456


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      ..+|+.++|.++|.+|.++.+++.|.+|......
T Consensus       282 ~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  282 ALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             HHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            7899999999999999999999999998766554

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=7e-13  Score=85.06  Aligned_cols=86  Identities=21%  Similarity=0.291  Sum_probs=58.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++++++|+.||...............        .....+..    .......+.+|+.+||..+|.
T Consensus       184 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~~li~~~l~~~p~  251 (286)
T cd06622         184 YTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI--------VDGDPPTL----PSGYSDDAQDFVAKCLNKIPN  251 (286)
T ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH--------hhcCCCCC----CcccCHHHHHHHHHHcccCcc
Confidence            467899999999999999999998643322221111100        00011112    122344667999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhc
Q 039745           83 ERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~  100 (127)
                      +||++.+++.|.|+....
T Consensus       252 ~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         252 RRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             cCCCHHHHhcChhhhhcc
Confidence            999999999999875543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.42  E-value=5.7e-13  Score=87.17  Aligned_cols=94  Identities=19%  Similarity=0.246  Sum_probs=56.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhc---------hHHHhhh-----cC-------------
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITAD---------ESARRSM-----VD-------------   54 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~-----~~-------------   54 (127)
                      |+.++||||+||+++|+++|+.||........ .....  ....         .+.+...     .+             
T Consensus       187 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (327)
T cd08227         187 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPR  264 (327)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcC
Confidence            67899999999999999999999864322111 11100  0000         0000000     00             


Q ss_pred             ----CcCcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           55 ----PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        55 ----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                          ..............+.+|+.+||..+|.+||++.++++|+|+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         265 PSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             ccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                00000011122346779999999999999999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.42  E-value=5.6e-14  Score=90.73  Aligned_cols=84  Identities=19%  Similarity=0.322  Sum_probs=58.0

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      ..+||||+||++.||++|++||... ......++.....        -..|.++    ........+|+.+|+..+|..|
T Consensus       201 ~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~--------~~~P~ip----~~ls~~a~~Fl~~C~~~~p~~R  267 (313)
T KOG0198|consen  201 RESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGRE--------DSLPEIP----DSLSDEAKDFLRKCFKRDPEKR  267 (313)
T ss_pred             ccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhcc--------CCCCCCC----cccCHHHHHHHHHHhhcCcccC
Confidence            4899999999999999999998642 1111112211111        1112222    2233456699999999999999


Q ss_pred             CCHHHHHHHHHHhhhcc
Q 039745           85 PSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        85 p~~~~~~~~~~~~~~~~  101 (127)
                      |++.+++.|++......
T Consensus       268 pta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  268 PTAEELLEHPFLKQNSI  284 (313)
T ss_pred             cCHHHHhhChhhhcccc
Confidence            99999999999766555

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.42  E-value=1.2e-12  Score=84.34  Aligned_cols=84  Identities=18%  Similarity=0.316  Sum_probs=57.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..||............   ..       ... +...    ...+..+.+++.+||..+
T Consensus       201 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~---~~-------~~~-~~~~----~~~~~~~~~li~~~l~~~  265 (291)
T cd05094         201 KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI---TQ-------GRV-LERP----RVCPKEVYDIMLGCWQRE  265 (291)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---hC-------CCC-CCCC----ccCCHHHHHHHHHHcccC
Confidence            35778999999999999998 99998544432221111   00       000 1111    112345779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++.+..+...
T Consensus       266 P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         266 PQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             hhhCcCHHHHHHHHHHHHhh
Confidence            99999999999998876543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.42  E-value=1.5e-12  Score=85.28  Aligned_cols=99  Identities=18%  Similarity=0.246  Sum_probs=59.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhc------hH----------HH-----h---------h
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITAD------ES----------AR-----R---------S   51 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~------~~----------~~-----~---------~   51 (127)
                      ++.++||||+||+++|+++|+.||........ ..........+      ..          ..     .         .
T Consensus       187 ~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (328)
T cd08226         187 YNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQT  266 (328)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccc
Confidence            56789999999999999999999864432211 11110000000      00          00     0         0


Q ss_pred             hcCCcCcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           52 MVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +................+.+|+.+||..+|.+||++.++++|.|+.....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         267 MTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             cccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence            00000111112234457889999999999999999999999999865544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.41  E-value=7e-13  Score=84.07  Aligned_cols=85  Identities=26%  Similarity=0.360  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++|+||+|++++++++|..|+.....  ..........        .....+....   ......+.+++..||..
T Consensus       175 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~li~~~l~~  243 (265)
T cd06605         175 DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI--------VNEPPPRLPS---GKFSPDFQDFVNLCLIK  243 (265)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHH--------hcCCCCCCCh---hhcCHHHHHHHHHHcCC
Confidence            367789999999999999999999854321  1111111100        0001111111   11334577999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|.+||++.+++.|.|+.
T Consensus       244 ~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         244 DPRERPSYKELLEHPFIK  261 (265)
T ss_pred             CchhCcCHHHHhhCchhh
Confidence            999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.41  E-value=2.3e-13  Score=87.12  Aligned_cols=80  Identities=21%  Similarity=0.292  Sum_probs=54.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|..||........  ..         .......+...   .......+.+|+.+||..+|.
T Consensus       203 ~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~--~~---------~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~  268 (282)
T cd06636         203 YDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA--LF---------LIPRNPPPKLK---SKKWSKKFIDFIEGCLVKNYL  268 (282)
T ss_pred             CCcccchhHHHHHHHHHHhCCCCccccCHHhh--hh---------hHhhCCCCCCc---ccccCHHHHHHHHHHhCCChh
Confidence            66789999999999999999999854332111  11         00011111111   112234677999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||++.+++.|.|+
T Consensus       269 ~Rp~~~ell~~~~~  282 (282)
T cd06636         269 SRPSTEQLLKHPFI  282 (282)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.41  E-value=4.4e-13  Score=84.53  Aligned_cols=82  Identities=22%  Similarity=0.344  Sum_probs=54.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+|++|+++++|++|+.|+............           .....+...  ........+.+++.+||..+|
T Consensus       175 ~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~P  241 (256)
T cd06612         175 GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI-----------PNKPPPTLS--DPEKWSPEFNDFVKKCLVKDP  241 (256)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh-----------ccCCCCCCC--chhhcCHHHHHHHHHHHhcCh
Confidence            3567899999999999999999998644322111111           000001110  111223467799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.+++.|.|+
T Consensus       242 ~~Rps~~~il~~~~~  256 (256)
T cd06612         242 EERPSAIQLLQHPFI  256 (256)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999998763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.41  E-value=2.3e-13  Score=90.51  Aligned_cols=96  Identities=21%  Similarity=0.249  Sum_probs=59.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhh--------hc-CCcCcc------cccHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRS--------MV-DPAVNK------ACLDESL   66 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~------~~~~~~~   66 (127)
                      ++.++||||+||+++||++|+.||..... ..+..+....+......+..        +. .+....      .......
T Consensus       182 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (372)
T cd07853         182 YTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQAT  261 (372)
T ss_pred             CCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCC
Confidence            67889999999999999999999964432 22333322211111111000        00 000000      0011123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ..+.+|+.+||..||.+||++.+++.|+|+..
T Consensus       262 ~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         262 HEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             HHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence            45779999999999999999999999999755

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=7.2e-13  Score=84.52  Aligned_cols=84  Identities=23%  Similarity=0.347  Sum_probs=57.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+|++|++++++++|..||...........+           .....+.....   .....+.+++.+||..+|
T Consensus       174 ~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~l~~~l~~~p  239 (274)
T cd06609         174 GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI-----------PKNNPPSLEGN---KFSKPFKDFVSLCLNKDP  239 (274)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHh-----------hhcCCCCCccc---ccCHHHHHHHHHHhhCCh
Confidence            3678999999999999999999998644422111111           11111111111   023356789999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++++++.|.++...
T Consensus       240 ~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         240 KERPSAKELLKHKFIKKA  257 (274)
T ss_pred             hhCcCHHHHhhChhhcCC
Confidence            999999999999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=5.1e-13  Score=86.12  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=56.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++||++|+.||...........+.   ..         ........    ...+.+|+.+||..+|.
T Consensus       175 ~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~---~~---------~~~~~~~~----~~~~~~li~~~l~~dp~  238 (291)
T cd05612         175 HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKIL---AG---------KLEFPRHL----DLYAKDLIKKLLVVDRT  238 (291)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hC---------CcCCCccC----CHHHHHHHHHHcCCCHH
Confidence            5778999999999999999999986544332222110   00         01111111    23567999999999999


Q ss_pred             CCCC-----HHHHHHHHHHhh
Q 039745           83 ERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~-----~~~~~~~~~~~~   98 (127)
                      +|++     +.+++.|.|+..
T Consensus       239 ~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         239 RRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HccCCccCCHHHHhcCccccC
Confidence            9995     999999999753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.41  E-value=1.3e-12  Score=86.64  Aligned_cols=97  Identities=18%  Similarity=0.245  Sum_probs=58.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHh-------hhcC--CcCc-------------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARR-------SMVD--PAVN-------------   58 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~-------------   58 (127)
                      .++.++||||+||+++||++|+.||..... .....++.......+....       ....  +...             
T Consensus       201 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (364)
T cd07875         201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLF  280 (364)
T ss_pred             CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccc
Confidence            467899999999999999999999964332 2222222211111110000       0000  0000             


Q ss_pred             ---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           59 ---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        59 ---~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                         ..........+.+|+.+||..||.+||++.++++|+|+..
T Consensus       281 ~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         281 PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             cccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence               0000111235679999999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.41  E-value=6.8e-13  Score=86.13  Aligned_cols=98  Identities=21%  Similarity=0.274  Sum_probs=60.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhc---------CCcCcc----cccHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMV---------DPAVNK----ACLDESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~----~~~~~~~~   67 (127)
                      .++.++||||+|++++||++|+.||..... .....+............+...         .+....    ........
T Consensus       181 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (309)
T cd07872         181 EYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDT  260 (309)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCH
Confidence            367889999999999999999999864433 2222222221111111111100         000000    00011233


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+.+++.+||..+|.+|+++.+++.|.|+...
T Consensus       261 ~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         261 EGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             HHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence            56799999999999999999999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.41  E-value=2.5e-14  Score=93.74  Aligned_cols=84  Identities=25%  Similarity=0.345  Sum_probs=60.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      |..++|+||+||++|-+++|.+||....... +...+....            =.+....+.....+..+|+..+|..||
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~------------y~f~p~~w~~Iseea~dlI~~mL~VdP  425 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGR------------YAFGPLQWDRISEEALDLINWMLVVDP  425 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCc------------ccccChhhhhhhHHHHHHHHHhhEeCc
Confidence            4468999999999999999999996443322 322221000            011122345566778899999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+|+++.++++|+|+..
T Consensus       426 ~~R~s~~eaL~hpW~~~  442 (475)
T KOG0615|consen  426 ENRPSADEALNHPWFKD  442 (475)
T ss_pred             ccCcCHHHHhcChhhhc
Confidence            99999999999999863

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.41  E-value=1.2e-12  Score=84.85  Aligned_cols=85  Identities=18%  Similarity=0.297  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|||++|+++||+++|..|+...........+   .        ....+...   .......+.+++.+||..+|
T Consensus       190 ~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~---~--------~~~~~~~~---~~~~~~~~~~li~~~l~~~p  255 (307)
T cd06607         190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---A--------QNDSPTLS---SNDWSDYFRNFVDSCLQKIP  255 (307)
T ss_pred             CCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH---h--------cCCCCCCC---chhhCHHHHHHHHHHhcCCh
Confidence            3677899999999999999999998644322211111   0        00011111   11223467899999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.+++.|+++....
T Consensus       256 ~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         256 QDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             hhCcCHHHHhcChhhcccC
Confidence            9999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.40  E-value=7.4e-13  Score=84.62  Aligned_cols=95  Identities=21%  Similarity=0.319  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcC---------Cc----CcccccHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVD---------PA----VNKACLDESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~   67 (127)
                      .++.++|+|++|++++++++|+.+|.... ......+.................         +.    ...........
T Consensus       175 ~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (283)
T cd05118         175 GYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASP  254 (283)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCH
Confidence            36778999999999999999999885433 222222222111111111111100         00    00011123345


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .+.+++..||..+|.+||++.+++.|.|+
T Consensus       255 ~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         255 QALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            78899999999999999999999998763

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.40  E-value=1.9e-12  Score=84.35  Aligned_cols=85  Identities=12%  Similarity=0.245  Sum_probs=58.4

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||||+++||+++ |..|+..........+..   .        .........    +...+.+++..||..+
T Consensus       187 ~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~---~--------~~~~~~~~~----~~~~~~~li~~cl~~~  251 (316)
T cd05108         187 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---K--------GERLPQPPI----CTIDVYMIMVKCWMID  251 (316)
T ss_pred             CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh---C--------CCCCCCCCC----CCHHHHHHHHHHccCC
Confidence            46788999999999999987 899986544333322221   0        000111111    2235678999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.+++.++......+
T Consensus       252 p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         252 ADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             hhhCcCHHHHHHHHHHHHcCC
Confidence            999999999999887665544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.40  E-value=3.2e-13  Score=85.70  Aligned_cols=77  Identities=26%  Similarity=0.494  Sum_probs=49.5

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||||++++|+++ |+.|+...........+   ...        ......    ......+.+++..||..+|
T Consensus       182 ~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~---~~~--------~~~~~~----~~~~~~~~~li~~C~~~~p  246 (259)
T PF07714_consen  182 YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL---KQG--------QRLPIP----DNCPKDIYSLIQQCWSHDP  246 (259)
T ss_dssp             ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH---HTT--------EETTSB----TTSBHHHHHHHHHHT-SSG
T ss_pred             ccccccccccccccccccccccccccccccccccccc---ccc--------ccceec----cchhHHHHHHHHHHcCCCh
Confidence            5779999999999999999 67887654433222111   111        001111    1123356699999999999


Q ss_pred             CCCCCHHHHHHHH
Q 039745           82 AERPSVEDVLWNL   94 (127)
Q Consensus        82 ~~Rp~~~~~~~~~   94 (127)
                      .+||++.++++.|
T Consensus       247 ~~RPs~~~i~~~L  259 (259)
T PF07714_consen  247 EKRPSFQEILQEL  259 (259)
T ss_dssp             GGS--HHHHHHHH
T ss_pred             hhCcCHHHHHhcC
Confidence            9999999998764

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.40  E-value=1.1e-12  Score=86.70  Aligned_cols=98  Identities=17%  Similarity=0.252  Sum_probs=59.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHh-------hhcC----------Cc-----Cc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARR-------SMVD----------PA-----VN   58 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~----------~~-----~~   58 (127)
                      .++.++|+||+||+++||++|+.||..... ......+............       ....          +.     ..
T Consensus       194 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (355)
T cd07874         194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF  273 (355)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccc
Confidence            367899999999999999999999864432 2222222221111110000       0000          00     00


Q ss_pred             ---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           59 ---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        59 ---~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                         ..........+.+|+.+||..+|.+||++.++++|+|+...
T Consensus       274 ~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         274 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             ccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence               00011122456799999999999999999999999987543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.40  E-value=1.5e-12  Score=83.22  Aligned_cols=79  Identities=18%  Similarity=0.350  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..||...........+.   .       ... +...    ......+.+++.+||..+
T Consensus       200 ~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~---~-------~~~-~~~~----~~~~~~~~~li~~~l~~~  264 (280)
T cd05049         200 KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT---Q-------GRL-LQRP----RTCPSEVYDIMLGCWKRD  264 (280)
T ss_pred             CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---c-------CCc-CCCC----CCCCHHHHHHHHHHcCCC
Confidence            46788999999999999998 999985443322211110   0       000 1111    112345679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       265 p~~Rp~~~eil~~l~  279 (280)
T cd05049         265 PQQRINIKDIHERLQ  279 (280)
T ss_pred             cccCCCHHHHHHHhh
Confidence            999999999988764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.40  E-value=1.5e-12  Score=84.05  Aligned_cols=85  Identities=20%  Similarity=0.294  Sum_probs=58.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..||...........+           ...........    ....+.+|+.+||..+
T Consensus       194 ~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~li~~~l~~~  258 (297)
T cd05089         194 VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL-----------PQGYRMEKPRN----CDDEVYELMRQCWRDR  258 (297)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----------hcCCCCCCCCC----CCHHHHHHHHHHcCCC
Confidence            36789999999999999997 99998654433221111           11111111111    2235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.++++.+..+....
T Consensus       259 p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         259 PYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             hhhCcCHHHHHHHHHHHHHhh
Confidence            999999999999887665533

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.40  E-value=1.3e-12  Score=82.65  Aligned_cols=81  Identities=16%  Similarity=0.304  Sum_probs=55.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.   ..        .....    .......+.+++.+||..+
T Consensus       174 ~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~----~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         174 KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE---SG--------ERLPR----PEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH---cC--------CcCCC----CCCCCHHHHHHHHHHhcCC
Confidence            46778999999999999998 999986544333222221   00        00011    1122346679999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.+++..+...
T Consensus       239 p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         239 PEDRPTFSELESTFRRD  255 (257)
T ss_pred             hhhCcCHHHHHHHHHhc
Confidence            99999999999877643

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.40  E-value=9.9e-13  Score=82.95  Aligned_cols=79  Identities=22%  Similarity=0.358  Sum_probs=54.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++++++|+.||...........+          .... .+...    ......+.+++.+||..+|
T Consensus       177 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----------~~~~-~~~~~----~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08529         177 PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKI----------IRGV-FPPVS----QMYSQQLAQLIDQCLTKDY  241 (256)
T ss_pred             CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----------HcCC-CCCCc----cccCHHHHHHHHHHccCCc
Confidence            3567899999999999999999998655432221111          0011 11111    1223456799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      ++||++.+++++.+
T Consensus       242 ~~Rp~~~~ll~~~~  255 (256)
T cd08529         242 RQRPDTFQLLRNPS  255 (256)
T ss_pred             ccCcCHHHHhhCCC
Confidence            99999999998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=5.7e-13  Score=84.40  Aligned_cols=80  Identities=18%  Similarity=0.292  Sum_probs=54.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|+.||............          ......+...    ......+.+++..||..+|.
T Consensus       184 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~  249 (263)
T cd06625         184 YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI----------ATQPTNPQLP----SHVSPDARNFLRRTFVENAK  249 (263)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH----------hccCCCCCCC----ccCCHHHHHHHHHHhhcCcc
Confidence            567899999999999999999998543322111111          0000111111    12233567899999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||++.+++.|.|+
T Consensus       250 ~Rpt~~~ll~~~~~  263 (263)
T cd06625         250 KRPSAEELLRHFFV  263 (263)
T ss_pred             cCCCHHHHhhCCCC
Confidence            99999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.40  E-value=1.5e-12  Score=82.81  Aligned_cols=80  Identities=19%  Similarity=0.324  Sum_probs=55.0

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++|+++ |..||............   ...        ......    ......+.+++.+||..+|
T Consensus       192 ~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~---~~~--------~~~~~~----~~~~~~~~~li~~~l~~~p  256 (273)
T cd05035         192 YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL---RHG--------NRLKQP----EDCLDELYDLMYSCWRADP  256 (273)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HcC--------CCCCCC----cCCCHHHHHHHHHHcCCCh
Confidence            5678999999999999999 88888544332221111   110        011111    1223467799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.+++.++..+
T Consensus       257 ~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         257 KDRPTFTKLREVLENI  272 (273)
T ss_pred             hhCcCHHHHHHHHHhh
Confidence            9999999999988653

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.40  E-value=1.6e-12  Score=83.08  Aligned_cols=81  Identities=22%  Similarity=0.337  Sum_probs=55.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|..|+...........+           .....+...    ......+.+++.+||..+|.
T Consensus       178 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~p~  242 (277)
T cd06642         178 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI-----------PKNSPPTLE----GQYSKPFKEFVEACLNKDPR  242 (277)
T ss_pred             CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh-----------hcCCCCCCC----cccCHHHHHHHHHHccCCcc
Confidence            567899999999999999999998533222111110           000111111    12234567999999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      +||++.+++.|.++..
T Consensus       243 ~Rp~~~~il~~~~~~~  258 (277)
T cd06642         243 FRPTAKELLKHKFITR  258 (277)
T ss_pred             cCcCHHHHHHhHHHHH
Confidence            9999999999998654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.39  E-value=1.2e-12  Score=83.95  Aligned_cols=91  Identities=20%  Similarity=0.324  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-----HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHh
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-----LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRC   76 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   76 (127)
                      .++.++|+||+|++++++++|+.||.......     ...+..        .....................+.+|+.+|
T Consensus       178 ~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~li~~~  249 (284)
T cd06620         178 KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD--------LLQQIVQEPPPRLPSSDFPEDLRDFVDAC  249 (284)
T ss_pred             CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH--------HHHHHhhccCCCCCchhcCHHHHHHHHHH
Confidence            45678999999999999999999986432210     000110        00111111110000112334677999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhhc
Q 039745           77 LLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        77 l~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |..+|.+||++.++++++++....
T Consensus       250 l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         250 LLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             hcCCcccCcCHHHHhcCccccccc
Confidence            999999999999999998876643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.39  E-value=8.2e-13  Score=85.87  Aligned_cols=29  Identities=21%  Similarity=0.313  Sum_probs=26.2

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .+.+|+.+||..||.+|||+.++++|+|+
T Consensus       289 ~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         289 KVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            46689999999999999999999998874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.39  E-value=2e-12  Score=83.60  Aligned_cols=84  Identities=18%  Similarity=0.266  Sum_probs=56.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|+||++++++++|+.||............  ...         ..+..  .........+.+++.+||..+|+
T Consensus       193 ~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~--~~~---------~~~~~--~~~~~~~~~l~~li~~~l~~~p~  259 (296)
T cd06654         193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI--ATN---------GTPEL--QNPEKLSAIFRDFLNRCLDMDVE  259 (296)
T ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH--hcC---------CCCCC--CCccccCHHHHHHHHHHCcCCcc
Confidence            567899999999999999999998644322111111  000         00110  01112234567899999999999


Q ss_pred             CCCCHHHHHHHHHHhhh
Q 039745           83 ERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~   99 (127)
                      .||++.+++.|.++...
T Consensus       260 ~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         260 KRGSAKELLQHQFLKIA  276 (296)
T ss_pred             cCcCHHHHhhChhhhcc
Confidence            99999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.39  E-value=3.2e-12  Score=81.20  Aligned_cols=83  Identities=18%  Similarity=0.261  Sum_probs=55.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|..|+........ .+..        .+.....+...   .......+.+++.+||..+|.
T Consensus       183 ~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-~~~~--------~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~  250 (267)
T cd08228         183 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-SLCQ--------KIEQCDYPPLP---TEHYSEKLRELVSMCIYPDPD  250 (267)
T ss_pred             CCchhhHHHHHHHHHHHhcCCCCCccccccHH-HHHH--------HHhcCCCCCCC---hhhcCHHHHHHHHHHCCCCcc
Confidence            56789999999999999999999854332211 1111        11111111111   122334677999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +||++.++++.+..+
T Consensus       251 ~Rp~~~~vl~~~~~~  265 (267)
T cd08228         251 QRPDIGYVHQIAKQM  265 (267)
T ss_pred             cCcCHHHHHHHHHHh
Confidence            999999999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.39  E-value=2e-12  Score=85.67  Aligned_cols=98  Identities=17%  Similarity=0.252  Sum_probs=58.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHH-------Hhhhc--CCcCcc------------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESA-------RRSMV--DPAVNK------------   59 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~------------   59 (127)
                      .++.++||||+|+++++|++|+.||...+. .................       .....  .+....            
T Consensus       198 ~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (359)
T cd07876         198 GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIF  277 (359)
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccc
Confidence            467889999999999999999999964332 22222221111110000       00000  000000            


Q ss_pred             ----cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           60 ----ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        60 ----~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                          .........+.+|+.+||..+|.+||++.+++.|+|+...
T Consensus       278 ~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  321 (359)
T cd07876         278 PSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW  321 (359)
T ss_pred             ccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence                0000112457799999999999999999999999997653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.39  E-value=1.4e-12  Score=85.61  Aligned_cols=82  Identities=17%  Similarity=0.302  Sum_probs=55.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .|+.++||||||+++|||++ |..||....... .....   ..        -.......    .....+.+++.+||..
T Consensus       252 ~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~---~~--------~~~~~~~~----~~~~~l~~li~~cl~~  316 (338)
T cd05102         252 VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRL---KD--------GTRMRAPE----NATPEIYRIMLACWQG  316 (338)
T ss_pred             CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---hc--------CCCCCCCC----CCCHHHHHHHHHHccC
Confidence            46789999999999999997 999986433211 11111   00        00111111    1233567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|.+||++.++++.+..+.
T Consensus       317 dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         317 DPKERPTFSALVEILGDLL  335 (338)
T ss_pred             ChhhCcCHHHHHHHHHHHH
Confidence            9999999999999887554

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.39  E-value=5.1e-13  Score=92.15  Aligned_cols=82  Identities=16%  Similarity=0.246  Sum_probs=61.3

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|++||.+++|+.||+..+...+...++.....                .+.....++.+|+.+++..||..
T Consensus       190 G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~----------------MPs~Is~eaQdLLr~ml~VDp~~  253 (786)
T KOG0588|consen  190 GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE----------------MPSNISSEAQDLLRRMLDVDPST  253 (786)
T ss_pred             CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc----------------CCCcCCHHHHHHHHHHhccCccc
Confidence            46899999999999999999999977766554444211111                11222335569999999999999


Q ss_pred             CCCHHHHHHHHHHhhhcc
Q 039745           84 RPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+++++++|+|......
T Consensus       254 RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  254 RITTEEILKHPFLSGYTS  271 (786)
T ss_pred             cccHHHHhhCchhhcCCC
Confidence            999999999999765433

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.39  E-value=9.6e-13  Score=84.65  Aligned_cols=80  Identities=19%  Similarity=0.284  Sum_probs=54.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||+|++++|+++|+.||..... .....+.            ....+....  .......+.+++.+||..+|
T Consensus       210 ~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~------------~~~~~~~~~--~~~~~~~l~~li~~~l~~~p  275 (291)
T cd06639         210 YDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP------------RNPPPTLLH--PEKWCRSFNHFISQCLIKDF  275 (291)
T ss_pred             cCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHh------------cCCCCCCCc--ccccCHHHHHHHHHHhhcCh
Confidence            57899999999999999999999864432 1111110            000111110  11122357799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      ++||++.+++.|.++
T Consensus       276 ~~Rps~~~il~~~~~  290 (291)
T cd06639         276 EARPSVTHLLEHPFI  290 (291)
T ss_pred             hhCcCHHHHhcCccc
Confidence            999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.39  E-value=2.2e-12  Score=82.10  Aligned_cols=79  Identities=24%  Similarity=0.390  Sum_probs=54.2

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||+|++++|+++ |+.||...........+.   ..        ......    ......+.+++.+||..+|
T Consensus       191 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~----~~~~~~~~~li~~~l~~~p  255 (272)
T cd05075         191 YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR---QG--------NRLKQP----PDCLDGLYSLMSSCWLLNP  255 (272)
T ss_pred             cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---cC--------CCCCCC----CCCCHHHHHHHHHHcCCCc
Confidence            5778999999999999999 788886543332222110   00        001111    1122356799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      ++||++.++++++..
T Consensus       256 ~~Rps~~~l~~~l~~  270 (272)
T cd05075         256 KDRPSFETLRCELEK  270 (272)
T ss_pred             ccCcCHHHHHHHHHh
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.39  E-value=1.1e-12  Score=91.39  Aligned_cols=82  Identities=17%  Similarity=0.293  Sum_probs=59.1

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      ++|+.++|+|+||+.+|||++ |+.||-.-...++...+               |....-..+..|...+.++|..||..
T Consensus       290 ~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i---------------D~~erLpRPk~csedIY~imk~cWah  354 (1039)
T KOG0199|consen  290 RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI---------------DAGERLPRPKYCSEDIYQIMKNCWAH  354 (1039)
T ss_pred             ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc---------------cccccCCCCCCChHHHHHHHHHhccC
Confidence            468999999999999999999 78888544433332222               11111112345667889999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|++||+|.++.+.+...
T Consensus       355 ~paDRptFsair~~~~l~  372 (1039)
T KOG0199|consen  355 NPADRPTFSAIREDLVLA  372 (1039)
T ss_pred             CccccccHHHHHHhHHHH
Confidence            999999999997655443

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.39  E-value=1e-12  Score=82.95  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=54.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++++++|+.||...........+   .       .... +..    .......+.+++.+||..+|
T Consensus       178 ~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~---~-------~~~~-~~~----~~~~~~~~~~li~~~l~~~p  242 (257)
T cd08223         178 PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRI---I-------EGKL-PPM----PKDYSPELGELIATMLSKRP  242 (257)
T ss_pred             CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---H-------hcCC-CCC----ccccCHHHHHHHHHHhccCc
Confidence            3567899999999999999999998644422211111   0       0000 111    12233467799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.+++.|.|+
T Consensus       243 ~~Rp~~~~~l~~~~~  257 (257)
T cd08223         243 EKRPSVKSILRQPYI  257 (257)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.38  E-value=8.2e-13  Score=84.94  Aligned_cols=100  Identities=19%  Similarity=0.260  Sum_probs=72.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhhcCCcC--------------cccccHH-H
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSMVDPAV--------------NKACLDE-S   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~-~   65 (127)
                      .|+..+|+||+||++.|++.+++.| +.....++..++..++.+.....+.......              ...+... .
T Consensus       254 tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~l  333 (419)
T KOG0663|consen  254 TYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSL  333 (419)
T ss_pred             ccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhcccccc
Confidence            3889999999999999999999998 5667788888887766654433222211110              0011111 2


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .....+|+..+|.+||.+|.|+.+.++|-||.....
T Consensus       334 se~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  334 SEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL  369 (419)
T ss_pred             chhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence            246779999999999999999999999999876433

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.38  E-value=3.9e-12  Score=80.89  Aligned_cols=79  Identities=18%  Similarity=0.383  Sum_probs=53.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..||...........+.   ..        .....    .......+.+++.+||..+
T Consensus       189 ~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~---~~--------~~~~~----~~~~~~~~~~li~~~l~~~  253 (269)
T cd05044         189 KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT---AG--------GRLQK----PENCPDKIYQLMTNCWAQD  253 (269)
T ss_pred             CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh---cC--------CccCC----cccchHHHHHHHHHHcCCC
Confidence            46788999999999999998 998886433222211110   00        00011    1122346679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       254 p~~Rp~~~~i~~~l~  268 (269)
T cd05044         254 PSERPTFDRIQEILQ  268 (269)
T ss_pred             cccCCCHHHHHHHHh
Confidence            999999999988764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.38  E-value=4.4e-13  Score=87.43  Aligned_cols=81  Identities=19%  Similarity=0.261  Sum_probs=57.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+||+++++++|+.||...........+   ..         .....+.    .....+.+|+.+||..+|
T Consensus       172 ~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i---~~---------~~~~~~~----~~~~~~~~li~~~l~~dP  235 (318)
T cd05570         172 PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI---LE---------DEVRYPR----WLSKEAKSILKSFLTKNP  235 (318)
T ss_pred             CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHH---Hc---------CCCCCCC----cCCHHHHHHHHHHccCCH
Confidence            4678999999999999999999999654433222111   00         0011111    122356799999999999


Q ss_pred             CCCCCH-----HHHHHHHHHhh
Q 039745           82 AERPSV-----EDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~-----~~~~~~~~~~~   98 (127)
                      .+||++     .+++.|.|+..
T Consensus       236 ~~R~s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         236 EKRLGCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCC
Confidence            999999     99999987644

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.38  E-value=1.7e-12  Score=83.85  Aligned_cols=86  Identities=16%  Similarity=0.267  Sum_probs=57.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++++++|+.||...........+  ....         .+...  .+......+.+++.+||..+|.
T Consensus       192 ~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~--~~~~---------~~~~~--~~~~~~~~~~~li~~~l~~dp~  258 (296)
T cd06655         192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI--ATNG---------TPELQ--NPEKLSPIFRDFLNRCLEMDVE  258 (296)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhcC---------CcccC--CcccCCHHHHHHHHHHhhcChh
Confidence            567899999999999999999998654432111111  0000         00000  0111223566899999999999


Q ss_pred             CCCCHHHHHHHHHHhhhcc
Q 039745           83 ERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +||++.+++.|.|+....+
T Consensus       259 ~Rpt~~~il~~~~~~~~~~  277 (296)
T cd06655         259 KRGSAKELLQHPFLKLAKP  277 (296)
T ss_pred             hCCCHHHHhhChHhhhccc
Confidence            9999999999999865443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=9.8e-13  Score=83.63  Aligned_cols=79  Identities=20%  Similarity=0.331  Sum_probs=53.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+|++|++++++++|..||...... ....+.            ....+...  ........+.+|+.+||..+|
T Consensus       195 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~------------~~~~~~~~--~~~~~~~~~~~li~~~l~~dp  260 (275)
T cd06608         195 YDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIP------------RNPPPTLK--SPENWSKKFNDFISECLIKNY  260 (275)
T ss_pred             ccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhh------------ccCCCCCC--chhhcCHHHHHHHHHHhhcCh
Confidence            567899999999999999999998543221 111111            00011111  111223467799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.+++.|.|
T Consensus       261 ~~Rpt~~~ll~~~~  274 (275)
T cd06608         261 EQRPFMEELLEHPF  274 (275)
T ss_pred             hhCcCHHHHhcCCC
Confidence            99999999998875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.38  E-value=2.2e-12  Score=82.67  Aligned_cols=79  Identities=18%  Similarity=0.288  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..|+...........+   ....        ....    .......+.+|+..||+.+
T Consensus       202 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i---~~~~--------~~~~----~~~~~~~~~~li~~cl~~~  266 (283)
T cd05091         202 KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI---RNRQ--------VLPC----PDDCPAWVYTLMLECWNEF  266 (283)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HcCC--------cCCC----CCCCCHHHHHHHHHHhCCC
Confidence            46778999999999999998 77787654433222111   0000        0111    1223345679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       267 p~~RP~~~~i~~~l~  281 (283)
T cd05091         267 PSRRPRFKDIHSRLR  281 (283)
T ss_pred             cccCCCHHHHHHHhh
Confidence            999999999998774

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.38  E-value=2.9e-12  Score=81.45  Aligned_cols=80  Identities=15%  Similarity=0.294  Sum_probs=54.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.           .......    .......+.+++.+||..+
T Consensus       186 ~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~-----------~~~~~~~----~~~~~~~~~~li~~c~~~~  250 (268)
T cd05063         186 KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIN-----------DGFRLPA----PMDCPSAVYQLMLQCWQQD  250 (268)
T ss_pred             CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh-----------cCCCCCC----CCCCCHHHHHHHHHHcCCC
Confidence            35678999999999999987 999985443322221110           0000001    1122346679999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.++++.+..
T Consensus       251 p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         251 RARRPRFVDIVNLLDK  266 (268)
T ss_pred             cccCcCHHHHHHHHHh
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.38  E-value=1.3e-12  Score=84.79  Aligned_cols=98  Identities=19%  Similarity=0.275  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhch----------------------HHHhhhcCCcCcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADE----------------------SARRSMVDPAVNK   59 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~   59 (127)
                      .++.++|+||+|++++++++|+.||....................                      ...........+.
T Consensus       174 ~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (308)
T cd06615         174 HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPK  253 (308)
T ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCcc
Confidence            366789999999999999999999854433222222110000000                      0000000000000


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        60 ~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .........+.+|+.+||..+|++||++.+++.|+|+...
T Consensus       254 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         254 LPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             CcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence            0000123357799999999999999999999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=1.9e-12  Score=81.95  Aligned_cols=82  Identities=17%  Similarity=0.281  Sum_probs=54.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++||++|+.|+.............         ......+...  ........+.+++.+||..+|
T Consensus       180 ~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p  248 (262)
T cd06613         180 GYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS---------KSNFPPPKLK--DKEKWSPVFHDFIKKCLTKDP  248 (262)
T ss_pred             CcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---------hccCCCcccc--chhhhhHHHHHHHHHHcCCCh
Confidence            46778999999999999999999986443222111110         0000011111  112234467899999999999


Q ss_pred             CCCCCHHHHHHHH
Q 039745           82 AERPSVEDVLWNL   94 (127)
Q Consensus        82 ~~Rp~~~~~~~~~   94 (127)
                      ..||++.+++.|.
T Consensus       249 ~~Rpt~~~il~~~  261 (262)
T cd06613         249 KKRPTATKLLQHP  261 (262)
T ss_pred             hhCCCHHHHhcCC
Confidence            9999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.38  E-value=8.2e-13  Score=85.43  Aligned_cols=97  Identities=21%  Similarity=0.276  Sum_probs=58.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcC---------CcCcccc----cHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVD---------PAVNKAC----LDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~~~~~~   68 (127)
                      ++.++||||+|++++||++|+.||........ ..+............+....         +.....+    .......
T Consensus       182 ~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (301)
T cd07873         182 YSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSD  261 (301)
T ss_pred             CccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHH
Confidence            56789999999999999999999865443222 22211111111111111100         1000000    0112335


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +.+|+.+||..+|.+||++.+++.|.|+...
T Consensus       262 ~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         262 GAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            6799999999999999999999999998543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.38  E-value=8.5e-13  Score=83.33  Aligned_cols=80  Identities=21%  Similarity=0.313  Sum_probs=54.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++++++|+.|+............          +.... +...    ......+.+++.+||..+|
T Consensus       177 ~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~----------~~~~~-~~~~----~~~~~~~~~li~~~l~~~p  241 (256)
T cd08218         177 PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI----------IRGSY-PPVS----SHYSYDLRNLVSQLFKRNP  241 (256)
T ss_pred             CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH----------hcCCC-CCCc----ccCCHHHHHHHHHHhhCCh
Confidence            3567899999999999999999998644322111111          00000 1111    1223456799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.+++.|.|+
T Consensus       242 ~~Rp~~~~vl~~~~~  256 (256)
T cd08218         242 RDRPSVNSILEKNFI  256 (256)
T ss_pred             hhCcCHHHHhhCcCC
Confidence            999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.38  E-value=8.7e-13  Score=84.49  Aligned_cols=94  Identities=19%  Similarity=0.223  Sum_probs=55.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchH------HHhhh---cCC---cCcccccHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADES------ARRSM---VDP---AVNKACLDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~------~~~~~---~~~---~~~~~~~~~~~~~~   69 (127)
                      ++.++|+||+|++++|+++|+.||.... .................      ..+..   ...   .............+
T Consensus       178 ~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (284)
T cd07860         178 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDG  257 (284)
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHH
Confidence            4678999999999999999999985432 22222222211111000      00000   000   00000001122356


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .+++.+||..+|.+||++.+++.|.||
T Consensus       258 ~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         258 RDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            789999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.37  E-value=1.9e-12  Score=89.08  Aligned_cols=80  Identities=19%  Similarity=0.294  Sum_probs=55.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|+++||+++|+.||...........+          +.....+ ..    ......+.+++.+||..+|
T Consensus       221 ~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~----------~~~~~~~-~~----~~~~~~l~~li~~~L~~dP  285 (496)
T PTZ00283        221 PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT----------LAGRYDP-LP----PSISPEMQEIVTALLSSDP  285 (496)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----------hcCCCCC-CC----CCCCHHHHHHHHHHcccCh
Confidence            4778999999999999999999999654432221111          0000111 11    1223456799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.+++.|+++
T Consensus       286 ~~RPs~~ell~~p~~  300 (496)
T PTZ00283        286 KRRPSSSKLLNMPIC  300 (496)
T ss_pred             hhCcCHHHHHhCHHH
Confidence            999999999998764

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.37  E-value=1.8e-13  Score=89.46  Aligned_cols=81  Identities=15%  Similarity=0.257  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||+++||++|..||...........+.   .         .....+..    ....+.+|+.+||..+|
T Consensus       171 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~---~---------~~~~~p~~----~~~~~~~li~~~L~~dP  234 (323)
T cd05571         171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---M---------EEIRFPRT----LSPEAKSLLAGLLKKDP  234 (323)
T ss_pred             CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH---c---------CCCCCCCC----CCHHHHHHHHHHccCCH
Confidence            46789999999999999999999996554433322220   0         01111111    22356799999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+|+     ++.++++|.|+..
T Consensus       235 ~~R~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         235 KQRLGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCC
Confidence            9999     8999999988743

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.37  E-value=1.3e-12  Score=84.56  Aligned_cols=98  Identities=18%  Similarity=0.241  Sum_probs=58.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh--HHHHHHHHHHHHhhchHHHhhh-----cCCc-Cc---ccccH------HH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVITADESARRSM-----VDPA-VN---KACLD------ES   65 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~---~~~~~------~~   65 (127)
                      ++.++||||+||+++||++|..||....  ...+..+...............     ..+. ..   .....      ..
T Consensus       181 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (303)
T cd07869         181 YSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSY  260 (303)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCC
Confidence            5778999999999999999999996432  1222222221111111000000     0000 00   00000      01


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      ...+.+|+.+||+.+|.+|+++.+++.|.||....
T Consensus       261 ~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         261 VNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             ChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            13567899999999999999999999999986543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.37  E-value=3.3e-12  Score=81.74  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=56.4

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++|+++ |+.||...........+.   .        .......    ......+.+++.+||..+|
T Consensus       196 ~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~--------~~~~~~~----~~~~~~~~~li~~~l~~~p  260 (280)
T cd05043         196 YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK---D--------GYRLAQP----INCPDELFAVMACCWALDP  260 (280)
T ss_pred             CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH---c--------CCCCCCC----CcCCHHHHHHHHHHcCCCh
Confidence            5678999999999999998 999986544332222211   0        0001111    1123456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      ++||++.+++..+..+.
T Consensus       261 ~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         261 EERPSFSQLVQCLTDFH  277 (280)
T ss_pred             hhCCCHHHHHHHHHHHH
Confidence            99999999999887654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.37  E-value=2e-12  Score=85.04  Aligned_cols=83  Identities=18%  Similarity=0.344  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+||+++|+++ |..||..... ..+...+           .........    ......+.+++.+||+.
T Consensus       251 ~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~l~~~cl~~  315 (337)
T cd05054         251 VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL-----------KEGTRMRAP----EYATPEIYSIMLDCWHN  315 (337)
T ss_pred             CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH-----------hccCCCCCC----ccCCHHHHHHHHHHccC
Confidence            36778999999999999997 9988854321 1111111           000111111    11223567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.++++++....+
T Consensus       316 ~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         316 NPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             ChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999986554

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.37  E-value=2.7e-12  Score=83.66  Aligned_cols=85  Identities=20%  Similarity=0.346  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++|+.||....... ...+..   .         ..+...   .......+.+++.+||+.+
T Consensus       200 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~---~---------~~~~~~---~~~~~~~l~~li~~~l~~~  264 (317)
T cd06635         200 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ---N---------ESPTLQ---SNEWSDYFRNFVDSCLQKI  264 (317)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh---c---------cCCCCC---CccccHHHHHHHHHHccCC
Confidence            46778999999999999999999985433221 111110   0         001111   1112235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.+++.|+++.....
T Consensus       265 p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         265 PQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             cccCcCHHHHHhChhhhccCc
Confidence            999999999999998766544

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.37  E-value=1.3e-12  Score=83.03  Aligned_cols=79  Identities=13%  Similarity=0.212  Sum_probs=54.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+|++|++++++++|..||.......  .+.         .......+....    .....+.+++.+||..+|
T Consensus       188 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~---------~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p  252 (267)
T cd06628         188 SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AIF---------KIGENASPEIPS----NISSEAIDFLEKTFEIDH  252 (267)
T ss_pred             CCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HHH---------HHhccCCCcCCc----ccCHHHHHHHHHHccCCc
Confidence            35678999999999999999999986433211  111         111111222222    223456799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.++++|.+
T Consensus       253 ~~Rp~~~~il~~~~  266 (267)
T cd06628         253 NKRPTAAELLKHPF  266 (267)
T ss_pred             hhCcCHHHHhhCCC
Confidence            99999999998865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.37  E-value=1.2e-12  Score=83.86  Aligned_cols=94  Identities=22%  Similarity=0.231  Sum_probs=55.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCC-chhH-HHHHHHHHHHHhhchHHHh---hhcCC----cCcc-----cccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKS-RKEV-DLLKNQLQAVITADESARR---SMVDP----AVNK-----ACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~-~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~-----~~~~~~~~~   68 (127)
                      ++.++|+||+|++++||++|..|+. .... ..+..+.............   ...+.    ....     .........
T Consensus       177 ~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd07839         177 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNST  256 (284)
T ss_pred             cCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHH
Confidence            5788999999999999999888853 2222 2222222111111110000   00000    0000     001112346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +.+++.+||..+|.+||++.+++.|+|+
T Consensus       257 ~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         257 GRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             HHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            6799999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.37  E-value=3.8e-12  Score=80.99  Aligned_cols=79  Identities=14%  Similarity=0.246  Sum_probs=53.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+   ..        ......    +...+..+.+++..||..+
T Consensus       184 ~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~---~~--------~~~~~~----~~~~~~~~~~li~~c~~~~  248 (266)
T cd05064         184 HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV---ED--------GFRLPA----PRNCPNLLHQLMLDCWQKE  248 (266)
T ss_pred             CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH---HC--------CCCCCC----CCCCCHHHHHHHHHHcCCC
Confidence            46789999999999999775 99998654432221111   00        000111    1223345678999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++++.+.
T Consensus       249 p~~RP~~~~i~~~l~  263 (266)
T cd05064         249 RGERPRFSQIHSILS  263 (266)
T ss_pred             chhCCCHHHHHHHHH
Confidence            999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.36  E-value=1.5e-12  Score=83.42  Aligned_cols=95  Identities=21%  Similarity=0.303  Sum_probs=56.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchH---------HHhhhcCCcCcccc-----cHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADES---------ARRSMVDPAVNKAC-----LDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-----~~~~~   66 (127)
                      .++.++|+||+|++++||++|+.||.... .+.+..+..........         .......+......     .....
T Consensus       177 ~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (286)
T cd07847         177 QYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNIS  256 (286)
T ss_pred             CcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCC
Confidence            36778999999999999999999986433 22222222111110000         00000001100000     01123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ..+.+|+.+||..+|++||++.+++.|.||
T Consensus       257 ~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         257 SPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             HHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            467799999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.36  E-value=1.7e-12  Score=83.54  Aligned_cols=81  Identities=19%  Similarity=0.334  Sum_probs=56.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||||++++|+++ |..|+.............   ..        .....    +......+.+|+.+||..+
T Consensus       210 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~----~~~~~~~~~~li~~~l~~~  274 (293)
T cd05053         210 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK---EG--------YRMEK----PQNCTQELYHLMRDCWHEV  274 (293)
T ss_pred             CcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH---cC--------CcCCC----CCCCCHHHHHHHHHHcccC
Confidence            46778999999999999997 888886544333222210   00        00111    1122346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.+++.++..+
T Consensus       275 p~~Rps~~eil~~l~~~  291 (293)
T cd05053         275 PSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             cccCcCHHHHHHHHHHh
Confidence            99999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.36  E-value=2.2e-12  Score=81.34  Aligned_cols=85  Identities=15%  Similarity=0.229  Sum_probs=64.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+..+|+|++|+++|.++.|.+||.......+..++..            ..=.+..+.+.+......+|+.+||+.||.
T Consensus       205 Ys~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Ime------------GkyqF~speWadis~~~KdLIsrlLqVdp~  272 (411)
T KOG0599|consen  205 YSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIME------------GKYQFRSPEWADISATVKDLISRLLQVDPT  272 (411)
T ss_pred             ccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh------------cccccCCcchhhccccHHHHHHHHHeeCch
Confidence            78899999999999999999999976554433333311            111233344566666788999999999999


Q ss_pred             CCCCHHHHHHHHHHhhh
Q 039745           83 ERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.++++++.|+||+.-
T Consensus       273 ~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  273 KRITAKEALAHPFFIQI  289 (411)
T ss_pred             hcccHHHHhcChHHHHH
Confidence            99999999999998554

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.36  E-value=2.1e-12  Score=82.12  Aligned_cols=80  Identities=18%  Similarity=0.273  Sum_probs=53.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++++++|+.|+............ .       ... ...+...    ......+.+++.+||..+|.
T Consensus       188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~-~-------~~~-~~~~~~~----~~~~~~~~~li~~~l~~~p~  254 (268)
T cd06624         188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK-V-------GMF-KIHPEIP----ESLSAEAKNFILRCFEPDPD  254 (268)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh-h-------hhh-ccCCCCC----cccCHHHHHHHHHHcCCCch
Confidence            567899999999999999999998543221111110 0       000 0011111    22234567999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.+++.|+|
T Consensus       255 ~Rpt~~~ll~~~~  267 (268)
T cd06624         255 KRASAHDLLQDPF  267 (268)
T ss_pred             hCCCHHHHHhCCC
Confidence            9999999999876

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.36  E-value=9.2e-13  Score=84.37  Aligned_cols=94  Identities=19%  Similarity=0.297  Sum_probs=55.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHH---------HhhhcCCcCc---ccccHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESA---------RRSMVDPAVN---KACLDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~   69 (127)
                      ++.++|+||+|++++++++|+.||.... ..................         .....+....   ..........+
T Consensus       179 ~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (285)
T cd07861         179 YSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDG  258 (285)
T ss_pred             cCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHH
Confidence            5678999999999999999999986432 222222221111110000         0000000000   00001122356


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .+++.+||..+|.+||++.+++.|.|+
T Consensus       259 ~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         259 LDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            689999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=2.3e-12  Score=82.41  Aligned_cols=84  Identities=20%  Similarity=0.339  Sum_probs=56.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|+++|++++|+.||........  +..         ......+...  ........+.+++.+||..+|.
T Consensus       185 ~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~--~~~---------~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~  251 (280)
T cd06611         185 YDYKADIWSLGITLIELAQMEPPHHELNPMRV--LLK---------ILKSEPPTLD--QPSKWSSSFNDFLKSCLVKDPD  251 (280)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCcccCCHHHH--HHH---------HhcCCCCCcC--CcccCCHHHHHHHHHHhccChh
Confidence            45689999999999999999999865433221  111         0111111110  0111223567899999999999


Q ss_pred             CCCCHHHHHHHHHHhhh
Q 039745           83 ERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~   99 (127)
                      +||++.++++|.|+...
T Consensus       252 ~Rps~~~il~~~~~~~~  268 (280)
T cd06611         252 DRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             hCcCHHHHhcChhhccc
Confidence            99999999999987543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.36  E-value=2.6e-12  Score=81.26  Aligned_cols=78  Identities=21%  Similarity=0.258  Sum_probs=54.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||...........+           .....+...    ......+.+++.+||..+|.
T Consensus       187 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~l~~~~l~~~p~  251 (265)
T cd08217         187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI-----------KEGKFRRIP----YRYSSELNEVIKSMLNVDPD  251 (265)
T ss_pred             CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH-----------hcCCCCCCc----cccCHHHHHHHHHHccCCcc
Confidence            567899999999999999999998655432222111           011111111    22334677999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.++++|++
T Consensus       252 ~Rp~~~~il~~~~  264 (265)
T cd08217         252 KRPSTEELLQLPL  264 (265)
T ss_pred             cCCCHHHHhhCCC
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.36  E-value=1.4e-12  Score=82.37  Aligned_cols=79  Identities=16%  Similarity=0.298  Sum_probs=54.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++|+++|..|+............          ......+ ..    ......+.+++.+||..+|
T Consensus       178 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~----------~~~~~~~-~~----~~~~~~~~~~i~~~l~~~p  242 (257)
T cd08225         178 PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI----------CQGYFAP-IS----PNFSRDLRSLISQLFKVSP  242 (257)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH----------hcccCCC-CC----CCCCHHHHHHHHHHhccCh
Confidence            3567899999999999999999998644332211111          0011111 11    1122356799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.+++.|.|
T Consensus       243 ~~Rpt~~~ll~~~~  256 (257)
T cd08225         243 RDRPSITSILKRPF  256 (257)
T ss_pred             hhCcCHHHHhhCCC
Confidence            99999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.36  E-value=2.8e-12  Score=81.40  Aligned_cols=81  Identities=19%  Similarity=0.278  Sum_probs=54.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||............  ..       .....+.....    ....+.+++.+||..+|.
T Consensus       185 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~--~~-------~~~~~~~~~~~----~~~~~~~~i~~~l~~~p~  251 (265)
T cd06631         185 YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI--GA-------HRGLMPRLPDS----FSAAAIDFVTSCLTRDQH  251 (265)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh--hh-------ccCCCCCCCCC----CCHHHHHHHHHHhcCCcc
Confidence            567899999999999999999998643321111111  00       00011112222    223567999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||++.+++.|.|+
T Consensus       252 ~Rp~~~~~l~~~~~  265 (265)
T cd06631         252 ERPSALQLLRHDFL  265 (265)
T ss_pred             cCCCHHHHhcCCCC
Confidence            99999999988763

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.36  E-value=1.2e-12  Score=85.93  Aligned_cols=96  Identities=18%  Similarity=0.238  Sum_probs=59.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHh--------hh-------cCCcCcccccHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARR--------SM-------VDPAVNKACLDES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~-------~~~~~~~~~~~~~   65 (127)
                      .++.++|+|++|++++++++|+.||........ ..+.............        ..       ..+... ......
T Consensus       185 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  263 (337)
T cd07858         185 EYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHA  263 (337)
T ss_pred             CCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHH-HHcccC
Confidence            367899999999999999999999864432211 1122111111110110        00       000000 001123


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ...+.+++.+||..+|.+||++.+++.|.|+..
T Consensus       264 ~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         264 NPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             CHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence            345779999999999999999999999998754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.36  E-value=1.3e-12  Score=91.69  Aligned_cols=81  Identities=17%  Similarity=0.320  Sum_probs=57.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .|+.++||||||+++||+++ |..|+.... ...+...+.               ..-+.+-+..+..++.++|..||+.
T Consensus       497 ~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~---------------~G~r~~~P~~c~~eiY~iM~~CW~~  561 (609)
T KOG0200|consen  497 VFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLK---------------EGNRMEQPEHCSDEIYDLMKSCWNA  561 (609)
T ss_pred             cccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHh---------------cCCCCCCCCCCCHHHHHHHHHHhCC
Confidence            58899999999999999999 888886422 221222221               1111112334456788999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|.+||++.++...+...
T Consensus       562 ~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  562 DPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             CcccCCCHHHHHHHHHHH
Confidence            999999999998877763

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.36  E-value=1.2e-12  Score=85.90  Aligned_cols=97  Identities=22%  Similarity=0.281  Sum_probs=59.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCc-----------Cccc---ccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPA-----------VNKA---CLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~   67 (127)
                      ++.++|+||+|+++++|++|+.||..... .....+.........+.........           ....   .......
T Consensus       187 ~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
T cd07849         187 YTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADP  266 (336)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCc
Confidence            56789999999999999999999854332 2222222211111111111111000           0000   0011234


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+.+++.+||..+|.+||++.+++.|.++..-
T Consensus       267 ~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         267 KALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            57799999999999999999999999987543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.36  E-value=1.6e-12  Score=85.51  Aligned_cols=98  Identities=18%  Similarity=0.333  Sum_probs=59.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh--------cC--CcCcccc----cHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM--------VD--PAVNKAC----LDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~----~~~~~   66 (127)
                      .++.++||||+||++++|++|..||..... ..+..+...............        ..  +......    .....
T Consensus       192 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (343)
T cd07878         192 HYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGAN  271 (343)
T ss_pred             cCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCC
Confidence            367899999999999999999999864332 222222221111111010000        00  0000000    00112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..+|.+||++.+++.|.|+...
T Consensus       272 ~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         272 PLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            246799999999999999999999999998653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.36  E-value=3.4e-12  Score=82.06  Aligned_cols=91  Identities=19%  Similarity=0.187  Sum_probs=56.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++|+|++|+++++|++|..||.....  ...............   ... ......  .......+.+|+.+||..
T Consensus       179 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~--~~~~~~~~~~li~~~l~~  252 (287)
T cd06621         179 PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN---PEL-KDEPGN--GIKWSEEFKDFIKQCLEK  252 (287)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc---hhh-ccCCCC--CCchHHHHHHHHHHHcCC
Confidence            467789999999999999999999864321  000111111111000   000 000000  011234577999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|.+||++.+++.|.|+..
T Consensus       253 ~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         253 DPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             CcccCCCHHHHHhCccccc
Confidence            9999999999999999743

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.36  E-value=4.9e-13  Score=84.94  Aligned_cols=82  Identities=20%  Similarity=0.232  Sum_probs=52.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++||++|..|+............      .   ......+....  .......+.+++.+||..+|.
T Consensus       186 ~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~------~---~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~  254 (267)
T cd06646         186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM------S---KSNFQPPKLKD--KTKWSSTFHNFVKISLTKNPK  254 (267)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCccccchhhhheee------e---cCCCCCCCCcc--ccccCHHHHHHHHHHhhCChh
Confidence            567899999999999999999997533211110000      0   00001111110  111234677999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.++++|++
T Consensus       255 ~Rp~~~~il~~l~  267 (267)
T cd06646         255 KRPTAERLLTHLF  267 (267)
T ss_pred             hCcCHHHHhcCCC
Confidence            9999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.36  E-value=6.3e-13  Score=86.80  Aligned_cols=80  Identities=18%  Similarity=0.258  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++||++|+.||...........+   ...      .   ...+.    .....+.+++.+||..+|
T Consensus       172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i---~~~------~---~~~~~----~~~~~~~~li~~~L~~dP  235 (320)
T cd05590         172 LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI---LND------E---VVYPT----WLSQDAVDILKAFMTKNP  235 (320)
T ss_pred             CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH---hcC------C---CCCCC----CCCHHHHHHHHHHcccCH
Confidence            3677899999999999999999999755433222211   000      0   11111    122356799999999999


Q ss_pred             CCCCCH------HHHHHHHHHh
Q 039745           82 AERPSV------EDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~------~~~~~~~~~~   97 (127)
                      .+|+++      .+++.|.|+.
T Consensus       236 ~~R~~~~~~~~~~~~~~h~~f~  257 (320)
T cd05590         236 TMRLGSLTLGGEEAILRHPFFK  257 (320)
T ss_pred             HHCCCCCCCCCHHHHHcCCCcC
Confidence            999998      8899998874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.36  E-value=1.2e-12  Score=82.92  Aligned_cols=82  Identities=24%  Similarity=0.404  Sum_probs=55.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccc-cHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKAC-LDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~   80 (127)
                      ++.++|+|++|+++++|++|+.||........ ....   ..         ..+...... .......+.+++.+||..+
T Consensus       184 ~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~  251 (267)
T cd06610         184 YDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL---QN---------DPPSLETGADYKKYSKSFRKMISLCLQKD  251 (267)
T ss_pred             cCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh---cC---------CCCCcCCccccccccHHHHHHHHHHcCCC
Confidence            56789999999999999999999864432211 1111   00         111111100 0122345679999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |..||++.+++.|+++
T Consensus       252 p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         252 PSKRPTAEELLKHKFF  267 (267)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999998764

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.36  E-value=3.3e-12  Score=80.86  Aligned_cols=78  Identities=17%  Similarity=0.336  Sum_probs=53.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|+++++|++ |..||...........+   ...        ........    ....+.+++.+||..+
T Consensus       177 ~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~---~~~--------~~~~~~~~----~~~~~~~li~~cl~~~  241 (256)
T cd05113         177 KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV---SQG--------LRLYRPHL----ASEKVYAIMYSCWHEK  241 (256)
T ss_pred             cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH---hcC--------CCCCCCCC----CCHHHHHHHHHHcCCC
Confidence            46788999999999999998 88888644432221111   000        00111111    2346679999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||++.+++.++
T Consensus       242 p~~Rp~~~~ll~~~  255 (256)
T cd05113         242 AEERPTFQQLLSSI  255 (256)
T ss_pred             cccCCCHHHHHHhh
Confidence            99999999998765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.36  E-value=3.9e-12  Score=81.55  Aligned_cols=79  Identities=20%  Similarity=0.338  Sum_probs=53.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++||++ |..||...........+.           .........    .....+.+++.+||..+
T Consensus       202 ~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~li~~cl~~~  266 (283)
T cd05090         202 KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR-----------KRQLLPCSE----DCPPRMYSLMTECWQEG  266 (283)
T ss_pred             CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----------cCCcCCCCC----CCCHHHHHHHHHHcccC
Confidence            46789999999999999998 888885433222221110           000011111    12345678999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++.+++.
T Consensus       267 p~~Rp~~~~i~~~l~  281 (283)
T cd05090         267 PSRRPRFKDIHTRLR  281 (283)
T ss_pred             cccCcCHHHHHHHhh
Confidence            999999999988774

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.36  E-value=1.9e-12  Score=84.02  Aligned_cols=96  Identities=21%  Similarity=0.261  Sum_probs=58.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh----------cCCcCcccc---cHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM----------VDPAVNKAC---LDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~~~~~   68 (127)
                      ++.++|+||+|++++|+++|..||..... .....+............+..          .........   .......
T Consensus       186 ~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (309)
T cd07845         186 YTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEA  265 (309)
T ss_pred             cCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHH
Confidence            57789999999999999999999864433 222222211111100000000          000000000   0012345


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.+++.+||..||.+||++.+++.|.|+..
T Consensus       266 ~~~li~~ml~~dp~~R~t~~~il~h~~f~~  295 (309)
T cd07845         266 GLRLLNFLLMYDPKKRATAEEALESSYFKE  295 (309)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence            678999999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.35  E-value=5.2e-12  Score=81.26  Aligned_cols=81  Identities=21%  Similarity=0.363  Sum_probs=56.4

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++||++ |..||.............           ........    ......+.+++..||..+|
T Consensus       206 ~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~~i~~cl~~~P  270 (290)
T cd05045         206 YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK-----------TGYRMERP----ENCSEEMYNLMLTCWKQEP  270 (290)
T ss_pred             cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-----------CCCCCCCC----CCCCHHHHHHHHHHccCCc
Confidence            5678999999999999998 988886544333222221           00111111    1123467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.+++..+..+.
T Consensus       271 ~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         271 DKRPTFADISKELEKMM  287 (290)
T ss_pred             ccCCCHHHHHHHHHHHH
Confidence            99999999999887543

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.35  E-value=1.5e-12  Score=83.54  Aligned_cols=84  Identities=19%  Similarity=0.286  Sum_probs=56.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++|+.||........ .....           .......  .........+.+++.+||..+
T Consensus       173 ~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~-----------~~~~~~~--~~~~~~~~~~~~li~~~l~~~  239 (280)
T cd05608         173 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ-----------RILNDSV--TYPDKFSPASKSFCEALLAKD  239 (280)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH-----------hhcccCC--CCcccCCHHHHHHHHHHhcCC
Confidence            467899999999999999999999864332111 11110           0000100  011122345679999999999


Q ss_pred             CCCCC-----CHHHHHHHHHHhh
Q 039745           81 PAERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp-----~~~~~~~~~~~~~   98 (127)
                      |.+|+     ++.+++.|.|+..
T Consensus       240 P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         240 PEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             HHHhcCCCCCCHHHHhcChhhhc
Confidence            99999     7899999999855

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.35  E-value=1.5e-12  Score=83.45  Aligned_cols=93  Identities=22%  Similarity=0.382  Sum_probs=55.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhh----------hcCCcCccc-----ccHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRS----------MVDPAVNKA-----CLDESL   66 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-----~~~~~~   66 (127)
                      ++.++|+||+|++++|+++|+++|..... .....+......... ....          +..+.....     ......
T Consensus       178 ~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (286)
T cd07846         178 YGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIP-RHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLS  256 (286)
T ss_pred             cCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCch-hhHHHhccchHhhccccccccCcchHHHhCCCcC
Confidence            56789999999999999999988854332 222222211111000 0000          001111000     001123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ..+.+|+.+||..+|.+||++.+++.|.||
T Consensus       257 ~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         257 GLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             HHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            467799999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.35  E-value=9.3e-13  Score=85.91  Aligned_cols=81  Identities=20%  Similarity=0.414  Sum_probs=55.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+||+++||++|..||...........+.            ...+..+.    .....+.+++.+||..+|
T Consensus       172 ~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~------------~~~~~~~~----~~~~~~~~li~~~l~~~P  235 (316)
T cd05619         172 KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR------------MDNPCYPR----WLTREAKDILVKLFVREP  235 (316)
T ss_pred             CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH------------hCCCCCCc----cCCHHHHHHHHHHhccCH
Confidence            46789999999999999999999996544332222220            01111111    122356689999999999


Q ss_pred             CCCCCHH-HHHHHHHHhh
Q 039745           82 AERPSVE-DVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~-~~~~~~~~~~   98 (127)
                      .+|+++. +++.|.++..
T Consensus       236 ~~R~~~~~~l~~h~~~~~  253 (316)
T cd05619         236 ERRLGVKGDIRQHPFFRE  253 (316)
T ss_pred             hhcCCChHHHHcCcccCC
Confidence            9999996 7888877533

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.35  E-value=1.4e-12  Score=83.57  Aligned_cols=81  Identities=17%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|+.|+........  +..         ......+....  +......+.+++.+||..+|+
T Consensus       206 ~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~--~~~---------~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~  272 (286)
T cd06638         206 YDARCDVWSLGITAIELGDGDPPLADLHPMRA--LFK---------IPRNPPPTLHQ--PELWSNEFNDFIRKCLTKDYE  272 (286)
T ss_pred             ccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--Hhh---------ccccCCCcccC--CCCcCHHHHHHHHHHccCCcc
Confidence            67799999999999999999999864332111  110         00000011100  011123567999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||++.++++|+++
T Consensus       273 ~Rps~~ell~~~~~  286 (286)
T cd06638         273 KRPTVSDLLQHVFI  286 (286)
T ss_pred             cCCCHHHHhhcccC
Confidence            99999999998863

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.35  E-value=3.3e-12  Score=85.64  Aligned_cols=97  Identities=19%  Similarity=0.177  Sum_probs=58.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch--------hHHHHHHHHHHHHhhch-------HHHhhh---------cCCcC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK--------EVDLLKNQLQAVITADE-------SARRSM---------VDPAV   57 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~--------~~~~~~~~~~~~~~~~~-------~~~~~~---------~~~~~   57 (127)
                      .|+.++||||+||++||+++|..|+...        ...++..++...+..+.       ..+...         ..+..
T Consensus       259 ~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (391)
T PHA03212        259 PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGS  338 (391)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCC
Confidence            4788999999999999999998875321        11222222222111100       000000         00100


Q ss_pred             ccc--ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           58 NKA--CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        58 ~~~--~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ...  ........+.+|+.+||..+|.+||++.+++.|.|+..
T Consensus       339 ~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        339 RPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             CCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence            000  01123446789999999999999999999999999754

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.35  E-value=3.4e-12  Score=81.76  Aligned_cols=79  Identities=19%  Similarity=0.320  Sum_probs=52.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||||++++|+++ |..||............   ...        .......    .....+.+|+.+||..+
T Consensus       200 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~---~~~--------~~~~~~~----~~~~~~~~li~~cl~~~  264 (280)
T cd05092         200 KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI---TQG--------RELERPR----TCPPEVYAIMQGCWQRE  264 (280)
T ss_pred             CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH---HcC--------ccCCCCC----CCCHHHHHHHHHHccCC
Confidence            36778999999999999998 88888543322111111   000        0011111    12235679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++...+.
T Consensus       265 P~~Rp~~~~l~~~l~  279 (280)
T cd05092         265 PQQRMVIKDIHSRLQ  279 (280)
T ss_pred             hhhCCCHHHHHHHHh
Confidence            999999999987663

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.35  E-value=4.1e-12  Score=80.33  Aligned_cols=79  Identities=24%  Similarity=0.355  Sum_probs=54.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++||++ |+.||...........+.           ....+...    ......+.+++.+||..+
T Consensus       175 ~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~li~~~l~~~  239 (256)
T cd05082         175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----------KGYKMDAP----DGCPPVVYDVMKQCWHLD  239 (256)
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-----------cCCCCCCC----CCCCHHHHHHHHHHhcCC
Confidence            36678999999999999997 888886544332221110           00111111    122346679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       240 p~~Rpt~~~l~~~l~  254 (256)
T cd05082         240 AATRPSFLQLREQLE  254 (256)
T ss_pred             hhhCcCHHHHHHHHh
Confidence            999999999998775

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.35  E-value=3.8e-12  Score=81.95  Aligned_cols=82  Identities=20%  Similarity=0.233  Sum_probs=54.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|+++||+++|..|+........  ...         ......+...  ........+.+++.+||..+|+
T Consensus       192 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~---------~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~  258 (292)
T cd06644         192 YDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLK---------IAKSEPPTLS--QPSKWSMEFRDFLKTALDKHPE  258 (292)
T ss_pred             CCchhhhHhHHHHHHHHhcCCCCCccccHHHH--HHH---------HhcCCCccCC--CCcccCHHHHHHHHHHhcCCcc
Confidence            46689999999999999999999864332211  110         0000111110  0111223567899999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +||++.+++.|.++.
T Consensus       259 ~Rp~~~~il~~~~~~  273 (292)
T cd06644         259 TRPSAAQLLEHPFVS  273 (292)
T ss_pred             cCcCHHHHhcCcccc
Confidence            999999999998853

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.35  E-value=3.1e-12  Score=81.92  Aligned_cols=95  Identities=21%  Similarity=0.249  Sum_probs=57.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHh-------hhcCCc---CcccccHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARR-------SMVDPA---VNKACLDESLKTMM   70 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~   70 (127)
                      .++.++|+||+|++++||++|.+||..... .....+.............       ......   ............+.
T Consensus       182 ~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (287)
T cd07838         182 SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGL  261 (287)
T ss_pred             CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHH
Confidence            356789999999999999999988864432 2222222211111000000       000000   00111122345677


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +++.+||..+|.+||++.+++.|.|+
T Consensus       262 ~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         262 DLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             HHHHHHhccCCccCCCHHHHhcCcCC
Confidence            99999999999999999999988763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.35  E-value=5.2e-12  Score=79.53  Aligned_cols=79  Identities=16%  Similarity=0.355  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.           .......    +......+.+++.+||..+
T Consensus       171 ~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~-----------~~~~~~~----~~~~~~~~~~li~~~l~~~  235 (251)
T cd05041         171 RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-----------SGYRMPA----PQLCPEEIYRLMLQCWAYD  235 (251)
T ss_pred             CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh-----------cCCCCCC----CccCCHHHHHHHHHHhccC
Confidence            46788999999999999998 788875443322222211           0000111    1122346779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       236 p~~Rp~~~ell~~l~  250 (251)
T cd05041         236 PENRPSFSEIYNELQ  250 (251)
T ss_pred             hhhCcCHHHHHHHhh
Confidence            999999999998763

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.35  E-value=4.2e-12  Score=82.50  Aligned_cols=95  Identities=20%  Similarity=0.262  Sum_probs=57.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHH-----Hhh----hc-------CCcC----ccccc
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESA-----RRS----MV-------DPAV----NKACL   62 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~-------~~~~----~~~~~   62 (127)
                      |+.++|+||+|++++|+++|+.||........  ............     .+.    +.       .+..    .....
T Consensus       187 ~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (314)
T cd08216         187 YNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYT  264 (314)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchh
Confidence            67889999999999999999999864332111  110000000000     000    00       0000    00011


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           63 DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        63 ~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ......+.+|+..||..+|++||++.+++.|+++..-
T Consensus       265 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         265 RTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             hHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence            1223467789999999999999999999999997543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.35  E-value=1.1e-12  Score=89.80  Aligned_cols=76  Identities=17%  Similarity=0.308  Sum_probs=56.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      |+..+|+||+|+++|+|++|..||...... .+...+              ..+.+.    ........+|+..||+.+|
T Consensus       490 yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i--------------~~~~~s----~~vS~~AKdLl~~LL~~dP  551 (612)
T KOG0603|consen  490 YTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI--------------QMPKFS----ECVSDEAKDLLQQLLQVDP  551 (612)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh--------------cCCccc----cccCHHHHHHHHHhccCCh
Confidence            788999999999999999999998644332 121111              112221    2223356699999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+|+++.++..|.|+
T Consensus       552 ~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  552 ALRLGADEIGAHPWF  566 (612)
T ss_pred             hhCcChhhhccCcch
Confidence            999999999999998

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.35  E-value=1.2e-12  Score=83.74  Aligned_cols=93  Identities=22%  Similarity=0.308  Sum_probs=55.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHH------hh-------hcCCcCcccccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESAR------RS-------MVDPAVNKACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~~~~~~   68 (127)
                      ++.++|+||+|++++++++|+.||..... .....+............      +.       ...... ..........
T Consensus       177 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  255 (283)
T cd07835         177 YSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL-SKVVPNLDED  255 (283)
T ss_pred             cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccch-hhhcCCCCHH
Confidence            56789999999999999999999854332 222222221111110000      00       000000 0001111245


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +.+++.+||..+|.+||++.+++.|.||
T Consensus       256 ~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         256 GLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            7799999999999999999999988764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.35  E-value=5e-12  Score=89.80  Aligned_cols=83  Identities=17%  Similarity=0.263  Sum_probs=57.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||||||++|||++|+.||........ ..+.    .      .....+...    ......+.+++..||..+
T Consensus       556 ~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il----~------~~~~~p~~~----~~~~~~~~~~l~~lL~~d  621 (669)
T cd05610         556 PHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNIL----N------RDIPWPEGE----EKLSVNAQNAIEILLTMD  621 (669)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH----h------cCCCCCccc----ccCCHHHHHHHHHHcccC
Confidence            367899999999999999999999965443222 1111    0      000011111    122335668889999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.+++.|.|+..
T Consensus       622 P~~R~ta~e~l~h~~~~~  639 (669)
T cd05610         622 PTKRAGLKELKQHPLFHG  639 (669)
T ss_pred             hhHCcCHHHHHhCHhhcC
Confidence            999999999999999744

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.35  E-value=1.4e-12  Score=84.03  Aligned_cols=94  Identities=19%  Similarity=0.268  Sum_probs=56.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcC-------CcCc----ccccHHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVD-------PAVN----KACLDESLKTMM   70 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~~~   70 (127)
                      ++.++|+|++|+++++|++|..||.... ......+.................       +...    ..........+.
T Consensus       189 ~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (295)
T cd07837         189 YSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGL  268 (295)
T ss_pred             CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHH
Confidence            5778999999999999999999985432 222222222111111100000000       0000    000011234577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +|+.+||..+|.+||++.+++.|.|+
T Consensus       269 ~~i~~~l~~~P~~R~~~~eil~~~~~  294 (295)
T cd07837         269 DLLQKMLRYDPAKRISAKAALTHPYF  294 (295)
T ss_pred             HHHHHHccCChhhcCCHHHHhcCCCc
Confidence            99999999999999999999998874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.35  E-value=6.9e-13  Score=92.57  Aligned_cols=84  Identities=23%  Similarity=0.389  Sum_probs=60.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |++.+|||||||...||.+|++||-.-...+. .+++.....        ..|.    .+.....++.+|+.+|+..+|.
T Consensus       755 YG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmyK--------vHP~----iPeelsaeak~FilrcFepd~~  821 (1226)
T KOG4279|consen  755 YGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMYK--------VHPP----IPEELSAEAKNFILRCFEPDPC  821 (1226)
T ss_pred             CCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhccee--------cCCC----CcHHHHHHHHHHHHHHcCCCcc
Confidence            78999999999999999999999854332222 222111110        1133    3455566778999999999999


Q ss_pred             CCCCHHHHHHHHHHhhh
Q 039745           83 ERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~   99 (127)
                      +||++++++..++....
T Consensus       822 ~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  822 DRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             cCccHHHhccCcccccC
Confidence            99999999998875443

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.35  E-value=5.8e-12  Score=81.72  Aligned_cols=84  Identities=18%  Similarity=0.283  Sum_probs=58.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++||++ |..||...........+.           .......    +......+.+++.+||..+
T Consensus       218 ~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~----~~~~~~~~~~li~~~l~~~  282 (307)
T cd05098         218 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK-----------EGHRMDK----PSNCTNELYMMMRDCWHAV  282 (307)
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-----------cCCCCCC----CCcCCHHHHHHHHHHcccC
Confidence            36778999999999999998 888886544332222210           0000111    1122346678999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.+++.++..+...
T Consensus       283 p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         283 PSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             hhhCcCHHHHHHHHHHHHHH
Confidence            99999999999999876654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.35  E-value=1e-11  Score=82.11  Aligned_cols=100  Identities=19%  Similarity=0.275  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHh-------hhcC-------------------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARR-------SMVD-------------------   54 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~-------------------   54 (127)
                      .++.++|+||+|+++++|++|+.||...+. .....+.............       ....                   
T Consensus       193 ~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (353)
T cd07850         193 GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLF  272 (353)
T ss_pred             CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCccccc
Confidence            367889999999999999999999854332 2222222111111110000       0000                   


Q ss_pred             CcCcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           55 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        55 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +.............+.+++.+||+.+|.+||++.+++.|.|+.....
T Consensus       273 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~  319 (353)
T cd07850         273 PPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD  319 (353)
T ss_pred             CcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence            00000001122445779999999999999999999999999765443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.35  E-value=5.6e-13  Score=87.36  Aligned_cols=80  Identities=16%  Similarity=0.167  Sum_probs=55.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+||+++||++|..||...........+   ...         ....+..    ....+.+|+.+||..+|.
T Consensus       192 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i---~~~---------~~~~p~~----~~~~~~~li~~~L~~dP~  255 (329)
T PTZ00263        192 HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKI---LAG---------RLKFPNW----FDGRARDLVKGLLQTDHT  255 (329)
T ss_pred             CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHH---hcC---------CcCCCCC----CCHHHHHHHHHHhhcCHH
Confidence            678999999999999999999998654432222111   000         0111111    123566999999999999


Q ss_pred             CCCC-----HHHHHHHHHHhh
Q 039745           83 ERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~-----~~~~~~~~~~~~   98 (127)
                      +|++     +.+++.|+|+..
T Consensus       256 ~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        256 KRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HcCCCCCCCHHHHhcCCccCC
Confidence            9986     799999998754

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=5.6e-13  Score=86.73  Aligned_cols=81  Identities=14%  Similarity=0.279  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||...........+   ..         .......    .....+.+++.+||..+|
T Consensus       169 ~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~---~~---------~~~~~~~----~~~~~~~~li~~~L~~dp  232 (312)
T cd05585         169 GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI---LQ---------EPLRFPD----GFDRDAKDLLIGLLSRDP  232 (312)
T ss_pred             CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH---Hc---------CCCCCCC----cCCHHHHHHHHHHcCCCH
Confidence            3678899999999999999999999654433222111   00         0011111    122356799999999999


Q ss_pred             CCCC---CHHHHHHHHHHhh
Q 039745           82 AERP---SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp---~~~~~~~~~~~~~   98 (127)
                      .+|+   ++.+++.|+|+..
T Consensus       233 ~~R~~~~~~~e~l~hp~~~~  252 (312)
T cd05585         233 TRRLGYNGAQEIKNHPFFSQ  252 (312)
T ss_pred             HHcCCCCCHHHHHcCCCcCC
Confidence            9997   5789999988754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.35  E-value=6.6e-12  Score=80.35  Aligned_cols=83  Identities=12%  Similarity=0.252  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+.           ........    ......+.+++.+||..+
T Consensus       187 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~li~~~l~~d  251 (279)
T cd05109         187 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-----------KGERLPQP----PICTIDVYMIMVKCWMID  251 (279)
T ss_pred             CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----------CCCcCCCC----ccCCHHHHHHHHHHcCCC
Confidence            36778999999999999998 888886544332322221           00001111    122345678999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |..||++.+++..+.....
T Consensus       252 p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         252 SECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             hhhCcCHHHHHHHHHHhhc
Confidence            9999999999987765443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.35  E-value=5.6e-12  Score=81.10  Aligned_cols=83  Identities=18%  Similarity=0.310  Sum_probs=55.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++||++ |..||...........+   ..       ... ......    ....+.+|+.+||..+
T Consensus       198 ~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i---~~-------~~~-~~~~~~----~~~~l~~li~~~l~~~  262 (288)
T cd05093         198 KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI---TQ-------GRV-LQRPRT----CPKEVYDLMLGCWQRE  262 (288)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc-------CCc-CCCCCC----CCHHHHHHHHHHccCC
Confidence            36778999999999999998 88888644432221111   00       000 111111    2235779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++..+..+..
T Consensus       263 p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         263 PHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             hhhCCCHHHHHHHHHHHHH
Confidence            9999999999888776553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.34  E-value=1.7e-12  Score=85.13  Aligned_cols=97  Identities=21%  Similarity=0.235  Sum_probs=60.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhh--------hc---CCcCc---ccccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRS--------MV---DPAVN---KACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~---~~~~~---~~~~~~~~~   67 (127)
                      ++.++|+|++|++++||++|+.||...... ....+....+.........        ..   .....   .........
T Consensus       189 ~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (334)
T cd07855         189 YTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASP  268 (334)
T ss_pred             cccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCH
Confidence            678899999999999999999999644332 2222222111111111110        00   00000   000112245


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+.+++.+||+.+|.+||++.+++.|+|+..-
T Consensus       269 ~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~  300 (334)
T cd07855         269 EALDLLSQMLQFDPEERITVEQALQHPFLAQY  300 (334)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence            67899999999999999999999999997543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.34  E-value=6.2e-12  Score=81.17  Aligned_cols=87  Identities=21%  Similarity=0.318  Sum_probs=53.1

Q ss_pred             CCCCCchhHHHHHHHHHHHHh--CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      +.++.++|+||+|++++||++  |..|+...........   ..............+. .    ..+...+.+|+..||.
T Consensus       207 ~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~----~~~~~~~~~li~~cl~  278 (296)
T cd05095         207 GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN---TGEFFRDQGRQVYLPK-P----ALCPDSLYKLMLSCWR  278 (296)
T ss_pred             CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHH---HHHHHhhccccccCCC-C----CCCCHHHHHHHHHHcC
Confidence            356789999999999999998  6667754332211111   1000000000001111 1    1122467799999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039745           79 KNPAERPSVEDVLWNLQ   95 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~   95 (127)
                      .+|.+||++.++.+.+.
T Consensus       279 ~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         279 RNAKERPSFQEIHATLL  295 (296)
T ss_pred             CCcccCCCHHHHHHHHh
Confidence            99999999999988764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.34  E-value=1.3e-12  Score=83.64  Aligned_cols=83  Identities=16%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||+|++++|+++|++||........ ..+.   ..         ..+...  .+......+.+|+.+||..+|
T Consensus       185 ~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~---~~---------~~~~~~--~~~~~~~~~~~li~~~l~~~p  250 (282)
T cd06643         185 YDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIA---KS---------EPPTLA--QPSRWSSEFKDFLKKCLEKNV  250 (282)
T ss_pred             CCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHh---hc---------CCCCCC--CccccCHHHHHHHHHHccCCh
Confidence            55689999999999999999999864432211 1111   00         001100  011122456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.++...
T Consensus       251 ~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         251 DARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             hhCcCHHHHhcCCCEecc
Confidence            999999999999986543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.34  E-value=7.9e-13  Score=86.22  Aligned_cols=81  Identities=19%  Similarity=0.325  Sum_probs=55.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||...........+.            ...+..+..    ....+.+++.+||..+|
T Consensus       172 ~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~------------~~~~~~~~~----~~~~~~~li~~~l~~dP  235 (316)
T cd05620         172 KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR------------VDTPHYPRW----ITKESKDILEKLFERDP  235 (316)
T ss_pred             CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH------------hCCCCCCCC----CCHHHHHHHHHHccCCH
Confidence            46789999999999999999999996554332222210            011111111    22356689999999999


Q ss_pred             CCCCCH-HHHHHHHHHhh
Q 039745           82 AERPSV-EDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~-~~~~~~~~~~~   98 (127)
                      .+|+++ .+++.|.|+..
T Consensus       236 ~~R~~~~~~~~~h~~f~~  253 (316)
T cd05620         236 TRRLGVVGNIRGHPFFKT  253 (316)
T ss_pred             HHcCCChHHHHcCCCcCC
Confidence            999997 57777887643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.34  E-value=5.1e-12  Score=80.54  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=54.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||||++++||++ |..||...........+           ..-......    ......+.+++.+||..+
T Consensus       187 ~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~  251 (270)
T cd05047         187 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----------PQGYRLEKP----LNCDDEVYDLMRQCWREK  251 (270)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-----------hCCCCCCCC----CcCCHHHHHHHHHHcccC
Confidence            35678999999999999997 88898543322211111           000001111    112235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.+++..+..+
T Consensus       252 p~~Rps~~~il~~l~~~  268 (270)
T cd05047         252 PYERPSFAQILVSLNRM  268 (270)
T ss_pred             hhhCCCHHHHHHHHHHh
Confidence            99999999999988654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.34  E-value=6.1e-12  Score=79.72  Aligned_cols=79  Identities=23%  Similarity=0.369  Sum_probs=53.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+   .        .......    .......+.+|+.+||..+
T Consensus       179 ~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~---~--------~~~~~~~----~~~~~~~~~~li~~~l~~~  243 (260)
T cd05070         179 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV---E--------RGYRMPC----PQDCPISLHELMLQCWKKD  243 (260)
T ss_pred             CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---H--------cCCCCCC----CCcCCHHHHHHHHHHcccC
Confidence            45678999999999999999 88888543322111111   0        0001111    1222345779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++...+.
T Consensus       244 p~~Rpt~~~l~~~l~  258 (260)
T cd05070         244 PEERPTFEYLQSFLE  258 (260)
T ss_pred             cccCcCHHHHHHHHh
Confidence            999999999987664

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.34  E-value=3.3e-12  Score=82.95  Aligned_cols=83  Identities=19%  Similarity=0.292  Sum_probs=56.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++|..|+...... ....+.            ....+...   .......+.+|+.+||..+
T Consensus       190 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~li~~cl~~~  254 (308)
T cd06634         190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA------------QNESPALQ---SGHWSEYFRNFVDSCLQKI  254 (308)
T ss_pred             CCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHh------------hcCCCCcC---cccccHHHHHHHHHHhhCC
Confidence            3567899999999999999999997543321 111111            00001111   1122345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++.|.++...
T Consensus       255 P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         255 PQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             cccCCCHHHHhhCcccccc
Confidence            9999999999999987664

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.34  E-value=4.4e-12  Score=80.35  Aligned_cols=79  Identities=18%  Similarity=0.291  Sum_probs=53.4

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++++++ |..||...........+           ...........    ....+.+++.+||..+
T Consensus       180 ~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~li~~~l~~~  244 (261)
T cd05072         180 SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-----------QRGYRMPRMEN----CPDELYDIMKTCWKEK  244 (261)
T ss_pred             CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-----------HcCCCCCCCCC----CCHHHHHHHHHHccCC
Confidence            45678999999999999998 88888644322221111           00111111111    2235678999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |++||++.++...+.
T Consensus       245 p~~Rp~~~~i~~~l~  259 (261)
T cd05072         245 AEERPTFDYLQSVLD  259 (261)
T ss_pred             cccCcCHHHHHHHHh
Confidence            999999999988765

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.34  E-value=5.1e-12  Score=80.06  Aligned_cols=79  Identities=24%  Similarity=0.340  Sum_probs=53.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |+.||............           .........    ......+.+++.+||..+
T Consensus       179 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~  243 (260)
T cd05067         179 TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL-----------ERGYRMPRP----DNCPEELYELMRLCWKEK  243 (260)
T ss_pred             CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHH-----------HcCCCCCCC----CCCCHHHHHHHHHHccCC
Confidence            35678999999999999998 99998644322221111           000011111    112345779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |++||+++++...+.
T Consensus       244 p~~Rp~~~~l~~~l~  258 (260)
T cd05067         244 PEERPTFEYLRSVLE  258 (260)
T ss_pred             hhhCCCHHHHHHHhh
Confidence            999999999988764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.34  E-value=5.5e-12  Score=79.54  Aligned_cols=79  Identities=20%  Similarity=0.349  Sum_probs=52.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..|+...........+           .........    ......+.+|+.+||..+
T Consensus       172 ~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~  236 (252)
T cd05084         172 RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI-----------EQGVRLPCP----ELCPDAVYRLMERCWEYD  236 (252)
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH-----------HcCCCCCCc----ccCCHHHHHHHHHHcCCC
Confidence            45678999999999999997 88887543322211111           010111111    122346779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++++.+.
T Consensus       237 p~~Rps~~~~~~~l~  251 (252)
T cd05084         237 PGQRPSFSTVHQELQ  251 (252)
T ss_pred             hhhCcCHHHHHHHHh
Confidence            999999999987653

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.34  E-value=4.4e-12  Score=80.21  Aligned_cols=78  Identities=18%  Similarity=0.354  Sum_probs=53.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |+.||...........+           ..........    .....+.+++.+||..+
T Consensus       177 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~~li~~cl~~~  241 (256)
T cd05059         177 RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV-----------SAGYRLYRPK----LAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH-----------HcCCcCCCCC----CCCHHHHHHHHHHhcCC
Confidence            46778999999999999998 78888644332221111           0111111111    12346779999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |++||++.+++..+
T Consensus       242 p~~Rpt~~~~l~~l  255 (256)
T cd05059         242 PEDRPAFKKLLSQL  255 (256)
T ss_pred             hhhCcCHHHHHHHh
Confidence            99999999998865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.34  E-value=1.1e-12  Score=85.72  Aligned_cols=80  Identities=18%  Similarity=0.315  Sum_probs=55.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++||++|+.||...........+   ..         .....+...    ...+.+++.+||..+|
T Consensus       177 ~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i---~~---------~~~~~p~~~----~~~~~~li~~~L~~dP  240 (324)
T cd05589         177 SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI---VN---------DEVRYPRFL----SREAISIMRRLLRRNP  240 (324)
T ss_pred             CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh---------CCCCCCCCC----CHHHHHHHHHHhhcCH
Confidence            4677899999999999999999999655433221111   00         001111111    2345689999999999


Q ss_pred             CCCC-----CHHHHHHHHHHh
Q 039745           82 AERP-----SVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~   97 (127)
                      .+||     ++.+++.|.++.
T Consensus       241 ~~R~~~~~~~~~~l~~~~~f~  261 (324)
T cd05589         241 ERRLGSGEKDAEDVKKQPFFR  261 (324)
T ss_pred             hHcCCCCCCCHHHHhhCCCcC
Confidence            9999     688999988763

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.34  E-value=2.4e-12  Score=84.73  Aligned_cols=97  Identities=18%  Similarity=0.283  Sum_probs=58.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcC----------CcCccc----ccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVD----------PAVNKA----CLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~   67 (127)
                      ++.++|+||+|++++|+++|+.||..... .....+........+.......+          +.....    .......
T Consensus       192 ~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (342)
T cd07879         192 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASP  271 (342)
T ss_pred             cCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCH
Confidence            67789999999999999999999965432 22222221111111100000000          000000    0011223


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+.+|+.+||..+|.+||++.+++.|.++...
T Consensus       272 ~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         272 QAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence            56799999999999999999999999987554

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.34  E-value=1.1e-11  Score=81.44  Aligned_cols=97  Identities=19%  Similarity=0.312  Sum_probs=57.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHH------------HhhhcCCcCc--ccccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESA------------RRSMVDPAVN--KACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~--~~~~~~~~~   67 (127)
                      ++.++|+||+|++++++++|+.||.... ......+...........            +.........  .........
T Consensus       190 ~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (337)
T cd07852         190 YTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASD  269 (337)
T ss_pred             ccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCH
Confidence            5678999999999999999999985332 222222221111100000            0000000000  000011234


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+.+++.+||+.+|++||++.+++.|.++...
T Consensus       270 ~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         270 DALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence            67799999999999999999999999886553

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.34  E-value=7.4e-12  Score=79.30  Aligned_cols=81  Identities=19%  Similarity=0.335  Sum_probs=53.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhC-CCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++| .+|+............   ...        ..+....    ..+..+.+++..||..+
T Consensus       178 ~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~----~~~~~~~~li~~cl~~~  242 (262)
T cd05058         178 KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL---LQG--------RRLLQPE----YCPDPLYEVMLSCWHPK  242 (262)
T ss_pred             ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---hcC--------CCCCCCC----cCCHHHHHHHHHHcCCC
Confidence            356789999999999999995 5556543322221111   000        0011111    11235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |++||++.+++..+...
T Consensus       243 p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         243 PEMRPTFSELVSRIEQI  259 (262)
T ss_pred             hhhCCCHHHHHHHHHHH
Confidence            99999999999988754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.34  E-value=3.6e-12  Score=85.44  Aligned_cols=100  Identities=18%  Similarity=0.173  Sum_probs=59.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh----HHHHHHHHHHHHhhchH-----------HHhhhc---CCcCc-ccc-
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE----VDLLKNQLQAVITADES-----------ARRSMV---DPAVN-KAC-   61 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~~~-~~~-   61 (127)
                      .|+.++||||+||+++||++|+.||....    ...+..++.........           ......   .+... ... 
T Consensus       263 ~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (392)
T PHA03207        263 PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVI  342 (392)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchh
Confidence            46789999999999999999999984322    22222222211110000           000000   00000 000 


Q ss_pred             -cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           62 -LDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        62 -~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                       .......+.+++.+||..+|.+||++.+++.|++|.....
T Consensus       343 ~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        343 RKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             hccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence             0011235668999999999999999999999999865433

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.34  E-value=5.6e-12  Score=79.71  Aligned_cols=78  Identities=22%  Similarity=0.429  Sum_probs=52.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |+.||...........+.   ..     .....+.   .    ....+.+++.+||..+
T Consensus       177 ~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~---~~-----~~~~~~~---~----~~~~~~~li~~c~~~~  241 (256)
T cd05114         177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMIS---RG-----FRLYRPK---L----ASMTVYEVMYSCWHEK  241 (256)
T ss_pred             ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---CC-----CCCCCCC---C----CCHHHHHHHHHHccCC
Confidence            35678999999999999999 888886544322221110   00     0001111   1    1235679999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||++.++++.+
T Consensus       242 p~~Rps~~~l~~~l  255 (256)
T cd05114         242 PEGRPTFAELLRAI  255 (256)
T ss_pred             cccCcCHHHHHHhh
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.34  E-value=6e-12  Score=79.68  Aligned_cols=80  Identities=18%  Similarity=0.354  Sum_probs=54.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+|++|++++++++ |+.||...........+.   .        .......    ......+.+++.+||..+
T Consensus       180 ~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~---~--------~~~~~~~----~~~~~~~~~~i~~~l~~~  244 (261)
T cd05148         180 TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT---A--------GYRMPCP----AKCPQEIYKIMLECWAAE  244 (261)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH---h--------CCcCCCC----CCCCHHHHHHHHHHcCCC
Confidence            35678999999999999998 788885443222211110   0        0011111    122235669999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.++...+..
T Consensus       245 p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         245 PEDRPSFKALREELDN  260 (261)
T ss_pred             chhCcCHHHHHHHHhc
Confidence            9999999999988763

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.34  E-value=1.5e-12  Score=83.77  Aligned_cols=85  Identities=16%  Similarity=0.289  Sum_probs=56.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|+++++|++|+.||.................    ...    ......    ....+.+|+..||..+|
T Consensus       177 ~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~----~~~----~~~~~~----~~~~~~~li~~~l~~~p  244 (285)
T cd05630         177 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK----EVQ----EEYSEK----FSPDARSLCKMLLCKDP  244 (285)
T ss_pred             CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh----hhh----hhcCcc----CCHHHHHHHHHHhhcCH
Confidence            467889999999999999999999964321111111100000    000    111111    22346699999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|++     +.+++.|.|+..
T Consensus       245 ~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         245 KERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHccCCCCCchHHHHcChhhhc
Confidence            99999     899999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.34  E-value=4.3e-12  Score=81.91  Aligned_cols=85  Identities=14%  Similarity=0.251  Sum_probs=56.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|+++++|++|+.||....... .........         ..+.....  ......+.+|+.+||..+|.
T Consensus       195 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~---------~~~~~~~~--~~~~~~l~~li~~~l~~~p~  262 (296)
T cd06618         195 YDIRADVWSLGISLVELATGQFPYKNCKTEF-EVLTKILQE---------EPPSLPPN--EGFSPDFCSFVDLCLTKDHR  262 (296)
T ss_pred             cccchhHHHHHHHHHHHHhCCCCCCcchhHH-HHHHHHhcC---------CCCCCCCC--CCCCHHHHHHHHHHccCChh
Confidence            5678999999999999999999986432211 111100000         00111100  01234567999999999999


Q ss_pred             CCCCHHHHHHHHHHhhh
Q 039745           83 ERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~   99 (127)
                      +||++.+++.|.|+...
T Consensus       263 ~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         263 KRPKYRELLQHPFIRRY  279 (296)
T ss_pred             hCCCHHHHhcChhhhcc
Confidence            99999999999987653

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.34  E-value=9.7e-12  Score=78.97  Aligned_cols=82  Identities=17%  Similarity=0.233  Sum_probs=54.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|+++++|++|..||........ ....        .......+...   .......+.+++.+||..+|.
T Consensus       183 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~--------~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~  250 (267)
T cd08229         183 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCK--------KIEQCDYPPLP---SDHYSEELRQLVNMCINPDPE  250 (267)
T ss_pred             ccchhhHHHHHHHHHHHHhCCCCcccccchHH-HHhh--------hhhcCCCCCCC---cccccHHHHHHHHHhcCCCcc
Confidence            56689999999999999999999854332211 1110        11111111111   122344677999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||++.++++.+..
T Consensus       251 ~Rpt~~~i~~~~~~  264 (267)
T cd08229         251 KRPDITYVYDVAKR  264 (267)
T ss_pred             cCCCHHHHHHHHhh
Confidence            99999998877653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.33  E-value=6.2e-12  Score=80.44  Aligned_cols=85  Identities=21%  Similarity=0.328  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++++++|..|+...........+   .        ....+...    ......+.+++.+||..+|
T Consensus       177 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~--------~~~~~~~~----~~~~~~~~~~i~~~l~~~p  241 (277)
T cd06641         177 AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI---P--------KNNPPTLE----GNYSKPLKEFVEACLNKEP  241 (277)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH---h--------cCCCCCCC----cccCHHHHHHHHHHccCCh
Confidence            3567899999999999999999998644322111111   0        00011111    1223456789999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.+++.|.++.....
T Consensus       242 ~~Rp~~~~~l~~~~~~~~~~  261 (277)
T cd06641         242 SFRPTAKELLKHKFIVRFAK  261 (277)
T ss_pred             hhCcCHHHHHhCHHHhhhhh
Confidence            99999999999998766544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.33  E-value=9.5e-12  Score=80.47  Aligned_cols=85  Identities=18%  Similarity=0.321  Sum_probs=56.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++|+++|+.||...........+           .....+...  ........+.+++..||..+|
T Consensus       193 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~P  259 (297)
T cd06659         193 PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-----------RDSPPPKLK--NAHKISPVLRDFLERMLTREP  259 (297)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------hccCCCCcc--ccCCCCHHHHHHHHHHhcCCc
Confidence            3577899999999999999999998643322111111           000000000  011122346689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.+++.|.++...
T Consensus       260 ~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         260 QERATAQELLDHPFLLQT  277 (297)
T ss_pred             ccCcCHHHHhhChhhccC
Confidence            999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.33  E-value=5.6e-12  Score=80.61  Aligned_cols=79  Identities=16%  Similarity=0.267  Sum_probs=53.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||............   ...        ..+....    .....+.+++.+||+.+
T Consensus       197 ~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~---~~~--------~~~~~~~----~~~~~~~~li~~~l~~~  261 (277)
T cd05062         197 VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV---MEG--------GLLDKPD----NCPDMLFELMRMCWQYN  261 (277)
T ss_pred             CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HcC--------CcCCCCC----CCCHHHHHHHHHHcCCC
Confidence            46788999999999999998 68888644433222111   000        0011111    12335679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++.++.
T Consensus       262 p~~Rps~~e~l~~l~  276 (277)
T cd05062         262 PKMRPSFLEIISSIK  276 (277)
T ss_pred             hhhCcCHHHHHHHhh
Confidence            999999999998764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=1.2e-12  Score=85.86  Aligned_cols=88  Identities=15%  Similarity=0.179  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhc-CCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMV-DPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+||+++||++|..||...........+.        ...... .+..... .......+.+|+.+||..+
T Consensus       174 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--------~~~~~~~~~~~~~~-~~~~s~~~~~li~~~l~~~  244 (333)
T cd05600         174 GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK--------YWKETLQRPVYDDP-RFNLSDEAWDLITKLINDP  244 (333)
T ss_pred             CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH--------hccccccCCCCCcc-ccccCHHHHHHHHHHhhCh
Confidence            46789999999999999999999996554332221111        000000 1111000 0112345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+|+++.+++.|.|+..
T Consensus       245 ~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         245 SRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             hhhcCCHHHHHhCcccCC
Confidence            999999999999998754

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.33  E-value=2.1e-12  Score=82.23  Aligned_cols=83  Identities=20%  Similarity=0.337  Sum_probs=54.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++|+++|..|+.......  ......        .....+.............+.+++..||..+|.
T Consensus       189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  258 (272)
T cd06629         189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA--AMFKLG--------NKRSAPPIPPDVSMNLSPVALDFLNACFTINPD  258 (272)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCcCcchHH--HHHHhh--------ccccCCcCCccccccCCHHHHHHHHHHhcCChh
Confidence            5778999999999999999999985433211  111000        000011111111112234677999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      .||++.+++.|+|
T Consensus       259 ~Rps~~~il~~~~  271 (272)
T cd06629         259 NRPTARELLQHPF  271 (272)
T ss_pred             hCCCHHHHhhCCC
Confidence            9999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.33  E-value=6.1e-12  Score=79.73  Aligned_cols=80  Identities=14%  Similarity=0.238  Sum_probs=54.4

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+   ...        ..+...    ......+.+++.+||..+
T Consensus       174 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~--------~~~~~~----~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         174 KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI---EQG--------KRLDCP----AECPPEMYALMKDCWIYK  238 (257)
T ss_pred             CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH---HCC--------CCCCCC----CCCCHHHHHHHHHHcCCC
Confidence            35678999999999999996 99998644332222111   000        001111    222346678999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.++.+.+..
T Consensus       239 ~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         239 WEDRPNFAKVEERMRT  254 (257)
T ss_pred             hhhCcCHHHHHHHHhh
Confidence            9999999999887753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.33  E-value=8.8e-13  Score=86.24  Aligned_cols=81  Identities=15%  Similarity=0.246  Sum_probs=56.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+||+++|+++|+.||...........+.   .         .....+...    ...+.+++.+||..+|
T Consensus       171 ~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~---~---------~~~~~p~~~----~~~~~~li~~~L~~dP  234 (323)
T cd05595         171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL---M---------EEIRFPRTL----SPEAKSLLAGLLKKDP  234 (323)
T ss_pred             CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh---c---------CCCCCCCCC----CHHHHHHHHHHccCCH
Confidence            46789999999999999999999986544332222110   0         011111122    2356699999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+|+     ++.++++|.|+..
T Consensus       235 ~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         235 KQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             HHhCCCCCCCHHHHHcCCCcCC
Confidence            9998     8999999988754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.33  E-value=6.9e-12  Score=79.71  Aligned_cols=81  Identities=16%  Similarity=0.331  Sum_probs=55.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+|++|++++++++ |..||...........+.   .       ....+ ..    ......+.+++.+||..+
T Consensus       184 ~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~---~-------~~~~~-~~----~~~~~~l~~li~~cl~~~  248 (266)
T cd05033         184 KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVE---D-------GYRLP-PP----MDCPSALYQLMLDCWQKD  248 (266)
T ss_pred             CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH---c-------CCCCC-CC----CCCCHHHHHHHHHHcCCC
Confidence            35678999999999999998 988885443322221110   0       00001 11    112345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.++++++..+
T Consensus       249 p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         249 RNERPTFSQIVSTLDKM  265 (266)
T ss_pred             cccCcCHHHHHHHHHhh
Confidence            99999999999988643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.33  E-value=2.7e-12  Score=83.09  Aligned_cols=94  Identities=18%  Similarity=0.199  Sum_probs=56.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHH------hhhcCCcCccccc-------HHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESAR------RSMVDPAVNKACL-------DESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-------~~~~~~   68 (127)
                      ++.++|+||+|++++||++|++||..... .....+............      +...+........       ......
T Consensus       204 ~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (311)
T cd07866         204 YTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPE  283 (311)
T ss_pred             cCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChh
Confidence            57789999999999999999999854332 222222221111111000      0000000000000       111246


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +.+++.+||..+|.+||++.+++.|.||
T Consensus       284 ~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         284 GLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            7799999999999999999999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.33  E-value=5.5e-12  Score=79.64  Aligned_cols=78  Identities=21%  Similarity=0.450  Sum_probs=53.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+   ....     ....+..       ....+.+|+.+||..+
T Consensus       177 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~~-----~~~~~~~-------~~~~~~~l~~~~l~~~  241 (256)
T cd05112         177 KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI---NAGF-----RLYKPRL-------ASQSVYELMQHCWKER  241 (256)
T ss_pred             CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH---hCCC-----CCCCCCC-------CCHHHHHHHHHHcccC
Confidence            45678999999999999998 88888654433221111   0000     0011111       1245779999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||++.++++.+
T Consensus       242 p~~Rp~~~~~l~~l  255 (256)
T cd05112         242 PEDRPSFSLLLHQL  255 (256)
T ss_pred             hhhCCCHHHHHHhh
Confidence            99999999998875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.33  E-value=3.7e-12  Score=81.01  Aligned_cols=79  Identities=16%  Similarity=0.312  Sum_probs=51.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|+.||........  +....        .....+...    ......+..++ .||..+|.
T Consensus       186 ~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~--~~~~~--------~~~~~~~~~----~~~~~~~~~li-~~~~~~p~  250 (266)
T cd06651         186 YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA--IFKIA--------TQPTNPQLP----SHISEHARDFL-GCIFVEAR  250 (266)
T ss_pred             CCchhhhHHHHHHHHHHHHCCCCccccchHHH--HHHHh--------cCCCCCCCc----hhcCHHHHHHH-HHhcCChh
Confidence            56789999999999999999999864432211  11000        000112111    22223445666 68888999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||++.+++.|+++
T Consensus       251 ~Rp~~~eil~hp~~  264 (266)
T cd06651         251 HRPSAEELLRHPFA  264 (266)
T ss_pred             hCcCHHHHhcCccc
Confidence            99999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.33  E-value=1.1e-11  Score=78.55  Aligned_cols=79  Identities=23%  Similarity=0.330  Sum_probs=53.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||............   ..        ......    .......+.+++.+||..+
T Consensus       179 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~---~~--------~~~~~~----~~~~~~~~~~li~~~l~~~  243 (260)
T cd05069         179 RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV---ER--------GYRMPC----PQGCPESLHELMKLCWKKD  243 (260)
T ss_pred             CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc--------CCCCCC----CcccCHHHHHHHHHHccCC
Confidence            35678999999999999999 88888644322221111   00        000111    1223346779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++.+.+.
T Consensus       244 p~~Rp~~~~i~~~l~  258 (260)
T cd05069         244 PDERPTFEYIQSFLE  258 (260)
T ss_pred             cccCcCHHHHHHHHh
Confidence            999999999988765

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=1.8e-12  Score=83.30  Aligned_cols=84  Identities=15%  Similarity=0.235  Sum_probs=56.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++|..||........ ..+..        .+.. .....    .......+.+|+.+||..+
T Consensus       177 ~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~--------~~~~-~~~~~----~~~~~~~~~~li~~~l~~~  243 (285)
T cd05605         177 RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER--------RVKE-DQEEY----SEKFSEAARSICRQLLTKD  243 (285)
T ss_pred             CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH--------Hhhh-ccccc----CcccCHHHHHHHHHHccCC
Confidence            367789999999999999999999964432211 11111        0000 00111    1122335679999999999


Q ss_pred             CCCCC-----CHHHHHHHHHHhh
Q 039745           81 PAERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp-----~~~~~~~~~~~~~   98 (127)
                      |.+|+     ++.+++.|.|+..
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         244 PGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCcCccC
Confidence            99999     8889999988754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.33  E-value=2.4e-12  Score=81.21  Aligned_cols=78  Identities=15%  Similarity=0.252  Sum_probs=53.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++++++|..||.............  .        . ......    ......+.+++..||..+|.
T Consensus       178 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~--~--------~-~~~~~~----~~~~~~l~~li~~~l~~~p~  242 (256)
T cd08220         178 YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIM--S--------G-TFAPIS----DRYSPDLRQLILSMLNLDPS  242 (256)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHH--h--------c-CCCCCC----CCcCHHHHHHHHHHccCChh
Confidence            5678999999999999999999986544332211110  0        0 001111    11233567999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.+++.|++
T Consensus       243 ~Rpt~~~ll~~p~  255 (256)
T cd08220         243 KRPQLSQIMAQPI  255 (256)
T ss_pred             hCCCHHHHhhCCC
Confidence            9999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.33  E-value=3.3e-12  Score=82.08  Aligned_cols=85  Identities=19%  Similarity=0.377  Sum_probs=57.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++|+++|+.||...........+           .....+....  .......+.+|+.+||..+|
T Consensus       191 ~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p  257 (285)
T cd06648         191 PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI-----------RDNLPPKLKN--LHKVSPRLRSFLDRMLVRDP  257 (285)
T ss_pred             CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH-----------HhcCCCCCcc--cccCCHHHHHHHHHHcccCh
Confidence            3678899999999999999999998543322111111           0111111111  11123467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.+++.|.++...
T Consensus       258 ~~Rpt~~~il~~~~~~~~  275 (285)
T cd06648         258 AQRATAAELLNHPFLAKA  275 (285)
T ss_pred             hhCcCHHHHccCcccccC
Confidence            999999999999886543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.33  E-value=1.9e-12  Score=82.92  Aligned_cols=90  Identities=18%  Similarity=0.283  Sum_probs=55.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHH-HHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLK-NQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++++++|+.||......... ....        .....................+.+++.+||..+
T Consensus       169 ~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  240 (279)
T cd06619         169 QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQ--------LLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQ  240 (279)
T ss_pred             CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHH--------HHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCC
Confidence            3677899999999999999999998532211100 0000        000111110000001112235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |..||++.+++.|.|+...
T Consensus       241 P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         241 PKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             hhhCCCHHHHhcCcccccc
Confidence            9999999999999886443

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.33  E-value=4.5e-12  Score=84.50  Aligned_cols=81  Identities=16%  Similarity=0.251  Sum_probs=54.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++ |+.||....... ......           ....+....    .....+.+++.+||..
T Consensus       290 ~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~l~~li~~cl~~  354 (374)
T cd05106         290 VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVK-----------RGYQMSRPD----FAPPEIYSIMKMCWNL  354 (374)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHH-----------cccCccCCC----CCCHHHHHHHHHHcCC
Confidence            47789999999999999997 999986433221 111110           000111111    1124567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|.+||++.++++.+..+
T Consensus       355 dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         355 EPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             ChhhCcCHHHHHHHHHHH
Confidence            999999999999987653

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.33  E-value=8e-12  Score=79.48  Aligned_cols=80  Identities=19%  Similarity=0.325  Sum_probs=53.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|+++||+++|+.||...........+.          .....+....    .....+.+++.+||..+|
T Consensus       189 ~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~l~~li~~cl~~~p  254 (269)
T cd08528         189 PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV----------EAVYEPLPEG----MYSEDVTDVITSCLTPDA  254 (269)
T ss_pred             CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh----------hccCCcCCcc----cCCHHHHHHHHHHCCCCC
Confidence            46789999999999999999999986444322211110          0001111111    122356799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.++..++.
T Consensus       255 ~~Rp~~~e~~~~~~  268 (269)
T cd08528         255 EARPDIIQVSAMIS  268 (269)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999987753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.32  E-value=7.7e-12  Score=78.74  Aligned_cols=78  Identities=17%  Similarity=0.305  Sum_probs=53.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++++++ |..||...........+           .........    ......+.+++.+||..+
T Consensus       170 ~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~  234 (250)
T cd05085         170 RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV-----------EKGYRMSCP----QKCPDDVYKVMQRCWDYK  234 (250)
T ss_pred             CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-----------HcCCCCCCC----CCCCHHHHHHHHHHcccC
Confidence            45678999999999999998 88888644332221111           000111111    112346779999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||++.++++.+
T Consensus       235 p~~Rp~~~~l~~~l  248 (250)
T cd05085         235 PENRPKFSELQKEL  248 (250)
T ss_pred             cccCCCHHHHHHHh
Confidence            99999999998765

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.32  E-value=7.7e-13  Score=86.70  Aligned_cols=81  Identities=16%  Similarity=0.324  Sum_probs=56.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++|+++|+.||...........+   .         ......+...    ...+.+|+.+||..+|
T Consensus       171 ~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~---~---------~~~~~~p~~~----~~~~~~li~~~L~~dP  234 (328)
T cd05593         171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---L---------MEDIKFPRTL----SADAKSLLSGLLIKDP  234 (328)
T ss_pred             CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh---c---------cCCccCCCCC----CHHHHHHHHHHcCCCH
Confidence            4678999999999999999999999654433222111   0         0011111122    2356699999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+|+     ++.++++|.|+..
T Consensus       235 ~~R~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         235 NKRLGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCC
Confidence            9997     8999999988643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.32  E-value=3.4e-12  Score=81.77  Aligned_cols=94  Identities=18%  Similarity=0.348  Sum_probs=56.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhh---------cCCcCcc----cccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSM---------VDPAVNK----ACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~~~~~~~~   68 (127)
                      ++.++|||++|++++|+++|.++|.... ...................+..         ..+....    .........
T Consensus       178 ~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (286)
T cd07832         178 YDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPE  257 (286)
T ss_pred             CCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHH
Confidence            5678999999999999999977775332 2222222221111111011110         0000000    000112357


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +.+++.+||..+|.+||++.+++.|.|+
T Consensus       258 ~~~li~~~l~~~p~~R~~~~~~l~h~~~  285 (286)
T cd07832         258 ALDLLKGLLVYDPSKRLSAAEALRHPYF  285 (286)
T ss_pred             HHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence            7899999999999999999999999876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.32  E-value=6.2e-12  Score=79.43  Aligned_cols=85  Identities=26%  Similarity=0.360  Sum_probs=55.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|+++++|++|..|+.... ......+.........    .....      .......+.+++..||..+
T Consensus       175 ~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~l~~li~~~l~~~  244 (260)
T PF00069_consen  175 KYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLP----SSSQQ------SREKSEELRDLIKKMLSKD  244 (260)
T ss_dssp             SBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHH----HHTTS------HTTSHHHHHHHHHHHSSSS
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhccccccc----ccccc------cchhHHHHHHHHHHHccCC
Confidence            46789999999999999999999986542 1222222111111000    00000      0001157789999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.++++|+|+
T Consensus       245 p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  245 PEQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGGSTTHHHHHTSGGG
T ss_pred             hhHCcCHHHHhcCCCC
Confidence            9999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.32  E-value=2.5e-12  Score=82.29  Aligned_cols=84  Identities=21%  Similarity=0.376  Sum_probs=57.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      ++.++|+|++|+++++|++|+.||.....  .......            ....+....   ......+.+++.+||..+
T Consensus       184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------------~~~~~~~~~---~~~~~~l~~li~~~l~~~  248 (283)
T cd06617         184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV------------EEPSPQLPA---EKFSPEFQDFVNKCLKKN  248 (283)
T ss_pred             cCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH------------hcCCCCCCc---cccCHHHHHHHHHHccCC
Confidence            56789999999999999999999853221  1111111            001111111   112345779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.+++.|.++.....
T Consensus       249 p~~Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         249 YKERPNYPELLQHPFFELHLS  269 (283)
T ss_pred             hhhCcCHHHHhcCchhhhccc
Confidence            999999999999999877543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.32  E-value=6e-12  Score=81.60  Aligned_cols=84  Identities=19%  Similarity=0.293  Sum_probs=56.8

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++|+++ |..||............           .........    ......+.+|+.+||..+|
T Consensus       200 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~p  264 (303)
T cd05088         200 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----------PQGYRLEKP----LNCDDEVYDLMRQCWREKP  264 (303)
T ss_pred             CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH-----------hcCCcCCCC----CCCCHHHHHHHHHHcCCCh
Confidence            5678999999999999998 99888544332211111           010011111    1122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.+++.++..+....
T Consensus       265 ~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         265 YERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             hhCcCHHHHHHHHHHHHHhh
Confidence            99999999999887665544

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=4.3e-12  Score=81.06  Aligned_cols=81  Identities=23%  Similarity=0.336  Sum_probs=55.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|+++++|++|..||............           .....+.....   .....+.+++.+||..+|.
T Consensus       179 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~  244 (277)
T cd06917         179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-----------PKSKPPRLEDN---GYSKLLREFVAACLDEEPK  244 (277)
T ss_pred             cccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-----------ccCCCCCCCcc---cCCHHHHHHHHHHcCCCcc
Confidence            467899999999999999999999654322111110           00011111111   1234677999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +||++.+++.+.|+.
T Consensus       245 ~R~~~~~il~~~~~~  259 (277)
T cd06917         245 ERLSAEELLKSKWIK  259 (277)
T ss_pred             cCcCHHHHhhChHhh
Confidence            999999999998873

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.32  E-value=1.5e-12  Score=84.86  Aligned_cols=80  Identities=20%  Similarity=0.397  Sum_probs=54.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|+.||...........+   ..         ..+..+..    ....+.+++.+||..+|
T Consensus       172 ~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i---~~---------~~~~~~~~----~~~~~~~ll~~~l~~~P  235 (316)
T cd05592         172 KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSI---LN---------DRPHFPRW----ISKEAKDCLSKLFERDP  235 (316)
T ss_pred             CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hc---------CCCCCCCC----CCHHHHHHHHHHccCCH
Confidence            4678999999999999999999999655433222111   00         01111111    22355689999999999


Q ss_pred             CCCCCHH-HHHHHHHHh
Q 039745           82 AERPSVE-DVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~-~~~~~~~~~   97 (127)
                      .+|+++. +++.|.++.
T Consensus       236 ~~R~~~~~~l~~h~~~~  252 (316)
T cd05592         236 TKRLGVDGDIRQHPFFR  252 (316)
T ss_pred             HHcCCChHHHHcCcccC
Confidence            9999865 677777653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.32  E-value=9.8e-12  Score=80.54  Aligned_cols=84  Identities=17%  Similarity=0.269  Sum_probs=57.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++ |..|+...........+   ...        .....    .......+.+|+.+||..+
T Consensus       215 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~--------~~~~~----~~~~~~~~~~li~~cl~~~  279 (304)
T cd05101         215 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL---KEG--------HRMDK----PANCTNELYMMMRDCWHAI  279 (304)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH---HcC--------CcCCC----CCCCCHHHHHHHHHHcccC
Confidence            36788999999999999998 77777544433222211   000        00111    1123346778999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++.+..+...
T Consensus       280 p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         280 PSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             hhhCCCHHHHHHHHHHHHHh
Confidence            99999999999998876654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.32  E-value=1.6e-11  Score=77.98  Aligned_cols=80  Identities=24%  Similarity=0.383  Sum_probs=54.4

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.           ......    ........+.+++.+||..+
T Consensus       179 ~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~l~~li~~~l~~~  243 (262)
T cd05071         179 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-----------RGYRMP----CPPECPESLHDLMCQCWRKE  243 (262)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh-----------cCCCCC----CccccCHHHHHHHHHHccCC
Confidence            46779999999999999999 777885443222211110           000011    11223446779999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.+++..+..
T Consensus       244 p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         244 PEERPTFEYLQAFLED  259 (262)
T ss_pred             cccCCCHHHHHHHHHH
Confidence            9999999999887754

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.32  E-value=4e-12  Score=82.26  Aligned_cols=94  Identities=15%  Similarity=0.159  Sum_probs=55.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHH-HhhchHHHhhh---------cCCcCcc-cc-----cHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV-ITADESARRSM---------VDPAVNK-AC-----LDESL   66 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~-~~-----~~~~~   66 (127)
                      ++.++|+||+|++++|+++|..||...........+... +.......+..         ..+.... ..     .....
T Consensus       201 ~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (310)
T cd07865         201 YGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKD  280 (310)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCC
Confidence            567899999999999999999998654432222222111 11111000000         0000000 00     00012


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ..+.+|+.+||..+|.+||++.+++.|.||
T Consensus       281 ~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         281 PHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            345689999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.32  E-value=8.6e-12  Score=80.79  Aligned_cols=86  Identities=19%  Similarity=0.255  Sum_probs=51.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh--CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++  +..|+..................   . .........    ..+...+.+|+.+||..
T Consensus       216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~----~~~~~~~~~li~~cl~~  287 (304)
T cd05096         216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRD---Q-GRQVYLFRP----PPCPQGLYELMLQCWSR  287 (304)
T ss_pred             CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhh---c-cccccccCC----CCCCHHHHHHHHHHccC
Confidence            57789999999999999987  45566543322211111000000   0 000001111    11234567999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQ   95 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~   95 (127)
                      +|.+||++.++...+.
T Consensus       288 ~p~~RPs~~~i~~~l~  303 (304)
T cd05096         288 DCRERPSFSDIHAFLT  303 (304)
T ss_pred             CchhCcCHHHHHHHHh
Confidence            9999999999977653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.32  E-value=8.1e-12  Score=79.56  Aligned_cols=79  Identities=22%  Similarity=0.339  Sum_probs=54.3

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++|+++ |+.|+...........+.           ........    ......+.+++.+||..+|
T Consensus       192 ~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~l~~~~l~~~p  256 (273)
T cd05074         192 YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI-----------KGNRLKQP----PDCLEDVYELMCQCWSPEP  256 (273)
T ss_pred             cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHH-----------cCCcCCCC----CCCCHHHHHHHHHHcCCCh
Confidence            5678999999999999998 888886544332222210           00001111    1123467799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.+++..+..
T Consensus       257 ~~Rps~~~~~~~l~~  271 (273)
T cd05074         257 KCRPSFQHLRDQLEL  271 (273)
T ss_pred             hhCcCHHHHHHHHHh
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.32  E-value=1.4e-12  Score=85.30  Aligned_cols=80  Identities=24%  Similarity=0.415  Sum_probs=55.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+||+++||++|+.||...........+   ..         .....+..    ....+.+++.+||..+|
T Consensus       177 ~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i---~~---------~~~~~~~~----~~~~~~~li~~~l~~~P  240 (324)
T cd05587         177 PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSI---ME---------HNVSYPKS----LSKEAVSICKGLLTKHP  240 (324)
T ss_pred             CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---Hc---------CCCCCCCC----CCHHHHHHHHHHhhcCH
Confidence            3678899999999999999999999655433222111   00         00111111    22356689999999999


Q ss_pred             CCCCCH-----HHHHHHHHHh
Q 039745           82 AERPSV-----EDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~-----~~~~~~~~~~   97 (127)
                      .+|++.     .+++.|+++.
T Consensus       241 ~~R~~~~~~~~~~~~~hp~~~  261 (324)
T cd05587         241 AKRLGCGPTGERDIREHAFFR  261 (324)
T ss_pred             HHcCCCCCCCHHHHhcCCCcC
Confidence            999976     7888888764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.32  E-value=9.7e-13  Score=85.92  Aligned_cols=80  Identities=16%  Similarity=0.254  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||...........+   ..      ..   ...+.    .....+.+++.+||..+|
T Consensus       172 ~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i---~~------~~---~~~p~----~~~~~~~~ll~~~L~~dp  235 (321)
T cd05591         172 EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESI---LH------DD---VLYPV----WLSKEAVSILKAFMTKNP  235 (321)
T ss_pred             CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHH---Hc------CC---CCCCC----CCCHHHHHHHHHHhccCH
Confidence            4678999999999999999999999755433222111   00      00   11111    122356799999999999


Q ss_pred             CCCC-------CHHHHHHHHHHh
Q 039745           82 AERP-------SVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp-------~~~~~~~~~~~~   97 (127)
                      .+|+       ++.+++.|+++.
T Consensus       236 ~~R~~~~~~~~~~~~~~~hp~~~  258 (321)
T cd05591         236 NKRLGCVASQGGEDAIKQHPFFK  258 (321)
T ss_pred             HHcCCCCCCCCCHHHHhcCCccC
Confidence            9999       899999998863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.32  E-value=1.1e-11  Score=79.67  Aligned_cols=79  Identities=20%  Similarity=0.309  Sum_probs=52.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++||++ |..||...........+   ...      . . ....    ......+.+|+.+||..+
T Consensus       208 ~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~---~~~------~-~-~~~~----~~~~~~l~~li~~~l~~~  272 (288)
T cd05050         208 RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV---RDG------N-V-LSCP----DNCPLELYNLMRLCWSKL  272 (288)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---hcC------C-C-CCCC----CCCCHHHHHHHHHHcccC
Confidence            46778999999999999997 77787543332221111   000      0 0 0011    112346779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++++.+.
T Consensus       273 p~~Rpt~~el~~~l~  287 (288)
T cd05050         273 PSDRPSFASINRILQ  287 (288)
T ss_pred             cccCCCHHHHHHHhh
Confidence            999999999987664

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.32  E-value=9.6e-12  Score=78.84  Aligned_cols=79  Identities=23%  Similarity=0.466  Sum_probs=54.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |+.||...........+.           .......    .......+.+++.+||..+
T Consensus       180 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~----~~~~~~~~~~li~~~l~~~  244 (261)
T cd05068         180 RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVD-----------QGYRMPC----PPGCPKELYDIMLDCWKED  244 (261)
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----------cCCCCCC----CCcCCHHHHHHHHHHhhcC
Confidence            35678999999999999999 988886544332221110           0000111    1122345679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++...+.
T Consensus       245 P~~Rp~~~~l~~~l~  259 (261)
T cd05068         245 PDDRPTFETLQWKLE  259 (261)
T ss_pred             cccCCCHHHHHHHHh
Confidence            999999999988775

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.32  E-value=9.5e-12  Score=78.62  Aligned_cols=79  Identities=23%  Similarity=0.384  Sum_probs=54.4

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||.......+.....   ..        ......    ......+.+++.+||..+
T Consensus       175 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~----~~~~~~~~~li~~~l~~~  239 (256)
T cd05039         175 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE---KG--------YRMEAP----EGCPPEVYKVMKDCWELD  239 (256)
T ss_pred             cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh---cC--------CCCCCc----cCCCHHHHHHHHHHhccC
Confidence            45678999999999999997 888886554333222210   00        001111    112346679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       240 p~~Rp~~~~l~~~l~  254 (256)
T cd05039         240 PAKRPTFKQLREQLA  254 (256)
T ss_pred             hhhCcCHHHHHHHHh
Confidence            999999999998875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.32  E-value=4.4e-12  Score=84.29  Aligned_cols=80  Identities=19%  Similarity=0.306  Sum_probs=59.0

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|+++|.|++|+.||.......+...+.   .      ....-|..   ..   ...+..|+.+|+..+|..
T Consensus       201 g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~---~------~~~~~p~~---~~---S~~~~~Li~~mL~~~P~~  265 (370)
T KOG0583|consen  201 GKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIR---K------GEFKIPSY---LL---SPEARSLIEKMLVPDPST  265 (370)
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHh---c------CCccCCCC---cC---CHHHHHHHHHHcCCCccc
Confidence            479999999999999999999998755444433321   0      11111111   10   446679999999999999


Q ss_pred             CCCHHHHHHHHHHhh
Q 039745           84 RPSVEDVLWNLQFAA   98 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~   98 (127)
                      |+++.+++.|.|+..
T Consensus       266 R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  266 RITLLEILEHPWFQK  280 (370)
T ss_pred             CCCHHHHhhChhhcc
Confidence            999999999999987

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.32  E-value=6e-12  Score=83.92  Aligned_cols=80  Identities=15%  Similarity=0.286  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||||++++||++ |..||..... ......+   ...        ......    ......+.+|+..||..
T Consensus       292 ~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~---~~~--------~~~~~~----~~~~~~l~~li~~cl~~  356 (375)
T cd05104         292 VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMI---KEG--------YRMLSP----ECAPSEMYDIMKSCWDA  356 (375)
T ss_pred             CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHH---HhC--------ccCCCC----CCCCHHHHHHHHHHccC
Confidence            47789999999999999998 8888854322 1111111   100        001111    11123577999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQF   96 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~   96 (127)
                      +|.+||++.++++.+..
T Consensus       357 dP~~RPs~~eil~~l~~  373 (375)
T cd05104         357 DPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             ChhHCcCHHHHHHHHHh
Confidence            99999999999998764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.32  E-value=8.3e-12  Score=80.52  Aligned_cols=97  Identities=21%  Similarity=0.334  Sum_probs=58.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhh---h---cC-----CcCcccccHHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRS---M---VD-----PAVNKACLDESLKTMM   70 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~---~---~~-----~~~~~~~~~~~~~~~~   70 (127)
                      ++.++|+|++|++++|+++|.++|.... ...+..+..............   +   ..     +.............+.
T Consensus       180 ~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (298)
T cd07841         180 YGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDAL  259 (298)
T ss_pred             CCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHH
Confidence            5678999999999999999977775332 222222221111111101000   0   00     0000001112245678


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +++.+||..+|.+||++.+++.|.|+...
T Consensus       260 ~li~~~l~~~P~~R~s~~e~l~~~~~~~~  288 (298)
T cd07841         260 DLLQRLLTLNPNKRITARQALEHPYFSND  288 (298)
T ss_pred             HHHHHHhcCCcccCcCHHHHhhCccccCC
Confidence            99999999999999999999999986553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.32  E-value=3.7e-12  Score=81.93  Aligned_cols=94  Identities=20%  Similarity=0.296  Sum_probs=55.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh--HHHHHHHHHHHHhhchHHHhhhcC-------------CcCcccccHHH--
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVITADESARRSMVD-------------PAVNKACLDES--   65 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~--   65 (127)
                      ++.++|+||+|+++++|++|+.||....  ......+............+....             +..........  
T Consensus       181 ~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (291)
T cd07844         181 YSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDR  260 (291)
T ss_pred             cCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCC
Confidence            5678999999999999999999985433  222222222111111111111100             00000000001  


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ...+.+++.+||..+|.+||++.+++.|.||
T Consensus       261 ~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         261 IPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             chhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            1456799999999999999999999988764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.32  E-value=3e-11  Score=79.32  Aligned_cols=85  Identities=19%  Similarity=0.315  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..||...........+.   ..        ......    ......+.+++.+||..+
T Consensus       212 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~----~~~~~~l~~li~~cl~~~  276 (334)
T cd05100         212 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK---EG--------HRMDKP----ANCTHELYMIMRECWHAV  276 (334)
T ss_pred             CcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---cC--------CCCCCC----CCCCHHHHHHHHHHcccC
Confidence            36678999999999999998 888886544333222210   00        001111    122335679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.+++.++..+....
T Consensus       277 p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         277 PSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             hhhCcCHHHHHHHHHHHhhhc
Confidence            999999999999998776544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.31  E-value=1.4e-12  Score=85.26  Aligned_cols=80  Identities=21%  Similarity=0.360  Sum_probs=55.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+||+++||++|+.||.......+...+.   .         .....+.    .....+.+++.+||..+|
T Consensus       177 ~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~---~---------~~~~~p~----~~s~~~~~li~~~l~~~p  240 (323)
T cd05616         177 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM---E---------HNVAYPK----SMSKEAVAICKGLMTKHP  240 (323)
T ss_pred             CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH---h---------CCCCCCC----cCCHHHHHHHHHHcccCH
Confidence            47789999999999999999999997554433322220   0         0011111    123356799999999999


Q ss_pred             CCCCCH-----HHHHHHHHHh
Q 039745           82 AERPSV-----EDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~-----~~~~~~~~~~   97 (127)
                      .+|+++     .++++|.++.
T Consensus       241 ~~R~~~~~~~~~~i~~h~~~~  261 (323)
T cd05616         241 GKRLGCGPEGERDIKEHAFFR  261 (323)
T ss_pred             HhcCCCCCCCHHHHhcCCCcC
Confidence            999974     7888887653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.31  E-value=4.4e-12  Score=81.32  Aligned_cols=95  Identities=19%  Similarity=0.337  Sum_probs=56.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhh-cCCc-----Ccc---------cccHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSM-VDPA-----VNK---------ACLDES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~---------~~~~~~   65 (127)
                      .++.++|+||+|++++++++|..||.... ...+.................. .++.     ...         ......
T Consensus       178 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (288)
T cd07833         178 NYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKV  257 (288)
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCcc
Confidence            35678999999999999999999885432 2222222111111111000000 0000     000         001112


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ...+.+|+.+||..+|.+||++++++.|.||
T Consensus       258 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         258 SSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             chHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            4567899999999999999999999988764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.31  E-value=6.7e-12  Score=81.08  Aligned_cols=84  Identities=8%  Similarity=0.047  Sum_probs=53.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++|..||... ...........  .    .+..+......   .......+.+++..||..+
T Consensus       209 ~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  279 (294)
T PHA02882        209 CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC--D----FIKRLHEGKIK---IKNANKFIYDFIECVTKLS  279 (294)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH--H----HHHHhhhhhhc---cCCCCHHHHHHHHHHHhCC
Confidence            4678999999999999999999999643 22211111100  0    00011111110   0112346779999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      +.+||++.++.+.+
T Consensus       280 ~~~rp~~~~l~~~~  293 (294)
T PHA02882        280 YEEKPDYDALIKIF  293 (294)
T ss_pred             CCCCCCHHHHHHhh
Confidence            99999999998753

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.31  E-value=6.7e-12  Score=86.12  Aligned_cols=80  Identities=23%  Similarity=0.296  Sum_probs=54.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|+.||...........+   .       .....+ ..    ......+.+|+.+||..+|
T Consensus       247 ~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~---~-------~~~~~~-~~----~~~s~~~~~li~~~L~~dP  311 (478)
T PTZ00267        247 RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV---L-------YGKYDP-FP----CPVSSGMKALLDPLLSKNP  311 (478)
T ss_pred             CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---H-------hCCCCC-CC----ccCCHHHHHHHHHHhccCh
Confidence            4778999999999999999999998654432211111   0       000111 11    1122356799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      ..||++.+++.+.+.
T Consensus       312 ~~Rps~~~~l~~~~~  326 (478)
T PTZ00267        312 ALRPTTQQLLHTEFL  326 (478)
T ss_pred             hhCcCHHHHHhCHHH
Confidence            999999999877554

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.31  E-value=7.5e-12  Score=80.63  Aligned_cols=86  Identities=20%  Similarity=0.300  Sum_probs=52.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh--CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++|+++  +..|+............   .............+     ........+.+++.+||..
T Consensus       208 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~  279 (296)
T cd05051         208 KFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENA---GHFFRDDGRQIYLP-----RPPNCPKDIYELMLECWRR  279 (296)
T ss_pred             CCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHH---HhccccccccccCC-----CccCCCHHHHHHHHHHhcc
Confidence            56789999999999999998  66677543322111111   11000000000000     0111224678999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQ   95 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~   95 (127)
                      +|.+||++.++++.+.
T Consensus       280 ~p~~Rpt~~el~~~L~  295 (296)
T cd05051         280 DEEDRPTFREIHLFLQ  295 (296)
T ss_pred             ChhcCCCHHHHHHHhc
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.31  E-value=9.6e-12  Score=79.86  Aligned_cols=83  Identities=22%  Similarity=0.394  Sum_probs=56.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..|+.............  .        ... +....  .......+.+++.+||..+|.
T Consensus       193 ~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~--~--------~~~-~~~~~--~~~~~~~l~~li~~~l~~~p~  259 (286)
T cd06614         193 YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT--T--------KGI-PPLKN--PEKWSPEFKDFLNKCLVKDPE  259 (286)
T ss_pred             CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--h--------cCC-CCCcc--hhhCCHHHHHHHHHHhccChh
Confidence            5778999999999999999999986443322111110  0        000 11100  111234577999999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      .||++.+++.|.++..
T Consensus       260 ~Rpt~~~il~~~~~~~  275 (286)
T cd06614         260 KRPSAEELLQHPFLKK  275 (286)
T ss_pred             hCcCHHHHhhChHhhc
Confidence            9999999999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.31  E-value=1.9e-12  Score=88.50  Aligned_cols=87  Identities=20%  Similarity=0.272  Sum_probs=62.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|++.+|||+||+|.|||++|..||.....+++-.++   +.       ....+.. ......+.+.+.+|+..||.+++
T Consensus       569 PfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV---Gr-------G~l~pd~-s~~~s~~pk~mk~Ll~~C~~~~~  637 (678)
T KOG0193|consen  569 PFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV---GR-------GYLMPDL-SKIRSNCPKAMKRLLSDCWKFDR  637 (678)
T ss_pred             CCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe---cc-------cccCccc-hhhhccCHHHHHHHHHHHHhcCc
Confidence            4889999999999999999999999744444322222   11       1111111 11234566788899999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      ++||.+.+++..+..+..
T Consensus       638 ~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  638 EERPLFPQLLSKLEELLP  655 (678)
T ss_pred             ccCccHHHHHHHHHHhhh
Confidence            999999999997776555

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.31  E-value=2.7e-12  Score=80.92  Aligned_cols=84  Identities=18%  Similarity=0.297  Sum_probs=60.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSR--KEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +|+-++||||+|+.++|+++|..||..  .+.+.+..+.            .-.+|.+++..  .....+.+|+..||++
T Consensus       270 kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl------------n~ePP~L~~~~--gFSp~F~~fv~~CL~k  335 (391)
T KOG0983|consen  270 KYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL------------NEEPPLLPGHM--GFSPDFQSFVKDCLTK  335 (391)
T ss_pred             ccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH------------hcCCCCCCccc--CcCHHHHHHHHHHhhc
Confidence            588899999999999999999999965  3333333222            11123333221  1344677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |+.+||...++++|.+...-
T Consensus       336 d~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  336 DHRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             CcccCcchHHHhcCcceeec
Confidence            99999999999999875443

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=6.7e-12  Score=79.47  Aligned_cols=83  Identities=16%  Similarity=0.219  Sum_probs=55.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||.............   ...     .......    .......+.+++.+||..+|+
T Consensus       170 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~-----~~~~~~~----~~~~~~~~~~~i~~~l~~~p~  237 (260)
T cd05611         170 DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL---SRR-----INWPEEV----KEFCSPEAVDLINRLLCMDPA  237 (260)
T ss_pred             CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hcc-----cCCCCcc----cccCCHHHHHHHHHHccCCHH
Confidence            5678999999999999999999996544332211110   000     0000111    112234667999999999999


Q ss_pred             CCCC---HHHHHHHHHHh
Q 039745           83 ERPS---VEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~---~~~~~~~~~~~   97 (127)
                      +||+   +.+++.|+|+.
T Consensus       238 ~R~~~~~~~~~l~~~~~~  255 (260)
T cd05611         238 KRLGANGYQEIKSHPFFK  255 (260)
T ss_pred             HccCCCcHHHHHcChHhh
Confidence            9994   57899998864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.31  E-value=2e-11  Score=78.85  Aligned_cols=88  Identities=16%  Similarity=0.303  Sum_probs=58.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++|+++|+.||...........+           .....+.....  ......+.+++.+||..+|
T Consensus       194 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P  260 (292)
T cd06658         194 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-----------RDNLPPRVKDS--HKVSSVLRGFLDLMLVREP  260 (292)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------HhcCCCccccc--cccCHHHHHHHHHHccCCh
Confidence            3678899999999999999999998643322111111           11111111111  1122356688999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhccc
Q 039745           82 AERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      .+||++.++++|.++......
T Consensus       261 ~~Rpt~~~il~~~~~~~~~~~  281 (292)
T cd06658         261 SQRATAQELLQHPFLKLAGPP  281 (292)
T ss_pred             hHCcCHHHHhhChhhhccCCc
Confidence            999999999999887655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.31  E-value=4.1e-12  Score=80.73  Aligned_cols=83  Identities=17%  Similarity=0.203  Sum_probs=52.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|+++++|++|..|+............         .......+.....  ......+.+++.+||..+|
T Consensus       185 ~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P  253 (267)
T cd06645         185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM---------TKSNFQPPKLKDK--MKWSNSFHHFVKMALTKNP  253 (267)
T ss_pred             CCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh---------hccCCCCCccccc--CCCCHHHHHHHHHHccCCc
Confidence            3667899999999999999999997533221111111         0000001111100  0112356789999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.+++.|.|
T Consensus       254 ~~R~~~~~ll~~~~  267 (267)
T cd06645         254 KKRPTAEKLLQHPF  267 (267)
T ss_pred             hhCcCHHHHhcCCC
Confidence            99999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.31  E-value=3.8e-12  Score=82.20  Aligned_cols=93  Identities=14%  Similarity=0.153  Sum_probs=56.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCc-------------ccccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVN-------------KACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~   68 (127)
                      ++.++|||++|++++|+++|+.||..... ..+..+............+.+......             ..........
T Consensus       195 ~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (302)
T cd07864         195 YGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTP  274 (302)
T ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHH
Confidence            46789999999999999999999864332 222222221111111111111000000             0000112346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQ   95 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~   95 (127)
                      +.+++..||..+|.+||++.+++.|.|
T Consensus       275 ~~~li~~~l~~~P~~Rp~~~~il~~~~  301 (302)
T cd07864         275 ALDLLDHMLTLDPSKRCTAEEALNSPW  301 (302)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            789999999999999999999998865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.30  E-value=9.8e-12  Score=81.34  Aligned_cols=100  Identities=16%  Similarity=0.260  Sum_probs=60.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhh-----------cCCcCc---ccccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSM-----------VDPAVN---KACLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~~~~~~   66 (127)
                      .++.++|+||+|+++++|++|+.||...... ....+...............           ......   ........
T Consensus       183 ~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (330)
T cd07834         183 RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGAS  262 (330)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCC
Confidence            3567899999999999999999998654432 22222221111111111000           000000   00001123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+.+++.+||..+|.+||++.+++.|.|+.....
T Consensus       263 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         263 PEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence            46779999999999999999999999998765433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.30  E-value=5.1e-12  Score=82.89  Aligned_cols=97  Identities=22%  Similarity=0.341  Sum_probs=59.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcC--------CcCcc---cccHHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVD--------PAVNK---ACLDESLKTMM   70 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~   70 (127)
                      ++.++|+||+|++++|+++|..||.... ...+..+............+....        .....   .........+.
T Consensus       211 ~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (335)
T PTZ00024        211 YHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAI  290 (335)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHH
Confidence            5778999999999999999999986443 222222322221111100110000        00000   00011234577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +++.+||..+|++||++.+++.|.|+...
T Consensus       291 ~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        291 DLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             HHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence            99999999999999999999999998543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.30  E-value=5e-13  Score=86.88  Aligned_cols=97  Identities=20%  Similarity=0.222  Sum_probs=66.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhchHHHhhh----------cC----------------C
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSM----------VD----------------P   55 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~----------------~   55 (127)
                      .+..+||||+||+++|+.+|...|+ ..+.+++..+...++..+...+...          ++                +
T Consensus       286 wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~c  365 (415)
T KOG0671|consen  286 WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPC  365 (415)
T ss_pred             cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCC
Confidence            3578999999999999999999986 3455666555554443333111111          00                0


Q ss_pred             cCcc---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           56 AVNK---ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        56 ~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+..   .........+.+|+.++|.+||.+|+|+.+++.|++|...
T Consensus       366 kpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  366 KPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             ccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence            0100   1123444578899999999999999999999999998654

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.30  E-value=6.2e-12  Score=81.16  Aligned_cols=87  Identities=17%  Similarity=0.256  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+|++|++++++++|+.||............   ...        ..+...  ........+.+++..||..+|
T Consensus       191 ~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~---~~~--------~~~~~~--~~~~~~~~l~~li~~~l~~~p  257 (293)
T cd06647         191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATN--------GTPELQ--NPEKLSAIFRDFLNRCLEMDV  257 (293)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh---hcC--------CCCCCC--CccccCHHHHHHHHHHccCCh
Confidence            3567899999999999999999999644322110000   000        001110  111223356789999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ++||++.+++.|.++....+
T Consensus       258 ~~Rp~~~~il~h~~~~~~~~  277 (293)
T cd06647         258 EKRGSAKELLQHPFLKIAKP  277 (293)
T ss_pred             hhCcCHHHHhcCHHHhcCcc
Confidence            99999999999999865543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.30  E-value=1.6e-12  Score=89.67  Aligned_cols=83  Identities=17%  Similarity=0.298  Sum_probs=61.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +++..+|||.||+.+||++. |.+||++-. .+.+..+.                ...+..+++.|+..+..||.+||.+
T Consensus       568 rFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE----------------nGeRlP~P~nCPp~LYslmskcWay  631 (974)
T KOG4257|consen  568 RFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE----------------NGERLPCPPNCPPALYSLMSKCWAY  631 (974)
T ss_pred             cccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec----------------CCCCCCCCCCCChHHHHHHHHHhcc
Confidence            47889999999999999987 999986433 22221111                1111223455667888999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhc
Q 039745           80 NPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      +|.+||.+.++...+....+.
T Consensus       632 eP~kRPrftei~~~lsdv~qe  652 (974)
T KOG4257|consen  632 EPSKRPRFTEIKAILSDVLQE  652 (974)
T ss_pred             CcccCCcHHHHHHHHHHHHHH
Confidence            999999999999888776663

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.30  E-value=1.4e-12  Score=85.26  Aligned_cols=79  Identities=13%  Similarity=0.251  Sum_probs=55.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++||++|+.||...........+   ..       .  ....+..    ....+.+|+.+||..+|.
T Consensus       177 ~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~---~~-------~--~~~~~~~----~~~~~~~li~~~l~~~p~  240 (323)
T cd05584         177 HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKI---LK-------G--KLNLPPY----LTPEARDLLKKLLKRNPS  240 (323)
T ss_pred             CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHH---Hc-------C--CCCCCCC----CCHHHHHHHHHHcccCHh
Confidence            567899999999999999999999654432211111   00       0  0111111    123567999999999999


Q ss_pred             CCC-----CHHHHHHHHHHh
Q 039745           83 ERP-----SVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp-----~~~~~~~~~~~~   97 (127)
                      +|+     ++.+++.|.|+.
T Consensus       241 ~R~~~~~~~~~~l~~h~~~~  260 (323)
T cd05584         241 SRLGAGPGDAAEVQSHPFFR  260 (323)
T ss_pred             HcCCCCCCCHHHHhcCCCcC
Confidence            999     899999998864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.30  E-value=9.8e-12  Score=78.72  Aligned_cols=78  Identities=21%  Similarity=0.269  Sum_probs=53.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..|+............           .....+...    ......+.+++.+||..+|+
T Consensus       182 ~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~p~  246 (260)
T cd08222         182 YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRI-----------VEGPTPSLP----ETYSRQLNSIMQSMLNKDPS  246 (260)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH-----------HcCCCCCCc----chhcHHHHHHHHHHhcCChh
Confidence            466899999999999999999998543321111110           001111111    22334677999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.++++|.|
T Consensus       247 ~Rp~~~~il~~~~  259 (260)
T cd08222         247 LRPSAAEILRNPF  259 (260)
T ss_pred             hCcCHHHHhhCCC
Confidence            9999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.30  E-value=1.1e-11  Score=80.30  Aligned_cols=80  Identities=16%  Similarity=0.282  Sum_probs=53.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++|+++ |..||....... .....   ..        .......    ......+.+++.+||..
T Consensus       219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~~----~~~~~~~~~li~~cl~~  283 (302)
T cd05055         219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI---KE--------GYRMAQP----EHAPAEIYDIMKTCWDA  283 (302)
T ss_pred             CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH---Hc--------CCcCCCC----CCCCHHHHHHHHHHcCC
Confidence            35678999999999999998 888885433221 11111   00        0001111    11223677999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQF   96 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~   96 (127)
                      +|++||++.+++..+..
T Consensus       284 ~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         284 DPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             CchhCcCHHHHHHHHHh
Confidence            99999999999987754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.30  E-value=8.3e-12  Score=79.67  Aligned_cols=79  Identities=16%  Similarity=0.296  Sum_probs=54.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||.............   ..        .....+..    ....+.+++.+||..+
T Consensus       197 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~~~----~~~~~~~li~~~l~~~  261 (277)
T cd05032         197 VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI---DG--------GHLDLPEN----CPDKLLELMRMCWQYN  261 (277)
T ss_pred             CCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh---cC--------CCCCCCCC----CCHHHHHHHHHHcCCC
Confidence            46788999999999999998 888885444333222221   00        00111111    2346679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       262 p~~Rpt~~~l~~~l~  276 (277)
T cd05032         262 PKMRPTFLEIVSSLK  276 (277)
T ss_pred             hhhCCCHHHHHHHhc
Confidence            999999999987653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.30  E-value=1.3e-12  Score=80.92  Aligned_cols=83  Identities=16%  Similarity=0.297  Sum_probs=54.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+||++|+|+.|..||...-..  ..-+          ...+..+...-.........+.+++..|++.||.
T Consensus       218 i~ertDIWSLGCtLYa~mf~~sPfe~~~~~--GgSl----------aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~  285 (302)
T KOG2345|consen  218 ITERTDIWSLGCTLYAMMFGESPFERIYQQ--GGSL----------ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPN  285 (302)
T ss_pred             cccccchhhhhHHHHHHHHcCCcchHHhhc--CCeE----------EEeeeccccccCCCCCccHHHHHHHHHHhcCCcc
Confidence            578999999999999999999998632210  0000          0011111110000111345677999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +||+..+++.++..+
T Consensus       286 qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  286 QRPTIPELLSKLDDL  300 (302)
T ss_pred             cCCCHHHHHHHHHhh
Confidence            999999999887643

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.30  E-value=1.5e-11  Score=89.46  Aligned_cols=80  Identities=21%  Similarity=0.270  Sum_probs=55.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|||||||++|||++|..||.... ...+...+   ...          +....   ......+.+|+..||..+|
T Consensus       220 ~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~l---k~~----------p~lpi---~~~S~eL~dLI~~~L~~dP  283 (1021)
T PTZ00266        220 YDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISEL---KRG----------PDLPI---KGKSKELNILIKNLLNLSA  283 (1021)
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHH---hcC----------CCCCc---CCCCHHHHHHHHHHhcCCh
Confidence            6789999999999999999999996432 22111111   000          11110   0112356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.+++.+.++..
T Consensus       284 eeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        284 KERPSALQCLGYQIIKN  300 (1021)
T ss_pred             hHCcCHHHHhccHHHhh
Confidence            99999999999887643

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.30  E-value=6.6e-12  Score=79.81  Aligned_cols=75  Identities=20%  Similarity=0.319  Sum_probs=50.4

Q ss_pred             CCCchhHHHHHHHHHHHH-hCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|+++|||+ .|..|+.............           ... . ..    ......+.+|+.+||..+|
T Consensus       186 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-----------~~~-~-~~----~~~~~~~~~li~~cl~~dp  248 (262)
T cd05077         186 LSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYE-----------GQC-M-LV----TPSCKELADLMTHCMNYDP  248 (262)
T ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHh-----------cCc-c-CC----CCChHHHHHHHHHHcCCCh
Confidence            677899999999999997 4777775433222111110           000 0 00    0112356799999999999


Q ss_pred             CCCCCHHHHHHHH
Q 039745           82 AERPSVEDVLWNL   94 (127)
Q Consensus        82 ~~Rp~~~~~~~~~   94 (127)
                      .+||++.++++++
T Consensus       249 ~~Rp~~~~il~~~  261 (262)
T cd05077         249 NQRPFFRAIMRDI  261 (262)
T ss_pred             hhCcCHHHHHHhc
Confidence            9999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.30  E-value=8.5e-12  Score=79.72  Aligned_cols=95  Identities=25%  Similarity=0.345  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcC--------CcCcc----cccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVD--------PAVNK----ACLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~~   68 (127)
                      .++.++|+|++|++++|+++|..||..... ..+..+................+        +....    .........
T Consensus       175 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (282)
T cd07829         175 HYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPE  254 (282)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHH
Confidence            467789999999999999999988854332 22222222111111111110000        00000    000111346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +.+++..||..+|.+||++.+++.|+|+
T Consensus       255 ~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         255 GIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            7899999999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.30  E-value=1.5e-11  Score=77.75  Aligned_cols=79  Identities=18%  Similarity=0.323  Sum_probs=53.3

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++||++ |..||...........+.   ...       ......    ...+..+.+++.+||..+
T Consensus       176 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~---~~~-------~~~~~~----~~~~~~~~~li~~~l~~~  241 (257)
T cd05040         176 TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKID---KEG-------ERLERP----EACPQDIYNVMLQCWAHN  241 (257)
T ss_pred             CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---hcC-------CcCCCC----ccCCHHHHHHHHHHCCCC
Confidence            46778999999999999998 999986443332221111   000       000011    112346779999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||++.+++..+
T Consensus       242 p~~Rps~~~~~~~l  255 (257)
T cd05040         242 PADRPTFAALREFL  255 (257)
T ss_pred             cccCCCHHHHHHHh
Confidence            99999999998865

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.30  E-value=7.2e-12  Score=80.54  Aligned_cols=85  Identities=14%  Similarity=0.205  Sum_probs=56.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++++++|..||........ ..+..        ..... .....    ......+.+|+..||..+
T Consensus       177 ~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~--------~~~~~-~~~~~----~~~~~~~~~li~~~l~~~  243 (285)
T cd05632         177 RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDR--------RVLET-EEVYS----AKFSEEAKSICKMLLTKD  243 (285)
T ss_pred             CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH--------hhhcc-ccccC----ccCCHHHHHHHHHHccCC
Confidence            467789999999999999999999964432211 11111        00000 01111    112234568999999999


Q ss_pred             CCCCCC-----HHHHHHHHHHhhh
Q 039745           81 PAERPS-----VEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~-----~~~~~~~~~~~~~   99 (127)
                      |.+|++     +.+++.|.++...
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         244 PKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HhHcCCCcccChHHHHcChhhhcC
Confidence            999999     7899999887554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.30  E-value=5.3e-12  Score=79.42  Aligned_cols=81  Identities=16%  Similarity=0.317  Sum_probs=54.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||..... .......            ..........+......+.+++.+|+..+|.
T Consensus       180 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~  246 (260)
T cd06606         180 YGRAADIWSLGCTVIEMATGKPPWSELGN-PMAALYK------------IGSSGEPPEIPEHLSEEAKDFLRKCLRRDPK  246 (260)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHh------------ccccCCCcCCCcccCHHHHHHHHHhCcCChh
Confidence            56789999999999999999999865441 1111110            0000010111122245677999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||++.+++.|.|+
T Consensus       247 ~Rp~~~~ll~~~~~  260 (260)
T cd06606         247 KRPTADELLQHPFL  260 (260)
T ss_pred             hCCCHHHHhhCCCC
Confidence            99999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.30  E-value=2.9e-11  Score=78.40  Aligned_cols=84  Identities=13%  Similarity=0.272  Sum_probs=56.8

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||||++++|+++ |..||..........++.   ..     ..   ......    ....+.+++..||..+|
T Consensus       188 ~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~---~~-----~~---~~~~~~----~~~~~~~li~~c~~~~p  252 (303)
T cd05110         188 FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE---KG-----ER---LPQPPI----CTIDVYMVMVKCWMIDA  252 (303)
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---CC-----CC---CCCCCC----CCHHHHHHHHHHcCCCh
Confidence            5678999999999999997 888886543332222221   00     00   111111    22356789999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.+++..+.......
T Consensus       253 ~~Rp~~~~l~~~l~~~~~~~  272 (303)
T cd05110         253 DSRPKFKELAAEFSRMARDP  272 (303)
T ss_pred             hhCcCHHHHHHHHHHHHhch
Confidence            99999999999888655443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.29  E-value=1.7e-11  Score=79.82  Aligned_cols=83  Identities=17%  Similarity=0.293  Sum_probs=56.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.   ..        ......    ......+.+++.+||..+
T Consensus       212 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~----~~~~~~l~~li~~cl~~~  276 (314)
T cd05099         212 VYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLR---EG--------HRMDKP----SNCTHELYMLMRECWHAV  276 (314)
T ss_pred             CcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---cC--------CCCCCC----CCCCHHHHHHHHHHcCCC
Confidence            46778999999999999998 888886544332222221   00        001111    122335668999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++..+.....
T Consensus       277 p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         277 PTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             cccCcCHHHHHHHHHHHHH
Confidence            9999999999998886654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.29  E-value=3.9e-12  Score=82.22  Aligned_cols=86  Identities=16%  Similarity=0.244  Sum_probs=56.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||.............  ..         ..+..  ..+......+.+|+.+||..+|.
T Consensus       192 ~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~--~~---------~~~~~--~~~~~~~~~~~~li~~~l~~~p~  258 (297)
T cd06656         192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--TN---------GTPEL--QNPERLSAVFRDFLNRCLEMDVD  258 (297)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeec--cC---------CCCCC--CCccccCHHHHHHHHHHccCChh
Confidence            5678999999999999999999985433211100000  00         00000  01112223466899999999999


Q ss_pred             CCCCHHHHHHHHHHhhhcc
Q 039745           83 ERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +||++.+++.|.|+....+
T Consensus       259 ~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         259 RRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             hCcCHHHHhcCchhccccc
Confidence            9999999999998765544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.29  E-value=7.2e-12  Score=80.22  Aligned_cols=94  Identities=28%  Similarity=0.348  Sum_probs=56.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcC--------CcCc----ccccHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVD--------PAVN----KACLDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~~   69 (127)
                      ++.++|+|++|++++++++|+.||.... ......+..............+..        +...    ..........+
T Consensus       178 ~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (284)
T cd07836         178 YSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLG  257 (284)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHH
Confidence            5678999999999999999999985433 222222221111111101111100        0000    00011223457


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .+++.+|++.+|.+||++.+++.|.||
T Consensus       258 ~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         258 IDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            799999999999999999999988764

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=8.8e-12  Score=83.75  Aligned_cols=95  Identities=19%  Similarity=0.330  Sum_probs=69.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhchHHHhhhcCCc-----Ccccc-------cHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMVDPA-----VNKAC-------LDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~   68 (127)
                      .|+..+|+||+|||+.||+.|++.+. ....+++..++...+.+.....+..--|.     ....+       .......
T Consensus       296 ~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~  375 (560)
T KOG0600|consen  296 SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPAS  375 (560)
T ss_pred             ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHH
Confidence            58999999999999999999999985 55678888888777766553333110010     00111       1112346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .++|+..+|..||.+|.|+.+++.+-+|
T Consensus       376 ~l~Ll~~lL~ldP~kR~tA~~aL~seyF  403 (560)
T KOG0600|consen  376 ALDLLEKLLSLDPDKRGTASSALQSEYF  403 (560)
T ss_pred             HHHHHHHHhccCccccccHHHHhcCccc
Confidence            7899999999999999999999999988

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.29  E-value=6.4e-12  Score=80.60  Aligned_cols=83  Identities=12%  Similarity=0.181  Sum_probs=55.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|..||.............         ..........    ......+.+++.+||..+|.
T Consensus       173 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~  239 (279)
T cd05633         173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---------MTLTVNVELP----DSFSPELKSLLEGLLQRDVS  239 (279)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH---------HhhcCCcCCc----cccCHHHHHHHHHHhcCCHH
Confidence            6778999999999999999999985332211111110         0001111122    12234567999999999999


Q ss_pred             CCC-----CHHHHHHHHHHhh
Q 039745           83 ERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp-----~~~~~~~~~~~~~   98 (127)
                      +|+     +++++++|+|+..
T Consensus       240 ~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         240 KRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             HhcCCCCCCHHHHHhCccccC
Confidence            999     6999999998755

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.29  E-value=5.1e-12  Score=80.07  Aligned_cols=75  Identities=20%  Similarity=0.270  Sum_probs=49.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCC-CCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||+|++++|+++|. .|+............   .        .  ....+..    ....+.+++.+||+.+|
T Consensus       182 ~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~---~--------~--~~~~~~~----~~~~~~~li~~~l~~~p  244 (258)
T cd05078         182 LSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY---E--------D--RHQLPAP----KWTELANLINQCMDYEP  244 (258)
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH---H--------c--cccCCCC----CcHHHHHHHHHHhccCh
Confidence            577899999999999999984 555433322111111   0        0  0111111    12356799999999999


Q ss_pred             CCCCCHHHHHHHH
Q 039745           82 AERPSVEDVLWNL   94 (127)
Q Consensus        82 ~~Rp~~~~~~~~~   94 (127)
                      ++||++.++++.+
T Consensus       245 ~~Rps~~~il~~l  257 (258)
T cd05078         245 DFRPSFRAIIRDL  257 (258)
T ss_pred             hhCCCHHHHHHhc
Confidence            9999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.29  E-value=1.7e-11  Score=77.39  Aligned_cols=78  Identities=19%  Similarity=0.367  Sum_probs=53.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.   ..        .....    .......+.+++.+||..+
T Consensus       183 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~----~~~~~~~~~~li~~~l~~~  247 (262)
T cd00192         183 IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR---KG--------YRLPK----PEYCPDELYELMLSCWQLD  247 (262)
T ss_pred             CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---cC--------CCCCC----CccCChHHHHHHHHHccCC
Confidence            36778999999999999999 688886554332222210   00        00111    1122346779999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||++.+++.++
T Consensus       248 p~~Rps~~~l~~~l  261 (262)
T cd00192         248 PEDRPTFSELVERL  261 (262)
T ss_pred             cccCcCHHHHHHhh
Confidence            99999999999876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.29  E-value=1.1e-11  Score=79.00  Aligned_cols=82  Identities=18%  Similarity=0.280  Sum_probs=50.9

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||+|++++|+++ |+.||............  ...    .......+.....    ....+.+++..|| .+|
T Consensus       186 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P  254 (269)
T cd05087         186 QTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYT--VRE----QQLKLPKPRLKLP----LSDRWYEVMQFCW-LQP  254 (269)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHH--hhc----ccCCCCCCccCCC----CChHHHHHHHHHh-cCc
Confidence            4678999999999999996 99898644332221111  000    0011111221111    1234568889998 689


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.+++..+.
T Consensus       255 ~~Rpt~~~l~~~l~  268 (269)
T cd05087         255 EQRPSAEEVHLLLS  268 (269)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999987653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.29  E-value=3.5e-12  Score=84.03  Aligned_cols=96  Identities=22%  Similarity=0.331  Sum_probs=56.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchH-------HHhhhc-----CCcC-cccccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADES-------ARRSMV-----DPAV-NKACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~-~~~~~~~~~~~   68 (127)
                      ++.++|+||+||+++++++|+.||..... ................       ......     .+.. ...........
T Consensus       196 ~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (342)
T cd07854         196 YTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPE  275 (342)
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHH
Confidence            56789999999999999999999854322 2222221110000000       000000     0000 00000112245


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.+|+.+||..+|.+||++.+++.|.|+..
T Consensus       276 ~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         276 ALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             HHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            779999999999999999999999999853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.29  E-value=1.3e-11  Score=79.97  Aligned_cols=84  Identities=21%  Similarity=0.221  Sum_probs=55.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++|+++|..||.............         ......+....    .....+.+++.+||..+|
T Consensus       192 ~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~---------~~~~~~~~~~~----~~~~~~~~li~~~l~~~P  258 (305)
T cd05609         192 GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI---------SDDIEWPEGDE----ALPADAQDLISRLLRQNP  258 (305)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---------hcccCCCCccc----cCCHHHHHHHHHHhccCh
Confidence            35678999999999999999999986444332211110         00111111111    123356799999999999


Q ss_pred             CCCCC---HHHHHHHHHHhh
Q 039745           82 AERPS---VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~---~~~~~~~~~~~~   98 (127)
                      .+||+   +.+++.|+++..
T Consensus       259 ~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         259 LERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             hhccCccCHHHHHhCccccC
Confidence            99998   688888888744

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.29  E-value=8.5e-12  Score=81.26  Aligned_cols=82  Identities=20%  Similarity=0.340  Sum_probs=55.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++++++|..|+..... .......   .        . ..+....   ......+.+|+.+||+.+
T Consensus       196 ~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~---~--------~-~~~~~~~---~~~~~~l~~li~~~l~~~  260 (313)
T cd06633         196 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---Q--------N-DSPTLQS---NEWTDSFRGFVDYCLQKI  260 (313)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---h--------c-CCCCCCc---cccCHHHHHHHHHHccCC
Confidence            356789999999999999999999854432 2111111   0        0 0011111   111124668999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.+++.|.++..
T Consensus       261 P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         261 PQERPASAELLRHDFVRR  278 (313)
T ss_pred             hhhCcCHHHHhcCcccCC
Confidence            999999999999988654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.28  E-value=8.6e-12  Score=79.19  Aligned_cols=84  Identities=17%  Similarity=0.341  Sum_probs=55.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+|++|++++++++|..||..............       .......+.    .+......+.+++..||..+|
T Consensus       184 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p  252 (268)
T cd06630         184 QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFK-------IASATTAPS----IPEHLSPGLRDVTLRCLELQP  252 (268)
T ss_pred             CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHH-------HhccCCCCC----CchhhCHHHHHHHHHHcCCCc
Confidence            356789999999999999999999854332111111100       000011111    122233467789999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      ..||++.+++.|.++
T Consensus       253 ~~R~~~~~ll~~~~~  267 (268)
T cd06630         253 EDRPPSRELLKHPVF  267 (268)
T ss_pred             ccCcCHHHHhcCccc
Confidence            999999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.28  E-value=1.6e-11  Score=77.44  Aligned_cols=77  Identities=19%  Similarity=0.250  Sum_probs=54.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|+.||.............           ...-+..    .......+.+++.+||..+|.
T Consensus       178 ~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~----~~~~~~~~~~li~~~l~~~p~  242 (256)
T cd08530         178 YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ-----------RGKYPPI----PPIYSQDLQNFIRSMLQVKPK  242 (256)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-----------cCCCCCC----chhhCHHHHHHHHHHcCCCcc
Confidence            5678999999999999999999986554332221110           0000111    123345678999999999999


Q ss_pred             CCCCHHHHHHHH
Q 039745           83 ERPSVEDVLWNL   94 (127)
Q Consensus        83 ~Rp~~~~~~~~~   94 (127)
                      +||++.++++|+
T Consensus       243 ~Rp~~~~~l~~p  254 (256)
T cd08530         243 LRPNCDKILASP  254 (256)
T ss_pred             cCCCHHHHhcCC
Confidence            999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.28  E-value=1.4e-11  Score=80.10  Aligned_cols=81  Identities=16%  Similarity=0.259  Sum_probs=56.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++++++|..||........ ..+.    .       .  ......  .......+.+++.+||..+|
T Consensus       209 ~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~----~-------~--~~~~~~--~~~~~~~~~~li~~~l~~~p  273 (316)
T cd05574         209 HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNIL----K-------K--EVTFPG--SPPVSSSARDLIRKLLVKDP  273 (316)
T ss_pred             CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHh----c-------C--CccCCC--ccccCHHHHHHHHHHccCCH
Confidence            56789999999999999999999864432211 1111    0       0  000110  11133467799999999999


Q ss_pred             CCCCC----HHHHHHHHHHhh
Q 039745           82 AERPS----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~----~~~~~~~~~~~~   98 (127)
                      .+||+    +.+++.|.|+..
T Consensus       274 ~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         274 SKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             hHCCCchhhHHHHHcCchhhc
Confidence            99999    999999988754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.28  E-value=3.3e-12  Score=87.81  Aligned_cols=84  Identities=21%  Similarity=0.372  Sum_probs=62.4

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      |.|+-++||||+|+++.|+..+++|+. ....+.++.+..            --.|-+....+.   ..+.+|++.||++
T Consensus       200 GqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQ------------NesPtLqs~eWS---~~F~~Fvd~CLqK  264 (948)
T KOG0577|consen  200 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ------------NESPTLQSNEWS---DYFRNFVDSCLQK  264 (948)
T ss_pred             cccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHh------------cCCCCCCCchhH---HHHHHHHHHHHhh
Confidence            789999999999999999999999964 444454554441            111222222233   3567888899999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      -|++||+..+++.|.+....
T Consensus       265 ipqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  265 IPQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             CcccCCcHHHHhhcchhccC
Confidence            99999999999999887655

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.28  E-value=1.6e-11  Score=82.35  Aligned_cols=97  Identities=12%  Similarity=0.158  Sum_probs=72.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCc-------hhHHHHHHHHHHHHhhchHHHh------hhcCCc----------C-
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSR-------KEVDLLKNQLQAVITADESARR------SMVDPA----------V-   57 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~-------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----------~-   57 (127)
                      .|+..+||||++|+.||++||...|..       .+...+..++.+++..+.....      ...+.+          + 
T Consensus       427 gY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~W  506 (590)
T KOG1290|consen  427 GYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPW  506 (590)
T ss_pred             CCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCC
Confidence            488999999999999999999888742       3456777888777776652211      111100          0 


Q ss_pred             --------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           58 --------NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        58 --------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                              ...++.+...++.+|+.-+|+.+|.+|+++.+.++|+|...
T Consensus       507 pL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~  555 (590)
T KOG1290|consen  507 PLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNP  555 (590)
T ss_pred             cHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccC
Confidence                    12345677788999999999999999999999999999653

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.28  E-value=1.3e-11  Score=77.97  Aligned_cols=78  Identities=17%  Similarity=0.226  Sum_probs=53.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++||++|..||...........+.   .           .... .........+.+++.+||..+|.
T Consensus       178 ~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~---~-----------~~~~-~~~~~~~~~~~~~i~~~l~~~p~  242 (256)
T cd08221         178 YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIV---Q-----------GNYT-PVVSVYSSELISLVHSLLQQDPE  242 (256)
T ss_pred             CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---c-----------CCCC-CCccccCHHHHHHHHHHcccCcc
Confidence            4668999999999999999999986544322211110   0           0000 00122234577999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.+++.+++
T Consensus       243 ~R~s~~~ll~~~~  255 (256)
T cd08221         243 KRPTADEVLDQPL  255 (256)
T ss_pred             cCCCHHHHhhCcC
Confidence            9999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.28  E-value=7.2e-12  Score=80.23  Aligned_cols=85  Identities=15%  Similarity=0.247  Sum_probs=54.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++|..||........ .....           .......... .......+.+++.+||..+
T Consensus       170 ~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~li~~~L~~~  237 (277)
T cd05607         170 PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR-----------RTLEDEVKFE-HQNFTEESKDICRLFLAKK  237 (277)
T ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH-----------Hhhccccccc-cccCCHHHHHHHHHHhccC
Confidence            367899999999999999999999854322111 11110           0000000000 0112235679999999999


Q ss_pred             CCCCCCH----HHHHHHHHHhh
Q 039745           81 PAERPSV----EDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~----~~~~~~~~~~~   98 (127)
                      |.+||++    .+++.|.|+..
T Consensus       238 P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         238 PEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             HhhCCCCccchhhhhcChhhcC
Confidence            9999999    66778888743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.28  E-value=1.1e-11  Score=81.39  Aligned_cols=97  Identities=26%  Similarity=0.344  Sum_probs=59.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCc--------------CcccccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPA--------------VNKACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~   67 (127)
                      ++.++|+||+|++++++++|..||.... ......+....+......+.....+.              ...........
T Consensus       187 ~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (332)
T cd07857         187 YTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANP  266 (332)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCH
Confidence            5678999999999999999999985433 22222222222211111111111000              00000011134


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+.+|+.+||+.+|.+||++.+++.|.|+...
T Consensus       267 ~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         267 LALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            67799999999999999999999999997544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.28  E-value=2.3e-12  Score=84.94  Aligned_cols=80  Identities=18%  Similarity=0.213  Sum_probs=55.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+||+++||++|..||...........+   ..       ..  ...+...    ...+.+++.+||..+|.
T Consensus       205 ~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i---~~-------~~--~~~p~~~----~~~~~~li~~~l~~dp~  268 (340)
T PTZ00426        205 HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKI---LE-------GI--IYFPKFL----DNNCKHLMKKLLSHDLT  268 (340)
T ss_pred             CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHH---hc-------CC--CCCCCCC----CHHHHHHHHHHcccCHH
Confidence            678899999999999999999999654432221111   00       00  1111111    23456999999999999


Q ss_pred             CCC-----CHHHHHHHHHHhh
Q 039745           83 ERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp-----~~~~~~~~~~~~~   98 (127)
                      +|+     ++++++.|+|+..
T Consensus       269 ~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        269 KRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             HcCCCCCCCHHHHHcCCCcCC
Confidence            995     8999999998743

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.28  E-value=1.9e-11  Score=80.62  Aligned_cols=99  Identities=20%  Similarity=0.276  Sum_probs=59.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcC----------CcCcc----cccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVD----------PAVNK----ACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~----~~~~~~~~   67 (127)
                      ++.++|+||+|++++|+++|+.||..... .....+..............+.+          +....    ........
T Consensus       195 ~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (345)
T cd07877         195 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP  274 (345)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCH
Confidence            57789999999999999999999854332 22222221111111101110000          00000    00001234


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+.+++.+|+..+|.+|+++.+++.|.++.....
T Consensus       275 ~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~  308 (345)
T cd07877         275 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  308 (345)
T ss_pred             HHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence            5679999999999999999999999999765433

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.28  E-value=2.3e-11  Score=80.66  Aligned_cols=30  Identities=30%  Similarity=0.264  Sum_probs=27.0

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      .+..|+.+||..||.+||++.++++|+|+.
T Consensus       326 ~~~~li~~mL~~dP~~Rpta~e~l~hp~f~  355 (357)
T PHA03209        326 DGEFLVHKMLTFDAAMRPSAEEILNYPMFA  355 (357)
T ss_pred             hHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence            455799999999999999999999999975

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.28  E-value=2e-11  Score=78.77  Aligned_cols=85  Identities=16%  Similarity=0.290  Sum_probs=52.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh--CCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            2 KLEDKIDIYDFGLILLEIIV--GRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~--g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      .++.++|+||||++++|+++  +..||........ ...... ...   ...... .....    .....+.+|+.+||.
T Consensus       207 ~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~-~~~---~~~~~~-~~~~~----~~~~~l~~li~~~l~  277 (295)
T cd05097         207 KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEF-FRN---QGRQIY-LSQTP----LCPSPVFKLMMRCWS  277 (295)
T ss_pred             CcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHh-hhh---cccccc-CCCCC----CCCHHHHHHHHHHcC
Confidence            46789999999999999988  5566654332221 111100 000   000000 00111    112367799999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039745           79 KNPAERPSVEDVLWNLQ   95 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~   95 (127)
                      .+|.+||++.++++.+.
T Consensus       278 ~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         278 RDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             CCchhCcCHHHHHHHHh
Confidence            99999999999988763

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.28  E-value=7.9e-12  Score=79.23  Aligned_cols=84  Identities=19%  Similarity=0.311  Sum_probs=56.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||............. .       .........+    ......+.+++.+||..+|.
T Consensus       169 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~-------~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~  236 (262)
T cd05572         169 YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND-I-------LKGNGKLEFP----NYIDKAAKDLIKQLLRRNPE  236 (262)
T ss_pred             CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH-H-------hccCCCCCCC----cccCHHHHHHHHHHccCChh
Confidence            5678999999999999999999986444111111110 0       0000011111    11134677999999999999


Q ss_pred             CCCC-----HHHHHHHHHHhh
Q 039745           83 ERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~-----~~~~~~~~~~~~   98 (127)
                      +|++     +.++++|.|+..
T Consensus       237 ~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         237 ERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             hCcCCcccCHHHHhcChhhhC
Confidence            9999     999999999753

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.28  E-value=8e-12  Score=78.33  Aligned_cols=80  Identities=23%  Similarity=0.375  Sum_probs=53.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..|+.............           ....+.....  ......+.+++.+||..+|.
T Consensus       174 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~  240 (253)
T cd05122         174 YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIA-----------TNGPPGLRNP--EKWSDEFKDFLKKCLQKNPE  240 (253)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH-----------hcCCCCcCcc--cccCHHHHHHHHHHccCChh
Confidence            4678999999999999999999986543221111110           0000111110  11134577999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      .||++.+++.|.|
T Consensus       241 ~R~t~~~~l~~~~  253 (253)
T cd05122         241 KRPTAEQLLKHPF  253 (253)
T ss_pred             hCCCHHHHhcCCC
Confidence            9999999998753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.28  E-value=1.2e-11  Score=78.33  Aligned_cols=83  Identities=24%  Similarity=0.315  Sum_probs=55.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..|+...............        .....+.....   .....+.+++..||..+|.
T Consensus       177 ~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~  245 (264)
T cd06623         177 YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI--------CDGPPPSLPAE---EFSPEFRDFISACLQKDPK  245 (264)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH--------hcCCCCCCCcc---cCCHHHHHHHHHHccCChh
Confidence            567899999999999999999998544310111111100        01111111111   0234677999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      .||++.+++.|.++
T Consensus       246 ~R~~~~~ll~~~~~  259 (264)
T cd06623         246 KRPSAAELLQHPFI  259 (264)
T ss_pred             hCCCHHHHHhCHHH
Confidence            99999999999886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.28  E-value=3e-11  Score=76.61  Aligned_cols=83  Identities=19%  Similarity=0.292  Sum_probs=54.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++++++|+.||........ ....        ....-..+....   ......+.+++.+||..+|+
T Consensus       183 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~--------~~~~~~~~~~~~---~~~~~~~~~~i~~cl~~~p~  250 (267)
T cd08224         183 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCK--------KIEKCDYPPLPA---DHYSEELRDLVSRCINPDPE  250 (267)
T ss_pred             CCchhcHHHHHHHHHHHHHCCCCcccCCccHH-HHHh--------hhhcCCCCCCCh---hhcCHHHHHHHHHHcCCCcc
Confidence            56789999999999999999999854332111 1110        000000111111   12233567999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +||++.++++.+..+
T Consensus       251 ~Rp~~~~il~~~~~~  265 (267)
T cd08224         251 KRPDISYVLQVAKEM  265 (267)
T ss_pred             cCCCHHHHHHHHHHh
Confidence            999999998877643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.28  E-value=3e-12  Score=81.85  Aligned_cols=95  Identities=15%  Similarity=0.197  Sum_probs=54.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++||++|..|+......................+...................+.+++.+||..+|
T Consensus       188 ~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  267 (284)
T cd05038         188 KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEP  267 (284)
T ss_pred             CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccCh
Confidence            35678999999999999999998875322211100000000000000000000000000111223467799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.+++..+..
T Consensus       268 ~~Rpt~~ei~~~l~~  282 (284)
T cd05038         268 QDRPSFADLILIVDR  282 (284)
T ss_pred             hhCCCHHHHHHHHhh
Confidence            999999999988764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.28  E-value=8.6e-12  Score=78.77  Aligned_cols=76  Identities=18%  Similarity=0.206  Sum_probs=52.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|+++++|++|..||...........+           .........    ......+.+|+.+||..+|.
T Consensus       177 ~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~~P~  241 (255)
T cd08219         177 YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKV-----------CQGSYKPLP----SHYSYELRSLIKQMFKRNPR  241 (255)
T ss_pred             cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHH-----------hcCCCCCCC----cccCHHHHHHHHHHHhCCcc
Confidence            567899999999999999999999755433221111           000001111    11223567999999999999


Q ss_pred             CCCCHHHHHHH
Q 039745           83 ERPSVEDVLWN   93 (127)
Q Consensus        83 ~Rp~~~~~~~~   93 (127)
                      +||++.+++..
T Consensus       242 ~Rp~~~~il~~  252 (255)
T cd08219         242 SRPSATTILSR  252 (255)
T ss_pred             cCCCHHHHhhc
Confidence            99999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.27  E-value=9.2e-12  Score=80.23  Aligned_cols=96  Identities=18%  Similarity=0.246  Sum_probs=57.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhh------h--cCCcCcc----cccHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRS------M--VDPAVNK----ACLDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~----~~~~~~~~~~   69 (127)
                      ++.++|+||+|++++++++|+.||.... ......+..............      .  ..+....    .........+
T Consensus       181 ~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (294)
T PLN00009        181 YSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAG  260 (294)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHH
Confidence            5678999999999999999999985432 222222221111111100000      0  0000000    0011122356


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+++.+|+..+|.+||++.+++.|.|+..
T Consensus       261 ~~~i~~~l~~~P~~Rps~~~~l~~~~~~~  289 (294)
T PLN00009        261 VDLLSKMLRLDPSKRITARAALEHEYFKD  289 (294)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence            79999999999999999999999988643

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.27  E-value=1.1e-11  Score=79.75  Aligned_cols=94  Identities=24%  Similarity=0.288  Sum_probs=55.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh------c--------CCcCcccccHH-HH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM------V--------DPAVNKACLDE-SL   66 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~--------~~~~~~~~~~~-~~   66 (127)
                      ++.++|+||+|++++||++|..||..... .....+............+..      .        ........... ..
T Consensus       184 ~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (293)
T cd07843         184 YSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLS  263 (293)
T ss_pred             ccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCC
Confidence            46789999999999999999999864332 222222211111100000000      0        00000001111 23


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ..+.+++.+||..+|++||++.+++.|.||
T Consensus       264 ~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         264 DNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            456799999999999999999999998764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.27  E-value=9.3e-12  Score=82.03  Aligned_cols=99  Identities=21%  Similarity=0.353  Sum_probs=59.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhc--------C--CcCcc----cccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMV--------D--PAVNK----ACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~----~~~~~~~~   67 (127)
                      ++.++|+||+|++++++++|+.||..... .....+................        .  +....    ........
T Consensus       193 ~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  272 (343)
T cd07851         193 YNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANP  272 (343)
T ss_pred             CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCH
Confidence            56789999999999999999999854332 2222222111110000000000        0  00000    00001134


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+.+++.+||..+|.+||++.+++.|.|+.....
T Consensus       273 ~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         273 LAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             HHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence            6779999999999999999999999998765433

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.27  E-value=2.2e-11  Score=77.53  Aligned_cols=80  Identities=14%  Similarity=0.290  Sum_probs=53.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+.           .........    ..+..+.+++..||..+
T Consensus       187 ~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-----------~~~~~~~~~----~~~~~~~~li~~~l~~~  251 (269)
T cd05065         187 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-----------QDYRLPPPM----DCPTALHQLMLDCWQKD  251 (269)
T ss_pred             cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-----------cCCcCCCcc----cCCHHHHHHHHHHcCCC
Confidence            45778999999999999886 988986544322211110           000111111    12335668999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.+++..+..
T Consensus       252 p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         252 RNARPKFGQIVSTLDK  267 (269)
T ss_pred             hhhCcCHHHHHHHHHh
Confidence            9999999999887653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.27  E-value=9.9e-12  Score=79.55  Aligned_cols=94  Identities=16%  Similarity=0.264  Sum_probs=56.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcC--------Cc------CcccccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVD--------PA------VNKACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~------~~~~~~~~~~~   67 (127)
                      ++.++|||++|++++|+++|+.||....... ...+............+....        +.      ...........
T Consensus       179 ~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (287)
T cd07840         179 YGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDP  258 (287)
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCH
Confidence            5678999999999999999999986544322 222221111110000000000        00      00000000144


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .+.+++.+||..+|.+||++.+++.+.|+
T Consensus       259 ~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         259 SALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            67899999999999999999999988763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.26  E-value=3.8e-11  Score=76.47  Aligned_cols=82  Identities=16%  Similarity=0.270  Sum_probs=56.0

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||+|++++|+++ |..||...........+           ...........    ....+.+++.+|+..+|
T Consensus       185 ~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~li~~~l~~~P  249 (270)
T cd05056         185 FTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI-----------ENGERLPMPPN----CPPTLYSLMTKCWAYDP  249 (270)
T ss_pred             CCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-----------HcCCcCCCCCC----CCHHHHHHHHHHcCCCh
Confidence            5678999999999999986 99998654432221111           00001111111    23357789999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.+++..+..+..
T Consensus       250 ~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         250 SKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999998876543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.26  E-value=2.8e-11  Score=76.71  Aligned_cols=79  Identities=23%  Similarity=0.389  Sum_probs=53.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++++++ |..||...........+.           ........    ......+.+++.+||..+
T Consensus       179 ~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~~i~~~l~~~  243 (260)
T cd05073         179 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-----------RGYRMPRP----ENCPEELYNIMMRCWKNR  243 (260)
T ss_pred             CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-----------CCCCCCCc----ccCCHHHHHHHHHHcccC
Confidence            35678999999999999998 888886443322221110           00001111    122345779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       244 p~~Rp~~~~l~~~L~  258 (260)
T cd05073         244 PEERPTFEYIQSVLD  258 (260)
T ss_pred             cccCcCHHHHHHHHh
Confidence            999999999988765

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.26  E-value=1.3e-11  Score=84.57  Aligned_cols=89  Identities=21%  Similarity=0.316  Sum_probs=58.4

Q ss_pred             CCCCCchhHHHHHHHHHHHHh--CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV--GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      |+++.++|+|+||+++||+++  ...||.....++.   +...+.......++++     ...+..++..+.++|.+||.
T Consensus       714 gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~~~~~~~-----l~~P~~cp~~lyelml~Cw~  785 (807)
T KOG1094|consen  714 GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRDQGRQVV-----LSRPPACPQGLYELMLRCWR  785 (807)
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCCCCccee-----ccCCCcCcHHHHHHHHHHhc
Confidence            789999999999999999866  7778854332222   1111111100011111     11233455678899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHh
Q 039745           79 KNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~   97 (127)
                      .+..+||+++++..++...
T Consensus       786 ~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  786 RESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             hhhhcCCCHHHHHHHHHHh
Confidence            9999999999998877643

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.26  E-value=3.8e-11  Score=76.85  Aligned_cols=75  Identities=24%  Similarity=0.387  Sum_probs=51.0

Q ss_pred             CCCchhHHHHHHHHHHHH-hCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||||+++||++ +|..|+..............          .   .......    ...+.+++.+||..+|
T Consensus       198 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----------~---~~~~~~~----~~~~~~li~~cl~~~p  260 (274)
T cd05076         198 LSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK----------K---HRLPEPS----CKELATLISQCLTYEP  260 (274)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh----------c---cCCCCCC----ChHHHHHHHHHcccCh
Confidence            678899999999999995 68888854433222221100          0   0111111    1256789999999999


Q ss_pred             CCCCCHHHHHHHH
Q 039745           82 AERPSVEDVLWNL   94 (127)
Q Consensus        82 ~~Rp~~~~~~~~~   94 (127)
                      .+||++.++++++
T Consensus       261 ~~Rps~~~il~~L  273 (274)
T cd05076         261 TQRPSFRTILRDL  273 (274)
T ss_pred             hhCcCHHHHHHhh
Confidence            9999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.26  E-value=3.1e-11  Score=76.45  Aligned_cols=78  Identities=23%  Similarity=0.355  Sum_probs=52.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++|+||+|++++++++ |+.||....... ...+.            .........    .....+.+++.+||..
T Consensus       180 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~------------~~~~~~~~~----~~~~~~~~~i~~~l~~  243 (261)
T cd05034         180 RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE------------RGYRMPRPP----NCPEELYDLMLQCWDK  243 (261)
T ss_pred             CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH------------cCCCCCCCC----CCCHHHHHHHHHHccc
Confidence            35678999999999999998 898885433221 11111            000011111    1134567999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQ   95 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~   95 (127)
                      +|.+||++.++...+.
T Consensus       244 ~p~~Rp~~~~l~~~l~  259 (261)
T cd05034         244 DPEERPTFEYLQSFLE  259 (261)
T ss_pred             CcccCCCHHHHHHHHh
Confidence            9999999999987664

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.26  E-value=4.9e-13  Score=87.43  Aligned_cols=81  Identities=15%  Similarity=0.260  Sum_probs=57.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||...........+.   .         .....+...    ...+.+|+.+||..+|
T Consensus       172 ~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~---~---------~~~~~p~~~----~~~~~~li~~~L~~dP  235 (325)
T cd05594         172 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---M---------EEIRFPRTL----SPEAKSLLSGLLKKDP  235 (325)
T ss_pred             CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh---c---------CCCCCCCCC----CHHHHHHHHHHhhcCH
Confidence            47789999999999999999999996544332222220   0         011111112    2356699999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+|+     ++.+++.|.|+..
T Consensus       236 ~~R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         236 KQRLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             HHhCCCCCCCHHHHhcCCCcCC
Confidence            9997     8999999988653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.26  E-value=5.1e-11  Score=76.93  Aligned_cols=87  Identities=17%  Similarity=0.330  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++++++|..||.............           ....+....  .......+.+++.+||..+|
T Consensus       192 ~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~l~~li~~~l~~~P  258 (292)
T cd06657         192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-----------DNLPPKLKN--LHKVSPSLKGFLDRLLVRDP  258 (292)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-----------hhCCcccCC--cccCCHHHHHHHHHHHhCCc
Confidence            35778999999999999999999986443222111110           001111110  01122346689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.+++.|.++.....
T Consensus       259 ~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         259 AQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             ccCcCHHHHhcChHHhccCC
Confidence            99999999999998766553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.26  E-value=6.6e-12  Score=80.78  Aligned_cols=99  Identities=21%  Similarity=0.268  Sum_probs=70.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhchHHHhhhcC-----CcC---c-c-cccH---HHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMVD-----PAV---N-K-ACLD---ESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~-~-~~~~---~~~~   67 (127)
                      .|+..+||||+||+++||+++++.|. ..+..++..+...++.+.....+.+..     ...   . . ....   ....
T Consensus       197 ~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~  276 (323)
T KOG0594|consen  197 SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDP  276 (323)
T ss_pred             cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCc
Confidence            48899999999999999999998884 556677777777666554433333321     000   0 0 0011   1113


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      ...+++.++++++|.+|.++..++.|.+|....
T Consensus       277 ~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  277 DGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             cHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            678999999999999999999999999876543

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.26  E-value=2.9e-11  Score=76.39  Aligned_cols=79  Identities=19%  Similarity=0.364  Sum_probs=53.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |+.||...........+.           ........    ......+.+++.+||..+
T Consensus       173 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~li~~~l~~~  237 (254)
T cd05083         173 KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE-----------KGYRMEPP----EGCPADVYVLMTSCWETE  237 (254)
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-----------CCCCCCCC----CcCCHHHHHHHHHHcCCC
Confidence            46678999999999999997 888886544332222110           00001111    112345679999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |..||++.+++..+.
T Consensus       238 p~~Rp~~~~l~~~l~  252 (254)
T cd05083         238 PKKRPSFHKLREKLE  252 (254)
T ss_pred             hhhCcCHHHHHHHHc
Confidence            999999999988653

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.26  E-value=9.3e-12  Score=79.37  Aligned_cols=81  Identities=14%  Similarity=0.201  Sum_probs=54.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH--HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL--KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++|+||+|++++|+++|..||........  ..+..        ...  .....    .......+.+|+.+||+.
T Consensus       182 ~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~--~~~~~----~~~~~~~~~~li~~~l~~  247 (267)
T PHA03390        182 NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK--------RQQ--KKLPF----IKNVSKNANDFVQSMLKY  247 (267)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH--------hhc--ccCCc----ccccCHHHHHHHHHHhcc
Confidence            467789999999999999999999863322211  11110        000  00111    112334677999999999


Q ss_pred             CCCCCCC-HHHHHHHHHH
Q 039745           80 NPAERPS-VEDVLWNLQF   96 (127)
Q Consensus        80 ~p~~Rp~-~~~~~~~~~~   96 (127)
                      +|.+|++ ++++++|.|+
T Consensus       248 ~p~~R~~~~~~~l~h~~~  265 (267)
T PHA03390        248 NINYRLTNYNEIIKHPFL  265 (267)
T ss_pred             ChhhCCchHHHHhcCCcc
Confidence            9999996 6999999875

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.25  E-value=1.3e-11  Score=81.25  Aligned_cols=82  Identities=17%  Similarity=0.311  Sum_probs=60.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .+..+|+|+||+++|||+.|..||. ......+.+++.          .   ++.++..  ......+.+|+.++|.+||
T Consensus       312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~----------~---~l~Fp~~--~~vs~~akDLIr~LLvKdP  376 (459)
T KOG0610|consen  312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG----------Q---PLKFPEE--PEVSSAAKDLIRKLLVKDP  376 (459)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc----------C---CCcCCCC--CcchhHHHHHHHHHhccCh
Confidence            4578999999999999999999994 444444554441          0   1112111  1344567799999999999


Q ss_pred             CCCCC----HHHHHHHHHHhhh
Q 039745           82 AERPS----VEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~----~~~~~~~~~~~~~   99 (127)
                      .+|..    +.++.+|++|-.-
T Consensus       377 ~kRlg~~rGA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  377 SKRLGSKRGAAEIKRHPFFEGV  398 (459)
T ss_pred             hhhhccccchHHhhcCccccCC
Confidence            99987    9999999987554

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.25  E-value=7.7e-12  Score=84.38  Aligned_cols=83  Identities=18%  Similarity=0.239  Sum_probs=59.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      |+..+|+||+||++|||+.|.+||........ ..+..+...        +..|.-     .....+.++|+.+|+. +|
T Consensus       365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~--------l~fP~~-----~~~s~eA~DLI~rll~-d~  430 (550)
T KOG0605|consen  365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET--------LKFPEE-----VDLSDEAKDLITRLLC-DP  430 (550)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh--------ccCCCc-----CcccHHHHHHHHHHhc-CH
Confidence            78999999999999999999999976665444 333322111        111111     1112467799999999 99


Q ss_pred             CCCC---CHHHHHHHHHHhhh
Q 039745           82 AERP---SVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp---~~~~~~~~~~~~~~   99 (127)
                      .+|.   .+.++..|+||-.-
T Consensus       431 ~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  431 ENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             HHhcCcccHHHHhcCCccccC
Confidence            9996   59999999997543

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=9.9e-12  Score=85.93  Aligned_cols=81  Identities=20%  Similarity=0.304  Sum_probs=59.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+..+|+|+||+++|||+.|..||.+.+.+.+-..+   ..      ..   +    .++.....+..+++.++|..+|
T Consensus       544 ~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI---~~------d~---~----~yP~~ls~ea~~il~~ll~k~p  607 (694)
T KOG0694|consen  544 SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSI---VN------DE---V----RYPRFLSKEAIAIMRRLLRKNP  607 (694)
T ss_pred             cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---hc------CC---C----CCCCcccHHHHHHHHHHhccCc
Confidence            5899999999999999999999999766654442222   00      01   1    1233445567799999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|.-     +.++..|++|..
T Consensus       608 ~kRLG~~e~d~~~i~~hpFFr~  629 (694)
T KOG0694|consen  608 EKRLGSGERDAEDIKKHPFFRS  629 (694)
T ss_pred             ccccCCCCCCchhhhhCCcccc
Confidence            99975     577888888744

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.25  E-value=1.6e-11  Score=77.71  Aligned_cols=81  Identities=20%  Similarity=0.286  Sum_probs=53.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||............  .        .....+..+..  ........+++.+||..+|.
T Consensus       183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~--~--------~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~  250 (264)
T cd06626         183 HGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH--V--------GAGHKPPIPDS--LQLSPEGKDFLDRCLESDPK  250 (264)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH--H--------hcCCCCCCCcc--cccCHHHHHHHHHHccCCcc
Confidence            677899999999999999999998643211111110  0        00011111111  11234566899999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.+++.|.|
T Consensus       251 ~R~~~~~i~~~~~  263 (264)
T cd06626         251 KRPTASELLQHPF  263 (264)
T ss_pred             cCCCHHHHhcCCC
Confidence            9999999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.25  E-value=1e-11  Score=79.42  Aligned_cols=85  Identities=21%  Similarity=0.314  Sum_probs=55.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+|++|++++++++|+.||...........+..       .... ......    ......+.+++.+||..+|
T Consensus       170 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------~~~~-~~~~~~----~~~~~~~~~li~~~l~~~p  237 (277)
T cd05577         170 VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR-------RTLE-MAVEYP----DKFSPEAKDLCEALLQKDP  237 (277)
T ss_pred             CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh-------cccc-ccccCC----ccCCHHHHHHHHHHccCCh
Confidence            356789999999999999999999864432111111100       0000 001111    1123356799999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+||     ++.+++.|.|+..
T Consensus       238 ~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         238 EKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             hHccCCCcccHHHHHhChhhhc
Confidence            9999     8888999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.25  E-value=1e-11  Score=79.49  Aligned_cols=94  Identities=19%  Similarity=0.260  Sum_probs=55.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHH------HhhhcC----CcCc---ccccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESA------RRSMVD----PAVN---KACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~----~~~~---~~~~~~~~~~   68 (127)
                      ++.++|+||||++++|+++|+.||..... .................      +.....    ....   ..........
T Consensus       176 ~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (283)
T cd07830         176 YSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPE  255 (283)
T ss_pred             cCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHH
Confidence            56789999999999999999988853322 22222221111110000      000000    0000   0000111346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      +.+++.+||..+|.+||++.+++.|.|+
T Consensus       256 ~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         256 AIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             HHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            7899999999999999999999988763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.25  E-value=1.1e-11  Score=78.03  Aligned_cols=78  Identities=21%  Similarity=0.267  Sum_probs=54.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..|+............           .....+....    .....+.+++..||..+|+
T Consensus       180 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~~~i~~~l~~~p~  244 (258)
T cd08215         180 YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI-----------LKGQYPPIPS----QYSSELRNLVSSLLQKDPE  244 (258)
T ss_pred             CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH-----------hcCCCCCCCC----CCCHHHHHHHHHHcCCChh
Confidence            567899999999999999999998654432221111           0000111111    2234567999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.+++.|.+
T Consensus       245 ~Rp~~~~ll~~~~  257 (258)
T cd08215         245 ERPSIAQILQSPF  257 (258)
T ss_pred             hCcCHHHHhcCCC
Confidence            9999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.25  E-value=1.1e-11  Score=78.25  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=53.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|+.||.......  .......        ....+...    ......+.+++.+||..+|.
T Consensus       179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~--------~~~~~~~~----~~~~~~~~~li~~~l~~~p~  244 (258)
T cd06632         179 YGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AVFKIGR--------SKELPPIP----DHLSDEAKDFILKCLQRDPS  244 (258)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HHHHHHh--------cccCCCcC----CCcCHHHHHHHHHHhhcCcc
Confidence            5778999999999999999999986443211  1111000        00011111    11234566899999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.+++.|.+
T Consensus       245 ~Rp~~~~~l~~~~  257 (258)
T cd06632         245 LRPTAAELLEHPF  257 (258)
T ss_pred             cCcCHHHHhcCCC
Confidence            9999999998864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.25  E-value=8.2e-12  Score=80.14  Aligned_cols=96  Identities=13%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++|+++++.+...........................................+.+|+.+||..+|
T Consensus       188 ~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  267 (284)
T cd05079         188 KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQP  267 (284)
T ss_pred             CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCc
Confidence            36678999999999999999766542111000000000000000000000000000000011223467799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.+++..+..+
T Consensus       268 ~~Rpt~~~il~~l~~~  283 (284)
T cd05079         268 SKRTTFQNLIEGFEAI  283 (284)
T ss_pred             ccCcCHHHHHHHHHhh
Confidence            9999999999987643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.25  E-value=8e-12  Score=79.71  Aligned_cols=78  Identities=14%  Similarity=0.286  Sum_probs=53.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..|+............   ..         .......    .....+.+|+.+||..+|.
T Consensus       199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~---------~~~~~~~----~~~~~~~~li~~~l~~~p~  262 (280)
T cd05581         199 AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI---LK---------LEYSFPP----NFPPDAKDLIEKLLVLDPQ  262 (280)
T ss_pred             CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH---Hh---------cCCCCCC----ccCHHHHHHHHHHhcCCHh
Confidence            567899999999999999999998654422211111   00         0011111    1134567999999999999


Q ss_pred             CCCCH----HHHHHHHHH
Q 039745           83 ERPSV----EDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~----~~~~~~~~~   96 (127)
                      +||++    .+++.|.++
T Consensus       263 ~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         263 DRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             hCCCcccCHHHHhcCCCC
Confidence            99999    999988764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.24  E-value=2.9e-11  Score=85.72  Aligned_cols=86  Identities=15%  Similarity=0.254  Sum_probs=64.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      +|+.++|||+||+.+||++| |..|++.........++....            .   -..++.+...++-+|.+||..|
T Consensus       876 ~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge------------R---LsqPpiCtiDVy~~mvkCwmid  940 (1177)
T KOG1025|consen  876 KYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE------------R---LSQPPICTIDVYMVMVKCWMID  940 (1177)
T ss_pred             CCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc------------c---CCCCCCccHHHHHHHHHHhccC
Confidence            68999999999999999999 999998777665555542111            1   1223456667889999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      +..||+++++..........+.
T Consensus       941 ~~~rp~fkel~~~fs~~ardpq  962 (1177)
T KOG1025|consen  941 ADSRPTFKELAEEFSRMARDPQ  962 (1177)
T ss_pred             cccCccHHHHHHHHHHHhcCcc
Confidence            9999999999877665554433

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.24  E-value=1.5e-11  Score=78.91  Aligned_cols=95  Identities=12%  Similarity=0.203  Sum_probs=52.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHH-hhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVI-TADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|++++..++................ ......+...................+.+|+.+||..+
T Consensus       187 ~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  266 (284)
T cd05081         187 KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNND  266 (284)
T ss_pred             CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCC
Confidence            46778999999999999999876643222111100000000 00000000111000000011122345779999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.+++..+..
T Consensus       267 p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         267 PSQRPSFSELALQVEA  282 (284)
T ss_pred             hhhCCCHHHHHHHHHh
Confidence            9999999999988763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.24  E-value=2.9e-12  Score=83.76  Aligned_cols=79  Identities=13%  Similarity=0.223  Sum_probs=54.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||...........+   ..       .  ........    ...+.+++.+||..+|
T Consensus       172 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i---~~-------~--~~~~~~~~----~~~~~~li~~~l~~~p  235 (323)
T cd05575         172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI---LN-------K--PLRLKPNI----SVSARHLLEGLLQKDR  235 (323)
T ss_pred             CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHH---Hc-------C--CCCCCCCC----CHHHHHHHHHHhhcCH
Confidence            4678999999999999999999999654433222111   00       0  01111111    3356799999999999


Q ss_pred             CCCCCH----HHHHHHHHH
Q 039745           82 AERPSV----EDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~----~~~~~~~~~   96 (127)
                      .+|+++    .+++.|+|+
T Consensus       236 ~~R~~~~~~~~~il~~~~~  254 (323)
T cd05575         236 TKRLGAKDDFLEIKNHVFF  254 (323)
T ss_pred             HhCCCCCCCHHHHHcCCCc
Confidence            999987    588888775

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.24  E-value=3e-11  Score=81.32  Aligned_cols=81  Identities=16%  Similarity=0.247  Sum_probs=54.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++|+||+|++++|+++ |..||....... ....+   ...        ..+..+    ......+.+|+.+||..
T Consensus       317 ~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~---~~~--------~~~~~p----~~~~~~l~~li~~cl~~  381 (401)
T cd05107         317 LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI---KRG--------YRMAKP----AHASDEIYEIMQKCWEE  381 (401)
T ss_pred             CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHH---HcC--------CCCCCC----CCCCHHHHHHHHHHcCC
Confidence            35778999999999999998 888885433211 11111   000        001111    11234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|..||++.+++..+..+
T Consensus       382 ~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         382 KFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             ChhHCcCHHHHHHHHHHH
Confidence            999999999999988754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.24  E-value=4.2e-11  Score=77.06  Aligned_cols=81  Identities=15%  Similarity=0.212  Sum_probs=54.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..||...........+   ...        .......    .....+.+++.+||..+
T Consensus       197 ~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~---~~~--------~~~~~~~----~~~~~~~~li~~~l~~~  261 (288)
T cd05061         197 VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV---MDG--------GYLDQPD----NCPERVTDLMRMCWQFN  261 (288)
T ss_pred             CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HcC--------CCCCCCC----CCCHHHHHHHHHHcCCC
Confidence            46788999999999999998 77788644332221111   000        0011111    12346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.++++.+...
T Consensus       262 p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         262 PKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             hhHCcCHHHHHHHHHhh
Confidence            99999999998877643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.24  E-value=5.5e-11  Score=81.26  Aligned_cols=30  Identities=27%  Similarity=0.314  Sum_probs=27.6

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      .+.+|+.+||..||.+||++.++++|.||.
T Consensus       430 ~~~dli~~mL~~DP~~RPsa~elL~hp~f~  459 (461)
T PHA03211        430 DVEYLVCRALTFDGARRPSAAELLRLPLFQ  459 (461)
T ss_pred             hHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence            567899999999999999999999999874

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.24  E-value=1e-11  Score=81.28  Aligned_cols=81  Identities=20%  Similarity=0.363  Sum_probs=54.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++||++|+.||...........+.   .         .....+.    .....+.+++.+||..+|
T Consensus       177 ~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~---~---------~~~~~p~----~~~~~~~~li~~~l~~~p  240 (323)
T cd05615         177 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM---E---------HNVSYPK----SLSKEAVSICKGLMTKHP  240 (323)
T ss_pred             CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH---h---------CCCCCCc----cCCHHHHHHHHHHcccCH
Confidence            36789999999999999999999997554332222110   0         0011111    122356789999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|++     ..++..|.++..
T Consensus       241 ~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         241 SKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             hhCCCCCCCCHHHHhcCcccCC
Confidence            99997     467888876543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.23  E-value=3.8e-11  Score=80.79  Aligned_cols=81  Identities=22%  Similarity=0.343  Sum_probs=54.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||||++++|+++ |..||...... .....+           ..-......    ......+.+++.+||..
T Consensus       315 ~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~l~~li~~cl~~  379 (400)
T cd05105         315 LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI-----------KSGYRMAKP----DHATQEVYDIMVKCWNS  379 (400)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH-----------hcCCCCCCC----ccCCHHHHHHHHHHCcc
Confidence            46789999999999999997 88887543221 111111           000111111    12234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|.+||++.++.+.+..+
T Consensus       380 dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         380 EPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             CHhHCcCHHHHHHHHHHH
Confidence            999999999999888754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.23  E-value=1.3e-11  Score=80.21  Aligned_cols=94  Identities=18%  Similarity=0.257  Sum_probs=54.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH----------HHHHHHHHHHhhchHHH---------hh---hcC-CcCcc
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD----------LLKNQLQAVITADESAR---------RS---MVD-PAVNK   59 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~----------~~~~~~~~~~~~~~~~~---------~~---~~~-~~~~~   59 (127)
                      ++.++|+||+|++++++++|+.||......          .+..+............         ..   ... .....
T Consensus       193 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (316)
T cd07842         193 YTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS  272 (316)
T ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC
Confidence            567899999999999999999998533221          11111111110000000         00   000 00000


Q ss_pred             cc-cH------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           60 AC-LD------ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        60 ~~-~~------~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      .. ..      .....+.+++.+||..+|.+||++.+++.|.||
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         273 NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            00 00      122357899999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.23  E-value=5.9e-12  Score=82.56  Aligned_cols=82  Identities=13%  Similarity=0.200  Sum_probs=54.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++||++|..||...... ....+..        .+. ..++......    ...+.+++.+||..+|
T Consensus       184 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~----~~~~~~li~~~l~~dp  250 (332)
T cd05614         184 HGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR--------RIL-KCDPPFPSFI----GPEAQDLLHKLLRKDP  250 (332)
T ss_pred             CCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH--------HHh-cCCCCCCCCC----CHHHHHHHHHHcCCCH
Confidence            567899999999999999999998532211 1111110        000 0112222222    2346689999999999


Q ss_pred             CCCC-----CHHHHHHHHHHh
Q 039745           82 AERP-----SVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~   97 (127)
                      .+|+     +++++++|.|+.
T Consensus       251 ~~R~~~~~~~~~~~l~h~~~~  271 (332)
T cd05614         251 KKRLGAGPQGASEIKEHPFFK  271 (332)
T ss_pred             HHcCCCCCCCHHHHHcCCCcC
Confidence            9999     788999998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.23  E-value=5.8e-11  Score=76.00  Aligned_cols=83  Identities=14%  Similarity=0.275  Sum_probs=56.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |+.||...........+.   ..        ........    ....+.+++..||..+
T Consensus       187 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~~~----~~~~~~~~~~~~l~~~  251 (279)
T cd05057         187 IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE---KG--------ERLPQPPI----CTIDVYMVLVKCWMID  251 (279)
T ss_pred             CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh---CC--------CCCCCCCC----CCHHHHHHHHHHcCCC
Confidence            35678999999999999998 999986554433322221   00        00111111    2235668999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |..||++.+++..+.....
T Consensus       252 p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         252 AESRPTFKELINEFSKMAR  270 (279)
T ss_pred             hhhCCCHHHHHHHHHHHHh
Confidence            9999999999988876544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.23  E-value=3.9e-11  Score=79.12  Aligned_cols=84  Identities=18%  Similarity=0.289  Sum_probs=55.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+|++|++++++++ |..|+........  ........        .....+..    ....+.+++..||+.+
T Consensus       257 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~~~~--------~~~~~~~~----~~~~~~~~~~~cl~~~  322 (343)
T cd05103         257 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEG--------TRMRAPDY----TTPEMYQTMLDCWHGE  322 (343)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HHHHHhcc--------CCCCCCCC----CCHHHHHHHHHHccCC
Confidence            36778999999999999997 8888854322111  11000000        00111111    1235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++++..+.+
T Consensus       323 p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         323 PSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999886543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.23  E-value=9.4e-12  Score=78.73  Aligned_cols=81  Identities=12%  Similarity=0.149  Sum_probs=54.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||..........+....        .. ..+...    ......+.+++.+||..+|.
T Consensus       176 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--------~~-~~~~~~----~~~~~~~~~~i~~~l~~~p~  242 (258)
T cd05578         176 YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ--------ET-ADVLYP----ATWSTEAIDAINKLLERDPQ  242 (258)
T ss_pred             CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh--------cc-ccccCc----ccCcHHHHHHHHHHccCChh
Confidence            567899999999999999999998654422111111100        00 111111    11235677999999999999


Q ss_pred             CCCCH--HHHHHHHHH
Q 039745           83 ERPSV--EDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~--~~~~~~~~~   96 (127)
                      +|+++  ++++.|.|+
T Consensus       243 ~R~~~~~~~l~~~~~~  258 (258)
T cd05578         243 KRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HcCCccHHHHhcCCCC
Confidence            99999  888877653

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.23  E-value=3.1e-11  Score=77.37  Aligned_cols=83  Identities=10%  Similarity=0.125  Sum_probs=56.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|+.||.............         ......+.....    ....+.+++.+|+..+|.
T Consensus       173 ~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~----~s~~~~~li~~~l~~~p~  239 (278)
T cd05606         173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---------MTLTMAVELPDS----FSPELRSLLEGLLQRDVN  239 (278)
T ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH---------HhhccCCCCCCc----CCHHHHHHHHHHhhcCHH
Confidence            6788999999999999999999986442111111110         000111122211    234567999999999999


Q ss_pred             CCC-----CHHHHHHHHHHhh
Q 039745           83 ERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp-----~~~~~~~~~~~~~   98 (127)
                      .|+     ++.++++|.|+..
T Consensus       240 ~R~~~~~~~~~~ll~~~~~~~  260 (278)
T cd05606         240 RRLGCLGRGAQEVKEHPFFRS  260 (278)
T ss_pred             hccCCCCCCHHHHHhCccccC
Confidence            999     9999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.22  E-value=6.2e-12  Score=82.46  Aligned_cols=83  Identities=17%  Similarity=0.240  Sum_probs=54.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-----H-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-----D-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVR   75 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   75 (127)
                      .++.++|+||+|++++|+++|+.||.....     . ..........       .  .....+...    ...+.+++.+
T Consensus       172 ~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~p~~~----~~~~~~li~~  238 (329)
T cd05588         172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL-------E--KQIRIPRSL----SVKASSVLKG  238 (329)
T ss_pred             CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH-------c--CCCCCCCCC----CHHHHHHHHH
Confidence            467899999999999999999999852110     0 0000110000       0  011111122    2356689999


Q ss_pred             hcccCCCCCCC------HHHHHHHHHHh
Q 039745           76 CLLKNPAERPS------VEDVLWNLQFA   97 (127)
Q Consensus        76 cl~~~p~~Rp~------~~~~~~~~~~~   97 (127)
                      ||..+|.+|++      +.+++.|.|+.
T Consensus       239 ~L~~dP~~R~~~~~~~~~~~i~~hp~~~  266 (329)
T cd05588         239 FLNKDPKERLGCHPQTGFRDIKSHPFFR  266 (329)
T ss_pred             HhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence            99999999987      78999999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=1.1e-10  Score=73.97  Aligned_cols=77  Identities=17%  Similarity=0.241  Sum_probs=53.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||+.-.+||.+.+...+...+.           +.--+..+.   ..-...+..|+..|+..|+
T Consensus       204 ~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~-----------qgd~~~~p~---~~YS~~l~~li~~ci~vd~  269 (375)
T KOG0591|consen  204 GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIE-----------QGDYPPLPD---EHYSTDLRELINMCIAVDP  269 (375)
T ss_pred             CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHH-----------cCCCCCCcH---HHhhhHHHHHHHHHccCCc
Confidence            48999999999999999999999997665544443331           111122221   2334466788899999999


Q ss_pred             CCCCCHHHHHH
Q 039745           82 AERPSVEDVLW   92 (127)
Q Consensus        82 ~~Rp~~~~~~~   92 (127)
                      ..||+.-.++.
T Consensus       270 ~~RP~t~~~v~  280 (375)
T KOG0591|consen  270 EQRPDTVPYVQ  280 (375)
T ss_pred             ccCCCcchHHH
Confidence            99998544443

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.22  E-value=2.4e-11  Score=76.87  Aligned_cols=81  Identities=17%  Similarity=0.299  Sum_probs=54.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||............   ..       ..  .......  .....+.+++..||+.+|.
T Consensus       178 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~-------~~--~~~~~~~--~~~~~~~~~i~~~l~~~p~  243 (265)
T cd05579         178 HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI---LN-------GK--IEWPEDV--EVSDEAIDLISKLLVPDPE  243 (265)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hc-------CC--cCCCccc--cCCHHHHHHHHHHhcCCHh
Confidence            456899999999999999999998654433221111   00       00  0011000  0134667999999999999


Q ss_pred             CCCCH---HHHHHHHHHh
Q 039745           83 ERPSV---EDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~---~~~~~~~~~~   97 (127)
                      +||++   .+++.|.|+.
T Consensus       244 ~Rpt~~~~~~~l~~~~~~  261 (265)
T cd05579         244 KRLGAKSIEEIKNHPFFK  261 (265)
T ss_pred             hcCCCccHHHHhcCcccc
Confidence            99999   8888888763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.22  E-value=9.3e-12  Score=82.90  Aligned_cols=84  Identities=15%  Similarity=0.189  Sum_probs=56.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+||+++||++|+.||...........+   ....    ...   ..+.  .......+.+|+.+||..+|.
T Consensus       224 ~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i---~~~~----~~~---~~~~--~~~~s~~~~~li~~~L~~~p~  291 (370)
T cd05596         224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI---MDHK----NSL---TFPD--DIEISKQAKDLICAFLTDREV  291 (370)
T ss_pred             CCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH---HcCC----CcC---CCCC--cCCCCHHHHHHHHHHccChhh
Confidence            678999999999999999999999654432221111   0000    000   1111  011234566899999998898


Q ss_pred             C--CCCHHHHHHHHHHhh
Q 039745           83 E--RPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~--Rp~~~~~~~~~~~~~   98 (127)
                      +  |+++.+++.|+|+..
T Consensus       292 r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         292 RLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             ccCCCCHHHHhcCcccCC
Confidence            7  999999999998754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.22  E-value=2.7e-11  Score=79.49  Aligned_cols=98  Identities=17%  Similarity=0.275  Sum_probs=59.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCC---------cCccccc-----HHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDP---------AVNKACL-----DESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-----~~~~   66 (127)
                      .++.++|+|++|++++++++|+.||..... .....+....+....+........         ......+     ....
T Consensus       182 ~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (328)
T cd07856         182 KYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNAD  261 (328)
T ss_pred             CcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCC
Confidence            367889999999999999999999854332 111222221111111111110000         0000000     1123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+++.+||..+|.+||++.+++.|.++...
T Consensus       262 ~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         262 PSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence            467799999999999999999999999987443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.21  E-value=1.6e-11  Score=77.17  Aligned_cols=78  Identities=15%  Similarity=0.251  Sum_probs=53.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..||...........+           .. ........    ....+.+++.+||..+|.
T Consensus       170 ~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~-----------~~-~~~~~~~~----~~~~l~~~i~~~l~~~p~  233 (250)
T cd05123         170 YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKI-----------LK-DPLRFPEF----LSPEARDLISGLLQKDPT  233 (250)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-----------hc-CCCCCCCC----CCHHHHHHHHHHhcCCHh
Confidence            456899999999999999999998655432221111           00 01111111    134567999999999999


Q ss_pred             CCCCH---HHHHHHHHH
Q 039745           83 ERPSV---EDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~---~~~~~~~~~   96 (127)
                      .||++   .+++.|+||
T Consensus       234 ~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         234 KRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hCCCcccHHHHHhCCCC
Confidence            99999   888887764

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.21  E-value=3.6e-11  Score=74.85  Aligned_cols=81  Identities=19%  Similarity=0.311  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSR-KEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+|++|++++++++|..|+.. ..........   ....         ...... .......+.+++.+||..+
T Consensus       162 ~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~---~~~~---------~~~~~~-~~~~~~~~~~~i~~~l~~~  228 (244)
T smart00220      162 GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKI---GKPK---------PPFPPP-EWKISPEAKDLIRKLLVKD  228 (244)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH---hccC---------CCCccc-cccCCHHHHHHHHHHccCC
Confidence            456799999999999999999999865 3322222111   1000         000000 0002346778999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++++.+
T Consensus       229 p~~Rp~~~~~~~~~~  243 (244)
T smart00220      229 PEKRLTAEEALQHPF  243 (244)
T ss_pred             chhccCHHHHhhCCC
Confidence            999999999998765

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=6e-12  Score=82.94  Aligned_cols=83  Identities=19%  Similarity=0.271  Sum_probs=55.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|+.||...........+.   ..    ......+... .    ....+.+|+.+|+. +|
T Consensus       206 ~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~---~~----~~~~~~p~~~-~----~~~~~~~li~~ll~-dp  272 (350)
T cd05573         206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKII---NW----KESLRFPPDP-P----VSPEAIDLICRLLC-DP  272 (350)
T ss_pred             CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHh---cc----CCcccCCCCC-C----CCHHHHHHHHHHcc-Ch
Confidence            36789999999999999999999996544322211110   00    0000011110 0    23456689999997 99


Q ss_pred             CCCCC-HHHHHHHHHHh
Q 039745           82 AERPS-VEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~-~~~~~~~~~~~   97 (127)
                      .+|++ +.+++.|+|+.
T Consensus       273 ~~R~~s~~~ll~hp~~~  289 (350)
T cd05573         273 EDRLGSFEEIKSHPFFK  289 (350)
T ss_pred             hhcCCCHHHHhcCCCcC
Confidence            99999 99999998864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.21  E-value=7.8e-11  Score=74.96  Aligned_cols=80  Identities=15%  Similarity=0.278  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+|++|++++|+++ |..||...........+   ..        .......    ......+.+++.+||..+
T Consensus       185 ~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~---~~--------~~~~~~~----~~~~~~~~~li~~~l~~~  249 (267)
T cd05066         185 KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI---EE--------GYRLPAP----MDCPAALHQLMLDCWQKD  249 (267)
T ss_pred             ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHH---hC--------CCcCCCC----CCCCHHHHHHHHHHcccC
Confidence            46778999999999999886 99998644332221111   00        0001111    112345679999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.+++..+..
T Consensus       250 p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         250 RNERPKFEQIVSILDK  265 (267)
T ss_pred             chhCCCHHHHHHHHHh
Confidence            9999999999887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.21  E-value=6.6e-11  Score=74.60  Aligned_cols=77  Identities=18%  Similarity=0.378  Sum_probs=52.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+|++|++++++++ |..|+...........+   ....        .....    ......+.+++.+||..+
T Consensus       180 ~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~---~~~~--------~~~~~----~~~~~~~~~~i~~~l~~~  244 (258)
T smart00219      180 KFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYL---KKGY--------RLPKP----ENCPPEIYKLMLQCWAED  244 (258)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---hcCC--------CCCCC----CcCCHHHHHHHHHHCcCC
Confidence            46789999999999999998 77887654432222111   1000        01111    113346778999999999


Q ss_pred             CCCCCCHHHHHHH
Q 039745           81 PAERPSVEDVLWN   93 (127)
Q Consensus        81 p~~Rp~~~~~~~~   93 (127)
                      |.+||++.+++..
T Consensus       245 p~~Rpt~~~ll~~  257 (258)
T smart00219      245 PEDRPTFSELVEI  257 (258)
T ss_pred             hhhCcCHHHHHhh
Confidence            9999999999764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.20  E-value=7.3e-12  Score=82.16  Aligned_cols=83  Identities=17%  Similarity=0.236  Sum_probs=53.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH------HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV------DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVR   75 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   75 (127)
                      .++.++|+||+|++++||++|+.||.....      ...........       .  .....+..    ....+.+++.+
T Consensus       172 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~-------~--~~~~~p~~----~~~~~~~ll~~  238 (329)
T cd05618         172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-------E--KQIRIPRS----LSVKAASVLKS  238 (329)
T ss_pred             CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh-------c--CCCCCCCC----CCHHHHHHHHH
Confidence            367799999999999999999999842110      00001110000       0  01111111    22356699999


Q ss_pred             hcccCCCCCCC------HHHHHHHHHHh
Q 039745           76 CLLKNPAERPS------VEDVLWNLQFA   97 (127)
Q Consensus        76 cl~~~p~~Rp~------~~~~~~~~~~~   97 (127)
                      ||..+|.+|++      +.+++.|+++.
T Consensus       239 ~L~~dP~~R~~~~~~~~~~~i~~hp~f~  266 (329)
T cd05618         239 FLNKDPKERLGCHPQTGFADIQGHPFFR  266 (329)
T ss_pred             HhcCCHHHcCCCCCCCCHHHHhcCCCCC
Confidence            99999999998      57999998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.20  E-value=1.6e-12  Score=84.77  Aligned_cols=78  Identities=17%  Similarity=0.264  Sum_probs=53.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++||++|+.||...........+   ..       .  ....+..    ....+.+++.+||..+|.
T Consensus       175 ~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i---~~-------~--~~~~p~~----~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         175 HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI---LK-------A--KLGMPQF----LSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH---Hc-------C--CCCCCCC----CCHHHHHHHHHHhhcCHh
Confidence            577899999999999999999999654432221111   00       0  0111111    123566899999999999


Q ss_pred             CCCC-----HHHHHHHHHH
Q 039745           83 ERPS-----VEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~-----~~~~~~~~~~   96 (127)
                      +|++     +.+++.|.|+
T Consensus       239 ~R~~a~~~~~~~~~~~~~~  257 (318)
T cd05582         239 NRLGAGPDGVEEIKRHPFF  257 (318)
T ss_pred             HcCCCCCCCHHHHhCCCCc
Confidence            9999     6778888765

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.20  E-value=3.4e-11  Score=77.52  Aligned_cols=94  Identities=18%  Similarity=0.275  Sum_probs=54.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH--HHHHHHHHHHHhhchHH----------HhhhcCCcCccc---cc--HHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVITADESA----------RRSMVDPAVNKA---CL--DES   65 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~---~~--~~~   65 (127)
                      ++.++|+||+|++++|+++|..||.....  ..+..............          ............   ..  ...
T Consensus       181 ~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (291)
T cd07870         181 YSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSR  260 (291)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCC
Confidence            56789999999999999999999864332  11111111111000000          000000000000   00  001


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ...+.+++.+|+..+|.+||++.+++.|.|+
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            2356789999999999999999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.20  E-value=5.1e-11  Score=79.45  Aligned_cols=84  Identities=15%  Similarity=0.160  Sum_probs=62.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+..+||||+|+++|.|++|.+||...........+.            ..+..+....+......+.+|+..++..+|
T Consensus       214 ~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~------------~~~~~f~~~~w~~is~~akd~i~~ll~~dp  281 (382)
T KOG0032|consen  214 PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAIL------------RGDFDFTSEPWDDISESAKDFIRKLLEFDP  281 (382)
T ss_pred             CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHH------------cCCCCCCCCCccccCHHHHHHHHHhcccCc
Confidence            58899999999999999999999996555333322210            011233344455556677899999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      ..|+++.++++|+|..
T Consensus       282 ~~R~ta~~~L~HpWi~  297 (382)
T KOG0032|consen  282 RKRLTAAQALQHPWIK  297 (382)
T ss_pred             ccCCCHHHHhcCcccc
Confidence            9999999999998843

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.19  E-value=4.6e-11  Score=79.79  Aligned_cols=81  Identities=22%  Similarity=0.327  Sum_probs=59.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.|+||||+||+++||++-+++|...+...+...+          .+....|.     +......+..++..|+..+|
T Consensus       182 pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki----------~~~~~~Pl-----p~~ys~el~~lv~~~l~~~P  246 (426)
T KOG0589|consen  182 PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKI----------NRGLYSPL-----PSMYSSELRSLVKSMLRKNP  246 (426)
T ss_pred             CCCccCcchhhcchHHHHHhcccccCccchHHHHHHH----------hhccCCCC-----CccccHHHHHHHHHHhhcCC
Confidence            4899999999999999999999999876655443222          11112221     22233466789999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      ..||++.+++.++...
T Consensus       247 ~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  247 EHRPSALELLRRPHLL  262 (426)
T ss_pred             ccCCCHHHHhhChhhh
Confidence            9999999999876544

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.19  E-value=6.4e-12  Score=82.07  Aligned_cols=79  Identities=15%  Similarity=0.271  Sum_probs=53.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|..||...........+   ..       .  .......    ....+.+++.+||+.+|
T Consensus       172 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~-------~--~~~~~~~----~~~~~~~li~~~l~~~p  235 (321)
T cd05603         172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNI---LH-------K--PLQLPGG----KTVAACDLLVGLLHKDQ  235 (321)
T ss_pred             CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHH---hc-------C--CCCCCCC----CCHHHHHHHHHHccCCH
Confidence            4678999999999999999999999655433322111   00       0  0111111    12356689999999999


Q ss_pred             CCCCCH----HHHHHHHHH
Q 039745           82 AERPSV----EDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~----~~~~~~~~~   96 (127)
                      .+|++.    .+++.|.++
T Consensus       236 ~~R~~~~~~~~~~~~~~~~  254 (321)
T cd05603         236 RRRLGAKADFLEIKNHVFF  254 (321)
T ss_pred             hhcCCCCCCHHHHhCCCCc
Confidence            999864    477777664

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.19  E-value=8.7e-11  Score=74.62  Aligned_cols=79  Identities=16%  Similarity=0.247  Sum_probs=52.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|+.||.......  .+....        .....+.    .+......+.+++.+|+. +|.
T Consensus       186 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~--------~~~~~~~----~~~~~~~~~~~~i~~~l~-~p~  250 (265)
T cd06652         186 YGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AIFKIA--------TQPTNPV----LPPHVSDHCRDFLKRIFV-EAK  250 (265)
T ss_pred             CCcchhHHHHHHHHHHHhhCCCCCCccchHH--HHHHHh--------cCCCCCC----CchhhCHHHHHHHHHHhc-Chh
Confidence            5678999999999999999999985432211  111000        0001111    122333456688889985 899


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      .||++++++.|.+.
T Consensus       251 ~Rp~~~~il~~~~~  264 (265)
T cd06652         251 LRPSADELLRHTFV  264 (265)
T ss_pred             hCCCHHHHhcCccc
Confidence            99999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.19  E-value=6e-11  Score=82.55  Aligned_cols=83  Identities=22%  Similarity=0.348  Sum_probs=59.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||||+.+.||..+.+|...-+..  .-++..         ....+|-+..  +..-...+.+|+.+||.++|
T Consensus       211 PYDykaDiWSlGITLIEMAqiEPPHhelnpM--RVllKi---------aKSePPTLlq--PS~Ws~~F~DfLk~cL~Knp  277 (1187)
T KOG0579|consen  211 PYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKI---------AKSEPPTLLQ--PSHWSRSFSDFLKRCLVKNP  277 (1187)
T ss_pred             CchhhhhHHhhhhHHHHHhccCCCccccchH--HHHHHH---------hhcCCCcccC--cchhhhHHHHHHHHHHhcCC
Confidence            4889999999999999999999997644432  223321         1122222221  11222356799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      ..||++.++++|+|+.
T Consensus       278 ~~Rp~aaqll~Hpfv~  293 (1187)
T KOG0579|consen  278 RNRPPAAQLLKHPFVQ  293 (1187)
T ss_pred             ccCCCHHHHhhCcccc
Confidence            9999999999999976

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.19  E-value=2.8e-12  Score=84.01  Aligned_cols=83  Identities=16%  Similarity=0.190  Sum_probs=55.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|+.||........ ..+.    .     .....  ..+.  .......+.+|+..||. +
T Consensus       185 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~----~-----~~~~~--~~~~--~~~~~~~~~~li~~ll~-~  250 (330)
T cd05601         185 TYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIM----N-----FQRFL--KFPE--DPKVSSDFLDLIQSLLC-G  250 (330)
T ss_pred             CCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHH----c-----CCCcc--CCCC--CCCCCHHHHHHHHHHcc-C
Confidence            367889999999999999999999965433221 1111    0     00000  0000  01122356688899997 9


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+|+++.+++.|.|+..
T Consensus       251 p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         251 QKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             hhhCCCHHHHhCCCCcCC
Confidence            999999999999998653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.18  E-value=3.1e-11  Score=84.28  Aligned_cols=96  Identities=23%  Similarity=0.208  Sum_probs=54.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCccc------ccHHHHHHHHHHHHHh
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA------CLDESLKTMMEVCVRC   76 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~c   76 (127)
                      ++.++||||+||+++||+.+..+..... ......+........ .......+.....      .........++|+.+|
T Consensus       356 ~~~k~DVwSlGviL~el~~~~~~~~~~~-~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m  433 (566)
T PLN03225        356 LPDRFDIYSAGLIFLQMAFPNLRSDSNL-IQFNRQLKRNDYDLV-AWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM  433 (566)
T ss_pred             CCCCcccHHHHHHHHHHHhCcCCCchHH-HHHHHHHHhcCCcHH-HHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence            4557799999999999998765543221 112222111110000 1111111111100      0001122355899999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhhc
Q 039745           77 LLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        77 l~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |..||.+||++.++++|+|+....
T Consensus       434 L~~dP~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        434 MRFKGRQRISAKAALAHPYFDREG  457 (566)
T ss_pred             ccCCcccCCCHHHHhCCcCcCCCC
Confidence            999999999999999999986543

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.18  E-value=1.4e-10  Score=73.89  Aligned_cols=80  Identities=20%  Similarity=0.318  Sum_probs=49.0

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      ++.++||||+|++++|+++ |..||..... ..+.....   ..    ......+....    .......+++..|| .+
T Consensus       186 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~----~~~~~~~~~~~~~~-~d  253 (269)
T cd05042         186 QTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVR---EQ----DIKLPKPQLDL----KYSDRWYEVMQFCW-LD  253 (269)
T ss_pred             cchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhh---cc----CccCCCCcccc----cCCHHHHHHHHHHh-cC
Confidence            5678999999999999999 7777754332 21111110   00    00111121111    12234457888888 59


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||+++++++.+
T Consensus       254 p~~Rpt~~~v~~~l  267 (269)
T cd05042         254 PETRPTAEEVHELL  267 (269)
T ss_pred             cccccCHHHHHHHh
Confidence            99999999998765

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.18  E-value=4.6e-11  Score=86.40  Aligned_cols=80  Identities=18%  Similarity=0.315  Sum_probs=53.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|||||||++|||++|..|+..... ....+.           ....++...     ........++.+||..+|
T Consensus       191 ~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~-----~~~~~~~~~~~~~L~~~P  253 (793)
T PLN00181        191 SSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSSLR-----------HRVLPPQIL-----LNWPKEASFCLWLLHPEP  253 (793)
T ss_pred             CCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHHHH-----------HhhcChhhh-----hcCHHHHHHHHHhCCCCh
Confidence            578899999999999999998877542211 111110           001111110     111234578889999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|+++..
T Consensus       254 ~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        254 SCRPSMSELLQSEFINE  270 (793)
T ss_pred             hhCcChHHHhhchhhhh
Confidence            99999999999998754

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.18  E-value=8.4e-11  Score=72.70  Aligned_cols=79  Identities=19%  Similarity=0.309  Sum_probs=58.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++..+|+|++|++++|++.|.+||.....+.....+..         -....|       ......+.+++.+|+..+|.
T Consensus       199 hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k---------~~~~~p-------~~is~~a~dlI~~ll~~~p~  262 (281)
T KOG0580|consen  199 HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK---------VDLKFP-------STISGGAADLISRLLVKNPI  262 (281)
T ss_pred             ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH---------ccccCC-------cccChhHHHHHHHHhccCcc
Confidence            67899999999999999999999975554444333311         011112       22234566999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +|....+++.|+|..
T Consensus       263 ~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  263 ERLALTEVMDHPWIV  277 (281)
T ss_pred             ccccHHHHhhhHHHH
Confidence            999999999999854

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.18  E-value=3.9e-11  Score=77.27  Aligned_cols=80  Identities=14%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|+++++|++|..||...........+.   .         ........    ....+.+++.+||..+|.
T Consensus       175 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~---------~~~~~~~~----~~~~l~~li~~~l~~~p~  238 (290)
T cd05580         175 YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL---E---------GKVRFPSF----FSPDAKDLIRNLLQVDLT  238 (290)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---c---------CCccCCcc----CCHHHHHHHHHHccCCHH
Confidence            4578999999999999999999986544322211110   0         00111111    134566899999999999


Q ss_pred             CCC-----CHHHHHHHHHHhh
Q 039745           83 ERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp-----~~~~~~~~~~~~~   98 (127)
                      +|+     ++.+++.|.++..
T Consensus       239 ~R~~~~~~~~~~l~~~~~~~~  259 (290)
T cd05580         239 KRLGNLKNGVNDIKNHPWFAG  259 (290)
T ss_pred             HccCcccCCHHHHHcCccccc
Confidence            999     8999999988633

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.18  E-value=7.9e-12  Score=81.78  Aligned_cols=79  Identities=13%  Similarity=0.251  Sum_probs=52.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|..||...........+   ...     .    .....    .....+.+++.+||+.+|
T Consensus       172 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~~-----~----~~~~~----~~~~~~~~li~~~l~~~p  235 (325)
T cd05602         172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI---LNK-----P----LQLKP----NITNSARHLLEGLLQKDR  235 (325)
T ss_pred             CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHH---HhC-----C----cCCCC----CCCHHHHHHHHHHcccCH
Confidence            4678999999999999999999999654433221111   000     0    01111    122356689999999999


Q ss_pred             CCCCCHH----HHHHHHHH
Q 039745           82 AERPSVE----DVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~----~~~~~~~~   96 (127)
                      .+|+++.    ++++|+++
T Consensus       236 ~~R~~~~~~~~~i~~~~~~  254 (325)
T cd05602         236 TKRLGAKDDFMEIKNHIFF  254 (325)
T ss_pred             HHCCCCCCCHHHHhcCccc
Confidence            9999865    67777665

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.17  E-value=2.1e-11  Score=77.69  Aligned_cols=88  Identities=15%  Similarity=0.209  Sum_probs=65.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH----HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL----LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      +|++..|+||+|+++|.+++|.+||-......    +...+            ....=.++.+.+....+...+++.++|
T Consensus       239 KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI------------~~gqy~FP~pEWs~VSe~aKdlIR~LL  306 (400)
T KOG0604|consen  239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRI------------RTGQYEFPEPEWSCVSEAAKDLIRKLL  306 (400)
T ss_pred             hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHh------------hccCccCCChhHhHHHHHHHHHHHHHh
Confidence            58999999999999999999999985433211    11111            011122344556777788889999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+|.+|.++.+++.|+|......
T Consensus       307 kt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  307 KTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             cCCchhheeHHHhhcCchhccccc
Confidence            999999999999999999665433

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.16  E-value=1.2e-10  Score=76.84  Aligned_cols=99  Identities=18%  Similarity=0.308  Sum_probs=59.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcC----------CcCc----ccccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVD----------PAVN----KACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~----~~~~~~~~~   67 (127)
                      ++.++|+|++|++++++++|..||..... .....+..............+..          +...    .........
T Consensus       193 ~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (343)
T cd07880         193 YTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANP  272 (343)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCCh
Confidence            56789999999999999999999864332 22222211110000000000000          0000    000111223


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+.+++.+|+..+|.+||++.+++.|.++.....
T Consensus       273 ~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         273 LAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence            5779999999999999999999999999866543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.16  E-value=2.1e-11  Score=79.91  Aligned_cols=83  Identities=17%  Similarity=0.213  Sum_probs=53.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH----HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      .++.++|+||+|++++||++|..||.....    ...........       .  .....+..    ....+.+++.+||
T Consensus       172 ~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-------~--~~~~~p~~----~~~~~~~li~~~L  238 (327)
T cd05617         172 EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL-------E--KPIRIPRF----LSVKASHVLKGFL  238 (327)
T ss_pred             CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH-------h--CCCCCCCC----CCHHHHHHHHHHh
Confidence            467899999999999999999999853211    00011110000       0  01111111    1234568999999


Q ss_pred             ccCCCCCCC------HHHHHHHHHHh
Q 039745           78 LKNPAERPS------VEDVLWNLQFA   97 (127)
Q Consensus        78 ~~~p~~Rp~------~~~~~~~~~~~   97 (127)
                      ..+|.+|++      +.+++.|.++.
T Consensus       239 ~~dP~~R~~~~~~~~~~~i~~h~~f~  264 (327)
T cd05617         239 NKDPKERLGCQPQTGFSDIKSHTFFR  264 (327)
T ss_pred             ccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence            999999987      56898888764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.15  E-value=6.2e-12  Score=82.26  Aligned_cols=80  Identities=15%  Similarity=0.233  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|..||...........+   ..       .  .......    ....+.+++.+|+..+|
T Consensus       172 ~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~---~~-------~--~~~~~~~----~~~~~~~ll~~ll~~~p  235 (325)
T cd05604         172 PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI---LH-------K--PLVLRPG----ASLTAWSILEELLEKDR  235 (325)
T ss_pred             CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH---Hc-------C--CccCCCC----CCHHHHHHHHHHhccCH
Confidence            4678999999999999999999998654433222111   00       0  0011111    12345689999999999


Q ss_pred             CCCCCH----HHHHHHHHHh
Q 039745           82 AERPSV----EDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~----~~~~~~~~~~   97 (127)
                      .+||++    .+++.|.|+.
T Consensus       236 ~~R~~~~~~~~~i~~h~~f~  255 (325)
T cd05604         236 QRRLGAKEDFLEIQEHPFFE  255 (325)
T ss_pred             HhcCCCCCCHHHHhcCCCcC
Confidence            999876    5788887764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.15  E-value=2.1e-10  Score=72.43  Aligned_cols=76  Identities=24%  Similarity=0.307  Sum_probs=50.3

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++|+++ |..|+.............   .         . .......    ...+.+++.+||..+
T Consensus       182 ~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~---------~-~~~~~~~----~~~~~~li~~~l~~~  244 (259)
T cd05037         182 SLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---D---------Q-HRLPMPD----CAELANLINQCWTYD  244 (259)
T ss_pred             CcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---c---------C-CCCCCCC----chHHHHHHHHHhccC
Confidence            46778999999999999999 566665433221111110   0         0 0000000    146679999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |.+||++.++++.+
T Consensus       245 p~~Rpt~~~il~~l  258 (259)
T cd05037         245 PTKRPSFRAILRDL  258 (259)
T ss_pred             hhhCCCHHHHHHhc
Confidence            99999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.15  E-value=3.9e-11  Score=80.15  Aligned_cols=84  Identities=14%  Similarity=0.231  Sum_probs=52.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHH-HHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHH--hcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLK-NQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVR--CLL   78 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--cl~   78 (127)
                      .|+.++||||+||+++||++|..||......... .+..         ...  ....+.  .......+.+|+.+  |+.
T Consensus       224 ~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~---------~~~--~~~~~~--~~~~s~~~~dli~~ll~~~  290 (381)
T cd05626         224 GYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN---------WEN--TLHIPP--QVKLSPEAVDLITKLCCSA  290 (381)
T ss_pred             CCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHc---------ccc--ccCCCC--CCCCCHHHHHHHHHHccCc
Confidence            3678999999999999999999999654432221 1110         000  000110  00112345577777  555


Q ss_pred             cCCCCCCCHHHHHHHHHHhh
Q 039745           79 KNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .++..|+++.+++.|.++..
T Consensus       291 ~~~~~R~~~~~~l~hp~f~~  310 (381)
T cd05626         291 EERLGRNGADDIKAHPFFSE  310 (381)
T ss_pred             ccccCCCCHHHHhcCcccCC
Confidence            66667999999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.15  E-value=9.3e-11  Score=79.83  Aligned_cols=76  Identities=20%  Similarity=0.361  Sum_probs=58.7

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.+||||+|+++|-+++|++||+..+ .+.+..+.               |-.  ...+.....++.+|+..+|..+|.+
T Consensus       198 PAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm---------------DCK--YtvPshvS~eCrdLI~sMLvRdPkk  260 (864)
T KOG4717|consen  198 PAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM---------------DCK--YTVPSHVSKECRDLIQSMLVRDPKK  260 (864)
T ss_pred             cchhhhHHHHHHHHHHhCCCccccccchhhhhhhh---------------ccc--ccCchhhhHHHHHHHHHHHhcCchh
Confidence            57999999999999999999997544 33333222               111  2234566778999999999999999


Q ss_pred             CCCHHHHHHHHHHh
Q 039745           84 RPSVEDVLWNLQFA   97 (127)
Q Consensus        84 Rp~~~~~~~~~~~~   97 (127)
                      |.+.+++..+.|..
T Consensus       261 RAslEeI~s~~Wlq  274 (864)
T KOG4717|consen  261 RASLEEIVSTSWLQ  274 (864)
T ss_pred             hccHHHHhcccccc
Confidence            99999999988843

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.14  E-value=4.5e-11  Score=77.44  Aligned_cols=82  Identities=15%  Similarity=0.368  Sum_probs=57.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      -|+..+|+||+|+++|||++|.+||...+.......+   ...     +    ....+..   -...+++++.++|..+|
T Consensus       201 gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I---~~~-----k----~~~~p~~---ls~~ardll~~LL~rdp  265 (357)
T KOG0598|consen  201 GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI---LKG-----K----LPLPPGY---LSEEARDLLKKLLKRDP  265 (357)
T ss_pred             CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH---hcC-----c----CCCCCcc---CCHHHHHHHHHHhccCH
Confidence            4889999999999999999999999766654433322   010     0    0111111   12355699999999999


Q ss_pred             CCCC----CHHHHHHHHHHhh
Q 039745           82 AERP----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp----~~~~~~~~~~~~~   98 (127)
                      .+|.    .+.++..|.+|..
T Consensus       266 ~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  266 RQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             HHhcCCCCChHHhhcCccccc
Confidence            9996    5888888887644

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.14  E-value=6.5e-11  Score=79.36  Aligned_cols=86  Identities=16%  Similarity=0.186  Sum_probs=62.3

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.+.|||++|+++|.++.|+.||.......+...+         .-..+..|..     .+......+|+.++|.+||..
T Consensus       297 g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI---------vn~pL~fP~~-----pe~~e~~kDli~~lL~KdP~~  362 (576)
T KOG0585|consen  297 GFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI---------VNDPLEFPEN-----PEINEDLKDLIKRLLEKDPEQ  362 (576)
T ss_pred             chhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH---------hcCcccCCCc-----ccccHHHHHHHHHHhhcChhh
Confidence            57899999999999999999999655544443332         1111122222     123446779999999999999


Q ss_pred             CCCHHHHHHHHHHhhhcccc
Q 039745           84 RPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      |.+..++..|+|........
T Consensus       363 Ri~l~~ik~Hpwvt~~g~~~  382 (576)
T KOG0585|consen  363 RITLPDIKLHPWVTRDGDSP  382 (576)
T ss_pred             eeehhhheecceeccCCCCC
Confidence            99999999999987764443

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.14  E-value=1.3e-10  Score=71.90  Aligned_cols=100  Identities=14%  Similarity=0.186  Sum_probs=67.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCC--CchhHHHHHHHHHHHHhhch----HHHhhhcCCcCcc----------------c
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLK--SRKEVDLLKNQLQAVITADE----SARRSMVDPAVNK----------------A   60 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------------~   60 (127)
                      |+.+-|+|||||++.+|+-.+.||  +..+.+++-.+...++...-    ..+.-.++|....                .
T Consensus       210 YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~  289 (338)
T KOG0668|consen  210 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSE  289 (338)
T ss_pred             ccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcc
Confidence            678899999999999999998887  45566777666554433211    0111122322211                0


Q ss_pred             ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 039745           61 CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        61 ~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      ...-...+..+|+.++|..|-++|+|+.+++.|++|..-...
T Consensus       290 n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~  331 (338)
T KOG0668|consen  290 NQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA  331 (338)
T ss_pred             ccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence            001112467799999999999999999999999998765543

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=7.4e-11  Score=74.23  Aligned_cols=78  Identities=18%  Similarity=0.332  Sum_probs=52.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+|++|++++++++|..|+........  .....         ....+...    ......+.+++.+||..+|+
T Consensus       176 ~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~--~~~~~---------~~~~~~~~----~~~~~~~~~~i~~~l~~~p~  240 (254)
T cd06627         176 ASTASDIWSLGCTVIELLTGNPPYYDLNPMAA--LFRIV---------QDDHPPLP----EGISPELKDFLMQCFQKDPN  240 (254)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHh---------ccCCCCCC----CCCCHHHHHHHHHHHhCChh
Confidence            46789999999999999999999864332111  11000         00111111    11234567999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.+++.+.+
T Consensus       241 ~R~~~~~~l~~~~  253 (254)
T cd06627         241 LRPTAKQLLKHPW  253 (254)
T ss_pred             hCcCHHHHhcCCC
Confidence            9999999998764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.13  E-value=1.8e-10  Score=81.32  Aligned_cols=80  Identities=20%  Similarity=0.308  Sum_probs=59.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.|+|||++||+||-++.+..||+.. ....+...+             .+ |.     .......+.+|+..||+.+|
T Consensus       235 I~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y-------------~~-P~-----~p~ys~~l~~LI~~mL~~nP  295 (738)
T KOG1989|consen  235 IGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY-------------SF-PP-----FPNYSDRLKDLIRTMLQPNP  295 (738)
T ss_pred             CcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc-------------cC-CC-----CccHHHHHHHHHHHHhccCc
Confidence            678999999999999999999999754 322111111             00 11     12344577899999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||.+.+++.++..+...+
T Consensus       296 ~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  296 DERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             ccCCCHHHHHHHHHHHhcCC
Confidence            99999999999998877644

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.13  E-value=2e-11  Score=78.52  Aligned_cols=101  Identities=12%  Similarity=0.079  Sum_probs=68.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhc---CCcCcccccHHHHHHHHHHHHHhcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMV---DPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      .|+++.|.||+|+++|.|++|.+||.+.....+.+--......++..+-+.+   .=.++++.+........+++..++.
T Consensus       267 ~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlv  346 (463)
T KOG0607|consen  267 FYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLV  346 (463)
T ss_pred             cccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHh
Confidence            4899999999999999999999998543322111110000011111111111   1224556677777788899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhccc
Q 039745           79 KNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      .++.+|.++.++++|+|+....++
T Consensus       347 rda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  347 RDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             ccHHhhhhhhhccCCccccccchh
Confidence            999999999999999998776554

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.13  E-value=2.5e-10  Score=72.89  Aligned_cols=79  Identities=22%  Similarity=0.415  Sum_probs=51.3

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+||+|++++++++ |..||............   ...      . .......    .....+.+++.+||..+|
T Consensus       195 ~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~---~~~------~-~~~~~~~----~~~~~l~~~i~~~l~~~p  260 (275)
T cd05046         195 FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL---QAG------K-LELPVPE----GCPSRLYKLMTRCWAVNP  260 (275)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH---HcC------C-cCCCCCC----CCCHHHHHHHHHHcCCCc
Confidence            4567999999999999998 77787533322211111   000      0 0000111    122356799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.+++..+.
T Consensus       261 ~~Rp~~~~~l~~l~  274 (275)
T cd05046         261 KDRPSFSELVSALG  274 (275)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999988764

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.12  E-value=1.7e-10  Score=79.75  Aligned_cols=98  Identities=18%  Similarity=0.150  Sum_probs=55.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCC-CCch---hHHHHHHHHHHHHhhchH------HHhhhcC----CcCccccc-----
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPL-KSRK---EVDLLKNQLQAVITADES------ARRSMVD----PAVNKACL-----   62 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p-~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~-----   62 (127)
                      .|+.++||||+||+++||++|..+ +...   ...++..++.........      .+...+.    ........     
T Consensus       344 ~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~  423 (501)
T PHA03210        344 GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRN  423 (501)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHh
Confidence            467889999999999999998654 4321   122222222211100000      0000000    00000000     


Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           63 DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        63 ~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ......+.+++.+||..||.+||++.+++.|++|...
T Consensus       424 ~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        424 LGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             cCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            0012245678889999999999999999999997553

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.12  E-value=3e-10  Score=72.37  Aligned_cols=81  Identities=17%  Similarity=0.271  Sum_probs=50.0

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      ++.++||||+|++++||++ +..||...... ......   ..    ....+.++.......    ..+.+++..|| .+
T Consensus       185 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~----~~~~~l~~~c~-~~  252 (268)
T cd05086         185 QTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI---KD----QQVKLFKPQLELPYS----ERWYEVLQFCW-LS  252 (268)
T ss_pred             CCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---hh----cccccCCCccCCCCc----HHHHHHHHHHh-hC
Confidence            4568999999999999997 56677543322 111111   00    111222233322222    34567888999 67


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.++++.+.
T Consensus       253 P~~Rp~~~~i~~~l~  267 (268)
T cd05086         253 PEKRATAEEVHRLLT  267 (268)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999987663

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=3.9e-11  Score=79.61  Aligned_cols=83  Identities=14%  Similarity=0.211  Sum_probs=53.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||+++||++|..||...........+   ....    ...   ..+..  ......+.+|+.+|+. +|
T Consensus       215 ~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i---~~~~----~~~---~~~~~--~~~s~~~~~li~~ll~-~p  281 (364)
T cd05599         215 GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKI---INWK----ETL---QFPDE--VPLSPEAKDLIKRLCC-EA  281 (364)
T ss_pred             CCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHH---HcCC----Ccc---CCCCC--CCCCHHHHHHHHHHcc-CH
Confidence            3678999999999999999999999654432221111   0000    000   00000  0112355688889986 89


Q ss_pred             CCCCC---HHHHHHHHHHh
Q 039745           82 AERPS---VEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~---~~~~~~~~~~~   97 (127)
                      .+|++   +.+++.|.|+.
T Consensus       282 ~~R~~~~~~~~ll~h~~~~  300 (364)
T cd05599         282 ERRLGNNGVNEIKSHPFFK  300 (364)
T ss_pred             hhcCCCCCHHHHhcCCCcC
Confidence            99987   99999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=3.8e-12  Score=83.38  Aligned_cols=81  Identities=14%  Similarity=0.177  Sum_probs=55.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++||++|+.||...........+.   .         ........   .....+.+|+.+||..+|.
T Consensus       174 ~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~---~---------~~~~~~~~---~~~~~~~~li~~~L~~~P~  238 (330)
T cd05586         174 YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA---F---------GKVRFPKN---VLSDEGRQFVKGLLNRNPQ  238 (330)
T ss_pred             CCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH---c---------CCCCCCCc---cCCHHHHHHHHHHcCCCHH
Confidence            6788999999999999999999986554333222110   0         00111111   1123456899999999999


Q ss_pred             CCC----CHHHHHHHHHHhh
Q 039745           83 ERP----SVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp----~~~~~~~~~~~~~   98 (127)
                      +|+    ++.+++.|.|+..
T Consensus       239 ~R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         239 HRLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             HCCCCCCCHHHHhcCccccC
Confidence            998    6899999988743

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.12  E-value=2.5e-10  Score=71.51  Aligned_cols=101  Identities=17%  Similarity=0.200  Sum_probs=67.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcC---------CcCcc-cc--cHHHH--
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVD---------PAVNK-AC--LDESL--   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~--~~~~~--   66 (127)
                      .|+++.|||..||++.||+++.+.++.. ...++..+-.+.+...++..+.+..         +.+.. ..  ..+..  
T Consensus       205 ~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp  284 (376)
T KOG0669|consen  205 EYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKP  284 (376)
T ss_pred             ccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhccc
Confidence            4789999999999999999999888644 4444555554444444333222211         11111 00  01111  


Q ss_pred             ----HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 039745           67 ----KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        67 ----~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                          ....+|+..++..||.+|+.+.+++.|.+|..+..+
T Consensus       285 ~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  285 YVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             ccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence                157799999999999999999999999999876544

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.11  E-value=1.5e-10  Score=77.21  Aligned_cols=85  Identities=16%  Similarity=0.208  Sum_probs=53.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|..||...........+   ....    ..   .....  .......+.+++..|+..++
T Consensus       223 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i---~~~~----~~---~~~~~--~~~~s~~~~~li~~~L~~~~  290 (371)
T cd05622         223 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI---MNHK----NS---LTFPD--DNDISKEAKNLICAFLTDRE  290 (371)
T ss_pred             cCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHH---HcCC----Cc---ccCCC--cCCCCHHHHHHHHHHcCChh
Confidence            3778999999999999999999999755432221111   0000    00   00100  11123356688899998444


Q ss_pred             CC--CCCHHHHHHHHHHhh
Q 039745           82 AE--RPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~--Rp~~~~~~~~~~~~~   98 (127)
                      .+  |+++.++++|+|+..
T Consensus       291 ~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         291 VRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             hhcCCCCHHHHhcCcccCC
Confidence            33  789999999998744

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.10  E-value=1.7e-11  Score=89.90  Aligned_cols=80  Identities=16%  Similarity=0.253  Sum_probs=56.7

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      ...||||+|||+.||++|++||...+.+  ..+...++-+.+        |.++    .......++|+..||..||..|
T Consensus      1420 ~A~DiWslGCVVlEM~tGkrPW~~~dne--~aIMy~V~~gh~--------Pq~P----~~ls~~g~dFle~Cl~~dP~~R 1485 (1509)
T KOG4645|consen 1420 GAADIWSLGCVVLEMATGKRPWAELDNE--WAIMYHVAAGHK--------PQIP----ERLSSEGRDFLEHCLEQDPKMR 1485 (1509)
T ss_pred             cchhhhcccceEEEeecCCCchhhccch--hHHHhHHhccCC--------CCCc----hhhhHhHHHHHHHHHhcCchhh
Confidence            4689999999999999999999644322  122222222221        3333    2345577899999999999999


Q ss_pred             CCHHHHHHHHHHhh
Q 039745           85 PSVEDVLWNLQFAA   98 (127)
Q Consensus        85 p~~~~~~~~~~~~~   98 (127)
                      .++.++++|-+...
T Consensus      1486 w~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1486 WTASQLLEHAFGKS 1499 (1509)
T ss_pred             hHHHHHHHhhcccc
Confidence            99999999886443

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.10  E-value=2.4e-11  Score=76.23  Aligned_cols=73  Identities=19%  Similarity=0.262  Sum_probs=48.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++|+++|+.++......     .           ........+    ......+.+++.+||..+|.
T Consensus       159 ~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-----------~~~~~~~~~----~~~~~~~~~li~~~l~~dp~  218 (237)
T cd05576         159 ETEACDWWSLGAILFELLTGKTLVECHPSG-----I-----------NTHTTLNIP----EWVSEEARSLLQQLLQFNPT  218 (237)
T ss_pred             CCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-----------ccccccCCc----ccCCHHHHHHHHHHccCCHH
Confidence            567899999999999999998776422110     0           000000111    11223567899999999999


Q ss_pred             CCCCH-----HHHHHHHH
Q 039745           83 ERPSV-----EDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~-----~~~~~~~~   95 (127)
                      +|+++     .+++.|.|
T Consensus       219 ~R~~~~~~~~~~~~~h~~  236 (237)
T cd05576         219 ERLGAGVAGVEDIKSHPF  236 (237)
T ss_pred             HhcCCCccchHHHHcCCC
Confidence            99986     77777765

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.09  E-value=1.5e-10  Score=79.53  Aligned_cols=82  Identities=22%  Similarity=0.406  Sum_probs=59.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhh-chHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITA-DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .|+..+||||||+.++||+++.-||. ..+..+.+..+   ..+ ++.-+..+-+|            .+.+|+.+|+..
T Consensus       219 ~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV---~SGiKP~sl~kV~dP------------evr~fIekCl~~  283 (632)
T KOG0584|consen  219 NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV---TSGIKPAALSKVKDP------------EVREFIEKCLAT  283 (632)
T ss_pred             hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH---HcCCCHHHhhccCCH------------HHHHHHHHHhcC
Confidence            48899999999999999999999984 33434333332   222 11122222222            455899999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                       ...|+++.+++.+.+|...
T Consensus       284 -~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  284 -KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             -chhccCHHHHhhChhhccc
Confidence             9999999999999998765

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.08  E-value=3.5e-10  Score=72.68  Aligned_cols=101  Identities=16%  Similarity=0.217  Sum_probs=66.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch----------hHHHHHHHHHHHHhhchHHHhhhcCC------------cCcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK----------EVDLLKNQLQAVITADESARRSMVDP------------AVNK   59 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~   59 (127)
                      .|++.+|+|++||++.|+++-++.|...          ..+++..+...++.+.....+.+..-            .-..
T Consensus       216 hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~  295 (438)
T KOG0666|consen  216 HYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYD  295 (438)
T ss_pred             cccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcC
Confidence            4899999999999999999988777421          23556666665555433222211100            0000


Q ss_pred             cccH----H----HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 039745           60 ACLD----E----SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        60 ~~~~----~----~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      .+.-    +    ......+|+.++|.+||.+|.+++++++|.+|.....+
T Consensus       296 n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  296 NVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             cchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence            0000    0    01137799999999999999999999999999876443

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.07  E-value=4.9e-11  Score=80.84  Aligned_cols=87  Identities=21%  Similarity=0.362  Sum_probs=62.3

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHH-HHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQL-QAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      |.|+.++|||+||+++||+++ |..||......+....+ ......               ..+...+..+..++..||.
T Consensus       337 ~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~---------------~~~~~~p~~~~~~~~~c~~  401 (474)
T KOG0194|consen  337 GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM---------------PIPSKTPKELAKVMKQCWK  401 (474)
T ss_pred             CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC---------------CCCCCCHHHHHHHHHHhcc
Confidence            468999999999999999998 77798665554444333 111111               1112334456688889999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhccc
Q 039745           79 KNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      .+|.+|++|.++.+.+..+.....
T Consensus       402 ~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  402 KDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             CChhhccCHHHHHHHHHHHHhccc
Confidence            999999999999998887666544

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.07  E-value=6.7e-11  Score=79.27  Aligned_cols=95  Identities=16%  Similarity=0.242  Sum_probs=63.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      +++.++||||+|+++|..+.|++||+.....+.  ++.   ........++-.|.-     +.......+|+.+||.+.-
T Consensus       660 KIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd--ILq---eNTIlkAtEVqFP~K-----PvVsseAkaFIRRCLaYRK  729 (775)
T KOG1151|consen  660 KISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD--ILQ---ENTILKATEVQFPPK-----PVVSSEAKAFIRRCLAYRK  729 (775)
T ss_pred             ccccceeeEeeehhhhhhhccCCCCCCchhHHH--HHh---hhchhcceeccCCCC-----CccCHHHHHHHHHHHHhhh
Confidence            578899999999999999999999986553321  110   000001222222221     1122345689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhccccccc
Q 039745           82 AERPSVEDVLWNLQFAAQVQDAWHS  106 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~~~~~~  106 (127)
                      .+|....++..++.++.........
T Consensus       730 eDR~DV~qLA~dpyllPh~rrs~s~  754 (775)
T KOG1151|consen  730 EDRIDVQQLACDPYLLPHIRRSVST  754 (775)
T ss_pred             hhhhhHHHHccCccccchhhhcccc
Confidence            9999999999999887755544433

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.07  E-value=1.8e-10  Score=75.63  Aligned_cols=85  Identities=13%  Similarity=0.199  Sum_probs=52.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|+++|||++|+.||...........+   ....    .....+..    .......+.+|+.+|+..++
T Consensus       184 ~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i---~~~~----~~~~~p~~----~~~~s~~~~~li~~ll~~~~  252 (332)
T cd05623         184 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MNHK----ERFQFPAQ----VTDVSEDAKDLIRRLICSRE  252 (332)
T ss_pred             CCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHH---hCCC----ccccCCCc----cccCCHHHHHHHHHHccChh
Confidence            4678999999999999999999999654432221111   0000    00000111    11223456688888886544


Q ss_pred             C--CCCCHHHHHHHHHHh
Q 039745           82 A--ERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~--~Rp~~~~~~~~~~~~   97 (127)
                      .  .|+++.+++.|.|+.
T Consensus       253 ~r~~r~~~~~~~~h~~f~  270 (332)
T cd05623         253 HRLGQNGIEDFKQHPFFT  270 (332)
T ss_pred             hhcCCCCHHHHhCCCCcC
Confidence            4  468999999998864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.06  E-value=2.5e-10  Score=75.82  Aligned_cols=84  Identities=15%  Similarity=0.259  Sum_probs=49.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc--c
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL--K   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~--~   79 (127)
                      .|+.++||||+||+++||++|+.||...........+.   ...    .....+... ...    ....+++.+++.  .
T Consensus       212 ~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~---~~~----~~~~~p~~~-~~s----~~~~~li~~l~~~~~  279 (363)
T cd05628         212 GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVM---NWK----ETLIFPPEV-PIS----EKAKDLILRFCCEWE  279 (363)
T ss_pred             CCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH---cCc----CcccCCCcC-CCC----HHHHHHHHHHcCChh
Confidence            46789999999999999999999996544332221110   000    001011100 111    234466655333  3


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      ++..||++.++++|+|+.
T Consensus       280 ~r~~r~~~~ei~~hp~f~  297 (363)
T cd05628         280 HRIGAPGVEEIKTNPFFE  297 (363)
T ss_pred             hcCCCCCHHHHhCCCCCC
Confidence            445678999999998864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.06  E-value=2.4e-10  Score=73.50  Aligned_cols=81  Identities=14%  Similarity=0.234  Sum_probs=50.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+|++|++++||++|..||...... ....+....        .. ..+..+..    ....+.+++.+||..+|
T Consensus       185 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~----~~~~l~~li~~~l~~~p  251 (288)
T cd05583         185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI--------LK-SKPPFPKT----MSAEARDFIQKLLEKDP  251 (288)
T ss_pred             CcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH--------Hc-cCCCCCcc----cCHHHHHHHHHHhcCCH
Confidence            467899999999999999999998532111 111111100        00 01111111    22356789999999999


Q ss_pred             CCCCCHH---HHHHHHHH
Q 039745           82 AERPSVE---DVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~---~~~~~~~~   96 (127)
                      +.||++.   +++.|+++
T Consensus       252 ~~R~t~~~~~~~l~~~~~  269 (288)
T cd05583         252 KKRLGANGADEIKNHPFF  269 (288)
T ss_pred             hhccCcchHHHHhcCccc
Confidence            9999854   55777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=4.6e-10  Score=71.31  Aligned_cols=78  Identities=14%  Similarity=0.221  Sum_probs=51.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|++++++++|+.||......  ..+.....        ....+..+    ......+.+++..||. ++.
T Consensus       186 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~--------~~~~~~~p----~~~~~~~~~~i~~~l~-~~~  250 (264)
T cd06653         186 YGRKADVWSVACTVVEMLTEKPPWAEYEAM--AAIFKIAT--------QPTKPMLP----DGVSDACRDFLKQIFV-EEK  250 (264)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCccCHH--HHHHHHHc--------CCCCCCCC----cccCHHHHHHHHHHhc-Ccc
Confidence            567899999999999999999998643321  11111000        00111122    2233456799999999 579


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      .||++.+++.|++
T Consensus       251 ~r~~~~~~~~~~~  263 (264)
T cd06653         251 RRPTAEFLLRHPF  263 (264)
T ss_pred             cCccHHHHhcCCC
Confidence            9999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.05  E-value=1.5e-10  Score=77.18  Aligned_cols=84  Identities=15%  Similarity=0.148  Sum_probs=53.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+||+++||++|+.||...........+   ...       ......+.  .......+.+++..|+..++.
T Consensus       224 ~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i---~~~-------~~~~~~p~--~~~~s~~~~~li~~~L~~~~~  291 (370)
T cd05621         224 YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI---MDH-------KNSLNFPE--DVEISKHAKNLICAFLTDREV  291 (370)
T ss_pred             CCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHH---HhC-------CcccCCCC--cccCCHHHHHHHHHHccCchh
Confidence            678999999999999999999999654432221111   000       00001111  011223456888888875554


Q ss_pred             --CCCCHHHHHHHHHHhh
Q 039745           83 --ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 --~Rp~~~~~~~~~~~~~   98 (127)
                        .|+++.++++|+|+..
T Consensus       292 r~~R~~~~e~l~hp~~~~  309 (370)
T cd05621         292 RLGRNGVEEIKQHPFFKN  309 (370)
T ss_pred             ccCCCCHHHHhcCcccCC
Confidence              3889999999999754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.05  E-value=1.1e-09  Score=72.10  Aligned_cols=87  Identities=23%  Similarity=0.308  Sum_probs=59.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      ++|+.|+|+||+|+++|++++|+.||.......+...+......         -+.+.    ........+++...+..+
T Consensus       189 ~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~---------~~~~~----~~~s~~~~~Ll~~ll~~~  255 (429)
T KOG0595|consen  189 QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI---------VPVLP----AELSNPLRELLISLLQRN  255 (429)
T ss_pred             ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc---------cCchh----hhccCchhhhhhHHHhcC
Confidence            47999999999999999999999999876665555444211111         11111    111122347778888899


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      +.+|.++.+.+.|.......
T Consensus       256 ~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  256 PKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             ccccCchHHhhhhhhcccCc
Confidence            99998888887777654443

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.05  E-value=1e-10  Score=78.18  Aligned_cols=82  Identities=16%  Similarity=0.253  Sum_probs=51.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHH-HHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLK-NQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||+++||++|+.||......... .+...        ......+. ...    ......+++.+++ .+
T Consensus       224 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--------~~~~~~p~-~~~----~s~~~~~li~~l~-~~  289 (382)
T cd05625         224 GYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINW--------QTSLHIPP-QAK----LSPEASDLIIKLC-RG  289 (382)
T ss_pred             CCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHcc--------CCCcCCCC-ccc----CCHHHHHHHHHHc-cC
Confidence            4678999999999999999999999654432211 11100        00000010 011    1224456676765 58


Q ss_pred             CCCCCC---HHHHHHHHHHh
Q 039745           81 PAERPS---VEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~---~~~~~~~~~~~   97 (127)
                      |.+|++   +.+++.|.++.
T Consensus       290 p~~R~~~~~~~ei~~hp~f~  309 (382)
T cd05625         290 PEDRLGKNGADEIKAHPFFK  309 (382)
T ss_pred             HhHcCCCCCHHHHhcCCCcC
Confidence            999987   99999998864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.05  E-value=5.1e-11  Score=80.91  Aligned_cols=96  Identities=15%  Similarity=0.171  Sum_probs=62.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhh--cCCcC---------------------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSM--VDPAV---------------------   57 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~---------------------   57 (127)
                      .|+...|+||+||.+||+.+|+..|.+....++ ..+...-+..+...+..-  .+.++                     
T Consensus       611 ~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~  690 (752)
T KOG0670|consen  611 PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRT  690 (752)
T ss_pred             cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEE
Confidence            378899999999999999999999865443333 333322222222111110  00000                     


Q ss_pred             --------------------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           58 --------------------NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        58 --------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                                          ...........+.+|+.+|+..||++|.++.+++.|+++.
T Consensus       691 vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~  750 (752)
T KOG0670|consen  691 VMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFIT  750 (752)
T ss_pred             EecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCccc
Confidence                                1111234456789999999999999999999999999865

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.04  E-value=4.2e-11  Score=79.81  Aligned_cols=83  Identities=14%  Similarity=0.222  Sum_probs=52.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|+.||...........+.   ...    .....+. .    ......+.+++.+|+ .+|
T Consensus       220 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~---~~~----~~~~~~~-~----~~~s~~~~~li~~l~-~~p  286 (376)
T cd05598         220 GYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVI---NWE----TTLHIPS-Q----AKLSREASDLILRLC-CGA  286 (376)
T ss_pred             CCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHh---ccC----ccccCCC-C----CCCCHHHHHHHHHHh-cCH
Confidence            36778999999999999999999996544322211110   000    0000010 0    111224457777765 599


Q ss_pred             CCCC---CHHHHHHHHHHh
Q 039745           82 AERP---SVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp---~~~~~~~~~~~~   97 (127)
                      .+|+   ++.+++.|.|+.
T Consensus       287 ~~R~~~~t~~ell~h~~~~  305 (376)
T cd05598         287 EDRLGKNGADEIKAHPFFK  305 (376)
T ss_pred             hhcCCCCCHHHHhCCCCcC
Confidence            9999   899999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.04  E-value=2.5e-10  Score=73.43  Aligned_cols=85  Identities=14%  Similarity=0.286  Sum_probs=55.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++|+|++|++++++++|..|+..... .....+......         ..+...    ......+.+++.+||..+|
T Consensus       185 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~ll~~~l~~~p  251 (290)
T cd05613         185 HDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK---------SEPPYP----QEMSALAKDIIQRLLMKDP  251 (290)
T ss_pred             CCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc---------cCCCCC----ccCCHHHHHHHHHHhcCCH
Confidence            45689999999999999999999853211 111111110000         011111    1123356799999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhhhc
Q 039745           82 AERP-----SVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~~~  100 (127)
                      .+|+     ++.+++.|.++....
T Consensus       252 ~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         252 KKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHhcCCCCCCHHHHHcCcccccCC
Confidence            9997     789999998875543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=4.7e-10  Score=73.72  Aligned_cols=85  Identities=11%  Similarity=0.150  Sum_probs=51.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|+.||...........+   ....    .....+....    .....+.+++.+|+..++
T Consensus       184 ~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i---~~~~----~~~~~~~~~~----~~~~~~~~li~~ll~~~~  252 (331)
T cd05597         184 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MNHK----EHFQFPPDVT----DVSEEAKDLIRRLICSPE  252 (331)
T ss_pred             CCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHH---HcCC----CcccCCCccC----CCCHHHHHHHHHHccCcc
Confidence            3677899999999999999999999654432221111   0000    0000011111    122345677778775433


Q ss_pred             --CCCCCHHHHHHHHHHh
Q 039745           82 --AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 --~~Rp~~~~~~~~~~~~   97 (127)
                        ..|+++.+++.|.|+.
T Consensus       253 ~r~~r~~~~~~l~hp~~~  270 (331)
T cd05597         253 TRLGRNGLQDFKDHPFFE  270 (331)
T ss_pred             cccCCCCHHHHhcCCCCC
Confidence              4478999999999874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=1e-10  Score=77.99  Aligned_cols=82  Identities=13%  Similarity=0.176  Sum_probs=52.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||+++||++|..||........ ..+..+         ..  ....+..  ......+.+|+.+|+. +
T Consensus       224 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~---------~~--~~~~p~~--~~~s~~~~dli~~lL~-~  289 (377)
T cd05629         224 GYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINW---------RE--TLYFPDD--IHLSVEAEDLIRRLIT-N  289 (377)
T ss_pred             CCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHcc---------CC--ccCCCCC--CCCCHHHHHHHHHHhc-C
Confidence            367899999999999999999999965443222 111100         00  0001110  0112356688889997 6


Q ss_pred             CCCC---CCHHHHHHHHHHh
Q 039745           81 PAER---PSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~R---p~~~~~~~~~~~~   97 (127)
                      |.+|   +++.+++.|+|+.
T Consensus       290 ~~~r~~r~~~~~~l~hp~~~  309 (377)
T cd05629         290 AENRLGRGGAHEIKSHPFFR  309 (377)
T ss_pred             HhhcCCCCCHHHHhcCCCcC
Confidence            6654   6999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.99  E-value=3e-10  Score=72.29  Aligned_cols=81  Identities=15%  Similarity=0.214  Sum_probs=57.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |++.+|+|++|++.|||+.|.+||...........+.         ...+.-|+.       ....+.+|+.++|+.|-.
T Consensus       218 ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~---------~~~v~fP~~-------fs~~~kdLl~~LL~vD~t  281 (355)
T KOG0616|consen  218 YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKIL---------EGKVKFPSY-------FSSDAKDLLKKLLQVDLT  281 (355)
T ss_pred             CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHH---------hCcccCCcc-------cCHHHHHHHHHHHhhhhH
Confidence            7889999999999999999999997665544443331         111112222       223556899999999999


Q ss_pred             CCC-----CHHHHHHHHHHhhh
Q 039745           83 ERP-----SVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp-----~~~~~~~~~~~~~~   99 (127)
                      +|.     ...++..|.||..-
T Consensus       282 ~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  282 KRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             hhhcCcCCCccccccCcccccc
Confidence            993     46688999997644

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.98  E-value=2e-10  Score=73.66  Aligned_cols=81  Identities=22%  Similarity=0.312  Sum_probs=57.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.++||||+|+...||..|++||.......  .++         .++.-.+|.+..  +..-...+.+|+..||.++|.
T Consensus       206 Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMR--AIF---------MIPT~PPPTF~K--PE~WS~~F~DFi~~CLiK~PE  272 (502)
T KOG0574|consen  206 YDTKADIWSLGITAIEMAEGRPPYSDIHPMR--AIF---------MIPTKPPPTFKK--PEEWSSEFNDFIRSCLIKKPE  272 (502)
T ss_pred             cchhhhHhhhcchhhhhhcCCCCcccccccc--eeE---------eccCCCCCCCCC--hHhhhhHHHHHHHHHhcCCHH
Confidence            7789999999999999999999997555432  222         111111122211  122234677999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +|-++.++++|.+.
T Consensus       273 ~R~TA~~L~~H~Fi  286 (502)
T KOG0574|consen  273 ERKTALRLCEHTFI  286 (502)
T ss_pred             HHHHHHHHhhhhhh
Confidence            99999999999874

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.98  E-value=5.3e-10  Score=74.88  Aligned_cols=86  Identities=17%  Similarity=0.273  Sum_probs=59.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      ++|+.++|+|++||++|||+.|..||..........-+.......            ..+++........+|...+|.+|
T Consensus       361 e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~------------~~ey~~kFS~eakslc~~LL~Kd  428 (591)
T KOG0986|consen  361 EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED------------PEEYSDKFSEEAKSLCEGLLTKD  428 (591)
T ss_pred             CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc------------hhhcccccCHHHHHHHHHHHccC
Confidence            469999999999999999999999996544333321121111111            12233444556778999999999


Q ss_pred             CCCCCC-----HHHHHHHHHHhh
Q 039745           81 PAERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~-----~~~~~~~~~~~~   98 (127)
                      |.+|..     +.++.+|++|..
T Consensus       429 p~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  429 PEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             HHHhccCCCcCcchhhhCccccc
Confidence            999974     567888888654

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.98  E-value=1e-09  Score=70.52  Aligned_cols=95  Identities=20%  Similarity=0.313  Sum_probs=63.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhchHHHhhhc------------------CCcCccc---
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMV------------------DPAVNKA---   60 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~---   60 (127)
                      |...+||||+||++.||+.|+..|. ....++-..++...+......+..+.                  ...+++.   
T Consensus       194 ~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~  273 (369)
T KOG0665|consen  194 YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFP  273 (369)
T ss_pred             CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCccccc
Confidence            6788999999999999999998874 44455555555544443332111110                  0001110   


Q ss_pred             ----ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           61 ----CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        61 ----~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                          ...-......+++.++|..+|++|.++.++++|+++.
T Consensus       274 ~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  274 VVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             ccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                0111223567899999999999999999999999976

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.97  E-value=2.7e-09  Score=77.66  Aligned_cols=86  Identities=22%  Similarity=0.284  Sum_probs=52.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+||+++||++|+.||............            ....+..... ....+..+.+++.+||..+|
T Consensus       207 ~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~------------~i~~P~~~~p-~~~iP~~L~~LI~rcL~~DP  273 (932)
T PRK13184        207 PASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRD------------VILSPIEVAP-YREIPPFLSQIAMKALAVDP  273 (932)
T ss_pred             CCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhh------------hccChhhccc-cccCCHHHHHHHHHHccCCh
Confidence            3678899999999999999999998653322111000            0000100000 01122356689999999999


Q ss_pred             CCCCC-HHHHHHHHHHhhhc
Q 039745           82 AERPS-VEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~-~~~~~~~~~~~~~~  100 (127)
                      .+|++ ++++...+....+.
T Consensus       274 ~kR~ss~eeLl~~Le~~lq~  293 (932)
T PRK13184        274 AERYSSVQELKQDLEPHLQG  293 (932)
T ss_pred             hhCcCHHHHHHHHHHHHHhc
Confidence            99965 56666666555443

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.97  E-value=2.4e-10  Score=72.00  Aligned_cols=86  Identities=19%  Similarity=0.297  Sum_probs=57.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCc-ccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN-KACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      |+-++|+||+|++++|+++|..|+..-+. .+.++.......+         |.+. .....+....+..++..|+.++.
T Consensus       246 yDiRSDvWSLGITL~EvAtG~fPyr~w~s-vfeql~~Vv~gdp---------p~l~~~~~~~~~s~~~~~fintCl~Kd~  315 (361)
T KOG1006|consen  246 YDIRSDVWSLGITLYEVATGNFPYRKWDS-VFEQLCQVVIGDP---------PILLFDKECVHYSFSMVRFINTCLIKDR  315 (361)
T ss_pred             cchhhhhhhhcceEeeeecCCCCcchHHH-HHHHHHHHHcCCC---------CeecCcccccccCHHHHHHHHHHhhccc
Confidence            77899999999999999999999853221 2222222111111         1111 11112234467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||...+++.+.+...
T Consensus       316 ~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  316 SDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             ccCcchhhhhcCchhhh
Confidence            99999999999877544

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.93  E-value=7.8e-10  Score=72.66  Aligned_cols=85  Identities=11%  Similarity=0.169  Sum_probs=52.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|+++|||++|+.||...........+   ....       .....+. ........+.+++.+|+..++
T Consensus       184 ~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i---~~~~-------~~~~~p~-~~~~~~~~~~~li~~ll~~~~  252 (331)
T cd05624         184 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---MNHE-------ERFQFPS-HITDVSEEAKDLIQRLICSRE  252 (331)
T ss_pred             CCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHH---HcCC-------CcccCCC-ccccCCHHHHHHHHHHccCch
Confidence            4678899999999999999999999654432221111   0000       0000110 011123456788889888655


Q ss_pred             CC--CCCHHHHHHHHHHh
Q 039745           82 AE--RPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~--Rp~~~~~~~~~~~~   97 (127)
                      .+  |+++.+++.|.|+.
T Consensus       253 ~~~~~~~~~~~~~h~~f~  270 (331)
T cd05624         253 RRLGQNGIEDFKKHAFFE  270 (331)
T ss_pred             hhcCCCCHHHHhcCCCcC
Confidence            44  46899999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.92  E-value=2.4e-10  Score=75.80  Aligned_cols=84  Identities=15%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+||+++||++|+.||...........+.   ...    .....+.. ..    ....+.+++.+++ .+|
T Consensus       212 ~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~---~~~----~~~~~p~~-~~----~s~~~~~li~~l~-~~p  278 (360)
T cd05627         212 GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVM---NWK----ETLVFPPE-VP----ISEKAKDLILRFC-TDS  278 (360)
T ss_pred             CCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHH---cCC----CceecCCC-CC----CCHHHHHHHHHhc-cCh
Confidence            36789999999999999999999996544332211110   000    00000110 00    1224557777766 489


Q ss_pred             CCCC---CHHHHHHHHHHhh
Q 039745           82 AERP---SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp---~~~~~~~~~~~~~   98 (127)
                      .+|+   ++.+++.|+|+..
T Consensus       279 ~~R~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         279 ENRIGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             hhcCCCCCHHHHhcCCCCCC
Confidence            9887   4899999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.91  E-value=4.6e-09  Score=68.17  Aligned_cols=80  Identities=18%  Similarity=0.270  Sum_probs=57.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+..+|+|.+|+|+|||++|+.||...+.+.+-.++         ..   .+-+++....+    +...|+..+|.++|.
T Consensus       345 YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI---------l~---ed~kFPr~ls~----eAktLLsGLL~kdP~  408 (516)
T KOG0690|consen  345 YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI---------LM---EDLKFPRTLSP----EAKTLLSGLLKKDPK  408 (516)
T ss_pred             ccceeehhhhhHHHHHHHhccCcccccchhHHHHHH---------Hh---hhccCCccCCH----HHHHHHHHHhhcChH
Confidence            788999999999999999999999655555444333         11   22223222233    445888899999999


Q ss_pred             CCC-----CHHHHHHHHHHhh
Q 039745           83 ERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp-----~~~~~~~~~~~~~   98 (127)
                      +|.     .+.++++|.+|..
T Consensus       409 kRLGgGpdDakEi~~h~FF~~  429 (516)
T KOG0690|consen  409 KRLGGGPDDAKEIMRHRFFAS  429 (516)
T ss_pred             hhcCCCchhHHHHHhhhhhcc
Confidence            996     4788888888754

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.89  E-value=5.3e-09  Score=69.83  Aligned_cols=80  Identities=21%  Similarity=0.380  Sum_probs=56.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+|++|+++|||+.|.+||+..+...+-..+.         -..+.       ++.....+..++....+.+.|
T Consensus       526 PYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~---------ehnvs-------yPKslSkEAv~ickg~ltK~P  589 (683)
T KOG0696|consen  526 PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIM---------EHNVS-------YPKSLSKEAVAICKGLLTKHP  589 (683)
T ss_pred             ccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---------HccCc-------CcccccHHHHHHHHHHhhcCC
Confidence            37899999999999999999999998777665543331         11111       122334456688889999999


Q ss_pred             CCCCCH-----HHHHHHHHHh
Q 039745           82 AERPSV-----EDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~-----~~~~~~~~~~   97 (127)
                      .+|..+     .++-.|.+|.
T Consensus       590 ~kRLGcg~~ge~di~~H~FFR  610 (683)
T KOG0696|consen  590 GKRLGCGPEGERDIREHPFFR  610 (683)
T ss_pred             ccccCCCCccccchhhCcchh
Confidence            999743     4566676653

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.87  E-value=3.3e-09  Score=63.63  Aligned_cols=96  Identities=28%  Similarity=0.304  Sum_probs=66.7

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchh-HHHHHHHHHHHHhhchHHHhhhc---CCcCccc---------ccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKE-VDLLKNQLQAVITADESARRSMV---DPAVNKA---------CLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~   68 (127)
                      |+.+.|+||.||++.|+.. |++.|...+ .+++..+...++...+...+.+.   +=..-+.         ..+.....
T Consensus       179 y~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~  258 (292)
T KOG0662|consen  179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNST  258 (292)
T ss_pred             hccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcch
Confidence            7889999999999999987 666675443 46677777666655543333321   1111111         11223346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .++++++.+.-+|..|.+++.+++|++|..
T Consensus       259 grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  259 GRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             hHHHHHHHhccCcccccCHHHHhcCccccc
Confidence            889999999999999999999999998743

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.86  E-value=6.6e-09  Score=76.41  Aligned_cols=81  Identities=21%  Similarity=0.316  Sum_probs=50.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      +|+.|+|+||+|+|++||+..   |+.....  ...+.        .++...-|.. ..........-..++.+++..||
T Consensus       794 ~Yn~KiDmYSLGIVlFEM~yP---F~TsMER--a~iL~--------~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP  859 (1351)
T KOG1035|consen  794 KYNSKIDMYSLGIVLFEMLYP---FGTSMER--ASILT--------NLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDP  859 (1351)
T ss_pred             cccchhhhHHHHHHHHHHhcc---CCchHHH--HHHHH--------hcccCCCCCC-cccccccchHHHHHHHHHhcCCC
Confidence            699999999999999999975   4432211  11111        1121111111 11122223344588899999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+|||+.++++.-.+
T Consensus       860 ~kRPtA~eLL~s~ll  874 (1351)
T KOG1035|consen  860 SKRPTATELLNSELL  874 (1351)
T ss_pred             ccCCCHHHHhhccCC
Confidence            999999999986543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.80  E-value=4.5e-08  Score=66.90  Aligned_cols=86  Identities=19%  Similarity=0.247  Sum_probs=62.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++..+|.|++|++++|+++|.+||...+....+.++-.       .+..+..|+.       ..+...+++.++...+|.
T Consensus       596 HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk-------Gid~i~~Pr~-------I~k~a~~Lik~LCr~~P~  661 (732)
T KOG0614|consen  596 HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK-------GIDKIEFPRR-------ITKTATDLIKKLCRDNPT  661 (732)
T ss_pred             cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh-------hhhhhhcccc-------cchhHHHHHHHHHhcCcH
Confidence            35689999999999999999999987776655554411       2222222322       233556889999999999


Q ss_pred             CCCC-----HHHHHHHHHHhhhccc
Q 039745           83 ERPS-----VEDVLWNLQFAAQVQD  102 (127)
Q Consensus        83 ~Rp~-----~~~~~~~~~~~~~~~~  102 (127)
                      .|..     ..++.+|.||...-..
T Consensus       662 ERLG~~~~gI~DIkkH~Wf~gfdwe  686 (732)
T KOG0614|consen  662 ERLGYQKGGINDIKKHRWFEGFDWE  686 (732)
T ss_pred             hhhccccCChHHHHhhhhhhcCChh
Confidence            9974     8899999998765443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=8.2e-09  Score=65.64  Aligned_cols=95  Identities=19%  Similarity=0.299  Sum_probs=64.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhchHHHhhhc-------------CCcCcccc----cH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKS-RKEVDLLKNQLQAVITADESARRSMV-------------DPAVNKAC----LD   63 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~----~~   63 (127)
                      +|+..+||||+||++.|++.++..|+ .....++..++..++.+..+.++..+             .|.+...+    ..
T Consensus       234 hYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~  313 (449)
T KOG0664|consen  234 RYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPD  313 (449)
T ss_pred             hhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCc
Confidence            58899999999999999999888885 44566777777666654443322111             11111111    12


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           64 ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        64 ~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                      ........+...++..+|.+|.+..+++.|++.
T Consensus       314 ~~~heav~~~~~~l~~d~dkris~~~A~~~~~~  346 (449)
T KOG0664|consen  314 DKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL  346 (449)
T ss_pred             ccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence            333456678888899999999999999888764

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.70  E-value=2.6e-08  Score=68.90  Aligned_cols=88  Identities=17%  Similarity=0.168  Sum_probs=50.5

Q ss_pred             chhHHHHHHHHHHHHhCCC-CCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC-
Q 039745            6 KIDIYDFGLILLEIIVGRP-LKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP-   81 (127)
Q Consensus         6 ~~Diws~G~~~~e~~~g~~-p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p-   81 (127)
                      +.|+||+||++++|+++.. |+.....  ........    ... ..+........-..........++|+.++|..++ 
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~----~~~-~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~  486 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDN----DLN-RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQ  486 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccc----hHH-HHHhhcccCCCcccccccChHHHHHHHHHhccCCC
Confidence            4799999999999999865 5532111  00100000    000 0011110111111112234467799999999866 


Q ss_pred             --CCCCCHHHHHHHHHHhh
Q 039745           82 --AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 --~~Rp~~~~~~~~~~~~~   98 (127)
                        .+|+++.+++.|+||..
T Consensus       487 ~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        487 ANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             CcccCCCHHHHhCCCCcCC
Confidence              68999999999999854

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.70  E-value=3.2e-08  Score=63.00  Aligned_cols=78  Identities=13%  Similarity=0.181  Sum_probs=53.4

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      ..+|+|||.+++||+.+++.||..-....+...+..          +-+.+.++    +.....+..|+.-|+..||.+|
T Consensus       368 raadmwsfaillwel~trevpfadlspmecgmkial----------eglrv~ip----pgis~hm~klm~icmnedpgkr  433 (448)
T KOG0195|consen  368 RAADMWSFAILLWELNTREVPFADLSPMECGMKIAL----------EGLRVHIP----PGISRHMNKLMNICMNEDPGKR  433 (448)
T ss_pred             hhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh----------ccccccCC----CCccHHHHHHHHHHhcCCCCcC
Confidence            368999999999999999999965444333333311          11112222    2222356689999999999999


Q ss_pred             CCHHHHHHHHHH
Q 039745           85 PSVEDVLWNLQF   96 (127)
Q Consensus        85 p~~~~~~~~~~~   96 (127)
                      |.+..++..+..
T Consensus       434 pkfdmivpilek  445 (448)
T KOG0195|consen  434 PKFDMIVPILEK  445 (448)
T ss_pred             CCcceehhhHHH
Confidence            999988776653

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.60  E-value=1.3e-07  Score=63.23  Aligned_cols=77  Identities=18%  Similarity=0.314  Sum_probs=56.0

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +..+|.||+|+++|.++.|..||++.+...+-..+.....      .   .|.        .+.....|+..+|..+|.+
T Consensus       231 GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY------r---EP~--------~PSdA~gLIRwmLmVNP~R  293 (668)
T KOG0611|consen  231 GPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY------R---EPE--------TPSDASGLIRWMLMVNPER  293 (668)
T ss_pred             CCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc------c---CCC--------CCchHHHHHHHHHhcCccc
Confidence            3679999999999999999999988776655444321110      0   111        1123347888999999999


Q ss_pred             CCCHHHHHHHHHHh
Q 039745           84 RPSVEDVLWNLQFA   97 (127)
Q Consensus        84 Rp~~~~~~~~~~~~   97 (127)
                      |.|+.++..|-|..
T Consensus       294 RATieDiAsHWWvN  307 (668)
T KOG0611|consen  294 RATIEDIASHWWVN  307 (668)
T ss_pred             chhHHHHhhhheee
Confidence            99999999998853

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.58  E-value=1.4e-07  Score=69.40  Aligned_cols=88  Identities=14%  Similarity=0.180  Sum_probs=58.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      |.|+..+|+||+|+++|||+.|..||.....-..+..+..       .......|..     ........+|+.+++. +
T Consensus       256 g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~-------hk~~l~FP~~-----~~VSeeakdLI~~ll~-~  322 (1317)
T KOG0612|consen  256 GEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMN-------HKESLSFPDE-----TDVSEEAKDLIEALLC-D  322 (1317)
T ss_pred             cccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhc-------hhhhcCCCcc-----cccCHHHHHHHHHHhc-C
Confidence            6799999999999999999999999965443322222211       1111122211     1234456688888754 6


Q ss_pred             CCCCCC---HHHHHHHHHHhhhcc
Q 039745           81 PAERPS---VEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~---~~~~~~~~~~~~~~~  101 (127)
                      |..|..   +.++..|+||...-+
T Consensus       323 ~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  323 REVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             hhhhcccccHHHHHhCccccCCCh
Confidence            667766   999999999866544

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.49  E-value=5.5e-08  Score=64.43  Aligned_cols=97  Identities=21%  Similarity=0.284  Sum_probs=59.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCC--chhHHHHHHHHHHHHhhchHHHh-------------------------hh---
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKS--RKEVDLLKNQLQAVITADESARR-------------------------SM---   52 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~--~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~---   52 (127)
                      -+.++||||.|++++.+++++.||.  ..+...+..+....+........                         .+   
T Consensus       255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~  334 (418)
T KOG1167|consen  255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE  334 (418)
T ss_pred             cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence            3568999999999999999999974  33333333333322221110000                         00   


Q ss_pred             -cCC--c--CcccccHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           53 -VDP--A--VNKACLDE-SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        53 -~~~--~--~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                       +..  .  .......+ ....+.+|+.+|+..+|.+|.++++++.|++|...
T Consensus       335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             hcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence             000  0  00000111 12368899999999999999999999999998643

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.48  E-value=1.7e-07  Score=62.89  Aligned_cols=96  Identities=25%  Similarity=0.315  Sum_probs=56.5

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHH-HhhchHHHhhhc-----CCcCcccc-cHHHHHHHHHHHHHhc
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV-ITADESARRSMV-----DPAVNKAC-LDESLKTMMEVCVRCL   77 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~l~~~cl   77 (127)
                      +.+||||||.|+||++.+..--+.....++. ++... ..+..+.+..++     .|.+++.. ..+....+.++|..||
T Consensus       405 k~ADIYafgLVlWEiarRc~~ggi~eey~~P-yyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW  483 (513)
T KOG2052|consen  405 KRADIYAFGLVLWEIARRCESGGIVEEYQLP-YYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECW  483 (513)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCEehhhcCC-cccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhh
Confidence            3689999999999998743211110100000 00000 001111222222     22232222 3456778899999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+|+.|.++-.+.+.+..+...+
T Consensus       484 ~~Np~aRltALriKKtl~~l~~~~  507 (513)
T KOG2052|consen  484 YANPAARLTALRIKKTLAKLSNSD  507 (513)
T ss_pred             cCCchhhhHHHHHHHHHHHHhcCh
Confidence            999999999999999888776544

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.46  E-value=7.5e-08  Score=69.02  Aligned_cols=82  Identities=18%  Similarity=0.278  Sum_probs=59.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+..+|+||+|++..||..|.+|+........  ++         .++.  +|...-.-+..=.+.+.+|+..||.++..
T Consensus       205 yd~R~D~WsLGITaIEladG~PPl~DmHPmra--LF---------~IpR--NPPPkLkrp~kWs~~FndFIs~cL~Kd~e  271 (953)
T KOG0587|consen  205 YDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--LF---------LIPR--NPPPKLKRPKKWSKKFNDFISTCLVKDYE  271 (953)
T ss_pred             cccccchhhccceeehhcCCCCCccCcchhhh--hc---------cCCC--CCCccccchhhHHHHHHHHHHHHHhhccc
Confidence            67899999999999999999999865554321  11         0011  12222222344456788999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +||++.+++.|++..
T Consensus       272 ~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  272 QRPSTEELLKHPFIT  286 (953)
T ss_pred             cCcchhhhccCCccc
Confidence            999999999998755

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.44  E-value=1.9e-08  Score=71.60  Aligned_cols=80  Identities=21%  Similarity=0.279  Sum_probs=52.3

Q ss_pred             CCchhHHHHHHHHHHHHhC-CCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            4 EDKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      +..+||+|+||++|.+++| ..||+.....+ .+++.   ..     ..+..-...    .++  ...+|+.+++..+|.
T Consensus       692 ~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl~---~~-----~~L~~L~~~----~d~--eA~dLI~~ml~~dP~  756 (903)
T KOG1027|consen  692 TQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANILT---GN-----YTLVHLEPL----PDC--EAKDLISRMLNPDPQ  756 (903)
T ss_pred             CcccchhhcCceEEEEecCCccCCCchHHhh-hhhhc---Cc-----cceeeeccC----chH--HHHHHHHHhcCCCcc
Confidence            3578999999999988885 77886443222 22221   00     000000000    111  566999999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      .||++.+|+.|+.|..
T Consensus       757 ~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  757 LRPSATDVLNHPLFWD  772 (903)
T ss_pred             cCCCHHHHhCCCccCC
Confidence            9999999999987644

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=4.8e-07  Score=59.33  Aligned_cols=83  Identities=17%  Similarity=0.273  Sum_probs=50.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCc---hh--HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHh
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSR---KE--VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRC   76 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   76 (127)
                      .|+.++|+|++|++++||+.|+.||+-   .+  ......+.+.... .+        -+++...+.    +...++...
T Consensus       427 eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile-kq--------iriprslsv----kas~vlkgf  493 (593)
T KOG0695|consen  427 EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE-KQ--------IRIPRSLSV----KASHVLKGF  493 (593)
T ss_pred             ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh-hc--------ccccceeeh----hhHHHHHHh
Confidence            378899999999999999999999852   11  1111111211111 00        111111112    334778899


Q ss_pred             cccCCCCCCC------HHHHHHHHHHh
Q 039745           77 LLKNPAERPS------VEDVLWNLQFA   97 (127)
Q Consensus        77 l~~~p~~Rp~------~~~~~~~~~~~   97 (127)
                      |.+||..|..      +.++..|.+|.
T Consensus       494 lnkdp~erlgc~~~~g~~dik~h~ffr  520 (593)
T KOG0695|consen  494 LNKDPKERLGCRPQTGFSDIKSHAFFR  520 (593)
T ss_pred             hcCCcHHhcCCCcccchhhhhcchhhh
Confidence            9999998863      56777777664

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.37  E-value=1e-06  Score=65.21  Aligned_cols=75  Identities=24%  Similarity=0.387  Sum_probs=50.3

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHH-HhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAV-ITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .+++-||||+||+++|+++ |+++|.-   +++-.+- .. .......++++.+..            .++++..+++.+
T Consensus       215 L~paMDIFS~GCViaELf~Eg~PlF~L---SQL~aYr-~~~~~~~e~~Le~Ied~~------------~Rnlil~Mi~rd  278 (1431)
T KOG1240|consen  215 LTPAMDIFSAGCVIAELFLEGRPLFTL---SQLLAYR-SGNADDPEQLLEKIEDVS------------LRNLILSMIQRD  278 (1431)
T ss_pred             cChhhhhhhhhHHHHHHHhcCCCcccH---HHHHhHh-ccCccCHHHHHHhCcCcc------------HHHHHHHHHccC
Confidence            5678999999999999988 6777752   2221111 00 011112333444443            348999999999


Q ss_pred             CCCCCCHHHHHHH
Q 039745           81 PAERPSVEDVLWN   93 (127)
Q Consensus        81 p~~Rp~~~~~~~~   93 (127)
                      |.+|.++.+.++.
T Consensus       279 Ps~RlSAedyL~~  291 (1431)
T KOG1240|consen  279 PSKRLSAEDYLQK  291 (1431)
T ss_pred             chhccCHHHHHHh
Confidence            9999999999876

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.37  E-value=8.2e-08  Score=66.28  Aligned_cols=83  Identities=12%  Similarity=0.204  Sum_probs=59.0

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +..+|+|++|+++|.++.|..||+......+....              +.....  .+--....+.+++++++..+|.+
T Consensus       233 gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv--------------l~gk~r--Ip~~ms~dce~lLrk~lvl~Psk  296 (596)
T KOG0586|consen  233 GPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV--------------LRGKYR--IPFYMSCDCEDLLRKFLVLNPSK  296 (596)
T ss_pred             CcceehhhhhhhheeeeecccccCCcccccccchh--------------eeeeec--ccceeechhHHHHHHhhccCccc
Confidence            46899999999999999999999866544332211              000000  01111235669999999999999


Q ss_pred             CCCHHHHHHHHHHhhhccc
Q 039745           84 RPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~~  102 (127)
                      |.++++++.|-|.......
T Consensus       297 r~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  297 RGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             cCCHHHhhhhcccchhhhh
Confidence            9999999999987665554

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.25  E-value=2e-06  Score=52.17  Aligned_cols=46  Identities=33%  Similarity=0.633  Sum_probs=38.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.+.|+|++|++++++                                               ..+.+++..|+..+|
T Consensus       170 ~~~~~~D~~~lg~~~~~l-----------------------------------------------~~~~~~l~~~l~~~p  202 (215)
T cd00180         170 YYSEKSDIWSLGVILYEL-----------------------------------------------PELKDLIRKMLQKDP  202 (215)
T ss_pred             CCCchhhhHHHHHHHHHH-----------------------------------------------HHHHHHHHHHhhCCc
Confidence            356789999999999998                                               133488889999999


Q ss_pred             CCCCCHHHHHHHH
Q 039745           82 AERPSVEDVLWNL   94 (127)
Q Consensus        82 ~~Rp~~~~~~~~~   94 (127)
                      .+||++.++++++
T Consensus       203 ~~R~~~~~l~~~~  215 (215)
T cd00180         203 EKRPSAKEILEHL  215 (215)
T ss_pred             ccCcCHHHHhhCC
Confidence            9999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.24  E-value=1.7e-06  Score=59.44  Aligned_cols=90  Identities=23%  Similarity=0.332  Sum_probs=55.8

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .+.+.|+||||++++|++.+..||+....... ..++..+..    .......|......  ........++..||..+|
T Consensus       135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P  208 (484)
T KOG1023|consen  135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIP  208 (484)
T ss_pred             ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh----cCCCCcCcchhhhh--hcchHHHHHHHHhcccCh
Confidence            46789999999999999999999864221111 122211111    01111222221111  223357799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      ..||++.++-..+....
T Consensus       209 ~~rPs~~~i~~~~~~~~  225 (484)
T KOG1023|consen  209 EKRPSIEQIRSKLLTIN  225 (484)
T ss_pred             hhCccHHHHHhhhhhhc
Confidence            99999999877665433

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.24  E-value=5.5e-06  Score=56.29  Aligned_cols=99  Identities=15%  Similarity=0.152  Sum_probs=58.9

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCC--chhHHHHHHHHHHHHhhchHHHhhh-----cCCcCccccc-HHHHHHHHHHHHHh
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKS--RKEVDLLKNQLQAVITADESARRSM-----VDPAVNKACL-DESLKTMMEVCVRC   76 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~l~~~c   76 (127)
                      ++.||||+|.|+|||+++...+.  .....++.--......+.-+.++.+     ..|.++.... ......+.+.+..|
T Consensus       403 kr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeC  482 (534)
T KOG3653|consen  403 KRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEEC  482 (534)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHH
Confidence            36899999999999999765542  2111111111111111111222222     2233332211 13345677888899


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhhcccc
Q 039745           77 LLKNPAERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        77 l~~~p~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      |..|+..|.|+.=+.+.++.+......
T Consensus       483 WDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  483 WDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             cCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            999999999999998888877766654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.89  E-value=7.3e-06  Score=53.01  Aligned_cols=62  Identities=16%  Similarity=0.182  Sum_probs=40.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.+.|.|++|+++|.++++..||+.........                   .....|. +.+..+..|+..+|+.+|.
T Consensus       227 ~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~-------------------~~f~~C~-~~Pe~v~~LI~~lL~~~~~  286 (288)
T PF14531_consen  227 YTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE-------------------WDFSRCR-DMPEPVQFLIRGLLQRNPE  286 (288)
T ss_dssp             E-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG-------------------GGGTTSS----HHHHHHHHHHT-SSGG
T ss_pred             eeeccCHHHHHHHHHHHHHccCCCCCCCcccccc-------------------ccchhcC-CcCHHHHHHHHHHccCCcc
Confidence            5678899999999999999999997543221110                   0122344 5566778999999999998


Q ss_pred             CC
Q 039745           83 ER   84 (127)
Q Consensus        83 ~R   84 (127)
                      +|
T Consensus       287 ~R  288 (288)
T PF14531_consen  287 DR  288 (288)
T ss_dssp             GS
T ss_pred             cC
Confidence            87

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.82  E-value=7e-06  Score=58.03  Aligned_cols=87  Identities=18%  Similarity=0.236  Sum_probs=56.5

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCC-CCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      |-|+.++|+|++|+...|+..=.+| |+......+..+..+...          .|.+.+  ...-...+.+|++.++.+
T Consensus       190 ggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~q----------pp~lkD--k~kws~~fh~fvK~altk  257 (829)
T KOG0576|consen  190 GGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQ----------PPTLKD--KTKWSEFFHNFVKGALTK  257 (829)
T ss_pred             ccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCC----------CCcccC--CccchHHHHHHHHHHhcC
Confidence            4588999999999999998776666 343332222222211111          122222  122234678999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++..++.|.+...+
T Consensus       258 npKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  258 NPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             CCccCCChhhheeceeeccc
Confidence            99999999999987765444

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.75  E-value=5.4e-05  Score=56.20  Aligned_cols=83  Identities=19%  Similarity=0.183  Sum_probs=53.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHH-HHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLK-NQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      |++.+|+|++|+++||.+-|+.||+....+.+- ..+..          .+..+.-...    ...+..+++..+|+.+|
T Consensus       235 ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd----------~i~wpE~dea----~p~Ea~dli~~LL~qnp  300 (1205)
T KOG0606|consen  235 YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD----------DIEWPEEDEA----LPPEAQDLIEQLLRQNP  300 (1205)
T ss_pred             cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh----------hccccccCcC----CCHHHHHHHHHHHHhCh
Confidence            789999999999999999999998766544332 22211          1111111111    12345688889999999


Q ss_pred             CCCCC---HHHHHHHHHHhhh
Q 039745           82 AERPS---VEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~---~~~~~~~~~~~~~   99 (127)
                      ..|.-   .-++.+|.+|...
T Consensus       301 ~~Rlgt~ga~evk~h~ff~~L  321 (1205)
T KOG0606|consen  301 LCRLGTGGALEVKQHGFFQLL  321 (1205)
T ss_pred             Hhhcccchhhhhhhccceeec
Confidence            99953   4455566655443

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.75  E-value=2.5e-05  Score=48.22  Aligned_cols=26  Identities=19%  Similarity=0.349  Sum_probs=24.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKS   27 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~   27 (127)
                      -|+-++||||+|+...||++++.||.
T Consensus       228 gY~vksDvWSLGItmiElA~lr~PY~  253 (282)
T KOG0984|consen  228 GYSVKSDVWSLGITMIEMAILRFPYE  253 (282)
T ss_pred             cceeehhhhhhhhhhhhhhhcccccc
Confidence            37889999999999999999999985

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.75  E-value=1.8e-05  Score=56.09  Aligned_cols=26  Identities=31%  Similarity=0.530  Sum_probs=23.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCc
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSR   28 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~   28 (127)
                      |+..+|+|++|++|+||+-|+.||..
T Consensus       848 ~~q~cdwws~gvil~em~~g~~pf~~  873 (1034)
T KOG0608|consen  848 YTQLCDWWSVGVILYEMLVGQPPFLA  873 (1034)
T ss_pred             ccccchhhHhhHHHHHHhhCCCCccC
Confidence            67789999999999999999999853

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.75  E-value=1.7e-05  Score=56.25  Aligned_cols=27  Identities=26%  Similarity=0.431  Sum_probs=24.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKS   27 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~   27 (127)
                      +.|+..+|.|||||++|+.+||..||-
T Consensus       199 ~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  199 KKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             cCcCceeehhhhhhHHHHHhccCCCCC
Confidence            368899999999999999999999984

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.62  E-value=0.00017  Score=49.72  Aligned_cols=75  Identities=24%  Similarity=0.391  Sum_probs=44.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhC-CCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||++|++++|++.. ...+.     .......        .-...++|.....++     .-..|+..++...
T Consensus       438 ~y~~kvdIyaLGlil~EL~~~f~T~~e-----r~~t~~d--------~r~g~ip~~~~~d~p-----~e~~ll~~lls~~  499 (516)
T KOG1033|consen  438 QYSEKVDIYALGLILAELLIQFSTQFE-----RIATLTD--------IRDGIIPPEFLQDYP-----EEYTLLQQLLSPS  499 (516)
T ss_pred             hhhhhcchhhHHHHHHHHHHHhccHHH-----HHHhhhh--------hhcCCCChHHhhcCc-----HHHHHHHHhcCCC
Confidence            488999999999999999873 11111     1111110        001112222222222     2348889999999


Q ss_pred             CCCCCCHHHHHHHH
Q 039745           81 PAERPSVEDVLWNL   94 (127)
Q Consensus        81 p~~Rp~~~~~~~~~   94 (127)
                      |..||++..+..|.
T Consensus       500 p~~RP~~~~~~~~~  513 (516)
T KOG1033|consen  500 PEERPSAIEVALHE  513 (516)
T ss_pred             cccCchHHHHhhhh
Confidence            99999666555444

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.59  E-value=0.00015  Score=44.69  Aligned_cols=26  Identities=31%  Similarity=0.561  Sum_probs=23.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCc
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSR   28 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~   28 (127)
                      ++.++|+|++|++++|+++|+.||..
T Consensus       177 ~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      177 YGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCccc
Confidence            55689999999999999999999954

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=97.56  E-value=3.2e-06  Score=58.58  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=57.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+..-|+||+|+++|--++|..||.....  +...++....        +.++..    +.+......+|+..+|+.+-.
T Consensus       743 yNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaF--------MyPp~P----W~eis~~AidlIn~LLqVkm~  808 (888)
T KOG4236|consen  743 YNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAF--------MYPPNP----WSEISPEAIDLINNLLQVKMR  808 (888)
T ss_pred             ccccccceeeeEEEEEEecccccCCCccc--hhHHhhcccc--------ccCCCc----hhhcCHHHHHHHHHHHHHHHH
Confidence            78899999999999999999999964331  2222322111        222333    344445667999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +|-+....+.|+|.
T Consensus       809 kRysvdk~lsh~Wl  822 (888)
T KOG4236|consen  809 KRYSVDKSLSHPWL  822 (888)
T ss_pred             HhcchHhhccchhh
Confidence            99999999998884

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.55  E-value=8.1e-05  Score=47.84  Aligned_cols=74  Identities=16%  Similarity=0.180  Sum_probs=44.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHH--HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDL--LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++..|+|.||++++..++|+.||+......  ...+..+..         ...++.+..+. ........+..+.+..+
T Consensus       202 ~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~---------rk~~~~P~~F~-~fs~~a~r~Fkk~lt~~  271 (378)
T KOG1345|consen  202 VNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK---------RKNPALPKKFN-PFSEKALRLFKKSLTPR  271 (378)
T ss_pred             ecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc---------ccCccCchhhc-ccCHHHHHHHHHhcCCc
Confidence            4578999999999999999999997433221  122222211         11222222211 11224457777889999


Q ss_pred             CCCCCC
Q 039745           81 PAERPS   86 (127)
Q Consensus        81 p~~Rp~   86 (127)
                      +.+|-.
T Consensus       272 ~~drck  277 (378)
T KOG1345|consen  272 FKDRCK  277 (378)
T ss_pred             ccccch
Confidence            999943

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.51  E-value=1.5e-05  Score=56.65  Aligned_cols=87  Identities=15%  Similarity=0.120  Sum_probs=53.5

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      ..+||||.|+++..|..|+.||.....+.-.... .....      ..-............+.....++.++|+.+|.+|
T Consensus       504 r~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R  576 (601)
T KOG0590|consen  504 RAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT-NNYSD------QRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKR  576 (601)
T ss_pred             chhhhhhccceEEEEecCCCccccccccccchhh-hcccc------ccccccChHHHHHhchhhHHHHHHHHccCChhhe
Confidence            4689999999999999999998432221110000 00000      0000000111122334456789999999999999


Q ss_pred             CCHHHHHHHHHHhh
Q 039745           85 PSVEDVLWNLQFAA   98 (127)
Q Consensus        85 p~~~~~~~~~~~~~   98 (127)
                      .++.++++..|+..
T Consensus       577 ~ti~~i~~d~W~~~  590 (601)
T KOG0590|consen  577 ITIEQILNDEWIRS  590 (601)
T ss_pred             ecHHHHhhChHhhh
Confidence            99999999988643

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.32  E-value=0.00083  Score=45.64  Aligned_cols=77  Identities=18%  Similarity=0.171  Sum_probs=49.4

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      .|+|.|+.|.+.||++...-||.......+...          .+++..-|.++..+    +....+++...|+.+|.+|
T Consensus       436 ~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r----------~Yqe~qLPalp~~v----pp~~rqlV~~lL~r~pskR  501 (598)
T KOG4158|consen  436 EKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR----------TYQESQLPALPSRV----PPVARQLVFDLLKRDPSKR  501 (598)
T ss_pred             chhhhhhhhhhHHHHhccCCcccccchheechh----------hhhhhhCCCCcccC----ChHHHHHHHHHhcCCcccc
Confidence            479999999999999999888854222211111          12222223343333    3355688889999999999


Q ss_pred             CCHHHHHHHHH
Q 039745           85 PSVEDVLWNLQ   95 (127)
Q Consensus        85 p~~~~~~~~~~   95 (127)
                      ++..-+.+-++
T Consensus       502 vsp~iAANvl~  512 (598)
T KOG4158|consen  502 VSPNIAANVLN  512 (598)
T ss_pred             CCccHHHhHHH
Confidence            88665554443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.87  E-value=0.0016  Score=46.05  Aligned_cols=74  Identities=19%  Similarity=0.279  Sum_probs=45.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      +...+|.||||++.+|+++|..||..   +....+...          +..       .+........+++..++..+|.
T Consensus       168 h~~a~D~ws~gvl~felltg~~pf~~---~~~~~Il~~----------~~~-------~p~~l~~~a~~~~~~l~~r~p~  227 (612)
T KOG0603|consen  168 HLSAADWWSFGVLAFELLTGTLPFGG---DTMKRILKA----------ELE-------MPRELSAEARSLFRQLFKRNPE  227 (612)
T ss_pred             cCCcccchhhhhhHHHHhhCCCCCch---HHHHHHhhh----------ccC-------CchhhhHHHHHHHHHHHhhCHH
Confidence            45689999999999999999999976   222223210          111       1122233445666677777777


Q ss_pred             CCCCH-----HHHHHHHHH
Q 039745           83 ERPSV-----EDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~-----~~~~~~~~~   96 (127)
                      +|.-.     .++.+|.++
T Consensus       228 nrLg~~~~~~~eik~h~f~  246 (612)
T KOG0603|consen  228 NRLGAGPDGVDEIKQHEFF  246 (612)
T ss_pred             HHhccCcchhHHHhccchh
Confidence            77543     445555544

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=95.84  E-value=0.086  Score=33.80  Aligned_cols=85  Identities=18%  Similarity=0.222  Sum_probs=51.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH----HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      .++...|+|++|+++++++.+..|+.....    ......+......       ...................+++..++
T Consensus       187 ~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (384)
T COG0515         187 YASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-------SLASPLSPSNPELISKAASDLLKKLL  259 (384)
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-------ccccccCccccchhhHHHHHHHHHHH
Confidence            466789999999999999999998754432    2222222110000       00001110000112245668889999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 039745           78 LKNPAERPSVEDVLWN   93 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~   93 (127)
                      ..+|..|.+......+
T Consensus       260 ~~~~~~r~~~~~~~~~  275 (384)
T COG0515         260 AKDPKNRLSSSSDLSH  275 (384)
T ss_pred             hcCchhcCCHHHHhhc
Confidence            9999999998887766

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.82  E-value=0.0091  Score=42.26  Aligned_cols=84  Identities=21%  Similarity=0.251  Sum_probs=43.9

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      ..|+|||++|.++.|+.-|...+........-..+........ .........   ...-.+.+.+..+...|+...|..
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~-~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~i  184 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQ-ELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPII  184 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCch-hHHHHHHHH---HHHHhhhHhHHHHhccCCcccccc
Confidence            3689999999999999988766543222111111111111111 000000000   112234456667788888888888


Q ss_pred             CCCHHHHH
Q 039745           84 RPSVEDVL   91 (127)
Q Consensus        84 Rp~~~~~~   91 (127)
                      ||...+..
T Consensus       185 r~l~~~~~  192 (725)
T KOG1093|consen  185 RPLPMELS  192 (725)
T ss_pred             ccchhHHh
Confidence            77544443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=94.74  E-value=0.02  Score=38.30  Aligned_cols=74  Identities=20%  Similarity=0.327  Sum_probs=43.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCC-CC-chhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPL-KS-RKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .+..+|||+||...+||..+..- .. .........+..        .+..+.++.            -+.++.+|++..
T Consensus       259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~--------~i~~len~l------------qr~~i~kcl~~e  318 (458)
T KOG1266|consen  259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIAN--------VIIGLENGL------------QRGSITKCLEGE  318 (458)
T ss_pred             cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhh--------heeeccCcc------------ccCcCcccccCC
Confidence            34578999999999999876532 11 111110001100        000111111            126777999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++..++.|+-.
T Consensus       319 P~~rp~ar~llfHpll  334 (458)
T KOG1266|consen  319 PNGRPDARLLLFHPLL  334 (458)
T ss_pred             CCCCcchhhhhcCcee
Confidence            9999999999887653

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=94.48  E-value=0.052  Score=41.38  Aligned_cols=80  Identities=19%  Similarity=0.212  Sum_probs=49.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHH-HHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLK-NQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ....+|+|++|++++|.++|.+||.....++.- .+.           ...+....   ..........+++...+..++
T Consensus      1012 hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~-----------~~~~~~p~---g~~~~s~~aq~~~~~ll~~~~ 1077 (1205)
T KOG0606|consen 1012 HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENIL-----------NRDIPWPE---GPEEGSYEAQDLINRLLTEEP 1077 (1205)
T ss_pred             CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccc-----------cCCCCCCC---CccccChhhhhhhhhhhccCc
Confidence            456789999999999999999999755544322 111           11111111   011122244577778899999


Q ss_pred             CCCCCHH---HHHHHHHH
Q 039745           82 AERPSVE---DVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~---~~~~~~~~   96 (127)
                      .+|..+.   ++..|.+|
T Consensus      1078 ~qr~~a~~~~e~k~~~~~ 1095 (1205)
T KOG0606|consen 1078 TQRLGAKGAAEVKGHPFF 1095 (1205)
T ss_pred             hhccCcccccccccCCcc
Confidence            9998766   44455543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=82.46  E-value=0.064  Score=38.78  Aligned_cols=85  Identities=12%  Similarity=0.147  Sum_probs=53.1

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      .....|+||.|+++..+++|..|++....... ....+...      ........    +........+++.+++..++.
T Consensus       207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~------~~~~~~~~----~~~~~~~~~~~l~k~l~~~~~  275 (601)
T KOG0590|consen  207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSWKSN------KGRFTQLP----WNSISDQAHDLLHKILKENPS  275 (601)
T ss_pred             cCCCcccccccccccccccCCCCccccccccc-cceeeccc------ccccccCc----cccCChhhhhcccccccCCch
Confidence            35688999999999999999999754332210 11100000      00000111    112223445777889989999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      .|.+.+++..+.+...
T Consensus       276 ~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  276 NRLSIEELKLDNWLSS  291 (601)
T ss_pred             hccccccccccccccc
Confidence            9999999998888766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	127
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-10
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-04
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		6e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		6e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		6e-04

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 1   GKLEDKIDIYDFGLILLEIIVGRP--LKS--RKEVDLLKNQLQAVITADESARRSMVDPA 56
           G+L +K D+Y FG++L E++  R   ++S  R+ V+L +    AV + +      +VDP 
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPN 272
Query: 57  VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
           +      ESL+   +  V+CL  +  +RPS+ DVLW L++A ++Q++
Sbjct: 273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 1   GKLEDKIDIYDFGLILLEIIVGRP--LKS--RKEVDLLKNQLQAVITADESARRSMVDPA 56
           G+L +K D+Y FG++L E++  R   ++S  R+ V+L +    AV + +      +VDP 
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPN 272
Query: 57  VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
           +      ESL+   +  V+CL  +  +RPS+ DVLW L++A ++Q++
Sbjct: 273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 1   GKLEDKIDIYDFGLILLEIIVGR------PLKSRKEVDLLKNQLQAVITADESARRSMVD 54
           GK  +K D++ +G++LLE+I G+       L +  +V LL + ++ ++   E    ++VD
Sbjct: 218 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL-DWVKGLLK--EKKLEALVD 274
Query: 55  PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHS-QSSEGSP 113
             +     DE ++ +++V + C   +P ERP + +V+  L+    + + W   Q  E   
Sbjct: 275 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE-GDGLAERWEEWQKEEMFR 333
Query: 114 ISPPWPSH 121
               +P+H
Sbjct: 334 QDFNYPTH 341

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 1   GKLEDKIDIYDFGLILLEIIVGR------PLKSRKEVDLLKNQLQAVITADESARRSMVD 54
           GK  +K D++ +G++LLE+I G+       L +  +V LL + ++ ++   E    ++VD
Sbjct: 210 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL-DWVKGLLK--EKKLEALVD 266
Query: 55  PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
             +     DE ++ +++V + C   +P ERP + +V+  L+
Sbjct: 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 1   GKLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
           G++  K DIY FG++LLEII G P +   +E  LL +  + +    E      +D  +N 
Sbjct: 203 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE-EKTIEDYIDKKMND 261
Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
           A    S++ M  V  +CL +   +RP ++ V   LQ
Sbjct: 262 AD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 1   GKLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
           G++  K DIY FG++LLEII G P +   +E  LL +  + +    E      +D  +N 
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE-EKTIEDYIDKKMND 267
Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
           A    S++ M  V  +CL +   +RP ++ V   LQ
Sbjct: 268 AD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 1   GKLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
           G++  K DIY FG++LLEII G P +   +E  LL +  + +    E      +D  +N 
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE-EKTIEDYIDKKMND 267
Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
           A    S++ M  V  +CL +   +RP ++ V   LQ
Sbjct: 268 AD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	127
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-17
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-12
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-05
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 75.3 bits (186), Expect = 1e-17
 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 7/107 (6%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRP----LKSRKEVDLLKNQLQAVITADESARRSMVDPA 56
           G+L +K D+Y FG++L E++  R        R+ V+L +    AV + +      +VDP 
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPN 272

Query: 57  VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
           +      ESL+   +  V+CL  +  +RPS+ DVLW L++A ++Q++
Sbjct: 273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 11/101 (10%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPL--KSRKEVDLL---KNQLQAVITADESARRSMVDP 55
           G++  K DIY FG++LLEII G P   + R+   LL   +         +E      +D 
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED-----EEKTIEDYIDK 263

Query: 56  AVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 96
            +N A        M  V  +CL +   +RP ++ V   LQ 
Sbjct: 264 KMNDADSTSVEA-MYSVASQCLHEKKNKRPDIKKVQQLLQE 303

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESAR--------RSM 52
           GK  +K D++ +G++LLE+I G     ++  DL +      +   +  +         ++
Sbjct: 210 GKSSEKTDVFGYGVMLLELITG-----QRAFDLARLANDDDVMLLDWVKGLLKEKKLEAL 264

Query: 53  VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
           VD  +     DE ++ +++V + C   +P ERP + +V+
Sbjct: 265 VDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 9/105 (8%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESAR-------RSMVDPAVN 58
           +ID+Y  GL+L E+       +   VD      +  I    S              P + 
Sbjct: 218 RIDMYAMGLVLWELASRCTA-ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLR 276

Query: 59  KACL-DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD 102
                   +  + E    C   +   R S   V   +    ++ +
Sbjct: 277 DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLTN 321

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           + D+Y FG++L E++ G+ P  +        N    +I        S     V   C  +
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSN-------INNRDQIIEMVGRGSLSPDLSKVRSNC-PK 256

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            +K +M     CL K   ERPS   +L  ++
Sbjct: 257 RMKRLMA---ECLKKKRDERPSFPRILAEIE 284

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 15/91 (16%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           K D++ +G+IL E+I  R P       ++     + +       R     P + K    +
Sbjct: 183 KCDVFSWGIILWEVITRRKPFD-----EIGGPAFRIMWAVHNGTR-----PPLIKNL-PK 231

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            ++++M    RC  K+P++RPS+E+++  + 
Sbjct: 232 PIESLMT---RCWSKDPSQRPSMEEIVKIMT 259

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 13/90 (14%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
           K+D++ FG++L EII       R   D            +         P     C   S
Sbjct: 202 KVDVFSFGIVLCEII------GRVNADPDYLPRTMDFGLNVRGFLDRYCP---PNC-PPS 251

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
              +     RC   +P +RPS   +   L+
Sbjct: 252 FFPITV---RCCDLDPEKRPSFVKLEHWLE 278

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 14/91 (15%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           K D Y F +IL  I+ G  P       +    +++ +    E   R    P + + C   
Sbjct: 208 KADTYSFAMILYTILTGEGPFD-----EYSYGKIKFINMIREEGLR----PTIPEDC-PP 257

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            L+ ++E    C   +P +RP    ++  L 
Sbjct: 258 RLRNVIE---LCWSGDPKKRPHFSYIVKELS 285

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 16/91 (17%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
             D++ +G++L E++ G  P +         + L        +         +   C  E
Sbjct: 194 GSDVWSYGVLLWELLTGEVPFRG-------IDGLAVAYGVAMNKLA----LPIPSTC-PE 241

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
               +ME    C   +P  RPS  ++L  L 
Sbjct: 242 PFAKLME---DCWNPDPHSRPSFTNILDQLT 269

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 16/91 (17%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           K D+Y FG+IL E+   + P       +L  N  Q V       +R      + +   + 
Sbjct: 219 KSDVYSFGVILWELATLQQPWG-----NL--NPAQVVAAVGFKCKR----LEIPRNL-NP 266

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            +  ++E    C    P +RPS   ++  L+
Sbjct: 267 QVAAIIE---GCWTNEPWKRPSFATIMDLLR 294

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 16/91 (17%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
             D++  G I  E+     P K+       +     +       +     P +++  + +
Sbjct: 223 HSDVFALGTIWYELHAREWPFKT-------QPAEAIIWQMGTGMK-----PNLSQIGMGK 270

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            +  ++     C      ERP+   ++  L+
Sbjct: 271 EISDILL---FCWAFEQEERPTFTKLMDMLE 298

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 17/86 (19%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
           K+DI+  GLIL E++      ++ E   +   ++ +       ++               
Sbjct: 256 KVDIFSLGLILFELLY--SFSTQMERVRIITDVRNLKFPLLFTQKY-------------- 299

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
                 +    L  +P ERP   D++
Sbjct: 300 -PQEHMMVQDMLSPSPTERPEATDII 324

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 17/86 (19%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
           K+DI+  GLIL E++   P  ++ E       ++ +       ++               
Sbjct: 210 KVDIFSLGLILFELLY--PFSTQMERVRTLTDVRNLKFPPLFTQKY-------------- 253

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
                 +    L  +P ERP   +++
Sbjct: 254 -PCEYVMVQDMLSPSPMERPEAINII 278

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 16/91 (17%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
             D++ F ++L E++    P       DL  + ++  +       R    P +       
Sbjct: 191 SADMWSFAVLLWELVTREVPFA-----DL--SNMEIGMKVALEGLR----PTIPPGI-SP 238

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            +  +M+    C+ ++PA+RP  + ++  L+
Sbjct: 239 HVSKLMK---ICMNEDPAKRPKFDMIVPILE 266

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 36.6 bits (85), Expect = 9e-04
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 18/102 (17%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA---VITADESARRSMVDPAVNK--- 59
             D+Y FGLIL E+        R     +  + Q     +   + +   M +    K   
Sbjct: 232 MADMYSFGLILWEVA------RRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLR 285

Query: 60  ------ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
                    DE L+ M ++   C   NPA R +   V   L 
Sbjct: 286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	127
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.75
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.73
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.73
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.73
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.71
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.71
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.71
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.71
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.69
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.68
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.66
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.65
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.65
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.64
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.61
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.61
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.6
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.59
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.57
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.57
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.56
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.56
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.56
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.56
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.55
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.55
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.55
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.55
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.54
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.54
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.54
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.54
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.53
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.53
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.53
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.53
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.53
3niz_A	311	Rhodanese family protein; structural genomics, str	99.53
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.53
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.53
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.53
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.53
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.53
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.53
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.52
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.52
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.52
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.52
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.52
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.52
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.52
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.52
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.52
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.52
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.52
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.52
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.52
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.52
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.51
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.51
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.51
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.51
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.51
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.51
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.51
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.51
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.51
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.51
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.51
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.51
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.51
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.5
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.5
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.5
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.5
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.5
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.5
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.5
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.5
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.5
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.5
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.5
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.5
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.5
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.5
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.49
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.49
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.49
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.49
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.49
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.49
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.49
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.49
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.49
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.49
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.49
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.49
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.49
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.48
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.48
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.48
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.48
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.48
3bhy_A	283	Death-associated protein kinase 3; death associate	99.48
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.48
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.48
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.48
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.47
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.47
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.47
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.47
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.47
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.47
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.47
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.47
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.47
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.47
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.47
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.47
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.47
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.47
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.46
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.46
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.46
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.46
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.46
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.46
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.46
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.46
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.46
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.46
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.46
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.45
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.45
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.45
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.45
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.45
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.45
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.45
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.45
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.45
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.45
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.45
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.45
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.45
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.45
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.44
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.44
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.44
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.44
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.44
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.44
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.44
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.44
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.44
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.44
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.44
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.44
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.44
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.44
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.44
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.44
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.44
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.43
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.43
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.43
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.43
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.43
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.43
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.43
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.43
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.43
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.43
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.43
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.42
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.42
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.42
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.42
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.42
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.42
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.42
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.42
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.42
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.42
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.42
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.41
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.41
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.41
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.41
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.41
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.4
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.4
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.4
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.4
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.4
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.4
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.4
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.4
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.4
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.4
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.39
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.39
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.39
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.39
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.39
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.39
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.39
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.39
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.38
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.38
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.38
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.38
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.38
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.38
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.38
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.37
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.37
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.37
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.37
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.37
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.37
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.36
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.36
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.36
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.35
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.34
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.34
3uqc_A	286	Probable conserved transmembrane protein; structur	99.33
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.33
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.33
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.33
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.32
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.31
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.31
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.31
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.31
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.3
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.3
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.3
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.29
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.29
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.29
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.28
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.28
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.28
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.21
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.1
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.81
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.8
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.21

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.75  E-value=3.6e-18  Score=109.77  Aligned_cols=87  Identities=21%  Similarity=0.393  Sum_probs=60.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||||||++|||++|+.||.... .......+.          .....|... .....++..+.+|+.+||..+
T Consensus       213 ~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~----------~~~~~p~~~-~~~~~~~~~l~~li~~cl~~d  281 (307)
T 3omv_A          213 PFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG----------RGYASPDLS-KLYKNCPKAMKRLVADCVKKV  281 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH----------TTCCCCCST-TSCTTSCHHHHHHHHHHTCSS
T ss_pred             CCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHh----------cCCCCCCcc-cccccchHHHHHHHHHHcCCC
Confidence            58899999999999999999999996433 222222221          111112111 112233456779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++.+++.+..
T Consensus       282 P~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          282 KEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             STTSCCHHHHHHHHHHHHT
T ss_pred             HhHCcCHHHHHHHHHHHhc
Confidence            9999999999999986654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.73  E-value=1.6e-18  Score=110.66  Aligned_cols=84  Identities=21%  Similarity=0.425  Sum_probs=58.2

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSR-KEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      |+|+.++||||+||++|||++|+.||.. .....+...+   ..       ....+......    ...+.+|+.+||..
T Consensus       204 ~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i---~~-------~~~~~~~~~~~----~~~~~~li~~~L~~  269 (290)
T 3fpq_A          204 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TS-------GVKPASFDKVA----IPEVKEIIEGCIRQ  269 (290)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TT-------TCCCGGGGGCC----CHHHHHHHHHHSCS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHH---Hc-------CCCCCCCCccC----CHHHHHHHHHHccC
Confidence            4689999999999999999999999953 3333222221   00       00111111111    23567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ||.+||++.++++|+|+..
T Consensus       270 dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          270 NKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             SGGGSCCHHHHHTSGGGC-
T ss_pred             ChhHCcCHHHHhcCccccC
Confidence            9999999999999998743

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.73  E-value=8e-18  Score=109.18  Aligned_cols=86  Identities=22%  Similarity=0.326  Sum_probs=62.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||||||++|||++ |+.||...........+.   ..        ..+..+..    ++..+.+|+.+||..+
T Consensus       236 ~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~---~g--------~~~~~p~~----~~~~~~~li~~cl~~d  300 (329)
T 4aoj_A          236 KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT---QG--------RELERPRA----CPPEVYAIMRGCWQRE  300 (329)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH---HT--------CCCCCCTT----CCHHHHHHHHHHCCSS
T ss_pred             CCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH---cC--------CCCCCccc----ccHHHHHHHHHHcCcC
Confidence            58899999999999999998 899996554333222221   10        11222222    2346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      |.+||++.+++.++..+.+.++
T Consensus       301 P~~RPs~~ei~~~L~~l~~~pp  322 (329)
T 4aoj_A          301 PQQRHSIKDVHARLQALAQAPP  322 (329)
T ss_dssp             TTTSCCHHHHHHHHHHHHHSCC
T ss_pred             hhHCcCHHHHHHHHHHHhhCCc
Confidence            9999999999999988776543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.73  E-value=5.7e-18  Score=108.97  Aligned_cols=81  Identities=19%  Similarity=0.302  Sum_probs=58.5

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++|||||||++|||++ |..||...........+   ...        ..+..+    ..++..+.+|+..||..
T Consensus       222 ~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i---~~~--------~~~~~p----~~~~~~~~~li~~C~~~  286 (308)
T 4gt4_A          222 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI---RNR--------QVLPCP----DDCPAWVYALMIECWNE  286 (308)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH---HTT--------CCCCCC----TTCCHHHHHHHHHHTCS
T ss_pred             CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HcC--------CCCCCc----ccchHHHHHHHHHHcCC
Confidence            468999999999999999998 89999655443332222   110        011122    22344677999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQF   96 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~   96 (127)
                      +|.+||++.+++.+|.-
T Consensus       287 dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          287 FPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             SGGGSCCHHHHHHHHHT
T ss_pred             ChhHCcCHHHHHHHHHh
Confidence            99999999999998863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.71  E-value=1e-17  Score=106.12  Aligned_cols=83  Identities=17%  Similarity=0.271  Sum_probs=60.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+||++|||++|+.||.......+...+.   ..         ....+...    ...+.+|+.+||..||.
T Consensus       189 ~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~---~~---------~~~~p~~~----s~~~~~li~~~L~~dP~  252 (275)
T 3hyh_A          189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS---NG---------VYTLPKFL----SPGAAGLIKRMLIVNPL  252 (275)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HT---------CCCCCTTS----CHHHHHHHHHHSCSSGG
T ss_pred             CCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---cC---------CCCCCCCC----CHHHHHHHHHHccCChh
Confidence            4579999999999999999999997655443322221   10         11111122    23567999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhcc
Q 039745           83 ERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +||++.++++|.|+....+
T Consensus       253 ~R~s~~eil~hpw~k~~~p  271 (275)
T 3hyh_A          253 NRISIHEIMQDDWFKVDLP  271 (275)
T ss_dssp             GSCCHHHHHHCHHHHTTCC
T ss_pred             HCcCHHHHHcCcccccCCC
Confidence            9999999999999865543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.71  E-value=7.9e-18  Score=110.07  Aligned_cols=86  Identities=17%  Similarity=0.301  Sum_probs=61.1

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      +.|+.++|||||||++|||++ |+.||..... ......+.           .-..+..+..+    ...+.+|+..||.
T Consensus       262 ~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~-----------~g~~~~~p~~~----~~~~~~li~~c~~  326 (353)
T 4ase_A          262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-----------EGTRMRAPDYT----TPEMYQTMLDCWH  326 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-----------HTCCCCCCTTC----CHHHHHHHHHHTC
T ss_pred             CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-----------cCCCCCCCccC----CHHHHHHHHHHcC
Confidence            368999999999999999998 8999964332 22222221           11112222222    3457799999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhhcc
Q 039745           79 KNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+|.+||++.++++|+..+.+..
T Consensus       327 ~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          327 GEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             cChhHCcCHHHHHHHHHHHHHHh
Confidence            99999999999999998776543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.71  E-value=2.9e-17  Score=106.98  Aligned_cols=87  Identities=18%  Similarity=0.332  Sum_probs=61.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+           .....+...  ........+.+|+.+||..||
T Consensus       246 ~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-----------~~~~~~~~~--~~~~~s~~~~dli~~~L~~dP  312 (346)
T 4fih_A          246 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-----------RDNLPPRLK--NLHKVSPSLKGFLDRLLVRDP  312 (346)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHSSCCCCS--CGGGSCHHHHHHHHHHSCSST
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-----------HcCCCCCCC--ccccCCHHHHHHHHHHcCCCh
Confidence            4889999999999999999999999655433222222           111111111  112223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|+|+....+
T Consensus       313 ~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          313 AQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             TTSCCHHHHTTCGGGGGCCC
T ss_pred             hHCcCHHHHhcCHhhcCCCC
Confidence            99999999999999865443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.71  E-value=1.5e-17  Score=106.65  Aligned_cols=84  Identities=17%  Similarity=0.271  Sum_probs=59.8

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++|||||||++|||++ |+.||...........+.   ..        ..+..+..    ++..+.+|+.+||..
T Consensus       205 ~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~---~~--------~~~~~p~~----~~~~~~~li~~cl~~  269 (299)
T 4asz_A          205 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT---QG--------RVLQRPRT----CPQEVYELMLGCWQR  269 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH---HT--------CCCCCCTT----CCHHHHHHHHHHTCS
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---cC--------CCCCCCcc----chHHHHHHHHHHcCC
Confidence            468999999999999999998 899997554433322221   10        01112222    234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.++...+..+..
T Consensus       270 dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          270 EPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHHh
Confidence            99999999999888776554

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.69  E-value=2.5e-17  Score=107.42  Aligned_cols=83  Identities=20%  Similarity=0.284  Sum_probs=60.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||.......+...+.          .... +......    ...+.+|+.+||..||
T Consensus       201 ~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~----------~~~~-~~~~~~~----s~~~~~li~~~L~~dP  265 (350)
T 4b9d_A          201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII----------SGSF-PPVSLHY----SYDLRSLVSQLFKRNP  265 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH----------HTCC-CCCCTTS----CHHHHHHHHHHTCSSG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH----------cCCC-CCCCccC----CHHHHHHHHHHccCCh
Confidence            48899999999999999999999997655433322110          0101 1122222    2356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.|+...
T Consensus       266 ~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          266 RDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             GGSCCHHHHHTSHHHHTT
T ss_pred             hHCcCHHHHhcCHHhhcC
Confidence            999999999999998654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.68  E-value=1.1e-16  Score=106.69  Aligned_cols=86  Identities=19%  Similarity=0.346  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+           ..-..+....  .......+.+|+.+||..||
T Consensus       323 ~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-----------~~~~~~~~~~--~~~~s~~~~dli~~~L~~dP  389 (423)
T 4fie_A          323 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-----------RDNLPPRLKN--LHKVSPSLKGFLDRLLVRDP  389 (423)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHSCCCCCSC--TTSSCHHHHHHHHHHSCSST
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-----------HcCCCCCCcc--cccCCHHHHHHHHHHcCCCh
Confidence            4889999999999999999999999654433222222           1111111111  11123356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+|+++.++++|.|+....
T Consensus       390 ~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          390 AQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             TTSCCHHHHTTCGGGGGCC
T ss_pred             hHCcCHHHHhcCHHhcCCC
Confidence            9999999999999986543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.66  E-value=7.7e-17  Score=104.66  Aligned_cols=86  Identities=16%  Similarity=0.129  Sum_probs=59.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||.......+...+.  ...          + .....+......+.+|+.+||..||
T Consensus       232 ~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~--~~~----------~-~~~~~~~~~s~~~~~li~~~L~~dP  298 (336)
T 4g3f_A          232 PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA--SEP----------P-PIREIPPSCAPLTAQAIQEGLRKEP  298 (336)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH--HSC----------C-GGGGSCTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH--cCC----------C-CchhcCccCCHHHHHHHHHHccCCH
Confidence            48899999999999999999999996543322221110  000          0 0011112223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++++......
T Consensus       299 ~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          299 VHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             GGSCCHHHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHHhh
Confidence            9999999999998876543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.65  E-value=6.6e-17  Score=103.77  Aligned_cols=81  Identities=16%  Similarity=0.233  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+.   .         .....+...    ...+.+|+.+||..||
T Consensus       202 ~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~---~---------~~~~~p~~~----s~~~~~li~~~L~~dP  265 (304)
T 3ubd_A          202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL---K---------AKLGMPQFL----SPEAQSLLRMLFKRNP  265 (304)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H---------CCCCCCTTS----CHHHHHHHHHHTCSSG
T ss_pred             CCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH---c---------CCCCCCCcC----CHHHHHHHHHHcccCH
Confidence            48899999999999999999999997655433322220   0         011122222    2356799999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|++     ++++++|+||..
T Consensus       266 ~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          266 ANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             GGSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHCCCCCcCCHHHHHcCccccC
Confidence            99998     579999999743

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.65  E-value=7.9e-17  Score=106.87  Aligned_cols=98  Identities=19%  Similarity=0.212  Sum_probs=63.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhh-----------hcCCcCcc---cccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRS-----------MVDPAVNK---ACLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~~~~~   66 (127)
                      .|+.++||||+||+++||++|+.||... ...++..+....+.........           ...+....   .......
T Consensus       239 ~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  318 (398)
T 4b99_A          239 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGAD  318 (398)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCC
T ss_pred             CCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCC
Confidence            3688999999999999999999999644 4444454543333222111000           00111000   0001122


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..||.+|+|+.++++|+|+...
T Consensus       319 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          319 RQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            457799999999999999999999999998654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.64  E-value=2.1e-16  Score=103.71  Aligned_cols=96  Identities=19%  Similarity=0.258  Sum_probs=61.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCC--chhHHHHHHHHHHHHhhchHHHhhhc--------------------------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKS--RKEVDLLKNQLQAVITADESARRSMV--------------------------   53 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------   53 (127)
                      .|+.++||||+||+++||++|+.||.  .....++..+....+...........                          
T Consensus       223 ~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  302 (361)
T 4f9c_A          223 NQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMD  302 (361)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---
T ss_pred             CCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccc
Confidence            37889999999999999999999984  33445555554433321110000000                          


Q ss_pred             --CCcCc---------ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           54 --DPAVN---------KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        54 --~~~~~---------~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                        .+...         ..........+.+|+.+||..||.+|+|+.++++|+||.
T Consensus       303 ~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~  357 (361)
T 4f9c_A          303 SSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFK  357 (361)
T ss_dssp             -------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGT
T ss_pred             ccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence              00000         000111223577999999999999999999999999974

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.61  E-value=4.3e-16  Score=100.10  Aligned_cols=91  Identities=20%  Similarity=0.240  Sum_probs=59.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH------------HHHHHHHHHHhhchHHHhhhcCCcCcccc-cHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD------------LLKNQLQAVITADESARRSMVDPAVNKAC-LDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   69 (127)
                      |+.++|||||||++|||++|.+|+......            ....+...       .......|..+... ..+....+
T Consensus       195 ~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~rp~~p~~~~~~~~~~~l  267 (303)
T 3hmm_A          195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV-------VCEQKLRPNIPNRWQSCEALRVM  267 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH-------HTTSCCCCCCCGGGGSSHHHHHH
T ss_pred             cChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHH-------HhcccCCCCCCccccchHHHHHH
Confidence            556899999999999999998765321110            00111100       11112233333222 23456678


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+|+.+||..||.+|||+.++++.+..+.+.
T Consensus       268 ~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          268 AKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            8999999999999999999999998876553

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.61  E-value=1.4e-16  Score=102.37  Aligned_cols=79  Identities=13%  Similarity=0.240  Sum_probs=55.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||.......+...+.   .         ....++...+    ..+.+|+.+||..||
T Consensus       210 ~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~---~---------~~~~~p~~~s----~~~~dli~~lL~~dp  273 (311)
T 4aw0_A          210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII---K---------LEYDFPEKFF----PKARDLVEKLLVLDA  273 (311)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H---------TCCCCCTTCC----HHHHHHHHHHSCSSG
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---c---------CCCCCCcccC----HHHHHHHHHHccCCH
Confidence            47889999999999999999999997655433322220   0         0112222222    356799999999999


Q ss_pred             CCCCCHHHH------HHHHHH
Q 039745           82 AERPSVEDV------LWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~------~~~~~~   96 (127)
                      .+|+++.++      ++|+||
T Consensus       274 ~~R~t~~e~~~~~~i~~Hp~F  294 (311)
T 4aw0_A          274 TKRLGCEEMEGYGPLKAHPFF  294 (311)
T ss_dssp             GGSTTSGGGTCHHHHHTSGGG
T ss_pred             hHCcChHHHcCCHHHHCCCCc
Confidence            999999875      556655

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.60  E-value=8.6e-16  Score=99.04  Aligned_cols=101  Identities=29%  Similarity=0.564  Sum_probs=69.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHH-HhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAV-ITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|+.||.............+. .......+....++.............+.+++.+||..+
T Consensus       217 ~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  296 (321)
T 2qkw_B          217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALS  296 (321)
T ss_dssp             BCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSS
T ss_pred             CCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCC
Confidence            4788999999999999999999998532211110111000 001111233444555555556777888999999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      |.+||++.++++++........
T Consensus       297 P~~Rps~~ell~~L~~~l~~~~  318 (321)
T 2qkw_B          297 SEDRPSMGDVLWKLEYALRLQE  318 (321)
T ss_dssp             GGGSCCHHHHHHHHHHHHHSSC
T ss_pred             cccCcCHHHHHHHHHHHhhccc
Confidence            9999999999999998776543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.59  E-value=7.9e-16  Score=106.23  Aligned_cols=85  Identities=12%  Similarity=0.176  Sum_probs=59.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|..||...........+.   .         ....+...........+.+|+.+||..||
T Consensus       332 ~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~---~---------~~~~~~~~~~~~~s~~~~dli~~~L~~dp  399 (573)
T 3uto_A          332 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK---S---------CDWNMDDSAFSGISEDGKDFIRKLLLADP  399 (573)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---T---------TCCCCCSGGGTTSCHHHHHHHHTTSCSSG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH---h---------CCCCCCcccccCCCHHHHHHHHHHccCCh
Confidence            37889999999999999999999997554433222220   0         00111111112223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|.|+..
T Consensus       400 ~~R~t~~e~l~Hpw~~~  416 (573)
T 3uto_A          400 NTRMTIHQALEHPWLTP  416 (573)
T ss_dssp             GGSCCHHHHHHSTTTSC
T ss_pred             hHCcCHHHHhcCcCcCC
Confidence            99999999999998754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.57  E-value=2.4e-15  Score=99.36  Aligned_cols=98  Identities=20%  Similarity=0.292  Sum_probs=63.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcCCc------------------Cccccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVDPA------------------VNKACL   62 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~   62 (127)
                      .|+.++||||+||+++||++|+.||... ...++..++.....+....+.....+.                  ......
T Consensus       207 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (388)
T 3oz6_A          207 KYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT  286 (388)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHH
T ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCc
Confidence            4788999999999999999999999543 344445554433332221111111110                  000000


Q ss_pred             ------------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           63 ------------DESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        63 ------------~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                                  ......+.+|+.+||..||.+||++.++++|+|+..-
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          287 KWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             HHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             chhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence                        0112357799999999999999999999999997543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.57  E-value=2.4e-15  Score=97.88  Aligned_cols=86  Identities=22%  Similarity=0.342  Sum_probs=57.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|++++||++|+.||...... ...+.            ...++......+......+.+|+.+||..+|
T Consensus       196 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp  262 (343)
T 3dbq_A          196 KISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLH------------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP  262 (343)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHH------------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSST
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCcchhhhhH-HHHHH------------HHhcCCcccCCcccCCHHHHHHHHHHcCCCh
Confidence            4677899999999999999999999643211 11111            1111111111111112356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++|+|+....
T Consensus       263 ~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          263 KQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             TTSCCHHHHHTSHHHHSCC
T ss_pred             hHCCCHHHHHhCccccccC
Confidence            9999999999999987543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.56  E-value=2.6e-15  Score=99.37  Aligned_cols=84  Identities=20%  Similarity=0.269  Sum_probs=57.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .|+.++||||+||+++||++|..||.....  ..+..+.           ............    ...+.+|+.+||..
T Consensus       243 ~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~~~~li~~~L~~  307 (390)
T 2zmd_A          243 KISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-----------DPNHEIEFPDIP----EKDLQDVLKCCLKR  307 (390)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH-----------CTTSCCCCCCCS----CHHHHHHHHHHTCS
T ss_pred             CCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh-----------CccccCCCCccc----hHHHHHHHHHHccc
Confidence            478899999999999999999999964321  1111111           000111111111    23567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhc
Q 039745           80 NPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      +|.+||++.++++|+|+....
T Consensus       308 dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          308 DPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             STTTSCCHHHHHTSHHHHSCC
T ss_pred             ChhhCCCHHHHhhCcCccccC
Confidence            999999999999999986543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=1e-14  Score=95.82  Aligned_cols=98  Identities=17%  Similarity=0.262  Sum_probs=64.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhc-----------C---CcCcccccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMV-----------D---PAVNKACLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~~~~   66 (127)
                      .|+.++||||+||+++||++|+.||... ...++..+....+.........+.           .   ............
T Consensus       202 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (367)
T 1cm8_A          202 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNAS  281 (367)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCC
T ss_pred             CCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCC
Confidence            5788999999999999999999999644 344444454433332221111110           0   000011112223


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..||.+||++.++++|+|+...
T Consensus       282 ~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          282 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence            467799999999999999999999999997653

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.56  E-value=2.2e-14  Score=94.57  Aligned_cols=98  Identities=20%  Similarity=0.278  Sum_probs=62.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhh------hc----C----------------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRS------MV----D----------------   54 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~----~----------------   54 (127)
                      .|+.++||||+||+++||++|+.||.... ...+..+.......+......      ..    +                
T Consensus       234 ~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (382)
T 2vx3_A          234 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYK  313 (382)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSC
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccC
Confidence            47889999999999999999999996543 333444443222222111100      00    0                


Q ss_pred             -CcC--------------------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           55 -PAV--------------------NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        55 -~~~--------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                       +..                    ...........+.+|+.+||..||.+|||+.++++|+|+...
T Consensus       314 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          314 PPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             CTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             CcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence             000                    000112233578899999999999999999999999997543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.56  E-value=5.4e-15  Score=98.71  Aligned_cols=97  Identities=21%  Similarity=0.340  Sum_probs=65.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcC-------CcCccc-----ccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVD-------PAVNKA-----CLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~   68 (127)
                      .|+.++||||+||+++||++|+.||... ...++..++...+......+.....       +.....     ........
T Consensus       233 ~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  312 (420)
T 1j1b_A          233 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE  312 (420)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHH
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHH
Confidence            4788999999999999999999999643 3445555554444333322222211       111000     01112346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.+|+.+||..+|.+||++.+++.|.|+..
T Consensus       313 ~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          313 AIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             HHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence            789999999999999999999999999854

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.55  E-value=1.9e-14  Score=92.00  Aligned_cols=85  Identities=16%  Similarity=0.239  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|++++||++|..||...........+.  ..       ........    ......+.+|+.+||..+|
T Consensus       192 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~--~~-------~~~~~~~~----~~~~~~~~~li~~~l~~dp  258 (297)
T 3fxz_A          192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA--TN-------GTPELQNP----EKLSAIFRDFLNRCLEMDV  258 (297)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH--HH-------CSCCCSCG----GGSCHHHHHHHHHHSCSST
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hC-------CCCCCCCc----cccCHHHHHHHHHHccCCh
Confidence            46789999999999999999999996544322211110  00       00011111    1223356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.|+...
T Consensus       259 ~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          259 EKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             TTSCCHHHHTTCGGGGGC
T ss_pred             hHCcCHHHHhhChhhccc
Confidence            999999999999997654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.55  E-value=2.6e-14  Score=96.56  Aligned_cols=97  Identities=19%  Similarity=0.261  Sum_probs=64.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhh-------cC--CcC-------------c
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSM-------VD--PAV-------------N   58 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~-------------~   58 (127)
                      .|+.++||||+||+++||++|+.||... ...++..++...+..........       ..  +..             .
T Consensus       239 ~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (464)
T 3ttj_A          239 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF  318 (464)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGS
T ss_pred             CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccc
Confidence            4788999999999999999999999644 34444555544333322111110       00  000             0


Q ss_pred             c---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           59 K---ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        59 ~---~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .   .........+.+|+.+||..||.+||++.++++|+|+..
T Consensus       319 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          319 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            0   001112456889999999999999999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.55  E-value=3.7e-15  Score=99.77  Aligned_cols=101  Identities=18%  Similarity=0.248  Sum_probs=62.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhh------cCCc------------------
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSM------VDPA------------------   56 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~------------------   56 (127)
                      .|+.++||||+||+++||++|..||.... ...+..+...........+...      .+..                  
T Consensus       275 ~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (429)
T 3kvw_A          275 RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVL  354 (429)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEE
T ss_pred             CCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccc
Confidence            47889999999999999999999996443 3444444433332222111100      0000                  


Q ss_pred             -------------CcccccH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 039745           57 -------------VNKACLD-----ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        57 -------------~~~~~~~-----~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                                   .......     .....+.+|+.+||..||.+||++.++++|+|+....+.
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~  418 (429)
T 3kvw_A          355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK  418 (429)
T ss_dssp             CCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-----
T ss_pred             cccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCC
Confidence                         0000000     012457799999999999999999999999998765443

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.55  E-value=1e-14  Score=92.25  Aligned_cols=84  Identities=20%  Similarity=0.364  Sum_probs=60.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+.           . .........    ...+.+|+.+||..+|
T Consensus       183 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----------~-~~~~~~~~~----~~~~~~li~~~l~~~p  246 (279)
T 3fdn_A          183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-----------R-VEFTFPDFV----TEGARDLISRLLKHNP  246 (279)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-----------H-TCCCCCTTS----CHHHHHHHHHHCCSSG
T ss_pred             CCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH-----------h-CCCCCCCcC----CHHHHHHHHHHhccCh
Confidence            35779999999999999999999997555433222220           0 111111112    2356699999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|+|+.....
T Consensus       247 ~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          247 SQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             GGSCCHHHHHHCHHHHHHCS
T ss_pred             hhCCCHHHHhhCccccCCcc
Confidence            99999999999999876544

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.54  E-value=3.2e-14  Score=92.40  Aligned_cols=86  Identities=13%  Similarity=0.046  Sum_probs=59.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|+.||........ ..+..           ..  ..............+.+|+.+||..+
T Consensus       252 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~li~~~l~~~  318 (345)
T 3hko_A          252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN-----------KK--LCFENPNYNVLSPLARDLLSNLLNRN  318 (345)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------CC--CCTTSGGGGGSCHHHHHHHHHHSCSC
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHh-----------cc--cccCCcccccCCHHHHHHHHHHcCCC
Confidence            467899999999999999999999965443222 11110           00  00001111112345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++|+|+....
T Consensus       319 p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          319 VDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             TTTSCCHHHHHHSHHHHTTS
T ss_pred             hhHCCCHHHHhcChhhccCh
Confidence            99999999999999986543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.54  E-value=3.8e-14  Score=92.83  Aligned_cols=100  Identities=13%  Similarity=0.155  Sum_probs=62.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-------HHHHHHHHHHHHhhchHHHhh------hcCC----------cC-
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-------VDLLKNQLQAVITADESARRS------MVDP----------AV-   57 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~----------~~-   57 (127)
                      .++.++||||+|++++||++|..||....       ...+..+....+..+......      ....          .. 
T Consensus       211 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (373)
T 1q8y_A          211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW  290 (373)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccccccc
Confidence            47889999999999999999999986432       222223332222211100000      0000          00 


Q ss_pred             --------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           58 --------NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        58 --------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                              ...........+.+|+.+||..||.+||++.++++|+|+.....
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          291 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             chhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence                    00123455677889999999999999999999999999876543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.54  E-value=1.5e-14  Score=93.53  Aligned_cols=86  Identities=15%  Similarity=0.272  Sum_probs=59.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+.   ..        ........    ....+.+++.+||..+
T Consensus       193 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~--------~~~~~~~~----~~~~~~~li~~~l~~d  257 (325)
T 3kex_A          193 KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE---KG--------ERLAQPQI----CTIDVYMVMVKCWMID  257 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH---TT--------CBCCCCTT----BCTTTTHHHHHHTCSC
T ss_pred             CCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH---cC--------CCCCCCCc----CcHHHHHHHHHHcCCC
Confidence            57789999999999999999 999997554333322221   00        00111111    1123458999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      |.+||++.++++++..+...+.
T Consensus       258 p~~Rps~~el~~~l~~~~~~~~  279 (325)
T 3kex_A          258 ENIRPTFKELANEFTRMARDPP  279 (325)
T ss_dssp             TTTSCCHHHHHHHHHHHTTSHH
T ss_pred             hhhCcCHHHHHHHHHHHHhcch
Confidence            9999999999999987765443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.54  E-value=2.8e-14  Score=93.14  Aligned_cols=99  Identities=16%  Similarity=0.224  Sum_probs=64.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCc---------------ccccHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVN---------------KACLDESL   66 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~   66 (127)
                      ++.++||||+|++++||++|+.||..... .....+...........+.........               ........
T Consensus       209 ~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (360)
T 3e3p_A          209 YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDA  288 (360)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTH
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcccc
Confidence            78899999999999999999999965443 333444433322222222221111000               00001134


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+.+|+.+||..+|.+||++.++++|+|+.....
T Consensus       289 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          289 KEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence            56789999999999999999999999999866433

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.53  E-value=1.5e-13  Score=88.16  Aligned_cols=87  Identities=23%  Similarity=0.379  Sum_probs=59.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||............         .......+......    ...+.+++.+||..+|
T Consensus       179 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp  245 (307)
T 2eva_A          179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW---------AVHNGTRPPLIKNL----PKPIESLMTRCWSKDP  245 (307)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH---------HHHTTCCCCCBTTC----CHHHHHHHHHHTCSSG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH---------HHhcCCCCCccccc----CHHHHHHHHHHhcCCh
Confidence            4788999999999999999999998643221111111         00111112222222    2356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++++..+....
T Consensus       246 ~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          246 SQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             GGSCCHHHHHHHHHHHGGGC
T ss_pred             hhCcCHHHHHHHHHHHHHhc
Confidence            99999999999998776544

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.53  E-value=7.3e-15  Score=97.34  Aligned_cols=97  Identities=20%  Similarity=0.348  Sum_probs=64.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhc----C---CcCcc-----cccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMV----D---PAVNK-----ACLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~-----~~~~~~~~~   68 (127)
                      .|+.++||||+||+++||++|+.||... ....+..++...+......+....    .   +....     .........
T Consensus       218 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (394)
T 4e7w_A          218 NYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPD  297 (394)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHH
Confidence            4788999999999999999999999644 344455555443333322221110    0   00000     011112346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.+|+.+||..+|.+||++.+++.|+|+..
T Consensus       298 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          298 AIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             HHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence            789999999999999999999999999754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.53  E-value=8.1e-15  Score=95.79  Aligned_cols=95  Identities=17%  Similarity=0.166  Sum_probs=58.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcC----------------CcCccc----
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVD----------------PAVNKA----   60 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~----   60 (127)
                      .|+.++||||+||+++||++|+.||...... .+..+.......+.........                +.....    
T Consensus       235 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  314 (360)
T 3llt_A          235 GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSI  314 (360)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHH
T ss_pred             CCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhh
Confidence            5788999999999999999999999654432 2222222211111111111100                000000    


Q ss_pred             ---------ccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 039745           61 ---------CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF   96 (127)
Q Consensus        61 ---------~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~   96 (127)
                               ........+.+|+.+||..||.+||++.++++|.|+
T Consensus       315 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f  359 (360)
T 3llt_A          315 KHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL  359 (360)
T ss_dssp             HHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred             hhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCccc
Confidence                     000001456799999999999999999999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.53  E-value=5.8e-15  Score=95.13  Aligned_cols=101  Identities=27%  Similarity=0.337  Sum_probs=62.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhc-----CCcC----cc--------cccH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMV-----DPAV----NK--------ACLD   63 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~--------~~~~   63 (127)
                      .++.++||||+|++++||++|+.||..... .....+....+.......+...     .+..    ..        ....
T Consensus       185 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (317)
T 2pmi_A          185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKE  264 (317)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccc
Confidence            478899999999999999999999965443 3333333222211110000000     0000    00        0000


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhccc
Q 039745           64 ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        64 ~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      .....+.+|+.+||..||.+||++.++++|+|+......
T Consensus       265 ~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          265 PLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH  303 (317)
T ss_dssp             CCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred             cCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence            112357799999999999999999999999998765544

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.53  E-value=6.2e-15  Score=94.81  Aligned_cols=97  Identities=21%  Similarity=0.311  Sum_probs=60.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcC---------CcCcc----cccHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVD---------PAVNK----ACLDESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~   67 (127)
                      .++.++||||+|+++++|++|+.||... ....+..+.................         .....    ........
T Consensus       196 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (311)
T 3niz_A          196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQ  275 (311)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCH
T ss_pred             CCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCH
Confidence            4788999999999999999999998543 3333333433222221101010000         00000    00011123


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+.+|+.+||..||.+||++.++++|+|+..
T Consensus       276 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  306 (311)
T 3niz_A          276 EGIDLLSNMLCFDPNKRISARDAMNHPYFKD  306 (311)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence            5679999999999999999999999998753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.53  E-value=7.9e-15  Score=96.41  Aligned_cols=98  Identities=20%  Similarity=0.301  Sum_probs=63.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcC----------CcCccc----ccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVD----------PAVNKA----CLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~   66 (127)
                      .|+.++||||+||+++||++|+.||.... ..++..+....+......+..+..          +.....    ......
T Consensus       206 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (367)
T 2fst_X          206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN  285 (367)
T ss_dssp             SCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCC
Confidence            47889999999999999999999996443 344444544333322211111110          000000    001123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..||.+||++.+++.|+|+...
T Consensus       286 ~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence            457799999999999999999999999997654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.53  E-value=7.1e-15  Score=97.59  Aligned_cols=99  Identities=15%  Similarity=0.259  Sum_probs=61.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh----------HHHHHHHHHHHHhhchHHHhhh------------cCCcCcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE----------VDLLKNQLQAVITADESARRSM------------VDPAVNK   59 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~   59 (127)
                      .|+.++||||+||+++||++|+.||....          ..++..++...+.........+            .......
T Consensus       212 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (405)
T 3rgf_A          212 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT  291 (405)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGT
T ss_pred             cccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCC
Confidence            37889999999999999999999985332          2334444433222111000000            0000000


Q ss_pred             cccH---------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           60 ACLD---------ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        60 ~~~~---------~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      ....         .....+.+|+.+||..||.+||++.++++|+||....
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          292 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             TCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             cchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence            0000         0023567999999999999999999999999987643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.53  E-value=1.4e-14  Score=95.00  Aligned_cols=85  Identities=19%  Similarity=0.216  Sum_probs=58.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|+++|+|++|..||...........+.   .       ...  .............+.+|+.+||..+|
T Consensus       206 ~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~---~-------~~~--~~~~~~~~~~~~~~~~li~~~L~~dP  273 (362)
T 2bdw_A          206 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK---A-------GAY--DYPSPEWDTVTPEAKSLIDSMLTVNP  273 (362)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------TCC--CCCTTGGGGSCHHHHHHHHHHSCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---h-------CCC--CCCcccccCCCHHHHHHHHHHcCCCh
Confidence            47889999999999999999999996554433322221   0       000  00111111223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|+|+..
T Consensus       274 ~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          274 KKRITADQALKVPWICN  290 (362)
T ss_dssp             GGSCCHHHHTTSHHHHT
T ss_pred             hhCcCHHHHhcCcccCC
Confidence            99999999999998753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.53  E-value=3.1e-14  Score=90.45  Aligned_cols=83  Identities=17%  Similarity=0.256  Sum_probs=57.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||.............         .............    ...+.+|+.+||..+|
T Consensus       201 ~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~li~~~L~~dP  267 (285)
T 3is5_A          201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT---------YKEPNYAVECRPL----TPQAVDLLKQMLTKDP  267 (285)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---------HCCCCCCC--CCC----CHHHHHHHHHHTCSCT
T ss_pred             CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc---------cCCcccccccCcC----CHHHHHHHHHHccCCh
Confidence            46789999999999999999999997655433322210         0000000000111    2356699999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.++++|.|+.
T Consensus       268 ~~Rps~~e~l~hp~f~  283 (285)
T 3is5_A          268 ERRPSAAQVLHHEWFK  283 (285)
T ss_dssp             TTSCCHHHHHTSGGGG
T ss_pred             hhCcCHHHHhcCHHhh
Confidence            9999999999998864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.53  E-value=3.5e-14  Score=92.32  Aligned_cols=100  Identities=18%  Similarity=0.153  Sum_probs=62.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhh--------------------------cC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSM--------------------------VD   54 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------------------~~   54 (127)
                      .++.++||||+|++++||++|..||....... ...+.......+.......                          ..
T Consensus       215 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (355)
T 2eu9_A          215 GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK  294 (355)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC
T ss_pred             CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCC
Confidence            47889999999999999999999996544322 2222222211111111000                          00


Q ss_pred             CcC-cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           55 PAV-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        55 ~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +.. ...........+.+|+.+||..+|.+||++.++++|.|+....+
T Consensus       295 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             cccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence            000 00011223457789999999999999999999999999865433

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.52  E-value=1.7e-14  Score=92.21  Aligned_cols=83  Identities=19%  Similarity=0.201  Sum_probs=58.9

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|++++|+++|..||...........+   ...         .......+    ...+.+|+.+||..+|.+
T Consensus       191 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i---~~~---------~~~~~~~~----~~~l~~li~~~l~~dp~~  254 (305)
T 2wtk_C          191 GFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI---GKG---------SYAIPGDC----GPPLSDLLKGMLEYEPAK  254 (305)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHC---------CCCCCSSS----CHHHHHHHHHHTCSSTTT
T ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHH---hcC---------CCCCCCcc----CHHHHHHHHHHccCChhh
Confidence            56899999999999999999999755433222211   000         01111122    235669999999999999


Q ss_pred             CCCHHHHHHHHHHhhhccc
Q 039745           84 RPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~~  102 (127)
                      ||++.++++|.|+......
T Consensus       255 Rps~~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          255 RFSIRQIRQHSWFRKKHPP  273 (305)
T ss_dssp             SCCHHHHHHSHHHHSCCCC
T ss_pred             CCCHHHHhcCcccccCCCC
Confidence            9999999999998765443

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.52  E-value=1.2e-14  Score=92.47  Aligned_cols=96  Identities=22%  Similarity=0.318  Sum_probs=59.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh-----cCCcC-------cccccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM-----VDPAV-------NKACLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~~~   68 (127)
                      .++.++||||+|++++||++|..||..... ..+..+............+..     .++..       ...........
T Consensus       177 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (288)
T 1ob3_A          177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES  256 (288)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHH
Confidence            378899999999999999999999965432 333333322221111000000     00000       00011112345


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      +.+|+.+||..||.+||++.++++|.|+.
T Consensus       257 ~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  285 (288)
T 1ob3_A          257 GIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (288)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence            67999999999999999999999999874

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.52  E-value=1.8e-14  Score=91.00  Aligned_cols=88  Identities=15%  Similarity=0.127  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+.   ..         ...............+.+|+.+||..+|
T Consensus       183 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~li~~~l~~dp  250 (277)
T 3f3z_A          183 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIR---EG---------TFTFPEKDWLNVSPQAESLIRRLLTKSP  250 (277)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HC---------CCCCCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hC---------CCCCCchhhhcCCHHHHHHHHHHccCCh
Confidence            46789999999999999999999996554332222110   00         0011110001123466799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|.|+.....
T Consensus       251 ~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          251 KQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             TTSCCHHHHTTSHHHHHHHC
T ss_pred             hhCcCHHHHhcCHHHhcccc
Confidence            99999999999999876544

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.52  E-value=2.7e-14  Score=91.41  Aligned_cols=95  Identities=27%  Similarity=0.447  Sum_probs=63.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++|..||....... ...+......... .+....+.... .........+.+++..||..+
T Consensus       210 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~  287 (307)
T 2nru_A          210 EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK-TIEDYIDKKMN-DADSTSVEAMYSVASQCLHEK  287 (307)
T ss_dssp             EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC-CHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSS
T ss_pred             CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh-hhhhhcccccc-ccchHHHHHHHHHHHHHcCCC
Confidence            35779999999999999999999986433211 1111111111111 22333333332 234556678889999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++++..+.
T Consensus       288 p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          288 KNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             TTTSCCHHHHHHHHHHHC
T ss_pred             cccCcCHHHHHHHHHHHh
Confidence            999999999999987653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.52  E-value=1.9e-14  Score=97.42  Aligned_cols=88  Identities=16%  Similarity=0.202  Sum_probs=61.1

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      |.|+.++||||+|+++|+|++|..||...........+.   .       ....  .....+......+.+|+.+||..+
T Consensus       202 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~-------~~~~--~~~~~~~~~s~~~~~li~~~L~~d  269 (484)
T 3nyv_A          202 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE---K-------GKYT--FELPQWKKVSESAKDLIRKMLTYV  269 (484)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------CCCC--CCSGGGGGSCHHHHHHHHHHTCSS
T ss_pred             CCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---c-------CCCC--CCCcccccCCHHHHHHHHHHCCCC
Confidence            468899999999999999999999997554332222210   0       0000  001111122345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++|+|+....
T Consensus       270 p~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          270 PSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             GGGSCCHHHHHTSHHHHHHT
T ss_pred             hhHCcCHHHHhhChhhcccc
Confidence            99999999999999986543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.52  E-value=8.3e-15  Score=94.81  Aligned_cols=85  Identities=15%  Similarity=0.216  Sum_probs=57.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|+++++|++|..||...........+.   .         ................+.+|+.+||..+|
T Consensus       193 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP  260 (326)
T 2y0a_A          193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS---A---------VNYEFEDEYFSNTSALAKDFIRRLLVKDP  260 (326)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---H---------TCCCCCHHHHTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH---h---------cCCCcCccccccCCHHHHHHHHHHccCCh
Confidence            47789999999999999999999996544322211110   0         00111111111122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|+|+..
T Consensus       261 ~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          261 KKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             GGSCCHHHHHHSTTTSC
T ss_pred             hhCCCHHHHhcCCCccC
Confidence            99999999999998753

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.52  E-value=1e-14  Score=95.73  Aligned_cols=84  Identities=11%  Similarity=0.177  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|+++|+|++|..||...........+.   ..         ...............+.+|+.+||..+|
T Consensus       194 ~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~---~~---------~~~~~~~~~~~~s~~~~~li~~~L~~dP  261 (361)
T 2yab_A          194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT---AV---------SYDFDEEFFSQTSELAKDFIRKLLVKET  261 (361)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---TT---------CCCCCHHHHTTSCHHHHHHHHHHSCSST
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hc---------CCCCCchhccCCCHHHHHHHHHHCCCCh
Confidence            47889999999999999999999996554332221110   00         0001111111123356799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.++++|+|+.
T Consensus       262 ~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          262 RKRLTIQEALRHPWIT  277 (361)
T ss_dssp             TTSCCHHHHHTSTTTS
T ss_pred             hHCcCHHHHhcCcCcC
Confidence            9999999999999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.52  E-value=5.4e-14  Score=89.04  Aligned_cols=88  Identities=19%  Similarity=0.237  Sum_probs=59.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+.   .      .....+.   .........+.+|+.+||..+|
T Consensus       183 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~------~~~~~~~---~~~~~~~~~~~~li~~~l~~dp  250 (284)
T 3kk8_A          183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK---A------GAYDYPS---PEWDTVTPEAKSLIDSMLTVNP  250 (284)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H------TCCCCCT---TTTTTSCHHHHHHHHHHSCSST
T ss_pred             CCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHH---h------ccccCCc---hhhcccCHHHHHHHHHHcccCh
Confidence            46789999999999999999999996554433322221   0      0000010   0011122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|.|+.....
T Consensus       251 ~~Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          251 KKRITADQALKVPWICNRER  270 (284)
T ss_dssp             TTSCCHHHHTTSHHHHSCCC
T ss_pred             hhCCCHHHHhcCccccCChh
Confidence            99999999999999865433

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.52  E-value=1.2e-14  Score=93.34  Aligned_cols=87  Identities=18%  Similarity=0.233  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||........ ....        ..............    ...+.+++.+||..+|
T Consensus       215 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~--------~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp  281 (313)
T 3cek_A          215 KISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KLHA--------IIDPNHEIEFPDIP----EKDLQDVLKCCLKRDP  281 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHH--------HHCTTSCCCCCCCS----CHHHHHHHHHHTCSST
T ss_pred             cCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-HHHH--------HHhcccccCCcccc----hHHHHHHHHHHccCCc
Confidence            467799999999999999999999864321111 1110        00111111111111    2356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|+|+.....
T Consensus       282 ~~Rps~~ell~h~~~~~~~~  301 (313)
T 3cek_A          282 KQRISIPELLAHPYVQIQTH  301 (313)
T ss_dssp             TTSCCHHHHHTSHHHHCC--
T ss_pred             ccCcCHHHHhcCccccCCCC
Confidence            99999999999999865543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.52  E-value=3.6e-14  Score=91.79  Aligned_cols=85  Identities=12%  Similarity=0.245  Sum_probs=60.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |+.||...........+.           ..........    ....+.+++.+||..+
T Consensus       195 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~li~~~l~~~  259 (327)
T 3poz_A          195 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----------KGERLPQPPI----CTIDVYMIMVKCWMID  259 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----------TTCCCCCCTT----BCHHHHHHHHHHTCSC
T ss_pred             CCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH-----------cCCCCCCCcc----CCHHHHHHHHHHcCCC
Confidence            47889999999999999999 999997554443332221           1011111111    2235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.+++.++..+...+
T Consensus       260 p~~Rps~~ell~~l~~~~~~~  280 (327)
T 3poz_A          260 ADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHTSH
T ss_pred             hhhCCCHHHHHHHHHHHHhhh
Confidence            999999999999998766543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.52  E-value=1.7e-14  Score=97.01  Aligned_cols=86  Identities=17%  Similarity=0.257  Sum_probs=59.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|+++++|++|..||...........+.   .       ...  .............+.+|+.+||..||
T Consensus       189 ~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~---~-------~~~--~~~~~~~~~~s~~~~~li~~~L~~dP  256 (444)
T 3soa_A          189 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK---A-------GAY--DFPSPEWDTVTPEAKDLINKMLTINP  256 (444)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---H-------TCC--CCCTTTTTTSCHHHHHHHHHHSCSST
T ss_pred             CCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHH---h-------CCC--CCCccccccCCHHHHHHHHHHcCCCh
Confidence            47889999999999999999999996554433322221   0       000  01111111223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|+|+...
T Consensus       257 ~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          257 SKRITAAEALKHPWISHR  274 (444)
T ss_dssp             TTSCCHHHHHHSCTTHHH
T ss_pred             hHCCCHHHHhcCccccCC
Confidence            999999999999987543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.52  E-value=3.7e-14  Score=96.19  Aligned_cols=87  Identities=16%  Similarity=0.195  Sum_probs=59.8

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      |.|+.++||||+|+++++|++|..||...........+.   .       ....  ............+.+|+.+||..+
T Consensus       197 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~-------~~~~--~~~~~~~~~s~~~~~li~~~L~~d  264 (486)
T 3mwu_A          197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE---T-------GKYA--FDLPQWRTISDDAKDLIRKMLTFH  264 (486)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------TCCC--SCSGGGGGSCHHHHHHHHHHTCSS
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---h-------CCCC--CCCcccCCCCHHHHHHHHHHcCCC
Confidence            457889999999999999999999996544332221110   0       0000  000111122345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++|+|+...
T Consensus       265 p~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          265 PSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             TTTSCCHHHHHHCHHHHHT
T ss_pred             hhhCcCHHHHhcCHhhccC
Confidence            9999999999999998654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.52  E-value=6.9e-15  Score=95.86  Aligned_cols=87  Identities=15%  Similarity=0.214  Sum_probs=57.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.++||||+|++++||++|..||..........+........         .......+......+.+|+.+||..||.
T Consensus       197 ~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~---------~~~~~~~~~~~s~~~~~li~~~L~~dP~  267 (342)
T 2qr7_A          197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK---------FSLSGGYWNSVSDTAKDLVSKMLHVDPH  267 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC---------CCCCSTTTTTSCHHHHHHHHHHTCSSTT
T ss_pred             CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC---------cccCccccccCCHHHHHHHHHHCCCChh
Confidence            4568999999999999999999996432111112221111110         1111111122234567999999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      +||++.++++|+|+..
T Consensus       268 ~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          268 QRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TSCCHHHHTTSHHHHT
T ss_pred             HCcCHHHHhcCCeecC
Confidence            9999999999999854

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.51  E-value=3e-14  Score=93.60  Aligned_cols=87  Identities=22%  Similarity=0.357  Sum_probs=62.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||+++||++ |..||...........+.           ..........+    ...+.+|+.+||..+
T Consensus       262 ~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~-----------~~~~~~~~~~~----~~~l~~li~~~l~~d  326 (367)
T 3l9p_A          262 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-----------SGGRMDPPKNC----PGPVYRIMTQCWQHQ  326 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-----------TTCCCCCCTTC----CHHHHHHHHHHTCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------cCCCCCCCccC----CHHHHHHHHHHcCCC
Confidence            47889999999999999998 999996555433322221           10111111122    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      |.+||++.+++++++.+......
T Consensus       327 P~~Rps~~eil~~l~~~~~~~~~  349 (367)
T 3l9p_A          327 PEDRPNFAIILERIEYCTQDPDV  349 (367)
T ss_dssp             GGGSCCHHHHHHHHHHHHHCHHH
T ss_pred             HhHCcCHHHHHHHHHHHhhChhh
Confidence            99999999999999988775543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.51  E-value=1.7e-14  Score=94.21  Aligned_cols=84  Identities=19%  Similarity=0.291  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|+.||...... ....+.            ....+.....   .....+.+|+.+||..+
T Consensus       229 ~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~------------~~~~~~~~~~---~~~~~l~~li~~~l~~d  293 (348)
T 1u5q_A          229 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA------------QNESPALQSG---HWSEYFRNFVDSCLQKI  293 (348)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH------------HSCCCCCCCT---TSCHHHHHHHHHHTCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH------------hcCCCCCCCC---CCCHHHHHHHHHHcccC
Confidence            4788999999999999999999998644322 121111            0011111111   11235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++|+|+....
T Consensus       294 P~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          294 PQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             GGGSCCHHHHTTCHHHHSCC
T ss_pred             hhhCcCHHHHhhChhhhccC
Confidence            99999999999999986543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=1.1e-14  Score=94.06  Aligned_cols=86  Identities=13%  Similarity=0.207  Sum_probs=58.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|+++++|++|..||...........+.   ..       .  ..............+.+|+.+||..+|.
T Consensus       180 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~-------~--~~~~~~~~~~~s~~~~~li~~~L~~dp~  247 (321)
T 1tki_A          180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM---NA-------E--YTFDEEAFKEISIEAMDFVDRLLVKERK  247 (321)
T ss_dssp             ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HT-------C--CCCCHHHHTTSCHHHHHHHHTTSCSSGG
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH---cC-------C--CCCChhhhccCCHHHHHHHHHHcCCChh
Confidence            5789999999999999999999996544332221110   00       0  0000000111234567999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhc
Q 039745           83 ERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~  100 (127)
                      +||++.++++|+|+....
T Consensus       248 ~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          248 SRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             GSCCHHHHHHSHHHHSCG
T ss_pred             HCcCHHHHhcChhhccCc
Confidence            999999999999986543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.51  E-value=1.2e-14  Score=95.88  Aligned_cols=98  Identities=19%  Similarity=0.274  Sum_probs=65.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhchHHHhhhcC-------CcCccc-----ccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSR-KEVDLLKNQLQAVITADESARRSMVD-------PAVNKA-----CLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~   68 (127)
                      .|+.++||||+||+++||++|+.||.. .....+..++...+......+.....       +.....     ........
T Consensus       218 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (383)
T 3eb0_A          218 EYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL  297 (383)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHH
T ss_pred             CCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHH
Confidence            378899999999999999999999964 34455555554444333322221110       111000     11112345


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +.+|+.+||..+|.+||++.++++|.|+...
T Consensus       298 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          298 AIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence            7799999999999999999999999998543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.51  E-value=3.3e-14  Score=96.62  Aligned_cols=86  Identities=14%  Similarity=0.208  Sum_probs=60.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++++|++|..||...........+.   ..       .  ..............+.+|+.+||..+|
T Consensus       213 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~-------~--~~~~~~~~~~~s~~~~~li~~~L~~dp  280 (494)
T 3lij_A          213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE---KG-------K--YTFDSPEWKNVSEGAKDLIKQMLQFDS  280 (494)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HT-------C--CCCCSGGGTTSCHHHHHHHHHHTCSST
T ss_pred             cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hC-------C--CCCCchhcccCCHHHHHHHHHHCCCCh
Confidence            57889999999999999999999997554433222221   00       0  000111111223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|+|+...
T Consensus       281 ~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          281 QRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             TTSCCHHHHHTCHHHHHH
T ss_pred             hhCccHHHHhcCcccccC
Confidence            999999999999998654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.51  E-value=3e-14  Score=91.30  Aligned_cols=97  Identities=19%  Similarity=0.262  Sum_probs=59.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhh---------hcCCcCcccc-----cHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRS---------MVDPAVNKAC-----LDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-----~~~~~   66 (127)
                      .++.++||||+|++++++++|..||..... .....+........+.....         ...+......     .....
T Consensus       179 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (311)
T 4agu_A          179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNIS  258 (311)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCC
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhccccc
Confidence            468899999999999999999999965433 22222222211111100000         0000000000     01123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ..+.+|+.+||..+|.+||++.++++|+|+..
T Consensus       259 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  290 (311)
T 4agu_A          259 YPALGLLKGCLHMDPTERLTCEQLLHHPYFEN  290 (311)
T ss_dssp             HHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence            35779999999999999999999999999754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.51  E-value=6.7e-14  Score=90.39  Aligned_cols=97  Identities=14%  Similarity=0.179  Sum_probs=61.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhh--------------------------cC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSM--------------------------VD   54 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------------------------~~   54 (127)
                      .++.++||||+|++++|+++|..||........ ..+.......+.......                          ..
T Consensus       210 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (339)
T 1z57_A          210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK  289 (339)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCc
Confidence            478899999999999999999999965443322 222221111111110000                          00


Q ss_pred             CcC-cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           55 PAV-NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        55 ~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.. ...........+.+|+.+||..+|.+||++.++++|.|+..
T Consensus       290 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             chhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence            000 00112234567889999999999999999999999998753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.51  E-value=3.8e-14  Score=89.94  Aligned_cols=85  Identities=21%  Similarity=0.345  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++++++|..||.....  .......           ... .+....   ......+.+|+.+||..
T Consensus       189 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----------~~~-~~~~~~---~~~~~~~~~li~~~l~~  253 (290)
T 3fme_A          189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV-----------EEP-SPQLPA---DKFSAEFVDFTSQCLKK  253 (290)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH-----------HSC-CCCCCT---TTSCHHHHHHHHHHTCS
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh-----------ccC-CCCccc---ccCCHHHHHHHHHHhhc
Confidence            367799999999999999999999964222  2111111           011 111111   11223567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.++++|+|+.....
T Consensus       254 ~p~~Rpt~~e~l~hp~f~~~~~  275 (290)
T 3fme_A          254 NSKERPTYPELMQHPFFTLHES  275 (290)
T ss_dssp             SGGGSCCHHHHTTSHHHHHHHH
T ss_pred             ChhhCcCHHHHHhCcccccCcc
Confidence            9999999999999999876544

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.51  E-value=2.6e-14  Score=92.31  Aligned_cols=97  Identities=14%  Similarity=0.163  Sum_probs=59.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhch-HHHhhh---cCCc----------------Ccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSR--KEVDLLKNQLQAVITADE-SARRSM---VDPA----------------VNK   59 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~--~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~----------------~~~   59 (127)
                      .++.++||||+|++++||++|+.||..  .....+..+......... ..+...   .++.                ...
T Consensus       207 ~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (330)
T 3nsz_A          207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS  286 (330)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCT
T ss_pred             cCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccc
Confidence            478899999999999999999999842  222333322221111100 000000   0000                000


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        60 ~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .........+.+|+.+||..+|.+||++.++++|+|+..
T Consensus       287 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          287 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             TTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence            001112346779999999999999999999999999754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.51  E-value=1.2e-14  Score=92.39  Aligned_cols=84  Identities=21%  Similarity=0.410  Sum_probs=56.9

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.++.++||||+|+++++|++|..||... .........   ..       ..........    ....+.+|+.+||..
T Consensus       204 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~-------~~~~~~~~~~----~~~~l~~li~~~l~~  269 (290)
T 1t4h_A          204 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TS-------GVKPASFDKV----AIPEVKEIIEGCIRQ  269 (290)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TT-------TCCCGGGGGC----CCHHHHHHHHHHSCS
T ss_pred             ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHH---hc-------cCCccccCCC----CCHHHHHHHHHHccC
Confidence            35788999999999999999999998643 222221111   00       0011111111    123567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|.+||++.++++|+|+..
T Consensus       270 dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          270 NKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             SGGGSCCHHHHHTSGGGC-
T ss_pred             ChhhCCCHHHHhhCccccc
Confidence            9999999999999998743

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.51  E-value=8.1e-14  Score=89.99  Aligned_cols=85  Identities=18%  Similarity=0.346  Sum_probs=59.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||...........+           .....+....  .......+.+++.+||..+|
T Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          217 LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-----------RDSPPPKLKN--SHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHSSCCCCTT--GGGSCHHHHHHHHHHSCSST
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------hcCCCCCcCc--cccCCHHHHHHHHHHccCCh
Confidence            4678999999999999999999998654432221111           1111111111  11122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|+|+...
T Consensus       284 ~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          284 QERATAQELLDHPFLLQT  301 (321)
T ss_dssp             TTSCCHHHHHTSGGGGGC
T ss_pred             hhCcCHHHHhcChhhccC
Confidence            999999999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.51  E-value=3.9e-15  Score=95.46  Aligned_cols=98  Identities=17%  Similarity=0.200  Sum_probs=59.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh-------cCCcCc---ccccHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM-------VDPAVN---KACLDESLKTMM   70 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~~   70 (127)
                      .++.++||||+|++++||++|+.||..... .....+............+..       ..+...   ..........+.
T Consensus       195 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (308)
T 3g33_A          195 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGA  274 (308)
T ss_dssp             CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHH
Confidence            578899999999999999999999965443 333333322221111000000       000000   000011234667


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|+.+||..||.+||++.++++|.|+...
T Consensus       275 ~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          275 QLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             HHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            99999999999999999999999987543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.50  E-value=4e-14  Score=92.49  Aligned_cols=84  Identities=18%  Similarity=0.256  Sum_probs=58.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|+++++|++|..||..........+..    .       ..  .............+.+|+.+||..+|
T Consensus       209 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~----~-------~~--~~~~~~~~~~s~~~~~li~~~L~~dP  275 (351)
T 3c0i_A          209 PYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK----G-------KY--KMNPRQWSHISESAKDLVRRMLMLDP  275 (351)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHH----T-------CC--CCCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             CCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHc----C-------CC--CCCccccccCCHHHHHHHHHHCCCCh
Confidence            47889999999999999999999997544322222210    0       00  00000001123456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|.|+..
T Consensus       276 ~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          276 AERITVYEALNHPWLKE  292 (351)
T ss_dssp             TTSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHhcChhhcC
Confidence            99999999999999754

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.50  E-value=2e-13  Score=89.79  Aligned_cols=100  Identities=17%  Similarity=0.205  Sum_probs=62.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhh-------hc--CCcC-------------c
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRS-------MV--DPAV-------------N   58 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~--~~~~-------------~   58 (127)
                      .|+.++||||+|++++||++|+.||..... .....+........+.....       ..  .+..             .
T Consensus       202 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (371)
T 2xrw_A          202 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLF  281 (371)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGS
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccC
Confidence            478899999999999999999999965432 22222221111111100000       00  0000             0


Q ss_pred             ---ccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           59 ---KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        59 ---~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                         ..........+.+|+.+||..||.+||++.++++|+|+.....
T Consensus       282 ~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~  327 (371)
T 2xrw_A          282 PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYD  327 (371)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             cccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcC
Confidence               0011223457889999999999999999999999999865433

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.50  E-value=3.4e-14  Score=90.07  Aligned_cols=84  Identities=17%  Similarity=0.248  Sum_probs=59.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++|+||+|++++++++|..||...........+   ..         .........    ...+.+++.+||..+|
T Consensus       188 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~---------~~~~~~~~~----~~~~~~li~~~l~~~p  251 (284)
T 2vgo_A          188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI---VN---------VDLKFPPFL----SDGSKDLISKLLRYHP  251 (284)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HT---------TCCCCCTTS----CHHHHHHHHHHSCSSG
T ss_pred             CCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHH---hc---------cccCCCCcC----CHHHHHHHHHHhhcCH
Confidence            4678999999999999999999999654433222111   00         111111112    2356699999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|.|+.....
T Consensus       252 ~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          252 PQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             GGSCCHHHHHTCHHHHHHCC
T ss_pred             hhCCCHHHHhhCHHHHhhcc
Confidence            99999999999999875543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.50  E-value=1.9e-14  Score=92.89  Aligned_cols=96  Identities=25%  Similarity=0.402  Sum_probs=65.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH--HHHHHHHHhh-chHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL--KNQLQAVITA-DESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      .++.++||||+|+++++|++|..||........  .....+.... .........+..............+.+++..||.
T Consensus       211 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  290 (326)
T 3uim_A          211 KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ  290 (326)
T ss_dssp             EECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTC
T ss_pred             CCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhC
Confidence            357789999999999999999999863211000  0001111110 0112233444444555667778889999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHh
Q 039745           79 KNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~   97 (127)
                      .+|.+||++.+++++++..
T Consensus       291 ~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          291 SSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             SCGGGSCCHHHHHHHHHTS
T ss_pred             cCCccCCCHHHHHHHhcCc
Confidence            9999999999999999853

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.50  E-value=2.9e-14  Score=93.92  Aligned_cols=85  Identities=15%  Similarity=0.146  Sum_probs=58.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|..||...... .+..+..           ...  .............+.+|+.+||..+
T Consensus       264 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~-----------~~~--~~~~~~~~~~~~~~~~li~~~L~~d  330 (373)
T 2x4f_A          264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA-----------CRW--DLEDEEFQDISEEAKEFISKLLIKE  330 (373)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-----------TCC--CSCSGGGTTSCHHHHHHHHTTSCSS
T ss_pred             CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------ccC--CCChhhhccCCHHHHHHHHHHcCCC
Confidence            3677999999999999999999999654432 2222221           000  0001111112345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++|+|+...
T Consensus       331 p~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          331 KSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             GGGSCCHHHHHHSHHHHCH
T ss_pred             hhhCCCHHHHhcCcCcCCC
Confidence            9999999999999998654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.50  E-value=6.3e-14  Score=92.36  Aligned_cols=96  Identities=11%  Similarity=0.101  Sum_probs=62.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-------HHHHHHHHHHHHhhchHHHh------hhcCC----------cC-
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-------VDLLKNQLQAVITADESARR------SMVDP----------AV-   57 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~~----------~~-   57 (127)
                      .|+.++||||+||+++||++|+.||....       ...+..+....+..+.....      .....          .. 
T Consensus       269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (397)
T 1wak_A          269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW  348 (397)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence            47889999999999999999999985322       22333333322222211100      00000          00 


Q ss_pred             --------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           58 --------NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        58 --------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                              ...........+.+|+.+||..+|.+||++.++++|+|+.
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                    0012345566788999999999999999999999999864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.50  E-value=1.5e-14  Score=93.02  Aligned_cols=80  Identities=19%  Similarity=0.183  Sum_probs=54.5

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      |.++.++||||+|++++|+++|..++......  ..+.               ...............+.+|+.+||..+
T Consensus       230 ~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~~---------------~~~~~~~~~~~~~~~l~~li~~~L~~d  292 (311)
T 3p1a_A          230 GSYGTAADVFSLGLTILEVACNMELPHGGEGW--QQLR---------------QGYLPPEFTAGLSSELRSVLVMMLEPD  292 (311)
T ss_dssp             TCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH--HHHT---------------TTCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCccHH--HHHh---------------ccCCCcccccCCCHHHHHHHHHHcCCC
Confidence            35788999999999999999997665432211  1110               000001111112346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.++++|+|+.
T Consensus       293 P~~Rpt~~ell~hp~~~  309 (311)
T 3p1a_A          293 PKLRATAEALLALPVLR  309 (311)
T ss_dssp             TTTSCCHHHHHTSGGGS
T ss_pred             hhhCcCHHHHHhCcccc
Confidence            99999999999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.50  E-value=4.9e-14  Score=91.06  Aligned_cols=100  Identities=20%  Similarity=0.228  Sum_probs=62.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh---------cCCcCccc----ccHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM---------VDPAVNKA----CLDESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~----~~~~~~~   67 (127)
                      .++.++||||+|+++++|++|+.||..... ..+..+............+..         ..+.....    .......
T Consensus       177 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (324)
T 3mtl_A          177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDS  256 (324)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCH
Confidence            368899999999999999999999965443 333333322222111111110         00000000    0011223


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+.+|+.+||..||.+||++.++++|+|+.....
T Consensus       257 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          257 DGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             HHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            5679999999999999999999999999876543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.50  E-value=5.2e-14  Score=94.76  Aligned_cols=34  Identities=21%  Similarity=0.286  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ...+.+|+.+||..||.+|+++.++++|+|+..-
T Consensus       370 s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          370 SADAIHLLKRMLVFNPNKRITINECLAHPFFKEV  403 (458)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             CHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence            3467799999999999999999999999998654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.50  E-value=2.5e-14  Score=93.93  Aligned_cols=84  Identities=19%  Similarity=0.322  Sum_probs=56.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||...........+.   ..       ...  ............+.+|+.+||..+|
T Consensus       281 ~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~---~~-------~~~--~~~~~~~~~~~~~~~li~~~L~~dP  348 (365)
T 2y7j_A          281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM---EG-------QYQ--FSSPEWDDRSSTVKDLISRLLQVDP  348 (365)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HT-------CCC--CCHHHHSSSCHHHHHHHHHHSCSST
T ss_pred             CCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hC-------CCC--CCCcccccCCHHHHHHHHHHcCCCh
Confidence            36789999999999999999999996544332222110   00       000  0000001112356799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.++++|+|+.
T Consensus       349 ~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          349 EARLTAEQALQHPFFE  364 (365)
T ss_dssp             TTSCCHHHHHHSGGGC
T ss_pred             hHCcCHHHHhcCcccC
Confidence            9999999999999863

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.50  E-value=1.9e-14  Score=93.11  Aligned_cols=85  Identities=13%  Similarity=0.173  Sum_probs=58.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|+++++|++|+.||...........+.        ..........    .......+.+|+.+||..+|
T Consensus       209 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~--------~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP  276 (327)
T 3lm5_A          209 PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS--------QVNVDYSEET----FSSVSQLATDFIQSLLVKNP  276 (327)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--------HTCCCCCTTT----TTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH--------hcccccCchh----hcccCHHHHHHHHHHcCCCh
Confidence            46789999999999999999999996554332221110        0000011111    11223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|.|+..
T Consensus       277 ~~Rpt~~~ll~h~~~~~  293 (327)
T 3lm5_A          277 EKRPTAEICLSHSWLQQ  293 (327)
T ss_dssp             GGSCCHHHHTTCGGGCC
T ss_pred             hhCcCHHHHhCCHhhcc
Confidence            99999999999999744

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.50  E-value=4.7e-14  Score=90.90  Aligned_cols=89  Identities=17%  Similarity=0.231  Sum_probs=59.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+.           ..........    ....+.+|+.+||..+
T Consensus       215 ~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~l~~li~~~l~~d  279 (323)
T 3qup_A          215 LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI-----------GGNRLKQPPE----CMEEVYDLMYQCWSAD  279 (323)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----------TTCCCCCCTT----CCHHHHHHHHHTTCSS
T ss_pred             CCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh-----------cCCCCCCCCc----cCHHHHHHHHHHccCC
Confidence            46789999999999999999 899986544332222210           0001111112    2235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcccccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQDAWH  105 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~~~~  105 (127)
                      |.+||++.++++.+..+........
T Consensus       280 p~~Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          280 PKQRPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             GGGSCCHHHHHHHHHHHHHC-----
T ss_pred             hhhCcCHHHHHHHHHHHHHHhhhcC
Confidence            9999999999998888777665443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.50  E-value=1.4e-14  Score=93.80  Aligned_cols=97  Identities=16%  Similarity=0.220  Sum_probs=60.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhc--------CCcCcccc-----cHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMV--------DPAVNKAC-----LDESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-----~~~~~~   67 (127)
                      .++.++||||+|++++||++|..||.... ...+..+............+...        .+......     ......
T Consensus       214 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (329)
T 3gbz_A          214 HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDD  293 (329)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCH
Confidence            37889999999999999999999996443 33333333222111110000000        00000000     001224


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+.+|+.+||..||.+||++.++++|+||..
T Consensus       294 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  324 (329)
T 3gbz_A          294 EGLDLLTAMLEMDPVKRISAKNALEHPYFSH  324 (329)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence            6679999999999999999999999998754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.50  E-value=7.1e-14  Score=88.77  Aligned_cols=87  Identities=16%  Similarity=0.181  Sum_probs=59.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      |.++.++||||+|++++++++|..||...........+.   .       ........  ........+.+++.+||..+
T Consensus       197 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~-------~~~~~~~~--~~~~~~~~~~~li~~~l~~d  264 (287)
T 2wei_A          197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE---T-------GKYAFDLP--QWRTISDDAKDLIRKMLTFH  264 (287)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------CCCCCCSG--GGTTSCHHHHHHHHHHTCSS
T ss_pred             CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH---c-------CCCCCCch--hhhhcCHHHHHHHHHHcccC
Confidence            357789999999999999999999986544332221110   0       00000000  00112235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++|+|+...
T Consensus       265 p~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          265 PSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             GGGSCCHHHHHHSHHHHHH
T ss_pred             hhhCcCHHHHhcCHHHhcc
Confidence            9999999999999997654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.49  E-value=5.3e-14  Score=92.79  Aligned_cols=89  Identities=18%  Similarity=0.311  Sum_probs=62.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+           ...........+    ...+.+|+.+||..+
T Consensus       269 ~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~d  333 (382)
T 3tt0_A          269 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-----------KEGHRMDKPSNC----TNELYMMMRDCWHAV  333 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-----------HTTCCCCCCSSC----CHHHHHHHHHHTCSS
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----------HcCCCCCCCccC----CHHHHHHHHHHcCCC
Confidence            46789999999999999999 99998655543332222           111111112222    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcccccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQDAWH  105 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~~~~  105 (127)
                      |.+||++.++++++..+........
T Consensus       334 P~~Rps~~ell~~L~~~~~~~~~~~  358 (382)
T 3tt0_A          334 PSQRPTFKQLVEDLDRIVALTSNQE  358 (382)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred             hhhCcCHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999998876554433

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.49  E-value=1.6e-13  Score=88.93  Aligned_cols=87  Identities=15%  Similarity=0.300  Sum_probs=60.4

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+   .        .........    .....+.+++.+||..+
T Consensus       226 ~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~---~--------~~~~~~~~~----~~~~~l~~li~~~l~~~  290 (333)
T 1mqb_A          226 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---N--------DGFRLPTPM----DCPSAIYQLMMQCWQQE  290 (333)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---H--------TTCCCCCCT----TCBHHHHHHHHHHTCSS
T ss_pred             CCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH---H--------CCCcCCCcc----cCCHHHHHHHHHHcCCC
Confidence            46788999999999999998 99998654433222111   0        001111111    12335679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      |.+||++.+++.++..+......
T Consensus       291 p~~Rps~~~l~~~L~~~~~~~~~  313 (333)
T 1mqb_A          291 RARRPKFADIVSILDKLIRAPDS  313 (333)
T ss_dssp             TTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             hhhCcCHHHHHHHHHHHHhcchh
Confidence            99999999999999877665443

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.49  E-value=3.2e-14  Score=90.63  Aligned_cols=87  Identities=6%  Similarity=-0.054  Sum_probs=57.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh---H-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE---V-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      .++.++||||+|++++||++|+.||....   . .....+.........   ...     .    ......+.+++..||
T Consensus       194 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~----~~~~~~l~~li~~~l  261 (298)
T 1csn_A          194 EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL---REL-----C----AGFPEEFYKYMHYAR  261 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH---HHH-----T----TTSCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH---HHH-----H----hhCcHHHHHHHHHHh
Confidence            36789999999999999999999986422   1 111111110000000   000     0    012235679999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhhc
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      ..+|.+||++.++++.+..+...
T Consensus       262 ~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          262 NLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCCcccCCCHHHHHHHHHHHHHh
Confidence            99999999999999988876543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.49  E-value=1.3e-14  Score=94.11  Aligned_cols=81  Identities=16%  Similarity=0.270  Sum_probs=58.2

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|++++||++|+.||...........+.   .       .  ....+...    ...+.+|+.+||..+|.+
T Consensus       192 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~---~-------~--~~~~p~~~----s~~~~~li~~~L~~dP~~  255 (328)
T 3fe3_A          192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL---R-------G--KYRIPFYM----STDCENLLKRFLVLNPIK  255 (328)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------C--CCCCCTTS----CHHHHHHHHHHCCSSTTT
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH---h-------C--CCCCCCCC----CHHHHHHHHHHCCCChhH
Confidence            468999999999999999999997665443332221   0       0  01111111    235669999999999999


Q ss_pred             CCCHHHHHHHHHHhhhc
Q 039745           84 RPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~  100 (127)
                      ||++.++++|.|+....
T Consensus       256 R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          256 RGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             SCCHHHHTTCTTTTTTC
T ss_pred             CcCHHHHhcCHhhcCCC
Confidence            99999999999976543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.49  E-value=1.7e-13  Score=89.40  Aligned_cols=98  Identities=15%  Similarity=0.219  Sum_probs=62.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh-----------cCCcC---cccccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM-----------VDPAV---NKACLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~   66 (127)
                      .++.++||||+|+++++|++|..||..... ..+..+....+.........+           .....   .........
T Consensus       200 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (353)
T 3coi_A          200 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRAS  279 (353)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcC
Confidence            467899999999999999999999964433 333333322221111111000           00000   001111233


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..+|.+||++.+++.|.|+...
T Consensus       280 ~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          280 PQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            467799999999999999999999999997643

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.49  E-value=5.7e-14  Score=89.87  Aligned_cols=86  Identities=16%  Similarity=0.240  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+.   ...     .......    .......+.+|+.+||..+|
T Consensus       183 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~---~~~-----~~~~~~~----~~~~~~~~~~li~~~l~~dp  250 (304)
T 2jam_A          183 PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIK---EGY-----YEFESPF----WDDISESAKDFICHLLEKDP  250 (304)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HCC-----CCCCTTT----TTTSCHHHHHHHHHHHCSST
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---cCC-----CCCCccc----cccCCHHHHHHHHHHcCCCh
Confidence            46789999999999999999999986544332221110   000     0001111    11123456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|+|+...
T Consensus       251 ~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          251 NERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             TTSCCHHHHHTSHHHHSS
T ss_pred             hHCcCHHHHhcCccccCC
Confidence            999999999999998643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.49  E-value=3.1e-14  Score=99.39  Aligned_cols=84  Identities=11%  Similarity=0.166  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|..||..........+......         .....+...+    ..+.+|+.+||..||
T Consensus       367 ~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~---------~~~~~p~~~S----~~a~dLI~~lL~~dP  433 (689)
T 3v5w_A          367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---------MAVELPDSFS----PELRSLLEGLLQRDV  433 (689)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH---------CCCCCCTTSC----HHHHHHHHHHTCSCG
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC---------CCCCCCccCC----HHHHHHHHHHccCCH
Confidence            488999999999999999999999965432222222211111         1122222222    356799999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|++     +.++++|+||..
T Consensus       434 ~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          434 NRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             GGCTTCSSSTHHHHTTSGGGTT
T ss_pred             hHCCCCCCCCHHHHhcCccccC
Confidence            99998     699999999754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.49  E-value=6e-14  Score=90.81  Aligned_cols=86  Identities=10%  Similarity=0.225  Sum_probs=61.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+|++++|+++ |..||...........+.           ..........    ....+.+|+.+||..+
T Consensus       195 ~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~l~~li~~~l~~d  259 (327)
T 3lzb_A          195 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----------KGERLPQPPI----CTIDVYMIMRKCWMID  259 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----------TTCCCCCCTT----BCHHHHHHHHHHTCSS
T ss_pred             CCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----------cCCCCCCCcc----CCHHHHHHHHHHcCCC
Confidence            47789999999999999999 999997555443332221           1111111111    2235678999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      |.+||++.+++..+..+...+.
T Consensus       260 p~~Rps~~ell~~L~~~~~~~~  281 (327)
T 3lzb_A          260 ADSRPKFRELIIEFSKMARDPQ  281 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHTSHH
T ss_pred             hhHCcCHHHHHHHHHHHHhCcC
Confidence            9999999999999988775443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.49  E-value=9e-14  Score=91.12  Aligned_cols=98  Identities=20%  Similarity=0.286  Sum_probs=63.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcC------------CcCc--ccccHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVD------------PAVN--KACLDESLK   67 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~--~~~~~~~~~   67 (127)
                      ++.++||||+|++++||++|+.||... ....+..+.................            ....  .........
T Consensus       209 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (364)
T 3qyz_A          209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS  288 (364)
T ss_dssp             CSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCH
T ss_pred             CCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCH
Confidence            688999999999999999999999543 3344444443333322211111100            0000  000011234


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+.+|+.+||..+|.+||++.++++|+|+....
T Consensus       289 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          289 KALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            577999999999999999999999999986653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.49  E-value=5.4e-15  Score=94.53  Aligned_cols=92  Identities=12%  Similarity=0.178  Sum_probs=57.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|++++||++|..||............      .. .. ..................+.+|+.+||..+|
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~------~~-~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  245 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM------KT-RI-RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP  245 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS------CC-SS-CTTCCSSCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH------HH-HH-hhccccCCchhcccCCHHHHHHHHHHcccCh
Confidence            4678999999999999999999998643322110000      00 00 0000001100001123467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|+|+.....
T Consensus       246 ~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          246 TQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             TTSCCHHHHHTSHHHHTGGG
T ss_pred             hhCCCHHHHhcChhhccccc
Confidence            99999999999999876543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.49  E-value=4.1e-14  Score=96.36  Aligned_cols=88  Identities=14%  Similarity=0.145  Sum_probs=60.6

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      +.|+.++||||+|+++++|++|..||...........+.   ..         ........+......+.+|+.+||..+
T Consensus       222 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~---------~~~~~~~~~~~~s~~~~~li~~~L~~d  289 (504)
T 3q5i_A          222 KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE---KG---------KYYFDFNDWKNISDEAKELIKLMLTYD  289 (504)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HC---------CCCCCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred             cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---cC---------CCCCCccccCCCCHHHHHHHHHHcCCC
Confidence            357889999999999999999999997554433222221   00         000000001112245779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++|+|+....
T Consensus       290 p~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          290 YNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             TTTSCCHHHHHTSHHHHHTC
T ss_pred             hhHCCCHHHHhcCHhhhhch
Confidence            99999999999999986543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.49  E-value=7.9e-15  Score=94.77  Aligned_cols=100  Identities=14%  Similarity=0.172  Sum_probs=56.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++++++|..||..........................................+.+|+.+||..+|.
T Consensus       207 ~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~  286 (327)
T 3lxl_A          207 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQ  286 (327)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             CChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChh
Confidence            46789999999999999999999864433221111000000000001111101111111122234677999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhccc
Q 039745           83 ERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      +||++.++++++..+.....
T Consensus       287 ~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          287 DRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             GSCCHHHHHHHHHHC-----
T ss_pred             hCcCHHHHHHHHHHHHhhhc
Confidence            99999999999987655443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.49  E-value=1.3e-14  Score=96.34  Aligned_cols=86  Identities=14%  Similarity=0.230  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH----HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL----LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      .|+.++||||+||++|||++|..||.......    ....+.         ......+   ..........+.+|+.+||
T Consensus       239 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---------~~~~~~~---~~~~~~~s~~~~~li~~~L  306 (400)
T 1nxk_A          239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---------MGQYEFP---NPEWSEVSEEVKMLIRNLL  306 (400)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---------HTCCCCC---TTTTTTSCHHHHHHHHTTS
T ss_pred             CCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---------cCcccCC---CcccccCCHHHHHHHHHHC
Confidence            57889999999999999999999985433211    111110         0000001   1011122345679999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhh
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+|.+||++.++++|+|+...
T Consensus       307 ~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          307 KTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             CSSGGGSCCHHHHHHSHHHHTT
T ss_pred             CCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999998654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.48  E-value=6.2e-14  Score=92.22  Aligned_cols=85  Identities=16%  Similarity=0.278  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+|+++|||++ |..||...........+.           ....+....    .....+.+++.+||..+
T Consensus       281 ~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~l~~li~~~l~~d  345 (370)
T 2psq_A          281 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK-----------EGHRMDKPA----NCTNELYMMMRDCWHAV  345 (370)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-----------TTCCCCCCT----TSCHHHHHHHHHHTCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-----------cCCCCCCCC----CCCHHHHHHHHHHcCCC
Confidence            47889999999999999999 999986544433322220           111111211    22335679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.++++++..+....
T Consensus       346 P~~Rpt~~ell~~L~~il~~~  366 (370)
T 2psq_A          346 PSQRPTFKQLVEDLDRILTLT  366 (370)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHHHh
Confidence            999999999999998876543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.48  E-value=3.2e-14  Score=90.82  Aligned_cols=80  Identities=15%  Similarity=0.255  Sum_probs=55.7

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|++++||++|..||...........+.          ............    ...+.+|+.+||..+|.+
T Consensus       218 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----------~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~  283 (298)
T 2zv2_A          218 GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIK----------SQALEFPDQPDI----AEDLKDLITRMLDKNPES  283 (298)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----------HCCCCCCSSSCC----CHHHHHHHHHHTCSCTTT
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHh----------cccCCCCCcccc----CHHHHHHHHHHhhcChhh
Confidence            567899999999999999999997554332222110          000110111111    235679999999999999


Q ss_pred             CCCHHHHHHHHHHh
Q 039745           84 RPSVEDVLWNLQFA   97 (127)
Q Consensus        84 Rp~~~~~~~~~~~~   97 (127)
                      ||++.++++|+|+.
T Consensus       284 R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          284 RIVVPEIKLHPWVT  297 (298)
T ss_dssp             SCCHHHHTTCHHHH
T ss_pred             CCCHHHHhcCcccc
Confidence            99999999999874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.48  E-value=4.7e-14  Score=90.91  Aligned_cols=97  Identities=22%  Similarity=0.280  Sum_probs=60.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhc----------CCcCcccccHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMV----------DPAVNKACLDESLKTMM   70 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~   70 (127)
                      .++.++||||+|++++++++|+.||.... ......+................          ...............+.
T Consensus       195 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 1blx_A          195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGK  274 (326)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHH
Confidence            47889999999999999999999996543 33333333222111110100000          00000111112234567


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|+.+||..+|.+||++.+++.|.|+..
T Consensus       275 ~li~~~L~~dP~~Rpt~~e~l~hp~~~~  302 (326)
T 1blx_A          275 DLLLKCLTFNPAKRISAYSALSHPYFQD  302 (326)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHcCCCcccCCCHHHHhcCccccc
Confidence            9999999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.48  E-value=1.4e-13  Score=88.50  Aligned_cols=85  Identities=16%  Similarity=0.228  Sum_probs=58.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++|+++|+.||.............  .        ..........    ....+.+|+.+||..+|
T Consensus       215 ~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~--~--------~~~~~~~~~~----~~~~l~~li~~~l~~dP  280 (309)
T 3p86_A          215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG--F--------KCKRLEIPRN----LNPQVAAIIEGCWTNEP  280 (309)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH--H--------SCCCCCCCTT----SCHHHHHHHHHHTCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--h--------cCCCCCCCcc----CCHHHHHHHHHHccCCh
Confidence            36789999999999999999999997554432222110  0        0011111222    22356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++.+..+...
T Consensus       281 ~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          281 WKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             GGSCCHHHHHHHHHHHHC-
T ss_pred             hhCcCHHHHHHHHHHHHHh
Confidence            9999999999988766543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.48  E-value=3.1e-14  Score=91.32  Aligned_cols=79  Identities=22%  Similarity=0.324  Sum_probs=52.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++   ||..... ....+.         ....   ...+ ...........+|+.+||..||
T Consensus       206 ~y~~~~DiwSlGvilyell~---Pf~~~~~-~~~~~~---------~~~~---~~~p-~~~~~~~~~~~~li~~~L~~dP  268 (299)
T 4g31_A          206 SYSHKVDIFSLGLILFELLY---PFSTQME-RVRTLT---------DVRN---LKFP-PLFTQKYPCEYVMVQDMLSPSP  268 (299)
T ss_dssp             CCCTHHHHHHHHHHHHHHHS---CCSSHHH-HHHHHH---------HHHT---TCCC-HHHHHHCHHHHHHHHHHTCSSG
T ss_pred             CCCCHHHHHHHHHHHHHHcc---CCCCccH-HHHHHH---------HHhc---CCCC-CCCcccCHHHHHHHHHHcCCCh
Confidence            58899999999999999996   6643221 111111         1111   1111 1112223345689999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.++++|.|+.
T Consensus       269 ~~Rps~~eil~h~~~~  284 (299)
T 4g31_A          269 MERPEAINIIENAVFE  284 (299)
T ss_dssp             GGSCCHHHHHTSGGGC
T ss_pred             hHCcCHHHHhcCHhhC
Confidence            9999999999998863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.48  E-value=4.2e-14  Score=89.53  Aligned_cols=86  Identities=15%  Similarity=0.207  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+.   .         ................+.+|+.+||..+|
T Consensus       187 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~~li~~~l~~dp  254 (283)
T 3bhy_A          187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS---A---------VNYDFDEEYFSNTSELAKDFIRRLLVKDP  254 (283)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---T---------TCCCCCHHHHTTCCHHHHHHHHTTSCSSG
T ss_pred             CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhH---h---------cccCCcchhcccCCHHHHHHHHHHccCCH
Confidence            46789999999999999999999986544332211110   0         00001100011122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.++...
T Consensus       255 ~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          255 KRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             GGSCCHHHHHHCHHHHHH
T ss_pred             hHCcCHHHHHhCHHHHHH
Confidence            999999999999987553

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.48  E-value=1.1e-13  Score=92.85  Aligned_cols=84  Identities=19%  Similarity=0.277  Sum_probs=59.3

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhc-CCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMV-DPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+||+++||++ |..||....... ..+.           .... .+.............+.+|+.+||..
T Consensus       215 ~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~~i~-----------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  282 (434)
T 2rio_A          215 RLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-SNII-----------RGIFSLDEMKCLHDRSLIAEATDLISQMIDH  282 (434)
T ss_dssp             CCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-HHHH-----------HTCCCCCCCTTCCCHHHHHHHHHHHHHHTCS
T ss_pred             CcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-HHHh-----------cCCCCcccccccccccchHHHHHHHHHHhhC
Confidence            47889999999999999998 899986443222 1111           0111 11111112344556788999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|.+||++.++++|+++.
T Consensus       283 dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          283 DPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             SGGGSCCHHHHHTSGGGS
T ss_pred             ChhhCCCHHHHHhCCccC
Confidence            999999999999999874

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.48  E-value=7.3e-14  Score=87.90  Aligned_cols=80  Identities=15%  Similarity=0.291  Sum_probs=55.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|+.||............          ...........    .....+.+++.+||..+|
T Consensus       190 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~~~~~li~~~l~~~p  255 (271)
T 3dtc_A          190 MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV----------AMNKLALPIPS----TCPEPFAKLMEDCWNPDP  255 (271)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH----------HTSCCCCCCCT----TCCHHHHHHHHHHTCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh----------hcCCCCCCCCc----ccCHHHHHHHHHHhcCCc
Confidence            4678999999999999999999999654432221111          00111111112    223457799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.++++++.
T Consensus       256 ~~Rps~~e~l~~L~  269 (271)
T 3dtc_A          256 HSRPSFTNILDQLT  269 (271)
T ss_dssp             GGSCCHHHHHHHHH
T ss_pred             ccCcCHHHHHHHHh
Confidence            99999999999886

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.48  E-value=4e-14  Score=91.29  Aligned_cols=84  Identities=11%  Similarity=0.173  Sum_probs=57.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|+++++|++|..||...........+   ...         ...............+.+|+.+||..+|
T Consensus       194 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i---~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~dp  261 (321)
T 2a2a_A          194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI---TSV---------SYDFDEEFFSHTSELAKDFIRKLLVKET  261 (321)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH---HTT---------CCCCCHHHHTTCCHHHHHHHHTTSCSST
T ss_pred             CCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---Hhc---------ccccChhhhcccCHHHHHHHHHHcCCCh
Confidence            4678999999999999999999999654433221111   000         0001000001122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.++++|+|+.
T Consensus       262 ~~Rps~~e~l~hp~~~  277 (321)
T 2a2a_A          262 RKRLTIQEALRHPWIT  277 (321)
T ss_dssp             TTSCCHHHHHHSTTTS
T ss_pred             hhCcCHHHHhcCcccc
Confidence            9999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.47  E-value=5.1e-14  Score=91.75  Aligned_cols=97  Identities=16%  Similarity=0.165  Sum_probs=60.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCC---------cCcccccHH------HH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDP---------AVNKACLDE------SL   66 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~------~~   66 (127)
                      |+.++||||+|++++||++|..||....... ...+............+.....         .........      ..
T Consensus       206 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (351)
T 3mi9_A          206 YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD  285 (351)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCC
T ss_pred             CCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCC
Confidence            6889999999999999999999996554332 2333322221111000000000         000000000      02


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..||.+||++.++++|.|+...
T Consensus       286 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          286 PYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             hHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence            347799999999999999999999999998654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.47  E-value=1.7e-13  Score=90.08  Aligned_cols=98  Identities=16%  Similarity=0.251  Sum_probs=62.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhh-----------cCCcCcc---cccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSM-----------VDPAVNK---ACLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~   66 (127)
                      .++.++||||+|+++++|++|+.||.... ...+..+..............+           .......   .......
T Consensus       218 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (371)
T 4exu_A          218 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRAS  297 (371)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSC
T ss_pred             CCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccC
Confidence            47889999999999999999999996544 3333333332222211111100           0000000   0011123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..+|.+||++.++++|+|+...
T Consensus       298 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          298 PQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            467799999999999999999999999998643

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.47  E-value=2.9e-13  Score=87.16  Aligned_cols=97  Identities=10%  Similarity=0.025  Sum_probs=60.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh--HHHHHHHHHHHHhhchHHHhhhc-----------CCcCcccccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVITADESARRSMV-----------DPAVNKACLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~   68 (127)
                      .++.++||||+|++++||++|..||....  ......+.......+......+.           ...............
T Consensus       199 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (319)
T 4euu_A          199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL  278 (319)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHH
Confidence            46789999999999999999999984221  11111111111111110000000           001111234566677


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.+++.+||..||.+||++.++++|+....
T Consensus       279 l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          279 LTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             HHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             hHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            889999999999999999999999997543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.47  E-value=4.7e-14  Score=92.93  Aligned_cols=83  Identities=16%  Similarity=0.296  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+|+++||+++ |..||...........+.           .......+..    ....+.+|+..||..+
T Consensus       291 ~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~l~~li~~cl~~d  355 (377)
T 3cbl_A          291 RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-----------KGGRLPCPEL----CPDAVFRLMEQCWAYE  355 (377)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH-----------TTCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------cCCCCCCCCC----CCHHHHHHHHHHcCCC
Confidence            35678999999999999998 999986554433322221           1011111112    2335679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++.+..+..
T Consensus       356 P~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          356 PGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             chhCcCHHHHHHHHHHHHh
Confidence            9999999999998876543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.47  E-value=1.1e-13  Score=90.54  Aligned_cols=100  Identities=21%  Similarity=0.284  Sum_probs=60.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhch----------------------------HHHhhhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADE----------------------------SARRSMV   53 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~   53 (127)
                      .++.++||||+|+++++|++|+.||....................                            .......
T Consensus       206 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (360)
T 3eqc_A          206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIV  285 (360)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHh
Confidence            467899999999999999999999965544333222110000000                            0000000


Q ss_pred             CCcCcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           54 DPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ...............+.+|+.+||..+|.+||++.++++|+|+.....
T Consensus       286 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  333 (360)
T 3eqc_A          286 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  333 (360)
T ss_dssp             HSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             ccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence            000000000112235779999999999999999999999999876543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.47  E-value=1.8e-14  Score=92.56  Aligned_cols=88  Identities=13%  Similarity=0.160  Sum_probs=55.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHH------------HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDL------------LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMM   70 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (127)
                      ++.++||||+|++++||++|+.||.......            ...+......       .  ...............+.
T Consensus       203 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------~--~~~~~~~~~~~~~~~~~  273 (316)
T 2ac3_A          203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE-------G--KYEFPDKDWAHISCAAK  273 (316)
T ss_dssp             HTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHH-------C--CCCCCHHHHTTSCHHHH
T ss_pred             CCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhc-------c--CcccCchhcccCCHHHH
Confidence            5678999999999999999999985432100            0011100000       0  01111000011234577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|+.+||..||.+||++.++++|+|+...
T Consensus       274 ~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          274 DLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             HHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            99999999999999999999999997543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.47  E-value=1.7e-14  Score=93.40  Aligned_cols=98  Identities=17%  Similarity=0.347  Sum_probs=62.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHH---------HhhhcCCcCcccc-----cHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESA---------RRSMVDPAVNKAC-----LDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-----~~~~~   66 (127)
                      .++.++||||+|+++++|++|+.||.... ......+........+..         ......+......     .....
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (331)
T 4aaa_A          201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS  280 (331)
T ss_dssp             TCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSC
T ss_pred             CcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchh
Confidence            46789999999999999999999996443 333333332222111100         0001111111100     11223


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+.+|+.+||..+|.+||++.++++|.|+...
T Consensus       281 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          281 EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            467899999999999999999999999998654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.47  E-value=1.3e-13  Score=86.77  Aligned_cols=83  Identities=16%  Similarity=0.346  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++ |..||...........+           ............    ...+.+++.+||..+
T Consensus       183 ~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~~~~li~~~l~~~  247 (269)
T 4hcu_A          183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-----------STGFRLYKPRLA----STHVYQIMNHCWRER  247 (269)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-----------HTTCCCCCCTTS----CHHHHHHHHHHTCSS
T ss_pred             CCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-----------hcCccCCCCCcC----CHHHHHHHHHHccCC
Confidence            46789999999999999999 89998655443322211           111111111112    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++++..+..
T Consensus       248 p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          248 PEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             cccCcCHHHHHHHHHHHHH
Confidence            9999999999999987654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.47  E-value=2.7e-14  Score=94.54  Aligned_cols=86  Identities=13%  Similarity=0.087  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||...........+.        ......++...    ......+.+|+.+||..+|
T Consensus       226 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~--------~~~~~~~~~~~----~~~s~~~~~li~~~L~~dP  293 (387)
T 1kob_A          226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK--------RCDWEFDEDAF----SSVSPEAKDFIKNLLQKEP  293 (387)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH--------HCCCCCCSSTT----TTSCHHHHHHHHTTSCSSG
T ss_pred             CCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHH--------hCCCCCCcccc----ccCCHHHHHHHHHHcCCCh
Confidence            36789999999999999999999996544322211110        00000111111    1223356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.|+...
T Consensus       294 ~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          294 RKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             GGSCCHHHHHTSTTTSSC
T ss_pred             hHCcCHHHHhhCccccCC
Confidence            999999999999987543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.47  E-value=1.9e-14  Score=93.47  Aligned_cols=90  Identities=12%  Similarity=0.198  Sum_probs=54.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++++++|..||................     .....   .............+.+|+.+||..+|.
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~  277 (336)
T 3fhr_A          206 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI-----RLGQY---GFPNPEWSEVSEDAKQLIRLLLKTDPT  277 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCCC-----------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhh-----hcccc---ccCchhhccCCHHHHHHHHHHCCCChh
Confidence            4568999999999999999999985433222111000000     00000   011111112234567999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhc
Q 039745           83 ERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~  100 (127)
                      +||++.++++|+|+....
T Consensus       278 ~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          278 ERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             GSCCHHHHHHSHHHHTGG
T ss_pred             HCcCHHHHhcCccccccc
Confidence            999999999999987654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.47  E-value=3.6e-14  Score=93.09  Aligned_cols=85  Identities=15%  Similarity=0.215  Sum_probs=54.4

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            6 KIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         6 ~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      ++||||+|+++++|++|+.||..... ......+.....        .. .....  .......+.+|+.+||..+|.+|
T Consensus       198 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~--------~~-~~~~~--~~~~s~~~~~li~~~L~~dP~~R  266 (361)
T 3uc3_A          198 IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS--------VK-YSIPD--DIRISPECCHLISRIFVADPATR  266 (361)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHT--------TC-CCCCT--TSCCCHHHHHHHHHHSCSCTTTS
T ss_pred             eeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhc--------CC-CCCCC--cCCCCHHHHHHHHHHccCChhHC
Confidence            48999999999999999999964322 111111111100        00 00100  00112356799999999999999


Q ss_pred             CCHHHHHHHHHHhhhcc
Q 039745           85 PSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        85 p~~~~~~~~~~~~~~~~  101 (127)
                      |++.++++|.|+.....
T Consensus       267 ps~~ell~hp~f~~~~~  283 (361)
T 3uc3_A          267 ISIPEIKTHSWFLKNLP  283 (361)
T ss_dssp             CCHHHHHTSHHHHTTCC
T ss_pred             cCHHHHHhCcchhcCCc
Confidence            99999999999976544

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.47  E-value=1.2e-13  Score=89.15  Aligned_cols=87  Identities=22%  Similarity=0.355  Sum_probs=61.3

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|+++++|++ |..||...........+   .        ..........+    ...+.+++.+||..+
T Consensus       221 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~---~--------~~~~~~~~~~~----~~~l~~li~~~l~~d  285 (327)
T 2yfx_A          221 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV---T--------SGGRMDPPKNC----PGPVYRIMTQCWQHQ  285 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH---H--------TTCCCCCCTTC----CHHHHHHHHHHTCSS
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH---h--------cCCCCCCCCCC----CHHHHHHHHHHhcCC
Confidence            47789999999999999998 88898654433222221   0        00111111122    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      |.+||++.+++++++........
T Consensus       286 p~~Rps~~~ll~~l~~~~~~~~~  308 (327)
T 2yfx_A          286 PEDRPNFAIILERIEYCTQDPDV  308 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHHCHHH
T ss_pred             hhhCcCHHHHHHHHHHHhcCHHH
Confidence            99999999999999988765543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.47  E-value=4.7e-14  Score=91.80  Aligned_cols=81  Identities=15%  Similarity=0.246  Sum_probs=58.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+|++++||++|..||...........+.   .         .....+...    ...+.+|+.+||..+|
T Consensus       181 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~---------~~~~~p~~~----s~~~~~li~~lL~~dP  244 (337)
T 1o6l_A          181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL---M---------EEIRFPRTL----SPEAKSLLAGLLKKDP  244 (337)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H---------CCCCCCTTS----CHHHHHHHHHHTCSST
T ss_pred             CCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH---c---------CCCCCCCCC----CHHHHHHHHHHhhcCH
Confidence            47889999999999999999999996555433322220   0         011122222    2356699999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+|+     ++.++++|.||..
T Consensus       245 ~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          245 KQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             TTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHhcCCCCCCHHHHHcCCCcCC
Confidence            9999     8999999999743

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.47  E-value=2.5e-14  Score=91.04  Aligned_cols=96  Identities=24%  Similarity=0.247  Sum_probs=58.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCC-Cchh-HHHHHHHHHHHHhhchHHHhhhc---C--C-------cCcccccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLK-SRKE-VDLLKNQLQAVITADESARRSMV---D--P-------AVNKACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~--~-------~~~~~~~~~~~~~   68 (127)
                      ++.++||||+|++++||++|..|+ .... ...+..+................   +  +       .............
T Consensus       179 ~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (292)
T 3o0g_A          179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNAT  258 (292)
T ss_dssp             CCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHH
T ss_pred             cCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChH
Confidence            788999999999999999887775 3333 23333333222221111110000   0  0       0000011122345


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.+|+.+||..||.+||++.++++|+|+..
T Consensus       259 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          259 GRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence            679999999999999999999999999754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.46  E-value=1.1e-13  Score=87.91  Aligned_cols=87  Identities=9%  Similarity=0.143  Sum_probs=61.0

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++|+++ |..||...........+           .....+.....    ....+.+++..||..+|
T Consensus       190 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i-----------~~~~~~~~~~~----~~~~l~~li~~~l~~~p  254 (287)
T 1u59_A          190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-----------EQGKRMECPPE----CPPELYALMSDCWIYKW  254 (287)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH-----------HTTCCCCCCTT----CCHHHHHHHHHTTCSSG
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-----------hcCCcCCCCCC----cCHHHHHHHHHHcCCCh
Confidence            5678999999999999998 99998654433222221           01111112222    23467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhccccc
Q 039745           82 AERPSVEDVLWNLQFAAQVQDAW  104 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~~~~  104 (127)
                      .+||++.+++++++.+.......
T Consensus       255 ~~Rps~~~l~~~l~~~~~~~~~~  277 (287)
T 1u59_A          255 EDRPDFLTVEQRMRACYYSLASK  277 (287)
T ss_dssp             GGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             hhCcCHHHHHHHHHHHHHhcCCc
Confidence            99999999999999877655443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.46  E-value=1.8e-14  Score=95.12  Aligned_cols=98  Identities=19%  Similarity=0.296  Sum_probs=56.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHh----h---chHHH-------------hhhc---CCc-
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVIT----A---DESAR-------------RSMV---DPA-   56 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~----~---~~~~~-------------~~~~---~~~-   56 (127)
                      .|+.++||||+||+++||++|+.||..... ............    .   .....             ....   .+. 
T Consensus       213 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (389)
T 3gni_B          213 GYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRP  292 (389)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------------
T ss_pred             CCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCcccc
Confidence            478899999999999999999999854321 111111100000    0   00000             0000   000 


Q ss_pred             -----CcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           57 -----VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        57 -----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                           ............+.+|+.+||..||.+||++.++++|+|+...
T Consensus       293 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~  340 (389)
T 3gni_B          293 SNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  340 (389)
T ss_dssp             -------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred             ccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence                 0000111223467899999999999999999999999998653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.46  E-value=3.1e-14  Score=89.92  Aligned_cols=84  Identities=21%  Similarity=0.227  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+.           ....+.....+    ...+.+++.+||..+|
T Consensus       192 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~-----------~~~~~~~~~~~----~~~l~~li~~~l~~~p  256 (279)
T 2w5a_A          192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR-----------EGKFRRIPYRY----SDELNEIITRMLNLKD  256 (279)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----------HTCCCCCCTTS----CHHHHHHHHHHTCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHh-----------hcccccCCccc----CHHHHHHHHHHcCCCc
Confidence            46788999999999999999999997554332222110           10111122122    2356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++++++....
T Consensus       257 ~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          257 YHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             GGSCCHHHHHTSTTCCGGG
T ss_pred             ccCCCHHHHHhChhhhhhc
Confidence            9999999999998865543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.46  E-value=1.3e-13  Score=92.68  Aligned_cols=82  Identities=15%  Similarity=0.235  Sum_probs=59.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|++++||++|+.||...........+.         .   .....+...    ...+.+|+.+||..+|
T Consensus       325 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---------~---~~~~~p~~~----~~~~~~li~~~L~~dP  388 (446)
T 4ejn_A          325 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---------M---EEIRFPRTL----GPEAKSLLSGLLKKDP  388 (446)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---------H---CCCCCCTTS----CHHHHHHHHHHTCSST
T ss_pred             CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH---------h---CCCCCCccC----CHHHHHHHHHHcccCH
Confidence            57889999999999999999999996555443322220         0   011111222    2356799999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhhh
Q 039745           82 AERP-----SVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~~   99 (127)
                      .+||     ++.++++|+|+..-
T Consensus       389 ~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          389 KQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             TTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHhCCCCCCCHHHHHhCccccCC
Confidence            9999     99999999998643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.46  E-value=3.6e-14  Score=90.27  Aligned_cols=88  Identities=9%  Similarity=0.040  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH----HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      .++.++||||+|++++||++|+.||.....    .....+.........    ....    ..    ....+.+++..||
T Consensus       191 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~----~~~~l~~li~~~l  258 (296)
T 3uzp_A          191 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI----EVLC----KG----YPSEFATYLNFCR  258 (296)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----HHHT----TT----SCHHHHHHHHHHH
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----HHHH----hh----CCHHHHHHHHHHH
Confidence            467799999999999999999999864221    111111111111110    0000    11    1235679999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+|.+||++.++++.+..+....
T Consensus       259 ~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          259 SLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             TSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hcCcCcCCCHHHHHHHHHHHHHhc
Confidence            999999999999999888765543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.46  E-value=6.3e-14  Score=91.50  Aligned_cols=86  Identities=12%  Similarity=0.164  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|..||....... ....+   ...       .  ..............+.+|+.+||..+
T Consensus       226 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i---~~~-------~--~~~~~~~~~~~~~~~~~li~~~L~~d  293 (349)
T 2w4o_A          226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRI---LNC-------E--YYFISPWWDEVSLNAKDLVRKLIVLD  293 (349)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHH---HTT-------C--CCCCTTTTTTSCHHHHHHHHTTSCSS
T ss_pred             CCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHH---HhC-------C--CccCCchhhhCCHHHHHHHHHHccCC
Confidence            47889999999999999999999985443221 11111   000       0  00011111122345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++|.|+...
T Consensus       294 P~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          294 PKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             GGGSCCHHHHHHSTTTTST
T ss_pred             hhhCcCHHHHhcCcccCCC
Confidence            9999999999999987543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.46  E-value=6.2e-14  Score=89.34  Aligned_cols=87  Identities=18%  Similarity=0.307  Sum_probs=59.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+.   .       ..  ..............+.+|+.+||..+|
T Consensus       205 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~-------~~--~~~~~~~~~~~~~~l~~li~~~l~~dp  272 (298)
T 1phk_A          205 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM---S-------GN--YQFGSPEWDDYSDTVKDLVSRFLVVQP  272 (298)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------TC--CCCCTTTGGGSCHHHHHHHHHHCCSSG
T ss_pred             cCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHh---c-------CC--cccCcccccccCHHHHHHHHHHccCCc
Confidence            36779999999999999999999986544332222210   0       00  000001111223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++|.|+....
T Consensus       273 ~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          273 QKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             GGSCCHHHHTTSGGGCTTC
T ss_pred             ccCCCHHHHHhChHhhhcc
Confidence            9999999999999876543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.46  E-value=1.7e-13  Score=87.09  Aligned_cols=84  Identities=15%  Similarity=0.255  Sum_probs=56.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|+++++|++|+.||............ .        ......+......    ...+.+|+.+||..+|.
T Consensus       202 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~--------~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~  268 (295)
T 2clq_A          202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-V--------GMFKVHPEIPESM----SAEAKAFILKCFEPDPD  268 (295)
T ss_dssp             CSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH-H--------HHHCCCCCCCTTS----CHHHHHHHHHTTCSSTT
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh-h--------ccccccccccccC----CHHHHHHHHHHccCChh
Confidence            677899999999999999999998543222111111 0        0001112222222    23566899999999999


Q ss_pred             CCCCHHHHHHHHHHhhh
Q 039745           83 ERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~   99 (127)
                      +||++.+++.|.++...
T Consensus       269 ~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          269 KRACANDLLVDEFLKVS  285 (295)
T ss_dssp             TSCCHHHHHTSGGGCC-
T ss_pred             hCCCHHHHhcChhhhhc
Confidence            99999999999987543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.46  E-value=3.5e-14  Score=95.10  Aligned_cols=98  Identities=16%  Similarity=0.138  Sum_probs=59.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCC-----------CCCch------------------hHHHHHHHHHHHHhhchHHHhhh
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRP-----------LKSRK------------------EVDLLKNQLQAVITADESARRSM   52 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~-----------p~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~   52 (127)
                      .|+.++||||+||+++||++|..           +|...                  ...++..+....+.+....+...
T Consensus       228 ~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~  307 (432)
T 3n9x_A          228 NYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNI  307 (432)
T ss_dssp             CCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhc
Confidence            47889999999999999997433           33221                  13344444444333332221111


Q ss_pred             cC-----------CcCcc---cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           53 VD-----------PAVNK---ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        53 ~~-----------~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..           .....   .........+.+|+.+||..||.+||++.++++|+|+..-
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  368 (432)
T 3n9x_A          308 NKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV  368 (432)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred             cCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence            10           00000   0001123467799999999999999999999999997654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.46  E-value=6.2e-14  Score=88.05  Aligned_cols=80  Identities=14%  Similarity=0.243  Sum_probs=55.6

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      .++||||+|++++|+++|+.||............          ......+......    ...+.+++.+||..+|.+|
T Consensus       190 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~R  255 (271)
T 3kmu_A          190 RSADMWSFAVLLWELVTREVPFADLSNMEIGMKV----------ALEGLRPTIPPGI----SPHVSKLMKICMNEDPAKR  255 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH----------HHSCCCCCCCTTC----CHHHHHHHHHHTCSSGGGS
T ss_pred             chhhHHHHHHHHHHHHhCCCCccccChHHHHHHH----------HhcCCCCCCCCCC----CHHHHHHHHHHcCCChhhC
Confidence            3799999999999999999999654433221111          1111112222222    3356799999999999999


Q ss_pred             CCHHHHHHHHHHhh
Q 039745           85 PSVEDVLWNLQFAA   98 (127)
Q Consensus        85 p~~~~~~~~~~~~~   98 (127)
                      |++.++++.+..+.
T Consensus       256 ps~~~il~~L~~l~  269 (271)
T 3kmu_A          256 PKFDMIVPILEKMQ  269 (271)
T ss_dssp             CCHHHHHHHHHHHC
T ss_pred             cCHHHHHHHHHHhh
Confidence            99999999887653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.46  E-value=2.4e-13  Score=89.49  Aligned_cols=85  Identities=14%  Similarity=0.248  Sum_probs=58.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |+.||...........+   ..       . ......    ......+.+++..||..+
T Consensus       226 ~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i---~~-------~-~~~~~~----~~~~~~l~~li~~cl~~d  290 (373)
T 2qol_A          226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---DE-------G-YRLPPP----MDCPAALYQLMLDCWQKD  290 (373)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHH---HT-------T-EECCCC----TTCBHHHHHHHHHHTCSS
T ss_pred             CcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc-------C-CCCCCC----ccccHHHHHHHHHHhCcC
Confidence            47789999999999999998 99998654433222221   00       0 001111    122345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.++++.+..+....
T Consensus       291 p~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          291 RNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             GGGSCCHHHHHHHHHHHHHCG
T ss_pred             hhhCcCHHHHHHHHHHHHhCc
Confidence            999999999999998776544

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.45  E-value=1.1e-13  Score=89.45  Aligned_cols=87  Identities=13%  Similarity=0.257  Sum_probs=60.3

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+           ..........    .....+.+|+..||..+
T Consensus       230 ~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~l~~li~~~l~~d  294 (325)
T 3kul_A          230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-----------EEGYRLPAPM----GCPHALHQLMLDCWHKD  294 (325)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-----------HTTCCCCCCT----TCCHHHHHHHHHHTCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-----------HcCCCCCCCC----CcCHHHHHHHHHHccCC
Confidence            35678999999999999999 99998654433222211           1111111111    22345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      |.+||++.++++.+..+......
T Consensus       295 p~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          295 RAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             GGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             hhhCcCHHHHHHHHHHHHhCccc
Confidence            99999999999999887765443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.45  E-value=4.9e-14  Score=89.41  Aligned_cols=81  Identities=22%  Similarity=0.379  Sum_probs=55.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++|+++|+.||..............        ......+.....+    ...+.+++.+||..+|.
T Consensus       205 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~--------~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~  272 (287)
T 4f0f_A          205 YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI--------REEGLRPTIPEDC----PPRLRNVIELCWSGDPK  272 (287)
T ss_dssp             ECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH--------HHSCCCCCCCTTS----CHHHHHHHHHHTCSSGG
T ss_pred             cCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH--------hccCCCCCCCccc----CHHHHHHHHHHhcCChh
Confidence            56789999999999999999999964433222111110        0111112222222    34567999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQ   95 (127)
Q Consensus        83 ~Rp~~~~~~~~~~   95 (127)
                      +||++.++++.+.
T Consensus       273 ~Rps~~~ll~~L~  285 (287)
T 4f0f_A          273 KRPHFSYIVKELS  285 (287)
T ss_dssp             GSCCHHHHHHHHH
T ss_pred             hCcCHHHHHHHHH
Confidence            9999999998875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.45  E-value=1e-13  Score=89.65  Aligned_cols=85  Identities=11%  Similarity=0.163  Sum_probs=56.5

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|+++++|++|+.||............ ..        .........    ......+.+|+.+||..+|.+
T Consensus       186 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-~~--------~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~  252 (323)
T 3tki_A          186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WK--------EKKTYLNPW----KKIDSAPLALLHKILVENPSA  252 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH-HH--------TTCTTSTTG----GGSCHHHHHHHHHHSCSSTTT
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-Hh--------cccccCCcc----ccCCHHHHHHHHHHccCChhh
Confidence            56799999999999999999999643322111100 00        000000111    112235568999999999999


Q ss_pred             CCCHHHHHHHHHHhhhcc
Q 039745           84 RPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~  101 (127)
                      ||++.++++|.|+.....
T Consensus       253 R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          253 RITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             SCCHHHHTTCTTTTCCCC
T ss_pred             CcCHHHHhhChhhccccc
Confidence            999999999999865443

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.45  E-value=3.4e-14  Score=90.32  Aligned_cols=88  Identities=8%  Similarity=0.025  Sum_probs=57.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH----HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      .++.++||||+|++++|+++|+.||.....    .....+.........    .....    .    ....+.+|+..||
T Consensus       191 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~----~~~~l~~li~~~l  258 (296)
T 4hgt_A          191 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI----EVLCK----G----YPSEFATYLNFCR  258 (296)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----HHHTT----T----SCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh----hhhhc----c----CCHHHHHHHHHHH
Confidence            467799999999999999999999854221    111111111111000    00000    1    1235679999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+|.+||++.++++.+..+....
T Consensus       259 ~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          259 SLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             TSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999887765533

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.45  E-value=8.1e-15  Score=96.51  Aligned_cols=77  Identities=9%  Similarity=0.016  Sum_probs=53.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|++++||++|+.||........              .......  ....    ...+.+|+.+||..+|
T Consensus       289 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~--------------~~~~~~~--~~~~----~~~~~~li~~~L~~dp  348 (377)
T 3byv_A          289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGG--------------SEWIFRS--CKNI----PQPVRALLEGFLRYPK  348 (377)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCCC------CC--------------SGGGGSS--CCCC----CHHHHHHHHHHTCSSG
T ss_pred             cCChhhhHHHHHHHHHHHHHCCCCCcccccccc--------------hhhhhhh--ccCC----CHHHHHHHHHHcCCCc
Confidence            478899999999999999999999853321110              0001110  0111    2356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|.|+..
T Consensus       349 ~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          349 EDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             GGCCCHHHHHTSHHHHH
T ss_pred             hhCCCHHHHhhChHHHH
Confidence            99999999999999754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.45  E-value=6.5e-14  Score=94.30  Aligned_cols=84  Identities=23%  Similarity=0.351  Sum_probs=58.8

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||++++||++ |+.||...........+.           .-.....+.    .....+.+|+.+||..
T Consensus       360 ~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-----------~~~~~~~~~----~~~~~l~~li~~cl~~  424 (454)
T 1qcf_A          360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-----------RGYRMPRPE----NCPEELYNIMMRCWKN  424 (454)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-----------HTCCCCCCT----TSCHHHHHHHHHHTCS
T ss_pred             CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------cCCCCCCCC----CCCHHHHHHHHHHccC
Confidence            357889999999999999999 999996544332222221           001111111    2234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.+++..+..+..
T Consensus       425 dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          425 RPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             SGGGSCCHHHHHHHHHTSSS
T ss_pred             ChhHCcCHHHHHHHHHHHHh
Confidence            99999999999998876543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.45  E-value=6.5e-15  Score=96.76  Aligned_cols=92  Identities=8%  Similarity=-0.042  Sum_probs=58.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|++++||++|+.||..........+.     ..  .....................+.+|+.+||..+|
T Consensus       269 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  341 (371)
T 3q60_A          269 TFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWK-----RP--SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR  341 (371)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCC-----BC--CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred             CcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchh-----hh--hhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence            3788999999999999999999998654321110000     00  0000000111101111223467799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++|+|+..-.
T Consensus       342 ~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          342 RRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             TTCCCHHHHTTSHHHHHHH
T ss_pred             hhCCCHHHHhcCHHHHHHH
Confidence            9999999999999986543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.45  E-value=1.9e-13  Score=86.51  Aligned_cols=83  Identities=19%  Similarity=0.280  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++ |+.||...........+           ............    ...+.+++.+||..+
T Consensus       197 ~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~~  261 (283)
T 3gen_A          197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----------AQGLRLYRPHLA----SEKVYTIMYSCWHEK  261 (283)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-----------HTTCCCCCCTTC----CHHHHHHHHHTTCSS
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH-----------hcccCCCCCCcC----CHHHHHHHHHHccCC
Confidence            46789999999999999998 99998755443322222           111111111112    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++.++..+..
T Consensus       262 p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          262 ADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHhh
Confidence            9999999999999987654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.45  E-value=7.3e-14  Score=90.07  Aligned_cols=84  Identities=19%  Similarity=0.272  Sum_probs=57.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+           .....+.....   .....+.+|+.+||..+|
T Consensus       210 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~---~~~~~l~~li~~~l~~dp  275 (326)
T 2x7f_A          210 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-----------PRNPAPRLKSK---KWSKKFQSFIESCLVKNH  275 (326)
T ss_dssp             -CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHSCCCCCSCS---CSCHHHHHHHHHHCCSSG
T ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh-----------hcCccccCCcc---ccCHHHHHHHHHHhccCh
Confidence            4678999999999999999999998654432211111           01111111111   112356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.|+...
T Consensus       276 ~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          276 SQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             GGSCCHHHHHTSHHHHCC
T ss_pred             hhCCCHHHHhhChHHhhC
Confidence            999999999999997643

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.45  E-value=6.5e-14  Score=88.34  Aligned_cols=82  Identities=16%  Similarity=0.275  Sum_probs=58.2

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++|+||+|++++++++|..||...........+.   .       .  ........    ...+.+++.+||..+|.+
T Consensus       189 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~-------~--~~~~~~~~----~~~l~~li~~~l~~~p~~  252 (276)
T 2h6d_A          189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR---G-------G--VFYIPEYL----NRSVATLLMHMLQVDPLK  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------C--CCCCCTTS----CHHHHHHHHHHTCSSGGG
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh---c-------C--cccCchhc----CHHHHHHHHHHccCChhh
Confidence            468999999999999999999997554433222210   0       0  01111111    235668999999999999


Q ss_pred             CCCHHHHHHHHHHhhhcc
Q 039745           84 RPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~  101 (127)
                      ||++.++++|.|+....+
T Consensus       253 Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          253 RATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             SCCHHHHHHSHHHHTTCC
T ss_pred             CCCHHHHHhChhhccCch
Confidence            999999999999876544

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.45  E-value=2.4e-13  Score=86.78  Aligned_cols=84  Identities=19%  Similarity=0.211  Sum_probs=57.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|+++++|++|..||............  .         ....+...  ........+.+++.+||..+|
T Consensus       198 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~---------~~~~~~~~--~~~~~~~~l~~li~~~l~~dp  264 (302)
T 2j7t_A          198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI--A---------KSDPPTLL--TPSKWSVEFRDFLKIALDKNP  264 (302)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH--H---------HSCCCCCS--SGGGSCHHHHHHHHHHSCSCT
T ss_pred             CCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH--h---------ccCCcccC--CccccCHHHHHHHHHHcccCh
Confidence            4678999999999999999999998654432221111  0         00011110  011122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|.|+..
T Consensus       265 ~~Rps~~~ll~h~~~~~  281 (302)
T 2j7t_A          265 ETRPSAAQLLEHPFVSS  281 (302)
T ss_dssp             TTSCCHHHHTTSTTTTT
T ss_pred             hhCCCHHHHhcChHHhh
Confidence            99999999999988643

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.45  E-value=1.5e-13  Score=88.68  Aligned_cols=96  Identities=14%  Similarity=0.120  Sum_probs=57.3

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHh-hchHHH-----hhhcCCcCcccc-cHHHHHHHHHHHHHh
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVIT-ADESAR-----RSMVDPAVNKAC-LDESLKTMMEVCVRC   76 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~l~~~c   76 (127)
                      +.++||||+|+++|||++|+.||..........+...... .....+     .....+...... .......+.+|+.+|
T Consensus       216 ~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  295 (322)
T 3soc_A          216 FLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEEC  295 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHH
T ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHH
Confidence            3467999999999999999999853211000000000000 000001     111112221111 123455688999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhh
Q 039745           77 LLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        77 l~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |..+|.+||++.++++.+..+..
T Consensus       296 l~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          296 WDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999987654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.45  E-value=1.3e-13  Score=92.77  Aligned_cols=83  Identities=20%  Similarity=0.304  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||||+++|||++ |..||...........+           ..-.....+.    .+...+.+|+..||..+
T Consensus       362 ~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-----------~~~~~~~~p~----~~~~~l~~li~~cl~~d  426 (450)
T 1k9a_A          362 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----------EKGYKMDAPD----GCPPAVYDVMKNCWHLD  426 (450)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-----------HTTCCCCCCT----TCCHHHHHHHHHHTCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----------HcCCCCCCCC----cCCHHHHHHHHHHcCCC
Confidence            57889999999999999998 99998654432222111           0101111112    22346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++..+..+..
T Consensus       427 p~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          427 AATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHHH
Confidence            9999999999998876654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.45  E-value=6.4e-14  Score=89.91  Aligned_cols=97  Identities=18%  Similarity=0.312  Sum_probs=59.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh-----------c-CCcCc-ccccHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM-----------V-DPAVN-KACLDESLK   67 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~-~~~~~~~~~   67 (127)
                      .++.++||||+|++++|+++|+.||..... .....+.............+.           . .+... .........
T Consensus       201 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (320)
T 2i6l_A          201 NYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISR  280 (320)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCH
T ss_pred             cCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhH
Confidence            467889999999999999999999965443 222222211100000000000           0 00000 000011234


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        68 ~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+.+|+.+||..+|.+||++.++++|.|+..
T Consensus       281 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (320)
T 2i6l_A          281 EAVDFLEQILTFSPMDRLTAEEALSHPYMSI  311 (320)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence            6779999999999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.44  E-value=3.6e-13  Score=86.05  Aligned_cols=84  Identities=21%  Similarity=0.335  Sum_probs=59.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||...........+           .....+.....++    ..+.+|+.+||..+|
T Consensus       195 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~~----~~l~~li~~~l~~dp  259 (303)
T 3a7i_A          195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-----------PKNNPPTLEGNYS----KPLKEFVEACLNKEP  259 (303)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHSCCCCCCSSCC----HHHHHHHHHHCCSSG
T ss_pred             CCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh-----------hcCCCCCCccccC----HHHHHHHHHHcCCCh
Confidence            4678999999999999999999998654433222111           1111122222222    356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++|+++....
T Consensus       260 ~~Rps~~~ll~~~~~~~~~  278 (303)
T 3a7i_A          260 SFRPTAKELLKHKFILRNA  278 (303)
T ss_dssp             GGSCCHHHHTTCHHHHHHC
T ss_pred             hhCcCHHHHhhChhhhcCC
Confidence            9999999999999986654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=9.8e-14  Score=90.39  Aligned_cols=97  Identities=18%  Similarity=0.254  Sum_probs=60.7

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcC------CcCcccc-----cHHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVD------PAVNKAC-----LDESLKTMM   70 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----~~~~~~~~~   70 (127)
                      ++.++||||+|++++||++|.+||.... ...+..+............+....      .......     .......+.
T Consensus       190 ~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (346)
T 1ua2_A          190 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLL  269 (346)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHH
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHH
Confidence            6789999999999999999999986443 333333332222111101110000      0000000     011234677


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|+.+||..+|.+||++.++++|.|+...
T Consensus       270 ~li~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          270 DLIQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             HHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence            99999999999999999999999998654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.44  E-value=7.3e-14  Score=90.64  Aligned_cols=82  Identities=16%  Similarity=0.314  Sum_probs=58.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|+++++|++|+.||...........+.   .         .........    ...+.+|+.+||..+|.
T Consensus       218 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~---------~~~~~~~~~----~~~~~~li~~~l~~dp~  281 (335)
T 2owb_A          218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK---K---------NEYSIPKHI----NPVAASLIQKMLQTDPT  281 (335)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---H---------TCCCCCTTS----CHHHHHHHHHHTCSSGG
T ss_pred             CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh---c---------CCCCCCccC----CHHHHHHHHHHccCChh
Confidence            5779999999999999999999997554332221110   0         001111112    23566899999999999


Q ss_pred             CCCCHHHHHHHHHHhhhc
Q 039745           83 ERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~  100 (127)
                      +||++.++++|.|+....
T Consensus       282 ~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          282 ARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             GSCCGGGGGGSHHHHTSC
T ss_pred             HCcCHHHHhcCccccCCC
Confidence            999999999999987654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.44  E-value=9.2e-14  Score=88.48  Aligned_cols=82  Identities=16%  Similarity=0.314  Sum_probs=58.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++|+||+|+++++|++|..||...........+.           . .........    ...+.+++.+||..+|.
T Consensus       192 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-----------~-~~~~~~~~~----~~~~~~li~~~l~~~p~  255 (294)
T 2rku_A          192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----------K-NEYSIPKHI----NPVAASLIQKMLQTDPT  255 (294)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-----------T-TCCCCCTTS----CHHHHHHHHHHTCSSGG
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-----------h-ccCCCcccc----CHHHHHHHHHHcccChh
Confidence            5679999999999999999999997554332211110           0 001111112    23566899999999999


Q ss_pred             CCCCHHHHHHHHHHhhhc
Q 039745           83 ERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~  100 (127)
                      +||++.++++|.++....
T Consensus       256 ~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          256 ARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             GSCCGGGGGGSHHHHTSC
T ss_pred             hCcCHHHHhhChheecCC
Confidence            999999999999986543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.44  E-value=1.4e-13  Score=88.18  Aligned_cols=93  Identities=16%  Similarity=0.189  Sum_probs=59.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||........ .+..        .......+....   ......+.+++.+||..+|
T Consensus       212 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~--------~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp  279 (310)
T 2wqm_A          212 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCK--------KIEQCDYPPLPS---DHYSEELRQLVNMCINPDP  279 (310)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-HHHH--------HHHTTCSCCCCT---TTSCHHHHHHHHHHTCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-HHHH--------HhhcccCCCCcc---cccCHHHHHHHHHHcCCCh
Confidence            467899999999999999999999854322111 1111        111111111110   1122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhccccccc
Q 039745           82 AERPSVEDVLWNLQFAAQVQDAWHS  106 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~~~~~~  106 (127)
                      .+||++.+++.++..+....+.+..
T Consensus       280 ~~Rps~~~il~~l~~l~~~~~~~~~  304 (310)
T 2wqm_A          280 EKRPDVTYVYDVAKRMHACTASSLE  304 (310)
T ss_dssp             GGSCCHHHHHHHHHHHHHHHC----
T ss_pred             hhCCCHHHHHHHHHHHHHhhhhhhh
Confidence            9999999999999888776655443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.44  E-value=1.7e-13  Score=86.74  Aligned_cols=84  Identities=14%  Similarity=0.274  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |..||...........+           ..........    .....+.+++.+||..+
T Consensus       193 ~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i-----------~~~~~~~~~~----~~~~~l~~li~~~l~~~  257 (281)
T 1mp8_A          193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-----------ENGERLPMPP----NCPPTLYSLMTKCWAYD  257 (281)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----------HTTCCCCCCT----TCCHHHHHHHHHHTCSS
T ss_pred             CCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHH-----------HcCCCCCCCC----CCCHHHHHHHHHHccCC
Confidence            46778999999999999996 89898654433222111           0001111111    22345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++++..+...
T Consensus       258 p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          258 PSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHHH
Confidence            99999999999999876553

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.44  E-value=8.7e-14  Score=88.07  Aligned_cols=85  Identities=18%  Similarity=0.296  Sum_probs=59.1

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++|+++ |+.||...........+.           ...........    ...+.+++.+||..+
T Consensus       190 ~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~l~~li~~~l~~~  254 (281)
T 3cc6_A          190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-----------KGDRLPKPDLC----PPVLYTLMTRCWDYD  254 (281)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-----------HTCCCCCCTTC----CHHHHHHHHHHTCSS
T ss_pred             CCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-----------cCCCCCCCCCC----CHHHHHHHHHHccCC
Confidence            46788999999999999998 999986433322222211           00011111112    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.+++.++..+....
T Consensus       255 p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          255 PSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHH
T ss_pred             chhCcCHHHHHHHHHHHHHhh
Confidence            999999999999998776544

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.44  E-value=5.5e-13  Score=85.55  Aligned_cols=85  Identities=15%  Similarity=0.235  Sum_probs=58.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|..||............           .....+...  ........+.+|+.+||..+|
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp  267 (314)
T 3com_A          201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-----------PTNPPPTFR--KPELWSDNFTDFVKQCLVKSP  267 (314)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----------HHSCCCCCS--SGGGSCHHHHHHHHHHTCSCT
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-----------hcCCCcccC--CcccCCHHHHHHHHHHccCCh
Confidence            3678999999999999999999999654432211111           001111111  011112356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.|+...
T Consensus       268 ~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          268 EQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             TTSCCHHHHTTSHHHHTC
T ss_pred             hhCcCHHHHHhCHHHhcC
Confidence            999999999999997653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.44  E-value=5.2e-14  Score=92.04  Aligned_cols=99  Identities=18%  Similarity=0.242  Sum_probs=62.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHH--------hhhcCC---cCcc----cccHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESAR--------RSMVDP---AVNK----ACLDES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~---~~~~----~~~~~~   65 (127)
                      .++.++||||+|++++++++|+.||.... ......+............        ......   ....    ......
T Consensus       210 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (362)
T 3pg1_A          210 GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA  289 (362)
T ss_dssp             TCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTS
T ss_pred             CCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCC
Confidence            46789999999999999999999996543 3333333332222111110        000000   0000    001112


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      ...+.+|+.+||..+|.+||++.++++|+|+..-.
T Consensus       290 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          290 DPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            34577999999999999999999999999986543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.44  E-value=1.2e-13  Score=88.73  Aligned_cols=83  Identities=17%  Similarity=0.264  Sum_probs=56.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh--HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++|+.||....  ......+.            ....+.....  ......+.+|+.+||..
T Consensus       205 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~------------~~~~~~~~~~--~~~~~~l~~li~~~l~~  270 (318)
T 2dyl_A          205 DYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL------------QEEPPLLPGH--MGFSGDFQSFVKDCLTK  270 (318)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH------------HSCCCCCCSS--SCCCHHHHHHHHHHTCS
T ss_pred             CCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh------------ccCCCCCCcc--CCCCHHHHHHHHHHccC
Confidence            36779999999999999999999986422  12111111            0011111110  01123567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|.+||++.++++|.++..
T Consensus       271 dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          271 DHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             CTTTSCCHHHHTTSHHHHH
T ss_pred             ChhHCcCHHHHhhCHHHHh
Confidence            9999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.44  E-value=3.1e-13  Score=84.81  Aligned_cols=83  Identities=16%  Similarity=0.340  Sum_probs=57.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++|+||+|++++++++ |..||...........+   .        ...........    ...+.+++.+||..+
T Consensus       181 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i---~--------~~~~~~~~~~~----~~~l~~li~~~l~~~  245 (267)
T 3t9t_A          181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI---S--------TGFRLYKPRLA----STHVYQIMNHCWRER  245 (267)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---H--------TTCCCCCCTTS----CHHHHHHHHHHTCSS
T ss_pred             CccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHH---h--------cCCcCCCCccC----cHHHHHHHHHHccCC
Confidence            46778999999999999999 89998654433222111   0        10111111111    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++++..+..
T Consensus       246 p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          246 PEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.44  E-value=2.7e-13  Score=86.19  Aligned_cols=86  Identities=26%  Similarity=0.416  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++|+.||.... .........          .....+.. ..........+.+|+..||..+
T Consensus       201 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~  269 (289)
T 3og7_A          201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG----------RGSLSPDL-SKVRSNCPKRMKRLMAECLKKK  269 (289)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHH----------HTSCCCCT-TSSCTTSCHHHHHHHHHHTCSS
T ss_pred             CCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhc----------ccccCcch-hhccccCCHHHHHHHHHHccCC
Confidence            35678999999999999999999996432 222222221          01111111 1111223346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++.+..+.
T Consensus       270 p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          270 RDERPSFPRILAEIEELA  287 (289)
T ss_dssp             GGGSCCHHHHHHHHHHTT
T ss_pred             hhhCCCHHHHHHHHHHHh
Confidence            999999999999887653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.44  E-value=2.4e-14  Score=92.29  Aligned_cols=98  Identities=13%  Similarity=0.144  Sum_probs=57.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++++++|..||..........................................+.+|+.+||..+|.
T Consensus       214 ~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~  293 (318)
T 3lxp_A          214 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEAS  293 (318)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcc
Confidence            45689999999999999999999864432211100000000000001111111111111122234677999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhc
Q 039745           83 ERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~  100 (127)
                      +||++.++++.+..+...
T Consensus       294 ~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          294 FRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             GSCCHHHHHHHHHHHHHH
T ss_pred             cCcCHHHHHHHHHHHHHh
Confidence            999999999988866543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.44  E-value=3e-13  Score=86.88  Aligned_cols=87  Identities=21%  Similarity=0.287  Sum_probs=57.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|+.||............  ...          ...............+.+|+.+||..+|
T Consensus       195 ~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~dP  262 (311)
T 3ork_A          195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH--VRE----------DPIPPSARHEGLSADLDAVVLKALAKNP  262 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHC----------CCCCHHHHSTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--hcC----------CCCCcccccCCCCHHHHHHHHHHHhcCH
Confidence            4678999999999999999999999655433221111  000          0000000001122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||+..+++.+.++....
T Consensus       263 ~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          263 ENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             GGSCSSHHHHHHHHHHHHT
T ss_pred             hhChhhHHHHHHHHHHHhc
Confidence            9999999999888876543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.44  E-value=2.3e-13  Score=91.64  Aligned_cols=83  Identities=23%  Similarity=0.319  Sum_probs=57.9

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.++.++||||||++++|+++ |+.||...........+   .        .-......    ......+.+|+.+||..
T Consensus       356 ~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i---~--------~~~~~~~~----~~~~~~l~~li~~cl~~  420 (452)
T 1fmk_A          356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---E--------RGYRMPCP----PECPESLHDLMCQCWRK  420 (452)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---H--------TTCCCCCC----TTSCHHHHHHHHHHTCS
T ss_pred             CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H--------cCCCCCCC----CCCCHHHHHHHHHHccC
Confidence            357889999999999999999 89998654433222111   0        00111111    12234667999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|.+||++.+++..+..+.
T Consensus       421 dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          421 EPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             SGGGSCCHHHHHHHHHTTT
T ss_pred             ChhhCcCHHHHHHHHHHHh
Confidence            9999999999999887554

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.44  E-value=4.9e-14  Score=92.25  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=57.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.++||||+|++++||++|..||...........+.   .      ..   ...+..    ....+.+|+.+||..+|.
T Consensus       201 ~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~------~~---~~~p~~----~~~~~~~li~~lL~~dP~  264 (353)
T 3txo_A          201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---N------DE---VVYPTW----LHEDATGILKSFMTKNPT  264 (353)
T ss_dssp             CTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H------CC---CCCCTT----SCHHHHHHHHHHTCSSGG
T ss_pred             cCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH---c------CC---CCCCCC----CCHHHHHHHHHHhhhCHH
Confidence            6789999999999999999999997555433322220   0      00   111111    223566999999999999


Q ss_pred             CCCCH------HHHHHHHHHhh
Q 039745           83 ERPSV------EDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~------~~~~~~~~~~~   98 (127)
                      +|+++      .++++|+||..
T Consensus       265 ~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          265 MRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             GSTTSGGGTCTHHHHTSGGGTT
T ss_pred             HccCCcccCCHHHHhhCCcccC
Confidence            99998      89999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.44  E-value=1.2e-13  Score=93.56  Aligned_cols=81  Identities=16%  Similarity=0.262  Sum_probs=57.9

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|++++||++|..||.......+...+   ..       ..  ...+...    ...+.+|+.+||..+|.+
T Consensus       194 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i---~~-------~~--~~~p~~~----s~~~~~Li~~~L~~dP~~  257 (476)
T 2y94_A          194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI---CD-------GI--FYTPQYL----NPSVISLLKHMLQVDPMK  257 (476)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHH---HT-------TC--CCCCTTC----CHHHHHHHHHHTCSSTTT
T ss_pred             CCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHH---hc-------CC--cCCCccC----CHHHHHHHHHHcCCCchh
Confidence            57899999999999999999999755443322221   00       00  0111111    235679999999999999


Q ss_pred             CCCHHHHHHHHHHhhhc
Q 039745           84 RPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~  100 (127)
                      ||++.++++|.|+....
T Consensus       258 Rpt~~eil~hp~~~~~~  274 (476)
T 2y94_A          258 RATIKDIREHEWFKQDL  274 (476)
T ss_dssp             SCCHHHHHTCHHHHTTC
T ss_pred             CcCHHHHHhCHHhhhcC
Confidence            99999999999987643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.43  E-value=4e-13  Score=93.50  Aligned_cols=84  Identities=12%  Similarity=0.197  Sum_probs=58.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||++ |+.||...........+.           .-......    ..+...+.+|+..||..
T Consensus       514 ~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-----------~~~~~~~p----~~~~~~l~~li~~cl~~  578 (613)
T 2ozo_A          514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----------QGKRMECP----PECPPELYALMSDCWIY  578 (613)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-----------TTCCCCCC----TTCCHHHHHHHHHTTCS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----------cCCCCCCC----CcCCHHHHHHHHHHcCC
Confidence            357889999999999999998 999996544332222221           10111111    22334677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.++++.+..+..
T Consensus       579 dP~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          579 KWEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHHHHHHHHHH
Confidence            99999999999888776543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.43  E-value=1.6e-13  Score=87.99  Aligned_cols=82  Identities=21%  Similarity=0.334  Sum_probs=58.1

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++||++ |..||...........+.           ....+.....    ....+.+++.+||..+|
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~~~~li~~~l~~dp  293 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK-----------TGHRMERPDN----CSEEMYRLMLQCWKQEP  293 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-----------TTCCCCCCTT----CCHHHHHHHHHHTCSSG
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhh-----------cCCcCCCCcc----CCHHHHHHHHHHccCCh
Confidence            5778999999999999999 999986544433322221           1111111112    23456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++++..+..
T Consensus       294 ~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          294 DKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999886543

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.43  E-value=1e-13  Score=88.37  Aligned_cols=96  Identities=21%  Similarity=0.257  Sum_probs=59.4

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh-----cCCcCcc----c---ccHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM-----VDPAVNK----A---CLDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----~---~~~~~~~~~   69 (127)
                      ++.++||||+|++++++++|+.||..... .....+...............     ..+....    .   ........+
T Consensus       181 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (299)
T 2r3i_A          181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG  260 (299)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHH
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHH
Confidence            67899999999999999999999965433 333333322111111000000     0000000    0   001122466


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+|+.+||..+|.+||++.++++|.|+..
T Consensus       261 ~~li~~~L~~dP~~Rpt~~~~l~hp~~~~  289 (299)
T 2r3i_A          261 RSLLSQMLHYDPNKRISAKAALAHPFFQD  289 (299)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHhcCcCcccCCCHHHHhcChhhhc
Confidence            79999999999999999999999998753

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.43  E-value=1e-13  Score=88.32  Aligned_cols=94  Identities=14%  Similarity=0.205  Sum_probs=58.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHH-----HHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHh
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQA-----VITADESARRSMVDPAVNKACLDESLKTMMEVCVRC   76 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c   76 (127)
                      .++.++||||+|++++|+++|..|+..............     ........+.........    ......+.+|+..|
T Consensus       193 ~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~  268 (295)
T 3ugc_A          193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP----DGCPDEIYMIMTEC  268 (295)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCC----cCcCHHHHHHHHHH
Confidence            467899999999999999999998865433211110000     000000001111111111    22234677999999


Q ss_pred             cccCCCCCCCHHHHHHHHHHhhh
Q 039745           77 LLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        77 l~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |..+|.+||++.++++.+..+..
T Consensus       269 l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          269 WNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             SCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCChhhCCCHHHHHHHHHHHHH
Confidence            99999999999999999887654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.43  E-value=2.9e-13  Score=87.77  Aligned_cols=84  Identities=19%  Similarity=0.202  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..||...........+   ..        -..+.....    ....+.+++.+||..+
T Consensus       252 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~---~~--------~~~~~~~~~----~~~~l~~li~~~l~~~  316 (343)
T 1luf_A          252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV---RD--------GNILACPEN----CPLELYNLMRLCWSKL  316 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---HT--------TCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHH---hC--------CCcCCCCCC----CCHHHHHHHHHHcccC
Confidence            47789999999999999999 99998654433222211   00        000111112    2235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++++..+...
T Consensus       317 p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          317 PADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             GGGSCCHHHHHHHHHHTTC-
T ss_pred             cccCCCHHHHHHHHHHHHhh
Confidence            99999999999999876543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.43  E-value=2.6e-13  Score=86.47  Aligned_cols=87  Identities=20%  Similarity=0.306  Sum_probs=55.5

Q ss_pred             CCchhHHHHHHHHHHHHhC----------CCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcc-cccHHHHHHHH
Q 039745            4 EDKIDIYDFGLILLEIIVG----------RPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNK-ACLDESLKTMM   70 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g----------~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   70 (127)
                      +.++||||+|++++||++|          ..||.....  .....+....       ......+.... .........+.
T Consensus       201 ~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~  273 (301)
T 3q4u_A          201 YKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV-------CVDQQRPNIPNRWFSDPTLTSLA  273 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH-------TTSCCCCCCCGGGGGSHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHH-------hccCCCCCCChhhccCccHHHHH
Confidence            3589999999999999999          777743211  1111111000       00111122211 12234566788


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|+.+||..+|.+||++.++++.+..+
T Consensus       274 ~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          274 KLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            999999999999999999999988753

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.43  E-value=4.3e-14  Score=91.44  Aligned_cols=90  Identities=11%  Similarity=0.230  Sum_probs=57.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcC--CcCcccccHHHHHHHHHHHHHhcc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVD--PAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      .|+.++||||+|+++++|++|..||........ .....        .+..+..  ..............+.+|+.+||.
T Consensus       185 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  256 (325)
T 3kn6_A          185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE--------IMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLT  256 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH--------HHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHC
T ss_pred             CCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH--------HHHHHHcCCCCCCcccccCCCHHHHHHHHHHCC
Confidence            467899999999999999999999964332100 00000        0011111  111111112234567799999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 039745           79 KNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+|.+||++.++++|.|+...
T Consensus       257 ~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          257 VDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             CCTTTCCCTTTSTTCGGGCTT
T ss_pred             CChhHCCCHHHHhcChhhccC
Confidence            999999999999999987543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.43  E-value=1.6e-12  Score=84.65  Aligned_cols=89  Identities=11%  Similarity=0.077  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch--hHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK--EVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++|+.||...  ..........................       ......+.+++..||..
T Consensus       236 ~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~li~~~l~~  308 (345)
T 2v62_A          236 ALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPS-------GSSCCEIAQFLVCAHSL  308 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCT-------TSCCHHHHHHHHHHHTC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccc-------cccHHHHHHHHHHHhhc
Confidence            4688999999999999999999999532  21111111111111111011111110       01223577999999999


Q ss_pred             CCCCCCCHHHHHHHHHHh
Q 039745           80 NPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|.+||++.++++.+...
T Consensus       309 dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          309 AYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             CTTCCCCHHHHHHHHCTT
T ss_pred             CcccCCCHHHHHHHHhcc
Confidence            999999999999988643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.43  E-value=2.3e-13  Score=88.07  Aligned_cols=89  Identities=12%  Similarity=0.037  Sum_probs=56.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||....................     .......   ....+ .+.+++..||..+|
T Consensus       193 ~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-----~~~~~~~---~~~~p-~~~~li~~~l~~~p  263 (330)
T 2izr_A          193 EQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-----ATPIEVL---CENFP-EMATYLRYVRRLDF  263 (330)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-----HSCHHHH---TTTCH-HHHHHHHHHHHCCT
T ss_pred             CCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-----cCCHHHH---hccCh-HHHHHHHHHHhCCC
Confidence            367899999999999999999999965332222121111111100     0000000   00012 67799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++.+.+.....
T Consensus       264 ~~RP~~~~l~~~l~~~~~  281 (330)
T 2izr_A          264 FEKPDYDYLRKLFTDLFD  281 (330)
T ss_dssp             TCCCCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHH
Confidence            999999999988775543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.43  E-value=5.6e-14  Score=93.81  Aligned_cols=85  Identities=19%  Similarity=0.293  Sum_probs=56.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+|+++++|++|..||..... ..+...+.   ...         ..............+.+|+.+||..+
T Consensus       320 ~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~---~~~---------~~~~~~~~~~~~~~~~~li~~~L~~d  387 (419)
T 3i6u_A          320 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT---SGK---------YNFIPEVWAEVSEKALDLVKKLLVVD  387 (419)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHH---TTC---------CCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             CCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHh---cCC---------CCCCchhhcccCHHHHHHHHHHccCC
Confidence            356789999999999999999999854321 11111110   000         00000001112345779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++|+|+..
T Consensus       388 P~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          388 PKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             TTTSCCHHHHHHSGGGCC
T ss_pred             hhHCcCHHHHhCCcccCC
Confidence            999999999999999754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.43  E-value=2e-14  Score=93.50  Aligned_cols=83  Identities=16%  Similarity=0.267  Sum_probs=57.4

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|+++++|++|..||.......+...           ... .....+..    ....+.+|+.+||..||.+
T Consensus       186 ~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~-----------i~~-~~~~~p~~----~s~~~~~li~~~L~~dP~~  249 (336)
T 3h4j_B          186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK-----------VNS-CVYVMPDF----LSPGAQSLIRRMIVADPMQ  249 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC-----------CCS-SCCCCCTT----SCHHHHHHHHTTSCSSGGG
T ss_pred             CCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH-----------HHc-CCCCCccc----CCHHHHHHHHHHcCCChhH
Confidence            5689999999999999999999964332111000           000 00111111    2235679999999999999


Q ss_pred             CCCHHHHHHHHHHhhhccc
Q 039745           84 RPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~~~~  102 (127)
                      ||++.++++|+|+....+.
T Consensus       250 Rpt~~eil~hp~~~~~~~~  268 (336)
T 3h4j_B          250 RITIQEIRRDPWFNVNLPD  268 (336)
T ss_dssp             SCCHHHHTTCHHHHTTCCG
T ss_pred             CcCHHHHHhChhhccCCcc
Confidence            9999999999999765443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.42  E-value=1.9e-13  Score=85.89  Aligned_cols=82  Identities=15%  Similarity=0.266  Sum_probs=57.0

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++++++ |..||............           ............    ...+.+++..||..+|
T Consensus       182 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~~p  246 (268)
T 3sxs_A          182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV-----------SQGHRLYRPHLA----SDTIYQIMYSCWHELP  246 (268)
T ss_dssp             EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-----------HTTCCCCCCTTS----CHHHHHHHHHTTCSSG
T ss_pred             CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH-----------HcCCCCCCCCcC----hHHHHHHHHHHcCCCh
Confidence            5679999999999999998 99998655433222111           011111111111    2356789999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++++..+..
T Consensus       247 ~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          247 EKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             GGSCCHHHHHHHHGGGCC
T ss_pred             hhCcCHHHHHHHHHHhhh
Confidence            999999999999876543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.42  E-value=1.3e-13  Score=89.22  Aligned_cols=81  Identities=12%  Similarity=0.221  Sum_probs=57.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||...........+   ...         ....+...    ...+.+|+.+||..+|
T Consensus       197 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~~---------~~~~p~~~----~~~~~~li~~~L~~dp  260 (327)
T 3a62_A          197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI---LKC---------KLNLPPYL----TQEARDLLKKLLKRNA  260 (327)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHT---------CCCCCTTS----CHHHHHHHHHHSCSCG
T ss_pred             CCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHH---HhC---------CCCCCCCC----CHHHHHHHHHHHhcCH
Confidence            4678999999999999999999999655433222111   000         01111112    2356799999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+||     ++.+++.|+|+..
T Consensus       261 ~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          261 ASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             GGSTTSSTTTHHHHHHSGGGSS
T ss_pred             hhccCCCCCCHHHHHcCCcccC
Confidence            9999     8899999999753

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.42  E-value=1.6e-13  Score=88.67  Aligned_cols=81  Identities=15%  Similarity=0.249  Sum_probs=57.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+|++++||++|..||...........+   ..       .  ....+...    ...+.+++.+||..+|
T Consensus       179 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i---~~-------~--~~~~p~~~----~~~~~~li~~lL~~dp  242 (318)
T 1fot_A          179 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI---LN-------A--ELRFPPFF----NEDVKDLLSRLITRDL  242 (318)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HH-------C--CCCCCTTS----CHHHHHHHHHHTCSCT
T ss_pred             CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---Hh-------C--CCCCCCCC----CHHHHHHHHHHhccCH
Confidence            4678999999999999999999999654433222111   00       0  01111122    2356699999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+|+     ++.+++.|+|+..
T Consensus       243 ~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          243 SQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HHcCCCcCCCHHHHhcCccccC
Confidence            9999     8999999999753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.42  E-value=5.1e-13  Score=93.32  Aligned_cols=81  Identities=17%  Similarity=0.252  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+|++++||++ |+.||...........+.           .........    .....+.+|+..||..+
T Consensus       548 ~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-----------~~~~~~~p~----~~~~~l~~li~~cl~~d  612 (635)
T 4fl3_A          548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----------KGERMGCPA----GCPREMYDLMNLCWTYD  612 (635)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----------TTCCCCCCT----TCCHHHHHHHHHHTCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------cCCCCCCCC----CCCHHHHHHHHHHcCCC
Confidence            57889999999999999998 999997555433322221           111111222    22346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||++.+++..+..+
T Consensus       613 P~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          613 VENRPGFAAVELRLRNY  629 (635)
T ss_dssp             TTTSCCHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHH
Confidence            99999999999887754

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.42  E-value=4.4e-14  Score=91.23  Aligned_cols=89  Identities=16%  Similarity=0.220  Sum_probs=56.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|+++++|++|..||....... ..+.    .     ......+.............+.+|+.+||..+|
T Consensus       205 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~----~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  274 (327)
T 3aln_A          205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQLT----Q-----VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDE  274 (327)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHSCCCSSCC--------C----C-----CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHHH----H-----HhcCCCCCCCCcccccCCHHHHHHHHHHhhCCh
Confidence            36789999999999999999999986432110 0000    0     000001111111111123457799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++|+|+....
T Consensus       275 ~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          275 SKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             GGSCCHHHHTTSHHHHHHH
T ss_pred             hhCcCHHHHHhChHHHHhH
Confidence            9999999999999986543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.42  E-value=1.3e-13  Score=90.07  Aligned_cols=81  Identities=14%  Similarity=0.197  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+|++++||++|..||...........+.   ..         ....+...    ...+.+|+.+||..+|
T Consensus       214 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~~---------~~~~p~~~----~~~~~~li~~lL~~dp  277 (350)
T 1rdq_E          214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV---SG---------KVRFPSHF----SSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HC---------CCCCCTTC----CHHHHHHHHHHSCSCT
T ss_pred             CCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHH---cC---------CCCCCCCC----CHHHHHHHHHHhhcCH
Confidence            46789999999999999999999996554433322220   00         11111222    2356799999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|++     +.+++.|.|+..
T Consensus       278 ~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          278 TKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HhccCCccCCHHHHHhCcCcCC
Confidence            99998     999999999753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.42  E-value=6.6e-13  Score=86.61  Aligned_cols=84  Identities=19%  Similarity=0.322  Sum_probs=58.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++ |..||...... ......           ............    ...+.+++.+||..
T Consensus       271 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~  335 (359)
T 3vhe_A          271 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-----------KEGTRMRAPDYT----TPEMYQTMLDCWHG  335 (359)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH-----------HHTCCCCCCTTC----CHHHHHHHHHHTCS
T ss_pred             CCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH-----------HcCCCCCCCCCC----CHHHHHHHHHHccC
Confidence            57889999999999999998 99998643322 111111           011111111122    23567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhc
Q 039745           80 NPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      +|.+||++.++++|+..+...
T Consensus       336 dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          336 EPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHH
T ss_pred             ChhhCCCHHHHHHHHHHHHHH
Confidence            999999999999999877653

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.42  E-value=3.7e-13  Score=86.38  Aligned_cols=83  Identities=18%  Similarity=0.293  Sum_probs=58.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|+++++|++ |..||...........+   .        ....+.....    ....+.+++.+||..+
T Consensus       225 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~---~--------~~~~~~~~~~----~~~~l~~li~~~l~~d  289 (313)
T 3brb_A          225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL---L--------HGHRLKQPED----CLDELYEIMYSCWRTD  289 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH---H--------TTCCCCCBTT----CCHHHHHHHHHTTCSS
T ss_pred             CccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH---H--------cCCCCCCCcc----ccHHHHHHHHHHcCCC
Confidence            46788999999999999999 88888654433222211   0        0011112222    2235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++.++..+..
T Consensus       290 p~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          290 PLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999999987654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.42  E-value=3.3e-13  Score=85.85  Aligned_cols=83  Identities=16%  Similarity=0.206  Sum_probs=58.2

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++++++ |..||...........+.           ....+....    .....+.+++..||..+|
T Consensus       197 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~l~~li~~~l~~dp  261 (291)
T 1xbb_A          197 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----------KGERMGCPA----GCPREMYDLMNLCWTYDV  261 (291)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----------TTCCCCCCT----TCCHHHHHHHHHHTCSST
T ss_pred             CChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----------cCCCCCCCC----CCCHHHHHHHHHHcCCCh
Confidence            4568999999999999999 999997554433322221           111111212    223457799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++.+..+...
T Consensus       262 ~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          262 ENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             TTSCCHHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHHH
Confidence            9999999999988765543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.42  E-value=1.9e-13  Score=91.57  Aligned_cols=82  Identities=17%  Similarity=0.167  Sum_probs=55.9

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+||+++||++ |..||............           ..........  .......+.+|+.+||..+|
T Consensus       206 ~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP  272 (432)
T 3p23_A          206 PTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL-----------GACSLDCLHP--EKHEDVIARELIEKMIAMDP  272 (432)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHT-----------TCCCCTTSCT--TCHHHHHHHHHHHHHSCSSG
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHh-----------ccCCccccCc--cccccHHHHHHHHHHHhCCH
Confidence            5668999999999999999 88888654433222111           0000010100  11233456799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 039745           82 AERPSVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~   97 (127)
                      .+||++.++++|+|+.
T Consensus       273 ~~Rps~~evl~hp~f~  288 (432)
T 3p23_A          273 QKRPSAKHVLKHPFFW  288 (432)
T ss_dssp             GGSCCHHHHHTSTTTC
T ss_pred             hhCCCHHHHHhCcccc
Confidence            9999999999998874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.42  E-value=1.1e-13  Score=89.30  Aligned_cols=85  Identities=19%  Similarity=0.307  Sum_probs=56.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++|..||...... .+...+.   ...         ..............+.+|+.+||..+
T Consensus       195 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~li~~~l~~d  262 (322)
T 2ycf_A          195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT---SGK---------YNFIPEVWAEVSEKALDLVKKLLVVD  262 (322)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH---HTC---------CCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH---hCc---------cccCchhhhhcCHHHHHHHHHHcccC
Confidence            4678999999999999999999998643221 1211111   000         00000000112345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++|.|+..
T Consensus       263 P~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          263 PKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             TTTSCCHHHHHTSGGGCC
T ss_pred             HhhCCCHHHHhhCcCcCC
Confidence            999999999999988643

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.41  E-value=2.2e-13  Score=92.46  Aligned_cols=89  Identities=8%  Similarity=0.054  Sum_probs=55.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhh-chHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITA-DESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||||+++|||++|+.||...........+...... .......+..         .....+.+|+..||..+
T Consensus       189 ~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~---------~~p~~l~~li~~cl~~d  259 (483)
T 3sv0_A          189 EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCR---------GYPTEFASYFHYCRSLR  259 (483)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHT---------TSCHHHHHHHHHHHTCC
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhc---------CCcHHHHHHHHHHhcCC
Confidence            4677899999999999999999998643221111111100000 0000000000         11235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++.+..+..
T Consensus       260 P~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          260 FDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             TTCCCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999987776543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.41  E-value=3.2e-13  Score=87.68  Aligned_cols=85  Identities=15%  Similarity=0.164  Sum_probs=57.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++ |..||..... ......+           ...........    ....+.+|+.+||..
T Consensus       250 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~l~~li~~~l~~  314 (344)
T 1rjb_A          250 IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI-----------QNGFKMDQPFY----ATEEIYIIMQSCWAF  314 (344)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH-----------HTTCCCCCCTT----CCHHHHHHHHHHTCS
T ss_pred             CCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHH-----------hcCCCCCCCCC----CCHHHHHHHHHHcCC
Confidence            57889999999999999998 9999864332 2111111           11111111111    234567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.+++.++.......
T Consensus       315 dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          315 DSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             SGGGSCCHHHHHHHHHHHC---
T ss_pred             CchhCcCHHHHHHHHHHHHHHH
Confidence            9999999999999998766543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.41  E-value=2.3e-13  Score=88.62  Aligned_cols=98  Identities=19%  Similarity=0.260  Sum_probs=60.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhch-------------HHHhhhcC-C-cCcccccHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADE-------------SARRSMVD-P-AVNKACLDES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~-~-~~~~~~~~~~   65 (127)
                      .++.++||||+|+++++|++|..||...... .+..+.........             ........ + ..........
T Consensus       199 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (353)
T 2b9h_A          199 KYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV  278 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTS
T ss_pred             CccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccC
Confidence            4678999999999999999999999654432 22222221111110             00000000 0 0000001122


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ...+.+|+.+||..||.+||++.++++|+|+...
T Consensus       279 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          279 NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence            3456799999999999999999999999997543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.41  E-value=1.4e-13  Score=90.05  Aligned_cols=80  Identities=21%  Similarity=0.358  Sum_probs=57.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+|++++||++|+.||...........+.   .         .....+...    ...+.+|+.+||..+|
T Consensus       197 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~---------~~~~~p~~~----s~~~~~li~~lL~~dP  260 (353)
T 2i0e_A          197 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM---E---------HNVAYPKSM----SKEAVAICKGLMTKHP  260 (353)
T ss_dssp             CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H---------CCCCCCTTS----CHHHHHHHHHHTCSCT
T ss_pred             CcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH---h---------CCCCCCCCC----CHHHHHHHHHHhhcCH
Confidence            46789999999999999999999997555433322220   0         011111122    2356799999999999


Q ss_pred             CCCCC-----HHHHHHHHHHh
Q 039745           82 AERPS-----VEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~   97 (127)
                      .+|++     +.+++.|.||.
T Consensus       261 ~~R~~~~~~~~~~i~~h~~f~  281 (353)
T 2i0e_A          261 GKRLGCGPEGERDIKEHAFFR  281 (353)
T ss_dssp             TSCTTCSTTHHHHHHTSGGGT
T ss_pred             HHcCCCCCCCHHHHhcCcccc
Confidence            99995     68999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.41  E-value=1.9e-13  Score=92.97  Aligned_cols=82  Identities=21%  Similarity=0.322  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||||+++|||++ |..||...........+.           ........    ......+.+|+.+||..+
T Consensus       395 ~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~l~~li~~cl~~d  459 (495)
T 1opk_A          395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERP----EGCPEKVYELMRACWQWN  459 (495)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-----------TTCCCCCC----TTCCHHHHHHHHHHTCSS
T ss_pred             CCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------cCCCCCCC----CCCCHHHHHHHHHHcCcC
Confidence            36779999999999999999 899986554433322221           11111111    122346679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++.+..+.
T Consensus       460 P~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          460 PSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             GGGSCCHHHHHHHHHTSC
T ss_pred             hhHCcCHHHHHHHHHHHH
Confidence            999999999999887543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.40  E-value=5.3e-13  Score=84.69  Aligned_cols=85  Identities=19%  Similarity=0.227  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCC-CCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|.. |+.............   .      .    .......    ...+.+|+.+||..+
T Consensus       194 ~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~---~------~----~~~~~~~----~~~l~~li~~~l~~d  256 (289)
T 4fvq_A          194 NLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE---D------R----HQLPAPK----AAELANLINNCMDYE  256 (289)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH---T------T----CCCCCCS----SCTTHHHHHHHSCSS
T ss_pred             CCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh---c------c----CCCCCCC----CHHHHHHHHHHcCCC
Confidence            36789999999999999999544 454433322222110   0      0    1111111    123568999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      |.+||++.++++++..+......
T Consensus       257 p~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          257 PDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             GGGSCCHHHHHHHHHTCC-----
T ss_pred             hhHCcCHHHHHHHHHHhcCCCCC
Confidence            99999999999999876664433

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.40  E-value=4.5e-13  Score=84.66  Aligned_cols=83  Identities=23%  Similarity=0.309  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++ |..||...........+           ...........    ....+.+++..||..+
T Consensus       190 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~l~~li~~~l~~~  254 (278)
T 1byg_A          190 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----------EKGYKMDAPDG----CPPAVYEVMKNCWHLD  254 (278)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-----------TTTCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----------hcCCCCCCccc----CCHHHHHHHHHHhcCC
Confidence            46789999999999999998 99998654433222111           11111111112    2345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++.+..+..
T Consensus       255 p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          255 AAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHHHHHh
Confidence            9999999999998887654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.40  E-value=4.3e-14  Score=89.33  Aligned_cols=80  Identities=20%  Similarity=0.283  Sum_probs=52.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++|+++|+.||............            ...+......    ....+.+++.+||..+|.
T Consensus       189 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~------------~~~~~~~~~~----~~~~~~~li~~~l~~dp~  252 (278)
T 3cok_A          189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV------------VLADYEMPSF----LSIEAKDLIHQLLRRNPA  252 (278)
T ss_dssp             ---CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C------------CSSCCCCCTT----SCHHHHHHHHHHSCSSGG
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH------------hhcccCCccc----cCHHHHHHHHHHcccCHh
Confidence            567899999999999999999998644322111000            0001111111    223567999999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      +||++.++++|.|+..
T Consensus       253 ~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          253 DRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             GSCCHHHHTTSTTTC-
T ss_pred             hCCCHHHHhcCccccC
Confidence            9999999999998654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.40  E-value=3.7e-13  Score=92.33  Aligned_cols=83  Identities=23%  Similarity=0.319  Sum_probs=57.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||++ |+.||...........+   .        .-......    ..+...+.+|+.+||..
T Consensus       439 ~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i---~--------~~~~~~~~----~~~~~~l~~li~~cl~~  503 (535)
T 2h8h_A          439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---E--------RGYRMPCP----PECPESLHDLMCQCWRK  503 (535)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH---H--------TTCCCCCC----TTCCHHHHHHHHHHTCS
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H--------cCCCCCCC----CCCCHHHHHHHHHHcCC
Confidence            357889999999999999999 89998654433222111   0        00111111    12234567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|.+||++.+++..+..+.
T Consensus       504 dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          504 EPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             SGGGSCCHHHHHHHHHTSS
T ss_pred             ChhHCcCHHHHHHHHHHHh
Confidence            9999999999999887544

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.40  E-value=1.4e-12  Score=83.69  Aligned_cols=85  Identities=19%  Similarity=0.321  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++|+++ |..||...... .....+           ............    ...+.+++..||..
T Consensus       226 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~  290 (316)
T 2xir_A          226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-----------KEGTRMRAPDYT----TPEMYQTMLDCWHG  290 (316)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH-----------HHTCCCCCCTTC----CHHHHHHHHHHTCS
T ss_pred             cccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh-----------ccCccCCCCCCC----CHHHHHHHHHHcCC
Confidence            46789999999999999998 99998643321 111111           011111111112    23567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.+++.++..+.+..
T Consensus       291 dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          291 EPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHhhh
Confidence            9999999999999998876544

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.40  E-value=4e-14  Score=92.40  Aligned_cols=81  Identities=20%  Similarity=0.390  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+|++++||++|..||...........+.   .         ..+..+...    ...+.+|+.+||..+|
T Consensus       194 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~---~---------~~~~~p~~~----s~~~~~li~~lL~~dp  257 (345)
T 1xjd_A          194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR---M---------DNPFYPRWL----EKEAKDLLVKLFVREP  257 (345)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H---------CCCCCCTTS----CHHHHHHHHHHSCSSG
T ss_pred             CCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH---h---------CCCCCCccc----CHHHHHHHHHHhcCCH
Confidence            47889999999999999999999997555433322220   0         011121112    2356799999999999


Q ss_pred             CCCCCHH-HHHHHHHHhh
Q 039745           82 AERPSVE-DVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~-~~~~~~~~~~   98 (127)
                      .+||++. ++++|+|+..
T Consensus       258 ~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          258 EKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             GGSBTTBSCGGGSGGGTT
T ss_pred             hHcCCChHHHHcCccccC
Confidence            9999998 8999998743

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.40  E-value=6.5e-13  Score=84.21  Aligned_cols=83  Identities=23%  Similarity=0.368  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++ |..||...........+           ...........+    ...+.+|+..||..+
T Consensus       188 ~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~d  252 (288)
T 3kfa_A          188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----------EKDYRMERPEGC----PEKVYELMRACWQWN  252 (288)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----------HTTCCCCCCTTC----CHHHHHHHHHHTCSS
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----------hccCCCCCCCCC----CHHHHHHHHHHhCCC
Confidence            46789999999999999999 99898655443332222           111111111222    245679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++.+..+..
T Consensus       253 p~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          253 PSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999998876554

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.40  E-value=2.8e-13  Score=87.03  Aligned_cols=84  Identities=14%  Similarity=0.225  Sum_probs=56.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++|+++|..||............           .....+.....   .....+.+++.+||..+|.
T Consensus       220 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~  285 (319)
T 2y4i_B          220 FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM-----------GTGMKPNLSQI---GMGKEISDILLFCWAFEQE  285 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH-----------HTTCCCCCCCS---SCCTTHHHHHHHHHCSSTT
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh-----------ccCCCCCCCcC---CCCHHHHHHHHHHhcCChh
Confidence            678999999999999999999999755443222111           01111111110   1122466999999999999


Q ss_pred             CCCCHHHHHHHHHHhhhc
Q 039745           83 ERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~~~  100 (127)
                      +||++.++++.+..+...
T Consensus       286 ~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          286 ERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             TSCCHHHHHHHHTTC---
T ss_pred             hCcCHHHHHHHHHHHHHh
Confidence            999999999988765543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.40  E-value=2.7e-13  Score=87.60  Aligned_cols=85  Identities=20%  Similarity=0.339  Sum_probs=60.0

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++||++ |..||...........+           ............    ...+.+|+.+||..+|
T Consensus       218 ~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~dp  282 (327)
T 1fvr_A          218 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----------PQGYRLEKPLNC----DDEVYDLMRQCWREKP  282 (327)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG-----------GGTCCCCCCTTB----CHHHHHHHHHHTCSSG
T ss_pred             CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHh-----------hcCCCCCCCCCC----CHHHHHHHHHHccCCh
Confidence            5778999999999999998 99999655433221111           111111111122    2356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhccc
Q 039745           82 AERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      .+||++.+++.++..+.....
T Consensus       283 ~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          283 YERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             GGSCCHHHHHHHHHHHHHSSS
T ss_pred             hhCcCHHHHHHHHHHHHHhhc
Confidence            999999999999998776543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.40  E-value=3.5e-13  Score=87.31  Aligned_cols=84  Identities=17%  Similarity=0.283  Sum_probs=59.6

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++|+++ |..||...........+.           ..........    ....+.+++.+||..+|
T Consensus       236 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~----~~~~l~~li~~~l~~dp  300 (334)
T 2pvf_A          236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK-----------EGHRMDKPAN----CTNELYMMMRDCWHAVP  300 (334)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-----------HTCCCCCCTT----CCHHHHHHHHHHTCSSG
T ss_pred             cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh-----------cCCCCCCCcc----CCHHHHHHHHHHccCCh
Confidence            5678999999999999999 999986554433322221           0011111112    22356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++++..+....
T Consensus       301 ~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          301 SQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             GGSCCHHHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHhcc
Confidence            99999999999999877644

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.39  E-value=6e-13  Score=85.66  Aligned_cols=83  Identities=16%  Similarity=0.209  Sum_probs=57.8

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++ |..||...........+.   .        ........    .....+.+++.+||..+
T Consensus       216 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~--------~~~~~~~~----~~~~~l~~li~~~l~~d  280 (322)
T 1p4o_A          216 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM---E--------GGLLDKPD----NCPDMLFELMRMCWQYN  280 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH---T--------TCCCCCCT----TCCHHHHHHHHHHTCSS
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH---c--------CCcCCCCC----CCCHHHHHHHHHHcCCC
Confidence            47789999999999999999 888886554333222210   0        00011111    12235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++++.....
T Consensus       281 p~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          281 PKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             GGGSCCHHHHHHHHGGGSC
T ss_pred             cccCcCHHHHHHHHHHhhc
Confidence            9999999999999876544

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.39  E-value=2.1e-13  Score=95.79  Aligned_cols=80  Identities=21%  Similarity=0.378  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|+++|||++|..||.......+...+   ..         .....+..    ....+.+|+.+||..+|
T Consensus       518 ~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i---~~---------~~~~~p~~----~s~~~~~li~~lL~~dP  581 (674)
T 3pfq_A          518 PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI---ME---------HNVAYPKS----MSKEAVAICKGLMTKHP  581 (674)
T ss_dssp             CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HS---------SCCCCCTT----SCHHHHHHHHHHSCSSS
T ss_pred             CCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH---Hh---------CCCCCCcc----CCHHHHHHHHHHccCCH
Confidence            4788999999999999999999999765544332222   00         01111112    22356799999999999


Q ss_pred             CCCCCH-----HHHHHHHHHh
Q 039745           82 AERPSV-----EDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~-----~~~~~~~~~~   97 (127)
                      .+|+++     .++++|.||.
T Consensus       582 ~~R~~~~~~~~~ei~~h~ff~  602 (674)
T 3pfq_A          582 GKRLGCGPEGERDIKEHAFFR  602 (674)
T ss_dssp             TTCTTCSTTHHHHHHSSGGGS
T ss_pred             HHCCCCCCCcHHHHhcCcccc
Confidence            999997     8999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=4.1e-13  Score=88.45  Aligned_cols=84  Identities=19%  Similarity=0.307  Sum_probs=56.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|+++||+++ |.+||...........+.   ..        .....+..    ....+.+++.+||..+
T Consensus       272 ~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~---~~--------~~~~~p~~----~~~~l~~li~~cl~~d  336 (373)
T 3c1x_A          272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---QG--------RRLLQPEY----CPDPLYEVMLKCWHPK  336 (373)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH---TT--------CCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH---cC--------CCCCCCCC----CCHHHHHHHHHHcCCC
Confidence            47889999999999999999 677775433222211110   00        00111111    2235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++++..+...
T Consensus       337 p~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          337 AEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             GGGSCCHHHHHHHHHHHHHT
T ss_pred             hhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999876643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.39  E-value=8.3e-14  Score=88.90  Aligned_cols=92  Identities=13%  Similarity=0.125  Sum_probs=54.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchH----HHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADES----ARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      ++.++||||+|++++++++|..|+.....................    ...........    ......+.+|+.+||.
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~  281 (302)
T 4e5w_A          206 FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP----PNCPDEVYQLMRKCWE  281 (302)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTC
T ss_pred             CCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCC----CCCCHHHHHHHHHHcC
Confidence            456899999999999999998886432211110000000000000    01111111111    2223467799999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhh
Q 039745           79 KNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+|.+||++.++++.+..+.
T Consensus       282 ~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          282 FQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             SSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999887543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.39  E-value=5.3e-12  Score=82.72  Aligned_cols=92  Identities=11%  Similarity=0.046  Sum_probs=58.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++|+.||..... .............   .+..+.++....   ...+..+.+|+..||..+
T Consensus       237 ~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~  310 (364)
T 3op5_A          237 APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRE---NIASLMDKCFPA---ANAPGEIAKYMETVKLLD  310 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHH---CHHHHHHHHSCT---TCCCHHHHHHHHHHHTCC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhh---hHHHHHHHhccc---ccCHHHHHHHHHHHhcCC
Confidence            367899999999999999999999964221 1111111111110   111111111110   011235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++.+.....
T Consensus       311 p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          311 YTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             TTCCCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHH
Confidence            9999999999998876655

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.39  E-value=1.1e-13  Score=87.21  Aligned_cols=81  Identities=12%  Similarity=0.195  Sum_probs=54.8

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHH--HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVD--LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      +.++||||+|++++|+++|..||......  ....+.    .       .........    .....+.+|+.+||..+|
T Consensus       186 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~-------~~~~~~~~~----~~~~~~~~li~~~l~~~p  250 (276)
T 2yex_A          186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----E-------KKTYLNPWK----KIDSAPLALLHKILVENP  250 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH----T-------TCTTSTTGG----GSCHHHHHHHHHHSCSST
T ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh----h-------cccccCchh----hcCHHHHHHHHHHCCCCc
Confidence            46799999999999999999998643321  111111    0       000000111    122356689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.|+...
T Consensus       251 ~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          251 SARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             TTSCCHHHHTTCTTTTCC
T ss_pred             hhCCCHHHHhcCccccCh
Confidence            999999999999886544

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=1.3e-12  Score=84.39  Aligned_cols=89  Identities=24%  Similarity=0.285  Sum_probs=56.6

Q ss_pred             chhHHHHHHHHHHHHhC----------CCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCccc-ccHHHHHHHHHH
Q 039745            6 KIDIYDFGLILLEIIVG----------RPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKA-CLDESLKTMMEV   72 (127)
Q Consensus         6 ~~Diws~G~~~~e~~~g----------~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l   72 (127)
                      ++||||+|+++|||++|          ..||.....  .........       .......+..... ........+.+|
T Consensus       232 ~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~l  304 (337)
T 3mdy_A          232 MADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREI-------VCIKKLRPSFPNRWSSDECLRQMGKL  304 (337)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH-------HTTSCCCCCCCGGGGGSHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHH-------HhhhccCccccccchhhHHHHHHHHH
Confidence            38999999999999999          556532110  000111100       0001111222211 123566778899


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           73 CVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        73 ~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +.+||..+|.+||++.++++++..+....
T Consensus       305 i~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          305 MTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            99999999999999999999998776644

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.39  E-value=3.2e-13  Score=86.09  Aligned_cols=92  Identities=21%  Similarity=0.296  Sum_probs=56.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||............  .............++.....+    ...+.+++.+||..+|
T Consensus       203 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp  276 (303)
T 2vwi_A          203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT--LQNDPPSLETGVQDKEMLKKY----GKSFRKMISLCLQKDP  276 (303)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH--HTSSCCCTTC-----CCCCCC----CHHHHHHHHHHCCSSG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH--hccCCCccccccccchhhhhh----hHHHHHHHHHHccCCh
Confidence            3678999999999999999999998654332221111  000000000000111111112    2356789999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|.|+...
T Consensus       277 ~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          277 EKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             GGSCCHHHHHTSTTC---
T ss_pred             hhCcCHHHHhhChhhhcC
Confidence            999999999999887543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.38  E-value=2.1e-12  Score=85.48  Aligned_cols=83  Identities=19%  Similarity=0.180  Sum_probs=56.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.++||||+||++|||++|..||..........+......         .....+...    ...+.+|+.+||..+|.
T Consensus       194 ~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~---------~~~~~p~~~----s~~~~~li~~lL~~dP~  260 (384)
T 4fr4_A          194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET---------TVVTYPSAW----SQEMVSLLKKLLEPNPD  260 (384)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH---------CCCCCCTTS----CHHHHHHHHHHSCSSGG
T ss_pred             CCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh---------cccCCCCcC----CHHHHHHHHHHhcCCHh
Confidence            77899999999999999999999964322222222211110         011111122    23567999999999999


Q ss_pred             CCCC-HHHHHHHHHHhh
Q 039745           83 ERPS-VEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~-~~~~~~~~~~~~   98 (127)
                      +||+ +.+++.|.|+..
T Consensus       261 ~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          261 QRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             GSCCSHHHHHTSGGGTT
T ss_pred             HhcccHHHHHcChhhhc
Confidence            9998 889999888744

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.38  E-value=9.7e-13  Score=85.83  Aligned_cols=93  Identities=15%  Similarity=0.101  Sum_probs=59.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh--HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++|+.||....  ..............    ..........   .......+.+|+.+||..
T Consensus       244 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~l~~li~~~l~~  316 (352)
T 2jii_A          244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDK----PGPFVGPCGH---WIRPSETLQKYLKVVMAL  316 (352)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHS----CCCEECTTSC---EECCCHHHHHHHHHHHTC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCC----hhhhhhhccc---cCCCcHHHHHHHHHHHhC
Confidence            46789999999999999999999996432  22221111100000    0011111100   001124567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.++++.+..+....
T Consensus       317 dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          317 TYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             CTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ChhhCCCHHHHHHHHHHHHHhc
Confidence            9999999999999988766544

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.38  E-value=3e-13  Score=88.26  Aligned_cols=84  Identities=17%  Similarity=0.228  Sum_probs=55.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH------HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD------LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVR   75 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   75 (127)
                      .|+.++|+||+||+++||++|+.||......      ....+.....       .  .....+...    ...+.+|+.+
T Consensus       186 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~-------~--~~~~~p~~~----s~~~~~li~~  252 (345)
T 3a8x_A          186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-------E--KQIRIPRSL----SVKAASVLKS  252 (345)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHH-------H--CCCCCCTTS----CHHHHHHHHH
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHH-------c--CCCCCCCCC----CHHHHHHHHH
Confidence            4678999999999999999999998532110      0001110000       0  011122222    2356799999


Q ss_pred             hcccCCCCCCCH------HHHHHHHHHhh
Q 039745           76 CLLKNPAERPSV------EDVLWNLQFAA   98 (127)
Q Consensus        76 cl~~~p~~Rp~~------~~~~~~~~~~~   98 (127)
                      ||..+|.+|+++      .+++.|+||..
T Consensus       253 lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          253 FLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             HTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             HhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            999999999985      89999999753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=3e-13  Score=88.47  Aligned_cols=83  Identities=14%  Similarity=0.318  Sum_probs=55.6

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++||++|+.||..... .....+......         ..+......    ...+.+|+.+||..+|
T Consensus       239 ~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~~~~li~~~L~~dP  305 (355)
T 1vzo_A          239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK---------SEPPYPQEM----SALAKDLIQRLLMKDP  305 (355)
T ss_dssp             -CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH---------CCCCCCTTS----CHHHHHHHHHHTCSSG
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc---------cCCCCCccc----CHHHHHHHHHHhhhCH
Confidence            57889999999999999999999853221 111111110000         111122222    2356689999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+||     ++.++++|+++..
T Consensus       306 ~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          306 KKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             GGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHhcCCCCCCHHHHHcCcchhc
Confidence            9999     9999999999764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.38  E-value=2.7e-13  Score=87.56  Aligned_cols=84  Identities=19%  Similarity=0.195  Sum_probs=55.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++|..||.......   +..           ...........    ...+.+|+.+||..+|
T Consensus       229 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~~~-----------~~~~~~~~~~~----~~~~~~li~~~l~~~p  290 (337)
T 3ll6_A          229 PIGEKQDIWALGCILYLLCFRQHPFEDGAKLR---IVN-----------GKYSIPPHDTQ----YTVFHSLIRAMLQVNP  290 (337)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHSSCCC--------------------------CCCCTTCCS----SGGGHHHHHHHSCSSG
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---hhc-----------CcccCCccccc----chHHHHHHHHHccCCh
Confidence            35679999999999999999999985432211   110           00000011111    1235689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcccc
Q 039745           82 AERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      .+||++.++++++..+......
T Consensus       291 ~~Rps~~e~l~~l~~~~~~~~~  312 (337)
T 3ll6_A          291 EERLSIAEVVHQLQEIAAARNV  312 (337)
T ss_dssp             GGSCCHHHHHHHHHHHHHHTTC
T ss_pred             hhCcCHHHHHHHHHHHHhccCC
Confidence            9999999999999987765443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.38  E-value=8.1e-13  Score=84.64  Aligned_cols=83  Identities=13%  Similarity=0.267  Sum_probs=57.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++ |..||..... .......           ...........    ....+.+++.+||..
T Consensus       223 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~l~~li~~~l~~  287 (313)
T 1t46_A          223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI-----------KEGFRMLSPEH----APAEMYDIMKTCWDA  287 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH-----------HHTCCCCCCTT----SCHHHHHHHHHHTCS
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh-----------ccCCCCCCccc----CCHHHHHHHHHHcCC
Confidence            46789999999999999998 9999864332 2121111           11111111111    223567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.++++++.....
T Consensus       288 dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          288 DPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             CchhCcCHHHHHHHHHHHHH
Confidence            99999999999999987654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.38  E-value=5.9e-13  Score=85.52  Aligned_cols=84  Identities=11%  Similarity=0.227  Sum_probs=56.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH--HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD--LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      ++.++||||+|++++|+++|+.||......  ......           .........    ......+.+++.+||..+
T Consensus       223 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~l~~li~~~l~~d  287 (317)
T 2buj_A          223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV-----------QNQLSIPQS----PRHSSALWQLLNSMMTVD  287 (317)
T ss_dssp             ECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-----------HCC--CCCC----TTSCHHHHHHHHHHTCSS
T ss_pred             CCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh-----------hccCCCCcc----ccCCHHHHHHHHHHhhcC
Confidence            577999999999999999999998532110  111111           000001111    112235779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhcc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      |.+||++.++++++..+....
T Consensus       288 p~~Rps~~~ll~~L~~~~~~~  308 (317)
T 2buj_A          288 PHQRPHIPLLLSQLEALQPPA  308 (317)
T ss_dssp             GGGSCCHHHHHHHHHHTCCCC
T ss_pred             hhhCCCHHHHHHHhhhcCCCC
Confidence            999999999999998665433

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.37  E-value=1.1e-12  Score=84.95  Aligned_cols=89  Identities=19%  Similarity=0.229  Sum_probs=57.9

Q ss_pred             CchhHHHHHHHHHHHHhC----------CCCCCchhH--HHHHHHHHHHHhhchHHHhhhcCCcCcccc-cHHHHHHHHH
Q 039745            5 DKIDIYDFGLILLEIIVG----------RPLKSRKEV--DLLKNQLQAVITADESARRSMVDPAVNKAC-LDESLKTMME   71 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g----------~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   71 (127)
                      .++||||+|++++||++|          ..||.....  .....+...       .......+...... .......+.+
T Consensus       236 ~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~  308 (342)
T 1b6c_B          236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV-------VCEQKLRPNIPNRWQSCEALRVMAK  308 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH-------HTTSCCCCCCCGGGGTSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHH-------HHHHHhCCCCcccccchhHHHHHHH
Confidence            579999999999999998          667643211  001111110       01111222222211 2355667889


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           72 VCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        72 l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |+.+||..+|.+||++.++++++..+...
T Consensus       309 li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          309 IMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999877654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.37  E-value=4.8e-14  Score=93.97  Aligned_cols=76  Identities=9%  Similarity=0.019  Sum_probs=54.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.++||||+||++|||++|+.||.........              .......  ...    +..+.+|+.+||..+|.
T Consensus       294 ~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~--------------~~~~~~~--~~~----~~~~~~li~~~l~~dP~  353 (413)
T 3dzo_A          294 MTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS--------------EWIFRSC--KNI----PQPVRALLEGFLRYPKE  353 (413)
T ss_dssp             ECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS--------------GGGGSSC--CCC----CHHHHHHHHHHTCSSGG
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH--------------HHHHhhc--ccC----CHHHHHHHHHHccCChh
Confidence            566999999999999999999999654322110              0111100  011    23577999999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      +||++.++++|.++..
T Consensus       354 ~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          354 DRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             GSCCHHHHTTSHHHHH
T ss_pred             hCcCHHHHHhCHHHHH
Confidence            9999999999887643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.37  E-value=8.6e-13  Score=83.37  Aligned_cols=83  Identities=18%  Similarity=0.248  Sum_probs=57.3

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++||++ |..||...........+           ...........    ....+.+++.+||..+|
T Consensus       187 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~l~~li~~~l~~~p  251 (279)
T 1qpc_A          187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPDN----CPEELYQLMRLCWKERP  251 (279)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-----------HTTCCCCCCTT----CCHHHHHHHHHHTCSSG
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHH-----------hcccCCCCccc----ccHHHHHHHHHHhccCh
Confidence            5678999999999999999 88898654433222111           11111111112    22456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.+++..+..+...
T Consensus       252 ~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          252 EDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             GGSCCHHHHHHHHHHHHHH
T ss_pred             hhCCCHHHHHHHHHHHHHh
Confidence            9999999999988766543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.37  E-value=5.9e-13  Score=84.49  Aligned_cols=83  Identities=17%  Similarity=0.222  Sum_probs=56.6

Q ss_pred             CCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+|++++++++ |..||...........+   ..       .........    .....+.+++.+||..+|
T Consensus       201 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~-------~~~~~~~~~----~~~~~l~~li~~~l~~~p  266 (291)
T 1u46_A          201 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DK-------EGERLPRPE----DCPQDIYNVMVQCWAHKP  266 (291)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HT-------SCCCCCCCT----TCCHHHHHHHHHHTCSSG
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHH---Hc-------cCCCCCCCc----CcCHHHHHHHHHHccCCc
Confidence            4568999999999999999 99998655433222111   00       000111111    223457799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++++.....
T Consensus       267 ~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          267 EDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             GGSCCHHHHHHHHHHHC-
T ss_pred             ccCcCHHHHHHHHHHhCc
Confidence            999999999998876543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.37  E-value=3.7e-13  Score=89.34  Aligned_cols=84  Identities=17%  Similarity=0.215  Sum_probs=55.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH------HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL------LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVR   75 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   75 (127)
                      .|+.++|+||+|++++||++|+.||.......      ...+......         .....+...    ...+.+|+.+
T Consensus       229 ~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~---------~~~~~p~~~----s~~~~~li~~  295 (396)
T 4dc2_A          229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---------KQIRIPRSL----SVKAASVLKS  295 (396)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH---------CCCCCCTTS----CHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc---------cccCCCCcC----CHHHHHHHHH
Confidence            47789999999999999999999995321100      0011100000         111122222    2356699999


Q ss_pred             hcccCCCCCCCH------HHHHHHHHHhh
Q 039745           76 CLLKNPAERPSV------EDVLWNLQFAA   98 (127)
Q Consensus        76 cl~~~p~~Rp~~------~~~~~~~~~~~   98 (127)
                      ||..+|.+|+++      .+++.|+||..
T Consensus       296 lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          296 FLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             HTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             HhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence            999999999985      79999999753

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.37  E-value=1.5e-12  Score=82.86  Aligned_cols=84  Identities=18%  Similarity=0.309  Sum_probs=56.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCC-CCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|+++++|++|..| +...........+.           ...........    ...+.+++..||..+
T Consensus       204 ~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~l~~li~~~l~~~  268 (298)
T 3pls_A          204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-----------QGRRLPQPEYC----PDSLYQVMQQCWEAD  268 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-----------TTCCCCCCTTC----CHHHHHHHHHHTCSS
T ss_pred             CCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-----------cCCCCCCCccc----hHHHHHHHHHHccCC
Confidence            467899999999999999995555 54433332222221           11111111112    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.++++.+..+...
T Consensus       269 p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          269 PAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHHH
Confidence            99999999999998876553

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.36  E-value=8.2e-13  Score=85.42  Aligned_cols=83  Identities=20%  Similarity=0.267  Sum_probs=56.9

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      .++.++||||+|++++||++ |..||..... ........           ...........    ...+.+++..||..
T Consensus       242 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~l~~li~~~l~~  306 (333)
T 2i1m_A          242 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK-----------DGYQMAQPAFA----PKNIYSIMQACWAL  306 (333)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH-----------HTCCCCCCTTC----CHHHHHHHHHHTCS
T ss_pred             CCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh-----------cCCCCCCCCCC----CHHHHHHHHHHhcc
Confidence            47789999999999999998 8889864332 21211111           11111111111    23567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.+++.++.....
T Consensus       307 ~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          307 EPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHHHHHHHHHH
Confidence            99999999999998886554

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.36  E-value=1.3e-12  Score=83.81  Aligned_cols=86  Identities=20%  Similarity=0.288  Sum_probs=55.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++|+++|+.||...........+.   ..       ...+   ..........+.+++.+||..+|
T Consensus       211 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~-------~~~~---~~~~~~~~~~l~~li~~~l~~dP  277 (309)
T 2h34_A          211 HATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN---QA-------IPRP---STVRPGIPVAFDAVIARGMAKNP  277 (309)
T ss_dssp             ---CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH---SC-------CCCG---GGTSTTCCTHHHHHHHHHTCSSG
T ss_pred             CCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc---cC-------CCCc---cccCCCCCHHHHHHHHHhccCCH
Confidence            35779999999999999999999997655433222220   00       0000   01111122356689999999999


Q ss_pred             CCCC-CHHHHHHHHHHhhhc
Q 039745           82 AERP-SVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp-~~~~~~~~~~~~~~~  100 (127)
                      .+|| ++.+++..+......
T Consensus       278 ~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          278 EDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             GGSCSSHHHHHHHHHHTCC-
T ss_pred             HHHHHhHHHHHHHHHHHHHh
Confidence            9999 899999888765443

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.36  E-value=3.1e-13  Score=87.82  Aligned_cols=89  Identities=26%  Similarity=0.207  Sum_probs=54.6

Q ss_pred             chhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhh----hcCCcCc---ccccHHHHHHHHHHHHHhc
Q 039745            6 KIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRS----MVDPAVN---KACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         6 ~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~l~~~cl   77 (127)
                      ++||||+|++++|+++|..||..... ......+   ..... ..+.    ...+...   ..........+.+|+.+||
T Consensus       232 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  307 (348)
T 2pml_X          232 KVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI---RTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFL  307 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHH---TSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH---hccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHc
Confidence            89999999999999999999964432 2221111   00000 0000    0000000   0000122346779999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhh
Q 039745           78 LKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ..+|.+||++.++++|.|+..
T Consensus       308 ~~dP~~Rps~~e~l~hp~f~~  328 (348)
T 2pml_X          308 RKNPAERITSEDALKHEWLAD  328 (348)
T ss_dssp             CSSGGGSCCHHHHHTSGGGTT
T ss_pred             cCChhhCCCHHHHhcCccccC
Confidence            999999999999999998754

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.35  E-value=4.3e-13  Score=88.39  Aligned_cols=80  Identities=13%  Similarity=0.219  Sum_probs=56.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++|+||+|+++|||++|..||...........+.   .       .  ........    ...+.+|+.+||..+|
T Consensus       215 ~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~---~-------~--~~~~~~~~----~~~~~~li~~lL~~dp  278 (373)
T 2r5t_A          215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL---N-------K--PLQLKPNI----TNSARHLLEGLLQKDR  278 (373)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH---H-------S--CCCCCSSS----CHHHHHHHHHHTCSSG
T ss_pred             CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---h-------c--ccCCCCCC----CHHHHHHHHHHcccCH
Confidence            47889999999999999999999996555433322220   0       0  01111122    2356699999999999


Q ss_pred             CCCCCH----HHHHHHHHHh
Q 039745           82 AERPSV----EDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~----~~~~~~~~~~   97 (127)
                      .+|+++    .+++.|.||.
T Consensus       279 ~~R~~~~~~~~~i~~h~~f~  298 (373)
T 2r5t_A          279 TKRLGAKDDFMEIKSHVFFS  298 (373)
T ss_dssp             GGSTTTTTTHHHHHTSGGGT
T ss_pred             HhCCCCCCCHHHHhCCcccc
Confidence            999986    6888888864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.34  E-value=8e-13  Score=83.54  Aligned_cols=81  Identities=20%  Similarity=0.307  Sum_probs=55.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|+++++|++|..|+....     ....        .+   .........+    ..+.+++.+||..+|
T Consensus       197 ~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~--------~~---~~~~~~~~~~----~~~~~li~~~l~~dp  256 (284)
T 2a19_B          197 DYGKEVDLYALGLILAELLHVCDTAFETS-----KFFT--------DL---RDGIISDIFD----KKEKTLLQKLLSKKP  256 (284)
T ss_dssp             CCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----HHHH--------HH---HTTCCCTTSC----HHHHHHHHHHTCSSG
T ss_pred             CCcchhhhHHHHHHHHHHHhcCCcchhHH-----HHHH--------Hh---hcccccccCC----HHHHHHHHHHccCCh
Confidence            46789999999999999999988763211     1110        00   0111111222    245689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhccc
Q 039745           82 AERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      .+||++.+++++++.+.....
T Consensus       257 ~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          257 EDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             GGSCCHHHHHHHHHHHTC---
T ss_pred             hhCcCHHHHHHHHHHHhhCCC
Confidence            999999999999998776544

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.34  E-value=3.4e-13  Score=89.87  Aligned_cols=84  Identities=18%  Similarity=0.233  Sum_probs=57.2

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.++||||+|+++|||++|..||...........+.   ..    ......+.. ...    ...+.+|+.+||..+|.
T Consensus       250 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~---~~----~~~~~~p~~-~~~----s~~~~~li~~lL~~~~~  317 (410)
T 3v8s_A          250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM---NH----KNSLTFPDD-NDI----SKEAKNLICAFLTDREV  317 (410)
T ss_dssp             EETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---TH----HHHCCCCTT-CCC----CHHHHHHHHHHSSCGGG
T ss_pred             CCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHH---hc----cccccCCCc-ccc----cHHHHHHHHHHccChhh
Confidence            6789999999999999999999997554433322221   00    001111111 111    23566999999998888


Q ss_pred             C--CCCHHHHHHHHHHhh
Q 039745           83 E--RPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~--Rp~~~~~~~~~~~~~   98 (127)
                      +  |+++.++++|+||..
T Consensus       318 rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          318 RLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             CTTSSCHHHHHTSGGGCC
T ss_pred             hCCCCCHHHHhcCccccC
Confidence            8  999999999999854

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.33  E-value=6.7e-14  Score=89.16  Aligned_cols=90  Identities=20%  Similarity=0.147  Sum_probs=56.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|+++|||++|+.||....... +....       . ....  .+.............+.+|+.+||..|
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~-------~-~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~d  247 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE-------R-DTAG--QPIEPADIDRDIPFQISAVAARSVQGD  247 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC-------B-CTTS--CBCCHHHHCTTSCHHHHHHHHHHHCTT
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH-------H-Hhcc--CCCChhhcccCCCHHHHHHHHHHcccC
Confidence            36789999999999999999999986433210 00000       0 0000  000000011112335779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhccc
Q 039745           81 PAERPSVEDVLWNLQFAAQVQD  102 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~~~  102 (127)
                      |.+| ++.++++.+........
T Consensus       248 P~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          248 GGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             SSCC-CHHHHHHHHHHHHC---
T ss_pred             CccC-CHHHHHHHHHHHhccCC
Confidence            9999 99999999987665443

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.33  E-value=4.3e-13  Score=87.12  Aligned_cols=73  Identities=12%  Similarity=0.210  Sum_probs=53.8

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|+++++|++|..||......                ......  .+...    ...+.+|+.+||..+|.+
T Consensus       208 ~~~~DiwslG~il~el~~g~~pf~~~~~~----------------~~~~~~--~~~~~----~~~l~~li~~~L~~dP~~  265 (335)
T 3dls_A          208 GPELEMWSLGVTLYTLVFEENPFCELEET----------------VEAAIH--PPYLV----SKELMSLVSGLLQPVPER  265 (335)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------TTTCCC--CSSCC----CHHHHHHHHHHTCSSGGG
T ss_pred             CCcccchhHHHHHHHHHhCCCchhhHHHH----------------HhhccC--CCccc----CHHHHHHHHHHccCChhh
Confidence            67899999999999999999998642211                000010  11111    235679999999999999


Q ss_pred             CCCHHHHHHHHHHhh
Q 039745           84 RPSVEDVLWNLQFAA   98 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~   98 (127)
                      ||++.++++|+|+..
T Consensus       266 Rps~~ell~hp~~~~  280 (335)
T 3dls_A          266 RTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             SCCHHHHHHCTTTTC
T ss_pred             CcCHHHHhcCccccC
Confidence            999999999999754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.33  E-value=7.5e-13  Score=85.31  Aligned_cols=78  Identities=23%  Similarity=0.401  Sum_probs=52.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++|+++|..++....     ....        .......+    .........+.+|+.+||..+|
T Consensus       252 ~~~~~~Di~slG~il~el~~~~~~~~~~~-----~~~~--------~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p  314 (332)
T 3qd2_B          252 NYSHKVDIFSLGLILFELLYSFSTQMERV-----RIIT--------DVRNLKFP----LLFTQKYPQEHMMVQDMLSPSP  314 (332)
T ss_dssp             CCCTHHHHHHHHHHHHHHHSCCCCHHHHH-----HHHH--------HHHTTCCC----HHHHHHCHHHHHHHHHHHCSSG
T ss_pred             CCcchhhHHHHHHHHHHHHHcCCChhHHH-----HHHH--------HhhccCCC----cccccCChhHHHHHHHHccCCC
Confidence            47889999999999999999876542111     1110        00011111    1112233456799999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQF   96 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~   96 (127)
                      .+||++.++++|.|+
T Consensus       315 ~~Rps~~~~l~~~~f  329 (332)
T 3qd2_B          315 TERPEATDIIENAIF  329 (332)
T ss_dssp             GGSCCHHHHHHSTTC
T ss_pred             CcCCCHHHHhhchhh
Confidence            999999999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.33  E-value=2.6e-12  Score=81.87  Aligned_cols=83  Identities=20%  Similarity=0.338  Sum_probs=55.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++++++ +.+|+............           ............    ...+.+++.+||..+
T Consensus       208 ~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~~l~~~  272 (298)
T 3f66_A          208 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-----------LQGRRLLQPEYC----PDPLYEVMLKCWHPK  272 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH-----------HTTCCCCCCTTC----CHHHHHHHHHHTCSS
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH-----------hcCCCCCCCccC----CHHHHHHHHHHcCCC
Confidence            46789999999999999999 55566443322221111           000011111112    235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++.+..+..
T Consensus       273 p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          273 AEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999998887654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.32  E-value=1.2e-12  Score=83.37  Aligned_cols=83  Identities=24%  Similarity=0.318  Sum_probs=53.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++||++   |+......  .....        .+.. .....+..........+.+++.+||..+|
T Consensus       207 ~~~~~~Di~slG~il~~l~~---p~~~~~~~--~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp  272 (303)
T 1zy4_A          207 HYNEKIDMYSLGIIFFEMIY---PFSTGMER--VNILK--------KLRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDP  272 (303)
T ss_dssp             CCCTHHHHHHHHHHHHHHHS---CCSSHHHH--HHHHH--------HHHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSG
T ss_pred             CCcchhhHHHHHHHHHHHHh---ccCCchhH--HHHHH--------hccc-cccccCccccccchHHHHHHHHHHHhcCc
Confidence            57889999999999999998   44322111  11111        0111 01111111222233456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|+|+..
T Consensus       273 ~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          273 NKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             GGSCCHHHHHHSSCSCC
T ss_pred             ccCcCHHHHhCCCCcCC
Confidence            99999999999998754

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.31  E-value=1.4e-13  Score=88.79  Aligned_cols=74  Identities=14%  Similarity=0.277  Sum_probs=54.1

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCC
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAE   83 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~   83 (127)
                      +.++||||+|++++|+++|+.||.....     ..         .. .   .......    ...+.+|+.+||..+|.+
T Consensus       227 ~~~~Di~slG~il~el~~g~~pf~~~~~-----~~---------~~-~---~~~~~~~----~~~~~~li~~~l~~dp~~  284 (320)
T 3a99_A          227 GRSAAVWSLGILLYDMVCGDIPFEHDEE-----II---------RG-Q---VFFRQRV----SSECQHLIRWCLALRPSD  284 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH---------HC-C---CCCSSCC----CHHHHHHHHHHTCSSGGG
T ss_pred             CccchHHhHHHHHHHHHHCCCCCCChhh-----hh---------cc-c---ccccccC----CHHHHHHHHHHccCChhh
Confidence            5678999999999999999999864321     11         00 0   0111112    235669999999999999


Q ss_pred             CCCHHHHHHHHHHhhh
Q 039745           84 RPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        84 Rp~~~~~~~~~~~~~~   99 (127)
                      ||++.++++|.|+...
T Consensus       285 Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          285 RPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             SCCHHHHHTSGGGSSC
T ss_pred             CcCHHHHhcCHhhcCc
Confidence            9999999999987554

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.31  E-value=2.8e-12  Score=89.96  Aligned_cols=84  Identities=14%  Similarity=0.274  Sum_probs=58.6

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+|++++||++ |..||...........+.           ..........    ....+.+|+.+||..+
T Consensus       568 ~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~-----------~~~~~~~~~~----~~~~l~~li~~~l~~d  632 (656)
T 2j0j_A          568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-----------NGERLPMPPN----CPPTLYSLMTKCWAYD  632 (656)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-----------HTCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-----------cCCCCCCCcc----ccHHHHHHHHHHcCCC
Confidence            47789999999999999997 899986544332221110           1011111122    2345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhhc
Q 039745           81 PAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      |.+||++.+++..+..+...
T Consensus       633 P~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          633 PSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHHHH
Confidence            99999999999998876543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.31  E-value=5.5e-13  Score=86.15  Aligned_cols=93  Identities=13%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHH-----HHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQL-----QAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      ++.++||||+|++++|+++|..|+............     ..........+..-.......    .....+.+++.+||
T Consensus       225 ~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl  300 (326)
T 2w1i_A          225 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECW  300 (326)
T ss_dssp             EEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCT----TCCHHHHHHHHHHS
T ss_pred             CCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCC----cccHHHHHHHHHHc
Confidence            466899999999999999999887543221111000     000000000111111111112    22346779999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHhhh
Q 039745           78 LKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        78 ~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ..+|.+||++.++++.+..+..
T Consensus       301 ~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          301 NNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999998876653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.31  E-value=2.5e-12  Score=86.39  Aligned_cols=85  Identities=11%  Similarity=0.166  Sum_probs=57.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||+++||++|+.||........ ..+...        ......|......+    ..+.+|+.+||..+
T Consensus       257 ~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--------~~~~~~p~~~~~~s----~~~~dLi~~lL~~~  324 (437)
T 4aw2_A          257 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH--------KERFQFPTQVTDVS----ENAKDLIRRLICSR  324 (437)
T ss_dssp             EECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH--------HHHCCCCSSCCCSC----HHHHHHHHTTSSCG
T ss_pred             CCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhc--------cccccCCcccccCC----HHHHHHHHHHhccc
Confidence            478899999999999999999999965543332 222210        01111122111122    35668999999887


Q ss_pred             CCC--CCCHHHHHHHHHHhh
Q 039745           81 PAE--RPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~--Rp~~~~~~~~~~~~~   98 (127)
                      +.+  |+++.++++|+||..
T Consensus       325 ~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          325 EHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             GGCTTTTTTHHHHTSGGGTT
T ss_pred             ccccCCCCHHHHhCCCccCC
Confidence            777  999999999999853

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.30  E-value=6.5e-13  Score=85.18  Aligned_cols=86  Identities=21%  Similarity=0.305  Sum_probs=55.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++|+++|..|+............     ...........+..        ...+.+++.+||..+|
T Consensus       198 ~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--------~~~l~~li~~~l~~dP  264 (310)
T 3s95_A          198 SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL-----NVRGFLDRYCPPNC--------PPSFFPITVRCCDLDP  264 (310)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB-----CHHHHHHHTCCTTC--------CTTHHHHHHHHTCSSG
T ss_pred             CCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh-----hhhccccccCCCCC--------CHHHHHHHHHHccCCh
Confidence            4678999999999999999999887432111000000     00001111111111        1245689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhc
Q 039745           82 AERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+||++.++++.+..+...
T Consensus       265 ~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          265 EKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             GGSCCHHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHHh
Confidence            9999999999988876543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.30  E-value=6e-13  Score=91.92  Aligned_cols=81  Identities=21%  Similarity=0.304  Sum_probs=56.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH----HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV----DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCL   77 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl   77 (127)
                      .|+.++||||+||+++||++|..||.....    ......+   ..         .........    ...+.+|+.+||
T Consensus       361 ~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i---~~---------~~~~~p~~~----s~~~~dLI~~lL  424 (576)
T 2acx_A          361 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV---KE---------VPEEYSERF----SPQARSLCSQLL  424 (576)
T ss_dssp             EESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH---HH---------CCCCCCTTS----CHHHHHHHHHHT
T ss_pred             CCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh---hc---------ccccCCccC----CHHHHHHHHHhc
Confidence            367899999999999999999999964321    1111111   00         111122222    235679999999


Q ss_pred             ccCCCCCC-----CHHHHHHHHHHhh
Q 039745           78 LKNPAERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        78 ~~~p~~Rp-----~~~~~~~~~~~~~   98 (127)
                      ..+|.+|+     ++.++++|.||..
T Consensus       425 ~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          425 CKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             CSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             cCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            99999999     7899999999864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.30  E-value=1.8e-12  Score=81.90  Aligned_cols=78  Identities=15%  Similarity=0.185  Sum_probs=52.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|++++++++|.+++.....  ...+.            .-..+......+    ..+.+|+.+||..+|.
T Consensus       208 ~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~------------~~~~~~~~~~~~----~~~~~li~~~l~~dp~  269 (289)
T 1x8b_A          208 HLPKADIFALALTVVCAAGAEPLPRNGDQ--WHEIR------------QGRLPRIPQVLS----QEFTELLKVMIHPDPE  269 (289)
T ss_dssp             THHHHHHHHHHHHHHHHTTCCCCCSSSHH--HHHHH------------TTCCCCCSSCCC----HHHHHHHHHHTCSSGG
T ss_pred             CCchhhHHHHHHHHHHHhcCCCCCcchhH--HHHHH------------cCCCCCCCcccC----HHHHHHHHHHhCCCcc
Confidence            44689999999999999999877643321  11111            111122222222    3567999999999999


Q ss_pred             CCCCHHHHHHHHHHhh
Q 039745           83 ERPSVEDVLWNLQFAA   98 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~~   98 (127)
                      +||++.++++|+|+..
T Consensus       270 ~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          270 RRPSAMALVKHSVLLS  285 (289)
T ss_dssp             GSCCHHHHHTCTTC--
T ss_pred             cCCCHHHHhhChHhhh
Confidence            9999999999998654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.29  E-value=5.9e-12  Score=83.44  Aligned_cols=97  Identities=9%  Similarity=0.018  Sum_probs=60.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchh--HHHHHHHHHHHHhhchHHHhhhc-----------CCcCcccccHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKE--VDLLKNQLQAVITADESARRSMV-----------DPAVNKACLDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~   69 (127)
                      ++.++||||+|+++|||++|+.||....  ......+.......+......+.           ...............+
T Consensus       200 ~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l  279 (396)
T 4eut_A          200 YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLL  279 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhc
Confidence            3568999999999999999999984211  11111111111111110000000           0011112335666788


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+++.+||..||.+|+++.++++.+..+..
T Consensus       280 ~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          280 TPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             HHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             hHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            899999999999999999999998887665

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.29  E-value=6.2e-12  Score=80.22  Aligned_cols=86  Identities=21%  Similarity=0.354  Sum_probs=54.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .++.++||||+|++++++++|+.||............  ....        . +..........+..+.+++.+||..+|
T Consensus       188 ~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~--~~~~--------~-~~~~~~~~~~~~~~l~~li~~~l~~dp  256 (294)
T 4eqm_A          188 ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH--IQDS--------V-PNVTTDVRKDIPQSLSNVILRATEKDK  256 (294)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH--HSSC--------C-CCHHHHSCTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--hhcc--------C-CCcchhcccCCCHHHHHHHHHHhcCCH
Confidence            4678899999999999999999999654432221110  0000        0 111001111123456799999999999


Q ss_pred             CCCC-CHHHHHHHHHHhh
Q 039745           82 AERP-SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-~~~~~~~~~~~~~   98 (127)
                      .+|| +++++...+....
T Consensus       257 ~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          257 ANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             GGSCSSHHHHHHHHHTSS
T ss_pred             hHccccHHHHHHHHHHHH
Confidence            9998 6777766665443

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.29  E-value=3.6e-12  Score=85.01  Aligned_cols=84  Identities=14%  Similarity=0.170  Sum_probs=56.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHH-HHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLK-NQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||++|||++|+.||......... .+...        ......+......    ...+.+|+.+||. +
T Consensus       246 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--------~~~~~~p~~~~~~----s~~~~dli~~lL~-~  312 (412)
T 2vd5_A          246 SYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY--------KEHLSLPLVDEGV----PEEARDFIQRLLC-P  312 (412)
T ss_dssp             EECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH--------HHHCCCC----CC----CHHHHHHHHTTSS-C
T ss_pred             CCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhc--------ccCcCCCccccCC----CHHHHHHHHHHcC-C
Confidence            3788999999999999999999999655443322 22210        0011111111112    2356799999999 9


Q ss_pred             CCCC---CCHHHHHHHHHHhh
Q 039745           81 PAER---PSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~R---p~~~~~~~~~~~~~   98 (127)
                      |.+|   +++.+++.|.||..
T Consensus       313 p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          313 PETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             GGGCTTTTTHHHHHTSGGGTT
T ss_pred             hhhcCCCCCHHHHhcCCCcCC
Confidence            9888   58999999999853

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.28  E-value=6e-13  Score=85.36  Aligned_cols=74  Identities=19%  Similarity=0.384  Sum_probs=53.1

Q ss_pred             CchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCCCC
Q 039745            5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAER   84 (127)
Q Consensus         5 ~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R   84 (127)
                      .++||||+|++++|+++|+.||.....     +..           .  ........    ...+.+|+.+||..+|.+|
T Consensus       218 ~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~-----------~--~~~~~~~~----~~~~~~li~~~l~~~p~~R  275 (312)
T 2iwi_A          218 LPATVWSLGILLYDMVCGDIPFERDQE-----ILE-----------A--ELHFPAHV----SPDCCALIRRCLAPKPSSR  275 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCCSHHH-----HHH-----------T--CCCCCTTS----CHHHHHHHHHHTCSSTTTS
T ss_pred             ccchHHHHHHHHHHHHHCCCCCCChHH-----Hhh-----------h--ccCCcccC----CHHHHHHHHHHccCChhhC
Confidence            479999999999999999999864321     110           0  01111112    2356799999999999999


Q ss_pred             CCHHHHHHHHHHhhhc
Q 039745           85 PSVEDVLWNLQFAAQV  100 (127)
Q Consensus        85 p~~~~~~~~~~~~~~~  100 (127)
                      |++.++++|.|+....
T Consensus       276 ps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          276 PSLEEILLDPWMQTPA  291 (312)
T ss_dssp             CCHHHHHHSTTTCC--
T ss_pred             cCHHHHhcChhhcCch
Confidence            9999999999875543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.28  E-value=3.1e-12  Score=82.74  Aligned_cols=100  Identities=15%  Similarity=0.153  Sum_probs=58.2

Q ss_pred             CCchhHHHHHHHHHHHHhCCCCCCc-hhHHHHH-HHHHHHHh-hchHHH-----hhhcCCcCcccc--cHHHHHHHHHHH
Q 039745            4 EDKIDIYDFGLILLEIIVGRPLKSR-KEVDLLK-NQLQAVIT-ADESAR-----RSMVDPAVNKAC--LDESLKTMMEVC   73 (127)
Q Consensus         4 ~~~~Diws~G~~~~e~~~g~~p~~~-~~~~~~~-~~~~~~~~-~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~l~   73 (127)
                      +.++||||+|++++||++|..|+.. ....... .+...... ......     .....+......  .......+.+|+
T Consensus       213 ~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  292 (336)
T 3g2f_A          213 LKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETI  292 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHH
Confidence            3578999999999999999776421 1100000 00000000 000000     011112221111  123455788999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhhhcccc
Q 039745           74 VRCLLKNPAERPSVEDVLWNLQFAAQVQDA  103 (127)
Q Consensus        74 ~~cl~~~p~~Rp~~~~~~~~~~~~~~~~~~  103 (127)
                      .+||..+|.+||++.++++.+..+......
T Consensus       293 ~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~  322 (336)
T 3g2f_A          293 EDCWDQDAEARLTAQXAEERMAELMMIWER  322 (336)
T ss_dssp             HHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred             HHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence            999999999999999999999987765543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.28  E-value=1.9e-12  Score=89.02  Aligned_cols=84  Identities=18%  Similarity=0.236  Sum_probs=55.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||++|||++|..||...... ....+......       .  ....+...    ...+.+|+.+||..+
T Consensus       365 ~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~-------~--~~~~p~~~----s~~~~~li~~lL~~d  431 (543)
T 3c4z_A          365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-------Q--AVTYPDKF----SPASKDFCEALLQKD  431 (543)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH-------C--CCCCCTTS----CHHHHHHHHHHSCSS
T ss_pred             CCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh-------c--ccCCCccc----CHHHHHHHHHhccCC
Confidence            4788999999999999999999999643210 01111110000       0  11111222    235669999999999


Q ss_pred             CCCCCC-----HHHHHHHHHHhh
Q 039745           81 PAERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~-----~~~~~~~~~~~~   98 (127)
                      |.+||+     +.+++.|+||..
T Consensus       432 P~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          432 PEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             GGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HhHCCCCcccCHHHHHcCccccC
Confidence            999996     488999998754

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.10  E-value=6.1e-12  Score=88.15  Aligned_cols=97  Identities=11%  Similarity=0.001  Sum_probs=54.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhh---chHHHhhh--cCC--cCcccccHHHHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITA---DESARRSM--VDP--AVNKACLDESLKTMMEVC   73 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~---~~~~~~~~--~~~--~~~~~~~~~~~~~~~~l~   73 (127)
                      .++.++||||+|++++++++|..||........ ...+......   ........  ...  .............+.+|+
T Consensus       199 ~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI  278 (676)
T 3qa8_A          199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWL  278 (676)
T ss_dssp             CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHH
Confidence            478899999999999999999999864321110 0000000000   00000000  000  011112233456788999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           74 VRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        74 ~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||..+|.+||++.+++.|.+|..
T Consensus       279 ~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          279 QCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHHccCCHhhCcCHHHHhcCHHHHH
Confidence            9999999999999999888777644

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.81  E-value=2.4e-09  Score=75.44  Aligned_cols=72  Identities=18%  Similarity=0.232  Sum_probs=48.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+|+++++|++|..|+.......+                    +  ...........+.+|+.+||..+|.
T Consensus       253 ~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------------~--~~~~~~~~~~~l~~li~~~l~~dP~  310 (681)
T 2pzi_A          253 PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------------P--EDDPVLKTYDSYGRLLRRAIDPDPR  310 (681)
T ss_dssp             SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------------C--TTCHHHHHCHHHHHHHHHHTCSSGG
T ss_pred             CCCceehhhhHHHHHHHHhCCCCCcccccccc--------------------c--ccccccccCHHHHHHHhhhccCChh
Confidence            46789999999999999999887653211100                    0  0000111224567999999999999


Q ss_pred             CCCCHHHHHHHHHH
Q 039745           83 ERPSVEDVLWNLQF   96 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~   96 (127)
                      +||+..+.+.+.++
T Consensus       311 ~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          311 QRFTTAEEMSAQLT  324 (681)
T ss_dssp             GSCSSHHHHHHHHH
T ss_pred             hCCCHHHHHHHHHH
Confidence            99986666655543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.80  E-value=1.8e-08  Score=65.95  Aligned_cols=77  Identities=14%  Similarity=0.100  Sum_probs=49.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+|++++||++|+.||........             .    ..........   .....+++..|+..+|
T Consensus       261 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------------~----~~~~~~~~~~---~~~~~~~~~~~l~~~p  320 (365)
T 3e7e_A          261 PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-------------K----PEGLFRRLPH---LDMWNEFFHVMLNIPD  320 (365)
T ss_dssp             CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-------------E----ECSCCTTCSS---HHHHHHHHHHHHCCCC
T ss_pred             CCCccccHHHHHHHHHHHHhCCCccccCCCCce-------------e----echhccccCc---HHHHHHHHHHHcCCCC
Confidence            478899999999999999999999853321100             0    0011111111   2244578889999999


Q ss_pred             CCC-CCHHHHHHHHHHhh
Q 039745           82 AER-PSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~R-p~~~~~~~~~~~~~   98 (127)
                      .+| +++.++...+....
T Consensus       321 ~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          321 CHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             TTCCCCHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHH
Confidence            999 55666665555443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.21  E-value=9.4e-07  Score=57.19  Aligned_cols=81  Identities=15%  Similarity=0.030  Sum_probs=49.1

Q ss_pred             CCCCchhHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhh-hcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            2 KLEDKIDIYDFGLI-LLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRS-MVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         2 ~~~~~~Diws~G~~-~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      ..+.++||||++++ .++++.|..||.....  .......       .... .................+.+|+.+||..
T Consensus       252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~  322 (336)
T 2vuw_A          252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTDK-------MLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNF  322 (336)
T ss_dssp             CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHHHH-------HHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGS
T ss_pred             CCccceehhhhhCCCCcccccccCCCcchhh--hhHHHHh-------hhhhhccCcccchhhhhhcCHHHHHHHHHHhcc
Confidence            34678999998777 6677888888732110  0001100       0101 1111122223345667889999999997


Q ss_pred             CCCCCCCHHHHH-HHHHH
Q 039745           80 NPAERPSVEDVL-WNLQF   96 (127)
Q Consensus        80 ~p~~Rp~~~~~~-~~~~~   96 (127)
                      +     ++.+++ +|+|+
T Consensus       323 d-----sa~e~l~~Hp~f  335 (336)
T 2vuw_A          323 S-----SATDLLCQHSLF  335 (336)
T ss_dssp             S-----SHHHHHHHCGGG
T ss_pred             C-----CHHHHHhcCCCc
Confidence            7     999999 89875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	127
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-07
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-07
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-07
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-06
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-06
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-05
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-05
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-05
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.001
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.001
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.002
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	0.004
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	0.004

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 8e-10
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 12/100 (12%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
                + D+Y FG++L E++ G+ P  +    D +   +           R  + P ++K
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG----------RGYLSPDLSK 233

Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
              +   K M  +   CL K   ERP    +L +++  A+
Sbjct: 234 VRSNCP-KAMKRLMAECLKKKRDERPLFPQILASIELLAR 272

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 14/87 (16%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
             D++  G ++  ++ G  P  +     +++N + A  T DE A +           +  
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE----------ISI 232

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
                ++   R L+K    R +  + L
Sbjct: 233 EAMDFVD---RLLVKERKSRMTASEAL 256

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 4e-08
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 6/101 (5%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPLKSRKE------VDLLKNQLQAVITADESARRSMVD 54
            +   + DIY  GL+  EI     +    E       DL+ +             + +  
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252

Query: 55  PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
              N+    E+L+ M ++   C   N A R +   +   L 
Sbjct: 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 7e-08
 Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 15/92 (16%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
            K ++ +D+Y FG+ +LE+     P    +    +  ++            S V PA   
Sbjct: 187 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT-----------SGVKPASFD 235

Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
                 +K ++E    C+ +N  ER S++D+L
Sbjct: 236 KVAIPEVKEIIE---GCIRQNKDERYSIKDLL 264

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 2e-07
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 17/105 (16%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESA----------- 48
                 +D++  G I  E+   +PL +   +VD L   L  +    E             
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249

Query: 49  --RRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
              +S          +DE  K ++    +CL  NPA+R S    L
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAYSAL 291

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 3e-07
 Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 24/116 (20%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           K+DI+  G++ +E+I G  P  +   +  L                +      N   L  
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-----------TNGTPELQNPEKLSA 244

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISPPWPS 120
             +  +    RCL  +  +R S +++L         Q  +   +   S ++P   +
Sbjct: 245 IFRDFLN---RCLDMDVEKRGSAKELL---------QHQFLKIAKPLSSLTPLIAA 288

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (107), Expect = 3e-07
 Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 18/87 (20%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           K+D++  G++  E +VG+ P ++    +  K   +   T  +               + E
Sbjct: 184 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--------------VTE 229

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
             + ++    R L  NP++RP + +VL
Sbjct: 230 GARDLIS---RLLKHNPSQRPMLREVL 253

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 3e-07
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 18/97 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
            K   K D++ FG++L E++     P       D+    LQ          R ++ P   
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------RRLLQP--- 256

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
               +     + EV ++C       RPS  +++  + 
Sbjct: 257 ----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.4 bits (107), Expect = 3e-07
 Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 16/92 (17%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
           G+ + K+D++  G+  +E+   + PL +   +  L +  Q               PA+  
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ------------NESPALQS 236

Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
               E  +  ++    CL K P +RP+ E +L
Sbjct: 237 GHWSEYFRNFVD---SCLQKIPQDRPTSEVLL 265

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 44.7 bits (105), Expect = 5e-07
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 14/87 (16%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
             D++  G++   ++ G  P     + + L+N        D+SA             + E
Sbjct: 205 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG----------ISE 254

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
             K  +    + LL +P  R ++   L
Sbjct: 255 DGKDFIR---KLLLADPNTRMTIHQAL 278

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 44.3 bits (104), Expect = 7e-07
 Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 14/87 (16%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           ++D++  G+I+  ++ G  P   RK++ +L+  +                         +
Sbjct: 195 EVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD----------YSD 244

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
           ++K ++    R L+  P +R + E+ L
Sbjct: 245 TVKDLVS---RFLVVQPQKRYTAEEAL 268

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.3 bits (104), Expect = 7e-07
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 14/87 (16%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
            +D +  G+I   ++ G  P     +  L +  L+A    D                + +
Sbjct: 189 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD----------ISD 238

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
           S K  +      + K+P +R + E  L
Sbjct: 239 SAKDFIR---HLMEKDPEKRFTCEQAL 262

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 7e-07
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 13/99 (13%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVD--------PA 56
            +DI+  G I  E++  R       E+D L    + + T DE     +          P 
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242

Query: 57  VNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 91
             +    + +  + E       + L  +P +R S +  L
Sbjct: 243 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 8e-07
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 13/86 (15%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
            +D++  G++L  ++ G         D   +  Q      E          ++ A L   
Sbjct: 186 PVDVWSCGIVLTAMLAGEL-----PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA-- 238

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
                 +  + L++NP+ R ++ D+ 
Sbjct: 239 ------LLHKILVENPSARITIPDIK 258

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 9e-07
 Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 12/98 (12%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADE-------SARRSMVDPAV 57
            +D++  G IL E+++  P      ++D L    + + T  E       S    +   + 
Sbjct: 181 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 240

Query: 58  NKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 91
               L        +  +       L NP  R +    L
Sbjct: 241 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 278

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 1e-06
 Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
            K     D++ FG+++ E++        +                       ++      
Sbjct: 188 RKFTSASDVWSFGIVMWEVMTYGERPYWEL--------------SNHEVMKAINDGFRLP 233

Query: 61  CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSS 109
              +    + ++ ++C  +  A RP   D++  L    +  D+  + + 
Sbjct: 234 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLAD 282

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (101), Expect = 2e-06
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 15/87 (17%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
           K D++  G+ L+E+     P      + +L    ++         R              
Sbjct: 195 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----------WSS 243

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
           + K  ++   +CL KN   R +   +L
Sbjct: 244 NFKDFLK---KCLEKNVDARWTTSQLL 267

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 12/97 (12%), Positives = 32/97 (32%), Gaps = 18/97 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
            K     D++ +G+++ E++    RP       D++                  ++    
Sbjct: 208 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN----------------AIEQDYR 251

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
                +    + ++ + C  K+   RP    ++  L 
Sbjct: 252 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-06
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 17/92 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
               +K DI+  G +L E+     P  +  + +L     +         +   +    + 
Sbjct: 189 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--------KFRRIPYRYSD 240

Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
              +        +  R L      RPSVE++L
Sbjct: 241 ELNE--------IITRMLNLKDYHRPSVEEIL 264

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 3e-06
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVD-------PAV 57
            ID++  G +L E+++G+P+      VD L   ++ + T      R M         P +
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 262

Query: 58  NKACLDESLKTMM-----EVCVRCLLKNPAERPSVEDVL 91
                 +  +         +C R L   P  R +  +  
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 4e-06
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 14/95 (14%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
           G+   K D++ FG++L E+     +     V+      + V+   E   R    P   ++
Sbjct: 189 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVERGYRMPCPPECPES 242

Query: 61  CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
             D        +  +C  K P ERP+ E +   L+
Sbjct: 243 LHD--------LMCQCWRKEPEERPTFEYLQAFLE 269

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 42.0 bits (98), Expect = 4e-06
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 14/85 (16%)

Query: 8   DIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESL 66
           D++  G++   ++ G  P     +++ L+N  +     DE A  S          +    
Sbjct: 210 DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS----------VSPEA 259

Query: 67  KTMMEVCVRCLLKNPAERPSVEDVL 91
           K  ++     L K P +R +V D L
Sbjct: 260 KDFIK---NLLQKEPRKRLTVHDAL 281

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 5e-06
 Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 18/97 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
            +   K D++ FG+++ E+      P ++R   +++++               +  P + 
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---------RLYKPRL- 226

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
                  +  +M     C  + P +RP+   +L  L 
Sbjct: 227 ---ASTHVYQIMN---HCWKERPEDRPAFSRLLRQLA 257

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 6e-06
 Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 16/96 (16%)

Query: 1   GKLEDKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
            K   K D++ FG++L EI   GR    R  +  +  ++                     
Sbjct: 175 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----------EKGYKMDAPD 223

Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            C       + EV   C   + A RPS   +   L+
Sbjct: 224 GCPPA----VYEVMKNCWHLDAAMRPSFLQLREQLE 255

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 41.8 bits (97), Expect = 6e-06
 Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 13/99 (13%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVD--------PA 56
            IDI+  G I  E++ G PL     E D L    + + T +     ++ +          
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240

Query: 57  VNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 91
                 +  LK + E  +    + L  +P +R + +  L
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 41.7 bits (97), Expect = 6e-06
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 15/97 (15%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
             ++ + D+Y  G +L E++ G  P      V +    +          R   + P+   
Sbjct: 189 DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV----------REDPIPPSARH 238

Query: 60  ACLDESLKTMMEVCVRCLLKNPAERP-SVEDVLWNLQ 95
             L   L  ++    + L KNP  R  +  ++  +L 
Sbjct: 239 EGLSADLDAVVL---KALAKNPENRYQTAAEMRADLV 272

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 7e-06
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 18/97 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
           G    K D++ FG++L EI+     P       ++++N  +            MV P   
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---------YRMVRPD-- 233

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
                E L  +M     C  + P +RP+ + +   L+
Sbjct: 234 --NCPEELYQLMR---LCWKERPEDRPTFDYLRSVLE 265

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 9e-06
 Identities = 22/100 (22%), Positives = 30/100 (30%), Gaps = 14/100 (14%)

Query: 6   KIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
            ID++  G I  E+              D LK   + + T  E    SM      K    
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241

Query: 64  ESLKTMMEVCV------------RCLLKNPAERPSVEDVL 91
               T +   V              L  NP +R S E+ L
Sbjct: 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 1e-05
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 18/97 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
            K   K DI+ FG+++ EI      P +     +  ++  Q +          +  P   
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR---------LYRP--- 223

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
                 + + +  +   C  +   ERP+ + +L N+ 
Sbjct: 224 ----HLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-05
 Identities = 10/86 (11%), Positives = 29/86 (33%), Gaps = 8/86 (9%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
             D++  G+I+  ++ G P         +   ++  I   +    +     V++      
Sbjct: 193 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM-- 250

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
                 +    L   P +R ++ + +
Sbjct: 251 ------LIRNLLKTEPTQRMTITEFM 270

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-05
 Identities = 14/130 (10%), Positives = 41/130 (31%), Gaps = 19/130 (14%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
                + D++ +G+ + E++    +P       ++                  +++    
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS----------------ILEKGER 231

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNL-QFAAQVQDAWHSQSSEGSPISPP 117
                     +  + V+C + +   RP   +++    + A   Q     Q  E   +  P
Sbjct: 232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSP 291

Query: 118 WPSHQHLSFH 127
             S+ + +  
Sbjct: 292 TDSNFYRALM 301

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
            +     D++ FG+ + EI++   +P +  K  D++               R  + P   
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--------ERLPMPPNCP 235

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
                        +  +C   +P+ RP   ++   L    + + A
Sbjct: 236 PTLYS--------LMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 18/92 (19%)

Query: 6   KIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
             D++ +G++L EI+     P       +L +   Q                     C D
Sbjct: 206 NSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY------------RLEKPLNCDD 253

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
           E    + ++  +C  + P ERPS   +L +L 
Sbjct: 254 E----VYDLMRQCWREKPYERPSFAQILVSLN 281

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 23/114 (20%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
            K   + D++ +G+ + E +    +P K  K  +++    Q                   
Sbjct: 187 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK------------RMECP 234

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ-----FAAQVQDAWHSQ 107
             C  E    +  +   C +    +RP    V   ++      A++V+   H  
Sbjct: 235 PECPPE----LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHHH 284

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 2e-05
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 18/92 (19%)

Query: 6   KIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           + D++ +G++L EI      P       +++       I             A  + C  
Sbjct: 222 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI------------LACPENCPL 269

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
           E    +  +   C  K PA+RPS   +   LQ
Sbjct: 270 E----LYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 24/113 (21%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
            K   K D++ FG+++ E      +P +  K  ++                  M++    
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----------------MLEKGER 228

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEG 111
             C     + M ++   C   +   RP    V   L      ++ ++   +EG
Sbjct: 229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL------RNYYYDVVNEG 275

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 20/122 (16%), Positives = 37/122 (30%), Gaps = 34/122 (27%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVD------ 54
                + DI+  GL L+E+ VGR      +   L+      +  D +             
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237

Query: 55  -------------------------PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVED 89
                                    P +         +  +    +CL+KNPAER  ++ 
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN---KCLIKNPAERADLKQ 294

Query: 90  VL 91
           ++
Sbjct: 295 LM 296

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 14/86 (16%)

Query: 7   IDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
            D++  G+I   ++ G  P     + + L N        ++    +              
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN----------TSAL 246

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
            K  +    R L+K+P +R +++D L
Sbjct: 247 AKDFIR---RLLVKDPKKRMTIQDSL 269

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 3e-05
 Identities = 11/87 (12%), Positives = 32/87 (36%), Gaps = 18/87 (20%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
             D++  G I+ +++ G  P ++  E  + +  ++      E                  
Sbjct: 190 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--------------FFP 235

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVL 91
             + ++E   + L+ +  +R   E++ 
Sbjct: 236 KARDLVE---KLLVLDATKRLGCEEME 259

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 4e-05
 Identities = 14/97 (14%), Positives = 36/97 (37%), Gaps = 18/97 (18%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
            +D + FG++L E+++G+ P   + E +L  +                         L++
Sbjct: 183 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW--------------LEK 228

Query: 65  SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ 101
             K ++    +  ++ P +R  V   +       ++ 
Sbjct: 229 EAKDLLV---KLFVREPEKRLGVRGDIRQHPLFREIN 262

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (90), Expect = 5e-05
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 14/95 (14%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
            K   K D++ FG++L EI                         D S    +++      
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------------DLSQVYELLEKDYRME 236

Query: 61  CLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
             +   + + E+   C   NP++RPS  ++    +
Sbjct: 237 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 5e-05
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 16/96 (16%)

Query: 1   GKLEDKIDIYDFGLILLEII-VGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
                + D++ FG++L EI  +G        V+ L   L           +         
Sbjct: 212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-----------KEGHRMDKPS 260

Query: 60  ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
            C +E    +  +   C    P++RP+ + ++ +L 
Sbjct: 261 NCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 9e-05
 Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 15/101 (14%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVD---------- 54
            IDI+  G IL E++  RP+   +  +D L + L  + +  +     +++          
Sbjct: 193 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 252

Query: 55  PAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 91
           P  NK   +          +    + L  NP +R  VE  L
Sbjct: 253 PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 1e-04
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 16/102 (15%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVD---------P 55
            ID++  G I+ E+    P+ +   E   L    Q   +       ++ +          
Sbjct: 202 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 261

Query: 56  AVNKACLDESLKTMM------EVCVRCLLKNPAERPSVEDVL 91
              K  + + LK  +      ++  + L+ +PA+R   +D L
Sbjct: 262 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 303

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 2e-04
 Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 15/101 (14%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVD---------- 54
            +DI+  G I+ E++ GR L      +D LK  L+ V T      + +            
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258

Query: 55  PAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 91
             + K            + V    + L+ +  +R +    L
Sbjct: 259 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.1 bits (85), Expect = 2e-04
 Identities = 10/90 (11%), Positives = 24/90 (26%), Gaps = 8/90 (8%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
           + D+   G +L+   +G       +        +         + S     + K    E 
Sbjct: 193 RDDLESLGYVLMYFNLGSLPWQGLKAA----TKRQKYERISEKKMSTPIEVLCKGYPSE- 247

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
             T +     C      ++P    +    +
Sbjct: 248 FATYLN---FCRSLRFDDKPDYSYLRQLFR 274

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 3e-04
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 18/97 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
           G      D++ FG++L EI      P +      +L+  ++  +                
Sbjct: 210 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL------------LDKP 257

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
             C D     + E+   C   NP  RPS  +++ +++
Sbjct: 258 DNCPDM----LFELMRMCWQYNPKMRPSFLEIISSIK 290

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 14/93 (15%), Positives = 26/93 (27%), Gaps = 17/93 (18%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
                  D + FG+ L E+      P        +L               +        
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID-----------KEGERLPRP 237

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
           + C  +    +  V V+C    P +RP+   + 
Sbjct: 238 EDCPQD----IYNVMVQCWAHKPEDRPTFVALR 266

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 4e-04
 Identities = 11/86 (12%), Positives = 33/86 (38%), Gaps = 22/86 (25%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
              ++  G++L +++ G       E ++++ Q+                    +  +   
Sbjct: 190 SAAVWSLGILLYDMVCGDIPFEHDE-EIIRGQVFF------------------RQRVSSE 230

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVL 91
            + ++     CL   P++RP+ E++ 
Sbjct: 231 CQHLIR---WCLALRPSDRPTFEEIQ 253

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 6e-04
 Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 6   KIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAV----------ITADESARRSMVD 54
            +DI+  G I+ E+I G+ L K    +D LK  ++            + +DE+       
Sbjct: 199 TVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 258

Query: 55  PAVNKACLDESLKTMMEVCV----RCLLKNPAERPSVEDVL 91
           P + K      L     + V    + L+ +  +R +  + L
Sbjct: 259 PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 299

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.001
 Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 17/97 (17%)

Query: 1   GKLEDKIDIYDFGLILLEIIVG--RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN 58
           G    K D++ +G++L EI      P             +Q     D+    +       
Sbjct: 241 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYAT------- 293

Query: 59  KACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
                   + +  +   C   +  +RPS  ++   L 
Sbjct: 294 --------EEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.001
 Identities = 11/90 (12%), Positives = 31/90 (34%), Gaps = 13/90 (14%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
           + D++ +G+ L E+                          +S    M+         + +
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGM-------------PVDSKFYKMIKEGFRMLSPEHA 273

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
              M ++   C   +P +RP+ + ++  ++
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.002
 Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 14/82 (17%)

Query: 6   KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
            +D +  G+++ E++ G  P     E +      + ++ ++    + M            
Sbjct: 212 AVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM----------SA 261

Query: 65  SLKTMMEVCVRCLLKNPAERPS 86
             K +++   R L+K+P +R  
Sbjct: 262 LAKDLIQ---RLLMKDPKKRLG 280

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (75), Expect = 0.004
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 17/92 (18%)

Query: 6   KIDIYDFGLILLEIIVGR--PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
           + D++ FG++L EI      P    K  +    +L           +             
Sbjct: 216 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-----------KEGTRMRAPDYTTP 264

Query: 64  ESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
           E    M +  + C    P++RP+  +++ +L 
Sbjct: 265 E----MYQTMLDCWHGEPSQRPTFSELVEHLG 292

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 33.6 bits (76), Expect = 0.004
 Identities = 8/90 (8%), Positives = 21/90 (23%), Gaps = 8/90 (8%)

Query: 6   KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDES 65
           + D+   G + +  + G       +    K + + +    +S     +          E 
Sbjct: 193 RDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGF-----PEE 247

Query: 66  LKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
               M              P  + +     
Sbjct: 248 FYKYMH---YARNLAFDATPDYDYLQGLFS 274

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	127
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.73
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.71
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.7
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.69
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.68
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.68
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.68
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.68
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.68
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.67
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.67
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.67
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.67
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.67
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.67
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.66
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.66
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.65
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.65
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.65
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.65
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.65
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.65
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.65
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.65
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.64
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.64
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.64
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.63
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.63
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.62
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.62
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.62
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.62
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.61
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.6
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.6
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.6
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.6
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.6
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.6
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.59
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.59
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.59
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.58
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.57
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.57
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.57
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.57
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.57
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.56
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.55
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.54
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.53
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.52
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.52
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.52
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.51
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.51
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.5
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.37

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.6e-18  Score=106.92  Aligned_cols=82  Identities=21%  Similarity=0.368  Sum_probs=59.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+   ..         .....+...    ...+.+|+.+||..||
T Consensus       180 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i---~~---------~~~~~p~~~----s~~~~~li~~~L~~dp  243 (263)
T d2j4za1         180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI---SR---------VEFTFPDFV----TEGARDLISRLLKHNP  243 (263)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HT---------TCCCCCTTS----CHHHHHHHHHHTCSSG
T ss_pred             CCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHH---Hc---------CCCCCCccC----CHHHHHHHHHHccCCH
Confidence            4789999999999999999999999755543332221   00         111122222    2356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|+|+...
T Consensus       244 ~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         244 SQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             GGSCCHHHHHTCHHHHHH
T ss_pred             hHCcCHHHHHcCcCcCCc
Confidence            999999999999997643

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=8.9e-18  Score=105.14  Aligned_cols=87  Identities=24%  Similarity=0.420  Sum_probs=60.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||||||++|||++|+.||.... .......+.          .....+.. .......+..+.+|+.+||..+
T Consensus       185 ~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~----------~~~~~p~~-~~~~~~~~~~l~~li~~cl~~d  253 (276)
T d1uwha_         185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG----------RGYLSPDL-SKVRSNCPKAMKRLMAECLKKK  253 (276)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH----------HTSCCCCG-GGSCTTCCHHHHHHHHHHTCSS
T ss_pred             CCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHh----------cCCCCCcc-hhccccchHHHHHHHHHHcCCC
Confidence            47889999999999999999999996433 222222221          11111111 1112223346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.+++.+++.+..
T Consensus       254 p~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         254 RDERPLFPQILASIELLAR  272 (276)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHHH
Confidence            9999999999999987654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.2e-18  Score=106.90  Aligned_cols=82  Identities=22%  Similarity=0.421  Sum_probs=57.1

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      ++|+.++||||+||++|||++|+.||... ....+...+   ..       ....+.....    ....+.+|+.+||..
T Consensus       187 ~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i---~~-------~~~~~~~~~~----~~~~~~~li~~~l~~  252 (270)
T d1t4ha_         187 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TS-------GVKPASFDKV----AIPEVKEIIEGCIRQ  252 (270)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TT-------TCCCGGGGGC----CCHHHHHHHHHHSCS
T ss_pred             CCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHH---Hc-------CCCCcccCcc----CCHHHHHHHHHHccC
Confidence            46899999999999999999999999533 322222221   00       0011111111    223467999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQF   96 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~   96 (127)
                      +|.+||++.++++|+|+
T Consensus       253 dp~~R~s~~ell~Hp~f  269 (270)
T d1t4ha_         253 NKDERYSIKDLLNHAFF  269 (270)
T ss_dssp             SGGGSCCHHHHHTSGGG
T ss_pred             CHhHCcCHHHHhCCccc
Confidence            99999999999999885

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=2.5e-17  Score=104.15  Aligned_cols=86  Identities=13%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++|||||||++|||++ |+.||...........+   ..        -..+...    ......+.+|+.+||..
T Consensus       208 ~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i---~~--------~~~~~~~----~~~~~~l~~li~~cl~~  272 (299)
T d1jpaa_         208 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQ--------DYRLPPP----MDCPSALHQLMLDCWQK  272 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HT--------TCCCCCC----TTCCHHHHHHHHHHTCS
T ss_pred             CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc--------CCCCCCC----ccchHHHHHHHHHHcCC
Confidence            358889999999999999998 89998654433322222   11        0111111    22334677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.++++.+..+...+
T Consensus       273 ~P~~RPs~~ei~~~L~~~l~~p  294 (299)
T d1jpaa_         273 DRNHRPKFGQIVNTLDKMIRNP  294 (299)
T ss_dssp             STTTSCCHHHHHHHHHHHHHSG
T ss_pred             CHhHCcCHHHHHHHHHHHhcCh
Confidence            9999999999999998776544

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=1.4e-17  Score=105.63  Aligned_cols=85  Identities=19%  Similarity=0.239  Sum_probs=59.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|..||...........+.   ..     ........    .......+.+|+.+||..+|
T Consensus       185 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~---~~-----~~~~~~~~----~~~~s~~~~~li~~~L~~dP  252 (307)
T d1a06a_         185 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL---KA-----EYEFDSPY----WDDISDSAKDFIRHLMEKDP  252 (307)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---TT-----CCCCCTTT----TTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHh---cc-----CCCCCCcc----ccCCCHHHHHHHHHHccCCH
Confidence            48899999999999999999999997554433322220   00     00011111    11223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|+|+..
T Consensus       253 ~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         253 EKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             GGSCCHHHHHHSTTTTS
T ss_pred             hHCcCHHHHhcCHhhCC
Confidence            99999999999998753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.7e-17  Score=104.99  Aligned_cols=96  Identities=22%  Similarity=0.283  Sum_probs=61.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhc----------CCcCcccccHHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMV----------DPAVNKACLDESLKTMM   70 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~   70 (127)
                      .|+.++||||+||+++||++|+.||.... ...+..+............+...          ...............+.
T Consensus       191 ~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  270 (305)
T d1blxa_         191 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGK  270 (305)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHH
T ss_pred             CCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHH
Confidence            58899999999999999999999996443 34444444332222111111000          00000111112234567


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           71 EVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        71 ~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      +|+.+||..||.+|||+.++++|+|+.
T Consensus       271 dli~~mL~~dP~~R~sa~e~L~Hpff~  297 (305)
T d1blxa_         271 DLLLKCLTFNPAKRISAYSALSHPYFQ  297 (305)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHCcCChhHCcCHHHHhcChhhc
Confidence            899999999999999999999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.4e-18  Score=104.90  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=57.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||.......+...+.           ....+..+..++    ..+.+|+.+||..||
T Consensus       190 ~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~-----------~~~~~~~~~~~s----~~l~~li~~~L~~dp  254 (269)
T d2java1         190 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR-----------EGKFRRIPYRYS----DELNEIITRMLNLKD  254 (269)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-----------HTCCCCCCTTSC----HHHHHHHHHHTCSSG
T ss_pred             CCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHH-----------cCCCCCCCcccC----HHHHHHHHHHcCCCh
Confidence            58899999999999999999999997655433322221           111112222222    356799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.++++|+|
T Consensus       255 ~~Rps~~ell~hp~  268 (269)
T d2java1         255 YHRPSVEEILENPL  268 (269)
T ss_dssp             GGSCCHHHHHTSTT
T ss_pred             hHCcCHHHHHhCCc
Confidence            99999999999876

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=1.9e-17  Score=105.10  Aligned_cols=83  Identities=19%  Similarity=0.303  Sum_probs=58.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||++|||++|..||...... .+..+.            ....+.....   .....+.+|+.+||..|
T Consensus       190 ~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~------------~~~~~~~~~~---~~s~~~~~li~~~L~~d  254 (309)
T d1u5ra_         190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA------------QNESPALQSG---HWSEYFRNFVDSCLQKI  254 (309)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH------------HSCCCCCSCT---TSCHHHHHHHHHHTCSS
T ss_pred             CcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH------------hCCCCCCCCC---CCCHHHHHHHHHHCcCC
Confidence            5889999999999999999999998644332 222111            0011111111   12235679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++|+|+...
T Consensus       255 P~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         255 PQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             GGGSCCHHHHTTCHHHHSC
T ss_pred             hhHCcCHHHHHhCHHhcCC
Confidence            9999999999999998653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=7.2e-17  Score=101.72  Aligned_cols=83  Identities=18%  Similarity=0.244  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||++|||++|..||...... .+..+..          .........    ......+.+|+.+||..+
T Consensus       192 ~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~----------~~~~~~~~~----~~~s~~~~~li~~~L~~d  257 (293)
T d1yhwa1         192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT----------NGTPELQNP----EKLSAIFRDFLNRCLDMD  257 (293)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----------HCSCCCSSG----GGSCHHHHHHHHHHTCSS
T ss_pred             CCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh----------CCCCCCCCc----ccCCHHHHHHHHHHccCC
Confidence            4789999999999999999999999654432 2222210          000111111    122345679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++|.|+..
T Consensus       258 P~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         258 VEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             TTTSCCHHHHTTCGGGGG
T ss_pred             hhHCcCHHHHhcCHhhCC
Confidence            999999999999998754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.9e-17  Score=102.06  Aligned_cols=84  Identities=23%  Similarity=0.301  Sum_probs=59.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||++ |+.|+...........+           ..-..+.....    ....+.+|+.+||..
T Consensus       175 ~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-----------~~~~~~~~~~~----~~~~~~~li~~cl~~  239 (262)
T d1byga_         175 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----------EKGYKMDAPDG----CPPAVYEVMKNCWHL  239 (262)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-----------TTTCCCCCCTT----CCHHHHHHHHHHTCS
T ss_pred             CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-----------HcCCCCCCCcc----CCHHHHHHHHHHccc
Confidence            468899999999999999998 67777654444332222           11111222222    224667999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      ||.+||++.++++++..+..
T Consensus       240 dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         240 DAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHh
Confidence            99999999999999987654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.3e-17  Score=105.09  Aligned_cols=85  Identities=14%  Similarity=0.203  Sum_probs=58.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+.   ..         ...............+.+|+.+||..||
T Consensus       192 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~---~~---------~~~~~~~~~~~~s~~~~~li~~~L~~dP  259 (293)
T d1jksa_         192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS---AV---------NYEFEDEYFSNTSALAKDFIRRLLVKDP  259 (293)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---TT---------CCCCCHHHHTTSCHHHHHHHHTTSCSSG
T ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHH---hc---------CCCCCchhcCCCCHHHHHHHHHHccCCh
Confidence            47899999999999999999999996544332221110   00         0111111111223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|.|+..
T Consensus       260 ~~R~s~~eil~hp~~~~  276 (293)
T d1jksa_         260 KKRMTIQDSLQHPWIKP  276 (293)
T ss_dssp             GGSCCHHHHHHSTTTCC
T ss_pred             hHCcCHHHHhcCcccCC
Confidence            99999999999998743

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-17  Score=102.21  Aligned_cols=84  Identities=15%  Similarity=0.336  Sum_probs=57.5

Q ss_pred             CCCCCchhHHHHHHHHHHHHhC-CCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVG-RPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||+++ .+|+...........+.   ..        ..+..+..+    ...+.+|+..||..
T Consensus       177 ~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~---~~--------~~~~~p~~~----~~~l~~li~~cl~~  241 (263)
T d1sm2a_         177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS---TG--------FRLYKPRLA----STHVYQIMNHCWKE  241 (263)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH---HT--------CCCCCCTTS----CHHHHHHHHHHTCS
T ss_pred             CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH---hc--------CCCCCcccc----CHHHHHHHHHHccC
Confidence            3588999999999999999995 55555444333222221   11        111111222    24567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||+++++++++..+.+
T Consensus       242 ~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         242 RPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHh
Confidence            99999999999999887643

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=6e-17  Score=101.88  Aligned_cols=83  Identities=17%  Similarity=0.196  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||++|||++|+.||....... +..+.    .        ...+...  .+......+.+|+.+||+.|
T Consensus       191 ~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~----~--------~~~~~~~--~~~~~s~~~~~li~~~L~~d  256 (288)
T d2jfla1         191 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA----K--------SEPPTLA--QPSRWSSNFKDFLKKCLEKN  256 (288)
T ss_dssp             STTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH----H--------SCCCCCS--SGGGSCHHHHHHHHHHSCSS
T ss_pred             CCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH----c--------CCCCCCC--ccccCCHHHHHHHHHHccCC
Confidence            37889999999999999999999996543322 22221    0        0001111  11122346679999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++|+|+..
T Consensus       257 p~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         257 VDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             TTTSCCHHHHTTSGGGCC
T ss_pred             hhHCcCHHHHhcCcccCC
Confidence            999999999999998743

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.9e-17  Score=101.99  Aligned_cols=85  Identities=14%  Similarity=0.266  Sum_probs=60.2

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++|||||||++|||++ |.+||...........+.   .        -..+..+..    .+..+.+|+.+||..
T Consensus       184 ~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~---~--------~~~~~~~~~----~~~~~~~li~~cl~~  248 (273)
T d1mp8a_         184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE---N--------GERLPMPPN----CPPTLYSLMTKCWAY  248 (273)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH---T--------TCCCCCCTT----CCHHHHHHHHHHTCS
T ss_pred             CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH---c--------CCCCCCCCC----CCHHHHHHHHHHcCC
Confidence            368889999999999999998 888886544433322221   1        111112222    234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhc
Q 039745           80 NPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      +|.+||++.+++.++..+.+.
T Consensus       249 dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         249 DPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHHH
Confidence            999999999999999876543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.8e-17  Score=100.50  Aligned_cols=80  Identities=20%  Similarity=0.306  Sum_probs=57.5

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||++ |+.||...........+.   .        ...+..+.    .....+.+|+.+||..
T Consensus       176 ~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~---~--------~~~~~~p~----~~~~~l~~li~~cl~~  240 (258)
T d1k2pa_         176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA---Q--------GLRLYRPH----LASEKVYTIMYSCWHE  240 (258)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH---T--------TCCCCCCT----TCCHHHHHHHHHTTCS
T ss_pred             CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH---h--------CCCCCCcc----cccHHHHHHHHHHccC
Confidence            358899999999999999998 788997655443332221   1        11111222    2234677999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQ   95 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~   95 (127)
                      +|.+||++.+++.|+.
T Consensus       241 dP~~RPt~~eil~~L~  256 (258)
T d1k2pa_         241 KADERPTFKILLSNIL  256 (258)
T ss_dssp             SGGGSCCHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHhh
Confidence            9999999999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.4e-17  Score=103.31  Aligned_cols=86  Identities=12%  Similarity=0.237  Sum_probs=61.6

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++|||||||++|||++ |..||.......+...+..           -..+..+..    ....+.+|+.+||..
T Consensus       188 ~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~-----------~~~~~~p~~----~~~~~~~li~~cl~~  252 (317)
T d1xkka_         188 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-----------GERLPQPPI----CTIDVYMIMVKCWMI  252 (317)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHH-----------TCCCCCCTT----BCHHHHHHHHHHTCS
T ss_pred             CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----------CCCCCCCcc----cCHHHHHHHHHhCCC
Confidence            468899999999999999998 7888876554444333311           011111112    234567999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.+++.++..+...+
T Consensus       253 dP~~RPs~~eil~~l~~~~~~~  274 (317)
T d1xkka_         253 DADSRPKFRELIIEFSKMARDP  274 (317)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHSH
T ss_pred             ChhhCcCHHHHHHHHHHHHhCh
Confidence            9999999999999988765433

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.5e-17  Score=103.39  Aligned_cols=96  Identities=18%  Similarity=0.277  Sum_probs=61.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcC-------CcCcc----cccHHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVD-------PAVNK----ACLDESLKTM   69 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~   69 (127)
                      .|+.++||||+||+++||++|..||... ..+.+..+....+............       .....    .........+
T Consensus       177 ~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  256 (299)
T d1ua2a_         177 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDL  256 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHH
T ss_pred             CCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHH
Confidence            3788999999999999999999998543 4444444443322221111110000       00000    0001123467


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      .+|+.+||..||.+|||+.++++|.|+.
T Consensus       257 ~dll~~~L~~dP~~R~sa~e~L~Hp~f~  284 (299)
T d1ua2a_         257 LDLIQGLFLFNPCARITATQALKMKYFS  284 (299)
T ss_dssp             HHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHccCChhhCcCHHHHhCCHhhC
Confidence            8999999999999999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8.5e-17  Score=102.60  Aligned_cols=95  Identities=22%  Similarity=0.306  Sum_probs=58.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHH--HHHhhch--------------------------HHHhhh-
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQ--AVITADE--------------------------SARRSM-   52 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~--~~~~~~~--------------------------~~~~~~-   52 (127)
                      .|+.++||||+||+++||++|+.||.............  .......                          ...... 
T Consensus       179 ~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (322)
T d1s9ja_         179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV  258 (322)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhh
Confidence            68999999999999999999999985433221111100  0000000                          000000 


Q ss_pred             --cCCcCcccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           53 --VDPAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        53 --~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                        ..+.....   .....+.+|+.+||..||.+|||+.++++|+|+...
T Consensus       259 ~~~~~~~~~~---~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         259 NEPPPKLPSG---VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             TSCCCCCCBT---TBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             ccCCccCccc---cCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence              00111110   112356799999999999999999999999998653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.6e-17  Score=103.58  Aligned_cols=80  Identities=19%  Similarity=0.228  Sum_probs=56.9

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      +.|+.++|||||||++|||++ |..||..... ..+..++.           .-..+..+.    .....+.+|+.+||.
T Consensus       241 ~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~-----------~~~~~~~p~----~~~~~l~~li~~cl~  305 (325)
T d1rjba_         241 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ-----------NGFKMDQPF----YATEEIYIIMQSCWA  305 (325)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-----------TTCCCCCCT----TCCHHHHHHHHHHTC
T ss_pred             CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----------cCCCCCCCC----cCCHHHHHHHHHHcC
Confidence            468899999999999999997 8999864332 22222221           111111222    223467799999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 039745           79 KNPAERPSVEDVLWNLQ   95 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~   95 (127)
                      .+|.+|||+++++++|.
T Consensus       306 ~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         306 FDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SSGGGSCCHHHHHHHHH
T ss_pred             CChhHCcCHHHHHHHHh
Confidence            99999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.65  E-value=3.9e-17  Score=102.25  Aligned_cols=83  Identities=18%  Similarity=0.320  Sum_probs=58.3

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      |+.++||||+||+++||++|+.||...........+.   .       .-  ..............+.+|+.+||..+|.
T Consensus       192 ~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~---~-------~~--~~~~~~~~~~~s~~~~~li~~~L~~~p~  259 (277)
T d1phka_         192 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM---S-------GN--YQFGSPEWDDYSDTVKDLVSRFLVVQPQ  259 (277)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H-------TC--CCCCTTTGGGSCHHHHHHHHHHCCSSGG
T ss_pred             CCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHH---h-------CC--CCCCCcccccCCHHHHHHHHHHccCChh
Confidence            6789999999999999999999997655433222220   0       00  0011111122334677999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +||++.++++|.|+.
T Consensus       260 ~R~s~~eil~h~~~~  274 (277)
T d1phka_         260 KRYTAEEALAHPFFQ  274 (277)
T ss_dssp             GSCCHHHHTTSGGGC
T ss_pred             HCcCHHHHHcCHHHH
Confidence            999999999999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1e-16  Score=101.28  Aligned_cols=84  Identities=18%  Similarity=0.277  Sum_probs=60.4

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||++ |..||...........+.           .-..+..+..    ....+.+|+.+||+.
T Consensus       212 ~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~-----------~~~~~~~p~~----~~~~l~~li~~cl~~  276 (299)
T d1fgka_         212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK-----------EGHRMDKPSN----CTNELYMMMRDCWHA  276 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-----------TTCCCCCCSS----CCHHHHHHHHHHTCS
T ss_pred             CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHH-----------cCCCCCCCcc----chHHHHHHHHHHccC
Confidence            468999999999999999998 688886555443332221           1111222222    223577999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.++++.+..+..
T Consensus       277 dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         277 VPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHhh
Confidence            99999999999999987654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.6e-16  Score=98.72  Aligned_cols=86  Identities=13%  Similarity=0.233  Sum_probs=58.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCC-CCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||+++..| +...........+   .        .-..+....    .....+.+|+.+||..
T Consensus       188 ~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i---~--------~~~~~~~~~----~~~~~l~~li~~cl~~  252 (283)
T d1mqba_         188 RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---N--------DGFRLPTPM----DCPSAIYQLMMQCWQQ  252 (283)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---H--------TTCCCCCCT----TCBHHHHHHHHHHTCS
T ss_pred             CCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHH---h--------ccCCCCCch----hhHHHHHHHHHHHCcC
Confidence            4688899999999999999996555 4433333222221   1        111112222    2334577999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.++++.+..+...+
T Consensus       253 ~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         253 ERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             STTTSCCHHHHHHHHHHHHHSG
T ss_pred             CHhHCcCHHHHHHHHHHHhhCc
Confidence            9999999999999988776654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1e-16  Score=100.71  Aligned_cols=80  Identities=11%  Similarity=0.211  Sum_probs=56.2

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||||||++|||++ |..||...........+.           .-..+..+..    .+..+.+|+..||..+
T Consensus       188 ~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~-----------~~~~~~~p~~----~~~~l~~li~~cl~~~  252 (285)
T d1u59a_         188 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----------QGKRMECPPE----CPPELYALMSDCWIYK  252 (285)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-----------TTCCCCCCTT----CCHHHHHHHHHTTCSS
T ss_pred             CCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------cCCCCCCCCc----CCHHHHHHHHHHcCCC
Confidence            47789999999999999998 899996544333322221           1111222222    2346679999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.++++.+..
T Consensus       253 p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         253 WEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             GGGSCCHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHH
Confidence            9999999999876653

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.2e-17  Score=101.35  Aligned_cols=85  Identities=12%  Similarity=0.177  Sum_probs=56.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      ++.++||||+||++|||++|+.||...... ......   ..       ..........    ....+.+|+.+||..+|
T Consensus       183 ~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~---~~-------~~~~~~~~~~----~s~~~~~li~~~L~~dP  248 (271)
T d1nvra_         183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW---KE-------KKTYLNPWKK----IDSAPLALLHKILVENP  248 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH---HT-------TCTTSTTGGG----SCHHHHHHHHHHSCSST
T ss_pred             CCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH---hc-------CCCCCCcccc----CCHHHHHHHHHHcCCCh
Confidence            356899999999999999999999543321 111111   00       0000111111    22356689999999999


Q ss_pred             CCCCCHHHHHHHHHHhhhcc
Q 039745           82 AERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      .+||++.++++|+|+.....
T Consensus       249 ~~R~t~~eil~hpwf~~~l~  268 (271)
T d1nvra_         249 SARITIPDIKKDRWYNKPLK  268 (271)
T ss_dssp             TTSCCHHHHTTCTTTTCCCC
T ss_pred             hHCcCHHHHhcCHhhCcCCC
Confidence            99999999999999865443

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.65  E-value=1.4e-16  Score=100.69  Aligned_cols=82  Identities=18%  Similarity=0.170  Sum_probs=57.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCC-CCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||||||++|||+++. +||...........+   ..        -..+..+..    .+..+.+|+.+||..+
T Consensus       218 ~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v---~~--------~~~~~~p~~----~~~~~~~li~~cl~~~  282 (301)
T d1lufa_         218 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV---RD--------GNILACPEN----CPLELYNLMRLCWSKL  282 (301)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---HT--------TCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHH---Hc--------CCCCCCCcc----chHHHHHHHHHHcCCC
Confidence            5889999999999999999985 567655443332222   11        111222222    2346779999999999


Q ss_pred             CCCCCCHHHHHHHHHHhh
Q 039745           81 PAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~   98 (127)
                      |.+||++.++++.+..+.
T Consensus       283 P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         283 PADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             GGGSCCHHHHHHHHHHTT
T ss_pred             hhHCcCHHHHHHHHHHhc
Confidence            999999999999887654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.2e-16  Score=100.05  Aligned_cols=79  Identities=18%  Similarity=0.286  Sum_probs=55.0

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||||+++|||++ |+.||...........+.   .        -..+..+..    .+..+.+|+..||..+
T Consensus       186 ~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~---~--------~~~~~~p~~----~~~~~~~li~~cl~~d  250 (277)
T d1xbba_         186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE---K--------GERMGCPAG----CPREMYDLMNLCWTYD  250 (277)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---T--------TCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHH---c--------CCCCCCCcc----cCHHHHHHHHHHcCCC
Confidence            46789999999999999998 899997554433322221   1        111222222    2346779999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQ   95 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~   95 (127)
                      |.+||++.+++..+.
T Consensus       251 p~~RPs~~~i~~~L~  265 (277)
T d1xbba_         251 VENRPGFAAVELRLR  265 (277)
T ss_dssp             TTTSCCHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhh
Confidence            999999999976443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.64  E-value=7e-17  Score=104.04  Aligned_cols=86  Identities=12%  Similarity=0.172  Sum_probs=59.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+.   ..         ...............+.+|+.+||..||
T Consensus       201 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~---~~---------~~~~~~~~~~~~s~~~~~li~~~L~~dP  268 (350)
T d1koaa2         201 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK---SC---------DWNMDDSAFSGISEDGKDFIRKLLLADP  268 (350)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HT---------CCCSCCGGGGGCCHHHHHHHHHHCCSSG
T ss_pred             CCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH---hC---------CCCCCcccccCCCHHHHHHHHHHccCCh
Confidence            47889999999999999999999996554332222110   00         0111111111223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+|||+.++++|+|+...
T Consensus       269 ~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         269 NTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             GGSCCHHHHHHSTTTSCT
T ss_pred             hHCcCHHHHhcCcccCCC
Confidence            999999999999987543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.9e-17  Score=103.32  Aligned_cols=86  Identities=13%  Similarity=0.207  Sum_probs=59.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|+|++|..||...........+.   ...         ..............+.+|+.+||..||
T Consensus       179 ~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~---~~~---------~~~~~~~~~~~s~~~~~li~~~L~~dp  246 (321)
T d1tkia_         179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM---NAE---------YTFDEEAFKEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HTC---------CCCCHHHHTTSCHHHHHHHHTTSCSSG
T ss_pred             CCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC---------CCCChhhccCCCHHHHHHHHHHccCCh
Confidence            36789999999999999999999997555433222210   000         001110001122356799999999999


Q ss_pred             CCCCCHHHHHHHHHHhhh
Q 039745           82 AERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+||++.++++|+|+...
T Consensus       247 ~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         247 KSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGSCCHHHHHHSHHHHSC
T ss_pred             hHCcCHHHHhcCHhhccC
Confidence            999999999999998654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.64  E-value=4.4e-17  Score=105.05  Aligned_cols=85  Identities=13%  Similarity=0.133  Sum_probs=59.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|..||...........+.   .         ................+.+|+.+||..+|
T Consensus       204 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~---~---------~~~~~~~~~~~~~s~~~~~li~~~L~~dp  271 (352)
T d1koba_         204 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK---R---------CDWEFDEDAFSSVSPEAKDFIKNLLQKEP  271 (352)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---H---------CCCCCCSSTTTTSCHHHHHHHHTTSCSSG
T ss_pred             CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---h---------CCCCCCcccccCCCHHHHHHHHHHccCCh
Confidence            47889999999999999999999996554332221110   0         00111111112223456799999999999


Q ss_pred             CCCCCHHHHHHHHHHhh
Q 039745           82 AERPSVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~~~~   98 (127)
                      .+||++.++++|.|+..
T Consensus       272 ~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         272 RKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             GGSCCHHHHHTSTTTSS
T ss_pred             hHCcCHHHHhcCHhhCC
Confidence            99999999999998753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.6e-17  Score=103.62  Aligned_cols=89  Identities=12%  Similarity=0.171  Sum_probs=58.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||++|+|++|+.||..... .....+..        . ........+..........+.+|+.+||..+
T Consensus       189 ~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~--------~-i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  259 (335)
T d2ozaa1         189 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--------R-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE  259 (335)
T ss_dssp             GGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------------C-CCSCSSSCCTTHHHHSCHHHHHHHHHHSCSS
T ss_pred             CCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHH--------H-HhcCCCCCCCcccccCCHHHHHHHHHHccCC
Confidence            378899999999999999999999954332 11111110        0 0000111111112233456789999999999


Q ss_pred             CCCCCCHHHHHHHHHHhhh
Q 039745           81 PAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~~~   99 (127)
                      |.+||++.++++|.|+...
T Consensus       260 P~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         260 PTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             TTTSCCHHHHHHSHHHHTT
T ss_pred             hhHCcCHHHHHcCHHhhCC
Confidence            9999999999999998543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.63  E-value=1.3e-16  Score=100.12  Aligned_cols=96  Identities=22%  Similarity=0.324  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhc------------CCcCcccccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMV------------DPAVNKACLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~   68 (127)
                      .++.++||||+||+++||++|+.||... ....+..+....+...........            .+.............
T Consensus       177 ~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  256 (286)
T d1ob3a_         177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDES  256 (286)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHH
T ss_pred             CCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHH
Confidence            3688999999999999999999999644 333344443322221110000000            000001111112346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      +.+|+.+||+.||.+||+++++++|+|+.
T Consensus       257 ~~dli~~~L~~dP~~R~s~~ell~Hp~f~  285 (286)
T d1ob3a_         257 GIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (286)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            67999999999999999999999998864

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.7e-16  Score=99.97  Aligned_cols=97  Identities=16%  Similarity=0.132  Sum_probs=60.4

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhc---------CCcCcccccH------HH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMV---------DPAVNKACLD------ES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~------~~   65 (127)
                      .|+.++||||+||+++||++|+.||.... ......+................         ..........      ..
T Consensus       198 ~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (318)
T d3blha1         198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVR  277 (318)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHC
T ss_pred             CCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccC
Confidence            37899999999999999999999996443 33333333222221110000000         0000000000      11


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ...+.+|+.+||..||.+|+|+.+++.|+||..
T Consensus       278 ~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         278 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            235678999999999999999999999999753

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4e-16  Score=98.91  Aligned_cols=86  Identities=17%  Similarity=0.242  Sum_probs=59.7

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCC-CCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||++|. +||.......+...+           ..-..+.....    ....+.+|+.+||..
T Consensus       201 ~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i-----------~~~~~~~~~~~----~~~~~~~li~~cl~~  265 (309)
T d1fvra_         201 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----------PQGYRLEKPLN----CDDEVYDLMRQCWRE  265 (309)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG-----------GGTCCCCCCTT----BCHHHHHHHHHHTCS
T ss_pred             CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHH-----------HhcCCCCCCcc----CCHHHHHHHHHHcCC
Confidence            35788999999999999999965 456554443332221           11111222222    234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhhcc
Q 039745           80 NPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      +|.+||++.++++++..+.+..
T Consensus       266 dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         266 KPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHSS
T ss_pred             ChhHCcCHHHHHHHHHHHHhcC
Confidence            9999999999999998876543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.62  E-value=3.7e-16  Score=101.13  Aligned_cols=83  Identities=10%  Similarity=0.126  Sum_probs=57.7

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||..........+..         .........+...+    ..+.+|+.+||..||
T Consensus       182 ~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~---------~~~~~~~~~~~~~s----~~~~~li~~~L~~dP  248 (364)
T d1omwa3         182 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---------MTLTMAVELPDSFS----PELRSLLEGLLQRDV  248 (364)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHH---------HSSSCCCCCCSSSC----HHHHHHHHHHTCSST
T ss_pred             CCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---------hcccCCCCCCCCCC----HHHHHHHHHHcccCH
Confidence            37899999999999999999999996543322222221         00011112222222    356799999999999


Q ss_pred             CCCCC-----HHHHHHHHHHh
Q 039745           82 AERPS-----VEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~   97 (127)
                      .+||+     ++++++|.||.
T Consensus       249 ~~R~t~~~~~a~eil~Hp~f~  269 (364)
T d1omwa3         249 NRRLGCLGRGAQEVKESPFFR  269 (364)
T ss_dssp             TTSTTTSSSTHHHHHTSGGGT
T ss_pred             HHhCCCcccCHHHHHcCcccc
Confidence            99999     69999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.8e-16  Score=101.20  Aligned_cols=97  Identities=21%  Similarity=0.305  Sum_probs=64.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhcC----CcC--------cccccHHHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMVD----PAV--------NKACLDESLKT   68 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--------~~~~~~~~~~~   68 (127)
                      .|+.++||||+||+++||++|+.||... ....+..+....+............    ...        ...........
T Consensus       199 ~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  278 (350)
T d1q5ka_         199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE  278 (350)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHH
T ss_pred             CCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHH
Confidence            4789999999999999999999999543 3444455544333332222221111    000        00111122345


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +.+|+.+||..||.+|||+.++++|.|+..
T Consensus       279 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         279 AIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            779999999999999999999999998754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.3e-16  Score=98.48  Aligned_cols=81  Identities=16%  Similarity=0.218  Sum_probs=55.5

Q ss_pred             CCCCchhHHHHHHHHHHHHh-CCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIV-GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||||+++|||++ |+.||...........+   .       ..-..+.....    .+..+.+|+.+||..+
T Consensus       190 ~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i---~-------~~~~~~~~~~~----~~~~l~~li~~cl~~d  255 (273)
T d1u46a_         190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---D-------KEGERLPRPED----CPQDIYNVMVQCWAHK  255 (273)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---H-------TSCCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHH---H-------hCCCCCCCccc----ccHHHHHHHHHHcCCC
Confidence            35678999999999999998 89999655443332221   0       01111111122    2235679999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.++++.+..
T Consensus       256 p~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         256 PEDRPTFVALRDFLLE  271 (273)
T ss_dssp             GGGSCCHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHh
Confidence            9999999999876654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.6e-16  Score=98.77  Aligned_cols=84  Identities=17%  Similarity=0.256  Sum_probs=56.3

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.++.++||||||+++|||++|..|+.... .......+   ....        .+..+.    .....+.+|+.+||..
T Consensus       209 ~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i---~~g~--------~~~~p~----~~~~~l~~li~~cl~~  273 (311)
T d1r0pa_         209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL---LQGR--------RLLQPE----YCPDPLYEVMLKCWHP  273 (311)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHH---HTTC--------CCCCCT----TCCHHHHHHHHHHTCS
T ss_pred             CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHH---HcCC--------CCCCcc----cCcHHHHHHHHHHcCC
Confidence            468899999999999999999777764322 11111111   1111        111111    1234577999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.++++++..+..
T Consensus       274 dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         274 KAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHH
Confidence            99999999999999987654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.5e-15  Score=95.77  Aligned_cols=84  Identities=17%  Similarity=0.266  Sum_probs=57.8

Q ss_pred             CCCCCchhHHHHHHHHHHHHhC-CCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVG-RPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g-~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      +.|+.++||||+||++|||+++ ..||..... ......+           ..-..+..+...    ...+.+|+.+||.
T Consensus       211 ~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~~~l~~li~~cl~  275 (299)
T d1ywna1         211 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-----------KEGTRMRAPDYT----TPEMYQTMLDCWH  275 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH-----------HHTCCCCCCTTC----CHHHHHHHHHHTC
T ss_pred             CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----------hcCCCCCCCccC----CHHHHHHHHHHcC
Confidence            3588999999999999999986 456754332 2222222           111112222222    2356799999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhhh
Q 039745           79 KNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      .+|.+||++.++++|+..+.+
T Consensus       276 ~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         276 GEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhHCcCHHHHHHHHHHHHh
Confidence            999999999999999987654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.2e-17  Score=103.51  Aligned_cols=80  Identities=21%  Similarity=0.415  Sum_probs=58.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||.......+...+.            ...+..+...    ...+.+|+.+||..+|
T Consensus       179 ~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~------------~~~~~~p~~~----s~~~~dli~~~L~~dP  242 (320)
T d1xjda_         179 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR------------MDNPFYPRWL----EKEAKDLLVKLFVREP  242 (320)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------------HCCCCCCTTS----CHHHHHHHHHHSCSSG
T ss_pred             CCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH------------cCCCCCCccC----CHHHHHHHHHhcccCC
Confidence            57899999999999999999999997655443332221            0112222222    2356799999999999


Q ss_pred             CCCCCHH-HHHHHHHHh
Q 039745           82 AERPSVE-DVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp~~~-~~~~~~~~~   97 (127)
                      .+||++. ++++|+|+.
T Consensus       243 ~~R~s~~~~l~~hpff~  259 (320)
T d1xjda_         243 EKRLGVRGDIRQHPLFR  259 (320)
T ss_dssp             GGSBTTBSCGGGSGGGT
T ss_pred             CCCcCHHHHHHhCchhc
Confidence            9999985 799998864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.7e-16  Score=98.12  Aligned_cols=95  Identities=21%  Similarity=0.268  Sum_probs=60.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCch-hHHHHHHHHHHHHhhchHHHhhhc-C----C---cCccc----ccHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRK-EVDLLKNQLQAVITADESARRSMV-D----P---AVNKA----CLDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~----~---~~~~~----~~~~~~~~~   69 (127)
                      ++.++|+||+||++|+|++|+.||... ....+..+................ .    .   .....    ........+
T Consensus       180 ~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  259 (298)
T d1gz8a_         180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG  259 (298)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHH
T ss_pred             CCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHH
Confidence            578999999999999999999999543 334444444322222111111100 0    0   00000    001112467


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      .+|+.+||..||.+|||+.++++|.|+.
T Consensus       260 ~dll~~mL~~dP~~R~t~~ell~H~ff~  287 (298)
T d1gz8a_         260 RSLLSQMLHYDPNKRISAKAALAHPFFQ  287 (298)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHccCChhHCcCHHHHhCCHhhc
Confidence            7999999999999999999999998863

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.7e-16  Score=96.32  Aligned_cols=80  Identities=16%  Similarity=0.248  Sum_probs=53.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCC-CCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPL-KSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++|||||||++|||++|..| +...........+           .....+..+..    ....+.+|+.+||..+
T Consensus       186 ~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i-----------~~~~~~~~p~~----~~~~l~~li~~cl~~~  250 (272)
T d1qpca_         186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPDN----CPEELYQLMRLCWKER  250 (272)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-----------HTTCCCCCCTT----CCHHHHHHHHHHTCSS
T ss_pred             CCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHH-----------HhcCCCCCccc----ChHHHHHHHHHHcCCC
Confidence            578899999999999999996555 4433332222111           11111222222    2335679999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 039745           81 PAERPSVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~   96 (127)
                      |.+||++.++++.+..
T Consensus       251 P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         251 PEDRPTFDYLRSVLED  266 (272)
T ss_dssp             GGGSCCHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhh
Confidence            9999999999986653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=1e-15  Score=96.14  Aligned_cols=83  Identities=19%  Similarity=0.275  Sum_probs=57.0

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++|||||||++|||+++..|+ ...........+.           .-..+..+..    ....+.+|+.+||..
T Consensus       191 ~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~-----------~~~~~~~~~~----~~~~l~~li~~cl~~  255 (287)
T d1opja_         191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG----CPEKVYELMRACWQW  255 (287)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-----------TTCCCCCCTT----CCHHHHHHHHHHTCS
T ss_pred             CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHh-----------cCCCCCCCcc----chHHHHHHHHHHcCC
Confidence            46889999999999999999976664 4444333322221           1111222222    234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhh
Q 039745           80 NPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~   98 (127)
                      +|.+||++.++++.+..+.
T Consensus       256 dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         256 NPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             SGGGSCCHHHHHHHHHHTT
T ss_pred             CHhHCcCHHHHHHHHHHHH
Confidence            9999999999988776543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.7e-15  Score=97.27  Aligned_cols=97  Identities=18%  Similarity=0.268  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHHhh-----------hcCC---cCcccccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESARRS-----------MVDP---AVNKACLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~~~~~   66 (127)
                      .++.++||||+||+++||++|+.||.... ...+..+..............           ....   ...........
T Consensus       195 ~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  274 (346)
T d1cm8a_         195 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNAS  274 (346)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCC
T ss_pred             CCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCC
Confidence            36789999999999999999999996443 333333332222111110000           0000   00001111223


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ..+.+|+.+||..||.+|||+.++++|+|+..
T Consensus       275 ~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         275 PLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence            35679999999999999999999999998754

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.9e-16  Score=99.53  Aligned_cols=78  Identities=13%  Similarity=0.215  Sum_probs=54.2

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+   ..         .....+...+    ..+.+|+.+||..||
T Consensus       186 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i---~~---------~~~~~p~~~s----~~~~~li~~~L~~dP  249 (288)
T d1uu3a_         186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI---IK---------LEYDFPEKFF----PKARDLVEKLLVLDA  249 (288)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HT---------TCCCCCTTCC----HHHHHHHHTTSCSSG
T ss_pred             CCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHH---Hc---------CCCCCCccCC----HHHHHHHHHHccCCH
Confidence            4788999999999999999999999755433322211   00         0111222222    356799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+|||+.+++.+.+
T Consensus       250 ~~R~t~~e~~~~~~  263 (288)
T d1uu3a_         250 TKRLGCEEMEGYGP  263 (288)
T ss_dssp             GGSTTSGGGTCHHH
T ss_pred             hHCcCHHHHcCCHH
Confidence            99999998655444

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.7e-16  Score=99.29  Aligned_cols=81  Identities=15%  Similarity=0.245  Sum_probs=58.9

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||.......+...+.   .         .....+...+    ..+.+|+.+||..||
T Consensus       181 ~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~---~---------~~~~~p~~~s----~~~~dli~~~L~~dP  244 (337)
T d1o6la_         181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL---M---------EEIRFPRTLS----PEAKSLLAGLLKKDP  244 (337)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---H---------CCCCCCTTSC----HHHHHHHHHHTCSST
T ss_pred             CCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHh---c---------CCCCCCccCC----HHHHHHHHhhccCCc
Confidence            48899999999999999999999997655443332220   0         1122222223    356699999999999


Q ss_pred             CCCCC-----HHHHHHHHHHhh
Q 039745           82 AERPS-----VEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp~-----~~~~~~~~~~~~   98 (127)
                      .+|++     ++++++|+||..
T Consensus       245 ~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         245 KQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             TTSTTCSTTTHHHHHTSGGGTT
T ss_pred             hhhcccccccHHHHHcCccccc
Confidence            99994     899999998743

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=6.8e-16  Score=99.37  Aligned_cols=81  Identities=14%  Similarity=0.200  Sum_probs=57.8

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|..||...........+   ..         ..+..+...+    ..+.+|+.+||..||
T Consensus       214 ~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i---~~---------~~~~~p~~~s----~~~~~li~~~L~~dP  277 (350)
T d1rdqe_         214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI---VS---------GKVRFPSHFS----SDLKDLLRNLLQVDL  277 (350)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HH---------CCCCCCTTCC----HHHHHHHHHHSCSCT
T ss_pred             CCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHH---hc---------CCCCCCccCC----HHHHHHHHHHhhhCH
Confidence            4788999999999999999999999755443322222   00         0111222222    356699999999999


Q ss_pred             CCCC-----CHHHHHHHHHHhh
Q 039745           82 AERP-----SVEDVLWNLQFAA   98 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~~   98 (127)
                      .+|+     +++++++|.||..
T Consensus       278 ~kR~~~~r~t~~ell~Hp~f~~  299 (350)
T d1rdqe_         278 TKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HhccccccccHHHHHcCccccC
Confidence            9994     8999999999743

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=9.2e-16  Score=97.77  Aligned_cols=83  Identities=14%  Similarity=0.297  Sum_probs=55.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDL-LKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .++.++||||+||++|||++|+.||....... ...+.....         ...+..+..    ....+.+|+.+||..+
T Consensus       208 ~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~---------~~~~~~~~~----~s~~~~~li~~~l~~d  274 (322)
T d1vzoa_         208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL---------KSEPPYPQE----MSALAKDLIQRLLMKD  274 (322)
T ss_dssp             --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH---------HCCCCCCTT----SCHHHHHHHHHHTCSS
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc---------cCCCCCccc----CCHHHHHHHHHHcccC
Confidence            36779999999999999999999995433221 222211100         111222222    2346679999999999


Q ss_pred             CCCCC-----CHHHHHHHHHHh
Q 039745           81 PAERP-----SVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp-----~~~~~~~~~~~~   97 (127)
                      |.+|+     +++++++|+|+.
T Consensus       275 P~~R~s~~~~t~~eil~Hpff~  296 (322)
T d1vzoa_         275 PKKRLGCGPRDADEIKEHLFFQ  296 (322)
T ss_dssp             GGGSTTSSTTTHHHHHTSGGGT
T ss_pred             HHHcCCCCcccHHHHHcCHhhc
Confidence            99998     489999999974

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.57  E-value=2.5e-15  Score=93.84  Aligned_cols=82  Identities=21%  Similarity=0.341  Sum_probs=54.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLL-KNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+||++|||++|+.||........ ..++   ..          .+..........+..+.+|+.+||..|
T Consensus       190 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~s~~l~~li~~~L~~d  256 (277)
T d1o6ya_         190 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV---RE----------DPIPPSARHEGLSADLDAVVLKALAKN  256 (277)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---HC----------CCCCGGGTSSSCCHHHHHHHHHHTCSS
T ss_pred             CCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHH---hc----------CCCCCchhccCCCHHHHHHHHHHccCC
Confidence            478899999999999999999999965543322 1111   00          011111111122345679999999999


Q ss_pred             CCCCC-CHHHHHHHHHH
Q 039745           81 PAERP-SVEDVLWNLQF   96 (127)
Q Consensus        81 p~~Rp-~~~~~~~~~~~   96 (127)
                      |.+|| ++++++..+..
T Consensus       257 p~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         257 PENRYQTAAEMRADLVR  273 (277)
T ss_dssp             GGGSCSSHHHHHHHHHH
T ss_pred             HhHCHhHHHHHHHHHHH
Confidence            99998 68887766554

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.57  E-value=9.5e-16  Score=97.49  Aligned_cols=80  Identities=15%  Similarity=0.229  Sum_probs=57.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||++|||++|+.||...........+.   .         .....+...+    ..+.+++.+||..+|
T Consensus       177 ~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~---~---------~~~~~p~~~s----~~~~~li~~~L~~dp  240 (316)
T d1fota_         177 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL---N---------AELRFPPFFN----EDVKDLLSRLITRDL  240 (316)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---H---------CCCCCCTTSC----HHHHHHHHHHTCSCT
T ss_pred             CCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHH---c---------CCCCCCCCCC----HHHHHHHHHHhhhCH
Confidence            47899999999999999999999997555433322210   0         0111111222    356699999999999


Q ss_pred             CCCC-----CHHHHHHHHHHh
Q 039745           82 AERP-----SVEDVLWNLQFA   97 (127)
Q Consensus        82 ~~Rp-----~~~~~~~~~~~~   97 (127)
                      .+|+     +++++++|+|+.
T Consensus       241 ~~R~~~~r~t~~~il~Hp~f~  261 (316)
T d1fota_         241 SQRLGNLQNGTEDVKNHPWFK  261 (316)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGS
T ss_pred             HhccccchhhHHHHHcCcccc
Confidence            9996     899999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.8e-15  Score=94.08  Aligned_cols=81  Identities=20%  Similarity=0.316  Sum_probs=54.9

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCC-CchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGRPLK-SRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.++.++||||||+++|||++|..|+ ...........+           .....+.....    ....+.+|+.+||+.
T Consensus       189 ~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i-----------~~~~~~~~~~~----~~~~l~~li~~cl~~  253 (285)
T d1fmka3         189 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-----------ERGYRMPCPPE----CPESLHDLMCQCWRK  253 (285)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-----------HTTCCCCCCTT----SCHHHHHHHHHHTCS
T ss_pred             CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH-----------HhcCCCCCCcc----cCHHHHHHHHHHccc
Confidence            46889999999999999999966664 433332222222           11111222222    234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 039745           80 NPAERPSVEDVLWNLQF   96 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~   96 (127)
                      +|.+||++.+++..+..
T Consensus       254 dP~~Rps~~~i~~~L~~  270 (285)
T d1fmka3         254 EPEERPTFEYLQAFLED  270 (285)
T ss_dssp             SGGGSCCHHHHHHHHHT
T ss_pred             CHhHCcCHHHHHHHHhh
Confidence            99999999999876653

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.9e-15  Score=95.96  Aligned_cols=98  Identities=17%  Similarity=0.262  Sum_probs=63.3

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHhhchHHH-------hh---------------hcCCcC-
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKE-VDLLKNQLQAVITADESAR-------RS---------------MVDPAV-   57 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~-------~~---------------~~~~~~-   57 (127)
                      .++.++||||+||+++||++|+.||.... ......+............       ..               ...... 
T Consensus       194 ~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (355)
T d2b1pa1         194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF  273 (355)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGS
T ss_pred             CCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccc
Confidence            47889999999999999999999985433 3333333322221111110       00               000000 


Q ss_pred             --cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 039745           58 --NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        58 --~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~   99 (127)
                        ...........+.+|+.+||..||++|||++++++|+|+...
T Consensus       274 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         274 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence              001123345678899999999999999999999999998764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.9e-15  Score=94.90  Aligned_cols=84  Identities=17%  Similarity=0.239  Sum_probs=57.3

Q ss_pred             CCCCCchhHHHHHHHHHHHHhCC-CCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhccc
Q 039745            1 GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLK   79 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   79 (127)
                      +.|+.++||||||+++|||++|. .|+...........+   ...        ..+..+.    .....+.+++.+||..
T Consensus       210 ~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i---~~~--------~~~~~p~----~~~~~l~~li~~cl~~  274 (308)
T d1p4oa_         210 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV---MEG--------GLLDKPD----NCPDMLFELMRMCWQY  274 (308)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH---HTT--------CCCCCCT----TCCHHHHHHHHHHTCS
T ss_pred             CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HhC--------CCCCCcc----cchHHHHHHHHHHcCC
Confidence            35788999999999999999974 667554433322222   111        0111111    2234677999999999


Q ss_pred             CCCCCCCHHHHHHHHHHhhh
Q 039745           80 NPAERPSVEDVLWNLQFAAQ   99 (127)
Q Consensus        80 ~p~~Rp~~~~~~~~~~~~~~   99 (127)
                      +|.+||++.++++++....+
T Consensus       275 ~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         275 NPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             SGGGSCCHHHHHHHHGGGSC
T ss_pred             ChhHCcCHHHHHHHHHHhcC
Confidence            99999999999998765433

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.3e-16  Score=99.56  Aligned_cols=73  Identities=14%  Similarity=0.284  Sum_probs=53.9

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCCC
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNPA   82 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~   82 (127)
                      ++.++||||+||++|||++|+.||.....     +.         ..    ........+    ..+.+|+.+||..||.
T Consensus       187 ~~~~~DiwSlGvilyell~g~~Pf~~~~~-----i~---------~~----~~~~~~~~s----~~~~~li~~~L~~dp~  244 (273)
T d1xwsa_         187 HGRSAAVWSLGILLYDMVCGDIPFEHDEE-----II---------RG----QVFFRQRVS----SECQHLIRWCLALRPS  244 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH---------HC----CCCCSSCCC----HHHHHHHHHHTCSSGG
T ss_pred             CCcccccccceeeehhHhhCCCCCCCchH-----Hh---------hc----ccCCCCCCC----HHHHHHHHHHccCCHh
Confidence            35678999999999999999999964321     11         00    011112222    3567999999999999


Q ss_pred             CCCCHHHHHHHHHHh
Q 039745           83 ERPSVEDVLWNLQFA   97 (127)
Q Consensus        83 ~Rp~~~~~~~~~~~~   97 (127)
                      +|||+.++++|+|+.
T Consensus       245 ~R~s~~eil~hp~~~  259 (273)
T d1xwsa_         245 DRPTFEEIQNHPWMQ  259 (273)
T ss_dssp             GSCCHHHHHTSGGGS
T ss_pred             HCcCHHHHhcCHhhC
Confidence            999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.4e-14  Score=91.82  Aligned_cols=83  Identities=13%  Similarity=0.259  Sum_probs=56.2

Q ss_pred             CCCCCchhHHHHHHHHHHHHh-CCCCCCchhH-HHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcc
Q 039745            1 GKLEDKIDIYDFGLILLEIIV-GRPLKSRKEV-DLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLL   78 (127)
Q Consensus         1 ~~~~~~~Diws~G~~~~e~~~-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   78 (127)
                      +.++.++||||||+++|||++ |.+++..... ..+..++.           .-..+....    .....+.+|+.+||.
T Consensus       222 ~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~-----------~~~~~~~~~----~~~~~l~~Li~~cl~  286 (311)
T d1t46a_         222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-----------EGFRMLSPE----HAPAEMYDIMKTCWD  286 (311)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH-----------HTCCCCCCT----TSCHHHHHHHHHHTC
T ss_pred             CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----------cCCCCCCcc----cccHHHHHHHHHHcC
Confidence            457899999999999999998 5555543322 22333321           111122221    123457799999999


Q ss_pred             cCCCCCCCHHHHHHHHHHhh
Q 039745           79 KNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        79 ~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .+|.+||++.++++.+....
T Consensus       287 ~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         287 ADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             SSGGGSCCHHHHHHHHHHHH
T ss_pred             CChhHCcCHHHHHHHHHHhh
Confidence            99999999999999887543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.1e-15  Score=96.87  Aligned_cols=96  Identities=20%  Similarity=0.248  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHH-HHHHHHHHHHhhchHHHhhh---------cC--CcCcccc----cHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVD-LLKNQLQAVITADESARRSM---------VD--PAVNKAC----LDES   65 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~----~~~~   65 (127)
                      .++.++||||+||++++|++|+.||...... ....+......... .....         ..  .......    ....
T Consensus       195 ~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (348)
T d2gfsa1         195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA-ELLKKISSESARNYIQSLTQMPKMNFANVFIGA  273 (348)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH-HHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTC
T ss_pred             cCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh-HHhhhccchhhhhhhhhcccCCCcchhhhcCCC
Confidence            3678999999999999999999999654433 23333322222111 11000         00  0000000    0112


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           66 LKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        66 ~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      ...+.+|+.+||..||.+|||+.++++|+|+..
T Consensus       274 s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~  306 (348)
T d2gfsa1         274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  306 (348)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCC
Confidence            345679999999999999999999999999764

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.1e-14  Score=93.55  Aligned_cols=100  Identities=23%  Similarity=0.302  Sum_probs=61.0

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-HHHHHHHHHHHhhchHHHhhh----------cCCcCccc----ccHHHH
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-DLLKNQLQAVITADESARRSM----------VDPAVNKA----CLDESL   66 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~   66 (127)
                      .|+.++||||+||+++||++|+.||..... .....................          ..+.....    ......
T Consensus       189 ~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  268 (345)
T d1pmea_         189 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNAD  268 (345)
T ss_dssp             SCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSC
T ss_pred             CCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCC
Confidence            367899999999999999999999964432 222222222221111100000          00100000    001112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhcc
Q 039745           67 KTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQ  101 (127)
Q Consensus        67 ~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~~  101 (127)
                      ..+.+|+.+||..||.+||++.++++|+|+.....
T Consensus       269 ~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         269 SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence            35779999999999999999999999998764433

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.2e-15  Score=94.58  Aligned_cols=95  Identities=26%  Similarity=0.268  Sum_probs=58.0

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCC-chhH-HHHHHHHHHHHhhchHHHhhhc---C-------Cc--CcccccHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKS-RKEV-DLLKNQLQAVITADESARRSMV---D-------PA--VNKACLDESLKT   68 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~---~-------~~--~~~~~~~~~~~~   68 (127)
                      ++.++||||+||+++||++|+.||. .... .....+................   .       +.  ............
T Consensus       179 ~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  258 (292)
T d1unla_         179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNAT  258 (292)
T ss_dssp             CCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHH
T ss_pred             CCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHH
Confidence            6789999999999999999998863 3332 2223222222211110000000   0       00  000011122345


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 039745           69 MMEVCVRCLLKNPAERPSVEDVLWNLQFA   97 (127)
Q Consensus        69 ~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~   97 (127)
                      +.+|+.+||+.||.+|||++++++|+|+.
T Consensus       259 ~~dll~~mL~~dP~~R~sa~e~L~Hp~f~  287 (292)
T d1unla_         259 GRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTSGGGS
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcChhhc
Confidence            77999999999999999999999999874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=7.3e-15  Score=92.84  Aligned_cols=91  Identities=20%  Similarity=0.240  Sum_probs=58.5

Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCchhHH------------HHHHHHHHHHhhchHHHhhhcCCcCcccc-cHHHHHHH
Q 039745            3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVD------------LLKNQLQAVITADESARRSMVDPAVNKAC-LDESLKTM   69 (127)
Q Consensus         3 ~~~~~Diws~G~~~~e~~~g~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   69 (127)
                      ++.++|||||||++|||++|..|+......            ....+...       .......|.+.... .......+
T Consensus       195 ~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~p~~~~~~~~~~~~~~l  267 (303)
T d1vjya_         195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV-------VCEQKLRPNIPNRWQSCEALRVM  267 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH-------HTTSCCCCCCCGGGGGCHHHHHH
T ss_pred             cCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHH-------HhccccCCCCCcccCChHHHHHH
Confidence            456899999999999999998775321100            00001000       11112223332222 23455668


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHHhhhc
Q 039745           70 MEVCVRCLLKNPAERPSVEDVLWNLQFAAQV  100 (127)
Q Consensus        70 ~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~~~  100 (127)
                      .+|+.+||..+|.+||++.+++++|..+...
T Consensus       268 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         268 AKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            8999999999999999999999999876543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.51  E-value=9.8e-15  Score=93.06  Aligned_cols=97  Identities=12%  Similarity=0.116  Sum_probs=59.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCch--hHHHHHHHHHHHHhhchHHHhh------------hcCCc--------Ccc
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRK--EVDLLKNQLQAVITADESARRS------------MVDPA--------VNK   59 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~------------~~~~~--------~~~   59 (127)
                      .|+.++||||+||+++|+++|+.||...  ...+...+....+.........            .....        ...
T Consensus       206 ~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (328)
T d3bqca1         206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS  285 (328)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCT
T ss_pred             CCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccc
Confidence            3688999999999999999999998532  2222222222221111100000            00000        000


Q ss_pred             cccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        60 ~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                      .........+.+|+.+||..||.+|||++++++|+||..
T Consensus       286 ~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~  324 (328)
T d3bqca1         286 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  324 (328)
T ss_dssp             TTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            011112345779999999999999999999999999753

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=2.1e-14  Score=92.44  Aligned_cols=97  Identities=13%  Similarity=0.143  Sum_probs=60.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhH-------HHHHHHHHHHHhhchHHHhh------hcC---------CcC--
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEV-------DLLKNQLQAVITADESARRS------MVD---------PAV--   57 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~---------~~~--   57 (127)
                      .|+.++|+||+||+++||++|+.||.....       ..+.......+.........      ..+         ...  
T Consensus       205 ~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (362)
T d1q8ya_         205 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW  284 (362)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred             CCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCC
Confidence            578999999999999999999999853221       12222222222211111100      000         000  


Q ss_pred             --------cccccHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 039745           58 --------NKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAA   98 (127)
Q Consensus        58 --------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp~~~~~~~~~~~~~   98 (127)
                              ...........+.+|+.+||..||.+|||+.++++|+||..
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~  333 (362)
T d1q8ya_         285 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  333 (362)
T ss_dssp             CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             chhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCC
Confidence                    01123455667889999999999999999999999999863

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.50  E-value=9.9e-15  Score=91.96  Aligned_cols=86  Identities=7%  Similarity=0.038  Sum_probs=51.1

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchHHHhhhcCCcCcccccHHHHHHHHHHHHHhcccCC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVRCLLKNP   81 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   81 (127)
                      .|+.++||||+||+++||++|+.||..................   .... ..+...    ...+..+.+|+..||..+|
T Consensus       189 ~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~----~~~p~~~~~li~~cl~~~p  260 (299)
T d1ckia_         189 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK---KMST-PIEVLC----KGYPSEFATYLNFCRSLRF  260 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHH---HHHS-CHHHHT----TTSCHHHHHHHHHHHHSCT
T ss_pred             CCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcc---cCCC-ChhHhc----cCCCHHHHHHHHHHccCCh
Confidence            3788999999999999999999999643322221111100000   0000 000001    1122356799999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 039745           82 AERPSVEDVLWNLQ   95 (127)
Q Consensus        82 ~~Rp~~~~~~~~~~   95 (127)
                      .+||++.++.+.+.
T Consensus       261 ~~RP~~~~i~~~l~  274 (299)
T d1ckia_         261 DDKPDYSYLRQLFR  274 (299)
T ss_dssp             TCCCCHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHH
Confidence            99999987655443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.37  E-value=3.5e-13  Score=84.68  Aligned_cols=87  Identities=8%  Similarity=0.001  Sum_probs=53.6

Q ss_pred             CCCCchhHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhchH-HHhhhcCCcCcccccHHHHHHHHHHHHHhcccC
Q 039745            2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADES-ARRSMVDPAVNKACLDESLKTMMEVCVRCLLKN   80 (127)
Q Consensus         2 ~~~~~~Diws~G~~~~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~   80 (127)
                      .|+.++||||+|++++||++|+.||..................... ...++ .        ...+..+.+++..|+..+
T Consensus       189 ~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l-~--------~~~p~~l~~ii~~~~~~~  259 (293)
T d1csna_         189 EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL-C--------AGFPEEFYKYMHYARNLA  259 (293)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH-T--------TTSCHHHHHHHHHHHHCC
T ss_pred             CCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh-c--------CCCCHHHHHHHHHHhcCC
Confidence            4788999999999999999999999633221111111100000000 00010 0        111235678999999999


Q ss_pred             CCCCCCHHHHHHHHHHh
Q 039745           81 PAERPSVEDVLWNLQFA   97 (127)
Q Consensus        81 p~~Rp~~~~~~~~~~~~   97 (127)
                      |.+||+++.+.+.+...
T Consensus       260 ~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         260 FDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             TTCCCCHHHHHHHHHHH
T ss_pred             cccCcCHHHHHHHHHHH
Confidence            99999988877655543