Citrus Sinensis ID: 039843

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPEFMSISGDNYNGRFKLDEYIRNAEKFSSQ
cHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHccccccccccccHHHHHcccccHHHHcccccccccccHHHHHHHHHcccccc
cHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccHHHcccccccccccccccccccccccccHHHHHHHHHHcccccccccccccEcHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcEEEEEEcccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcHHHcccEEcccccccccccccEEccccccccccccccEEEEcccccHHHHHHHHHHHHHccccccccccccHHHHHHccccccHHHHcccccccccEHHHHHHHHHHcccc
FIFCFllffdsrilvpaisqsesikLEKHVALfgfgdslydpgnnnflnisigcnyppygetyfkfptgrcsdghliPYFIAKFAsagagvlpatnpgtlnLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIggrkfafqnvapmgclpftkqeynlkeneclpavtglsilrnnGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINplkygfkeadiaccgsgiyrgpncgigefelcsnpneylffdghhptehgYSQFAKLLwdggemnvtvplSLKQLfeieiepefmsisgdnyngrfkldEYIRNAEKFSSQ
FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLssiggqelvnWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPefmsisgdnyngRFKLDEYIRNAEKFSSQ
FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPEFMSISGDNYNGRFKLDEYIRNAEKFSSQ
*IFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPEFMSISGDNYNGRFKLDEYI*********
FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLR*******V*KLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPEFMSISGDNYNGRFKLDEYIR*A******
FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPEFMSISGDNYNGRFKLDEYIRNAEKFSSQ
FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPEFMSISGDNYNGRFKLDEYIRNAEKF***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAKFASAGAGVLPATNPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEIEIEPEFMSISGDNYNGRFKLDEYIRNAEKFSSQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query348 2.2.26 [Sep-21-2011]
Q9FLN0374 GDSL esterase/lipase 1 OS yes no 0.830 0.772 0.413 2e-60
Q9SYF0376 GDSL esterase/lipase 2 OS no no 0.816 0.755 0.426 2e-58
Q9LJP1377 GDSL esterase/lipase 4 OS no no 0.859 0.793 0.385 1e-57
Q9SSA7385 GDSL esterase/lipase 5 OS no no 0.821 0.742 0.387 3e-57
Q9SYF5367 GDSL esterase/lipase 3 OS no no 0.836 0.792 0.414 3e-56
P86276343 GDSL esterase/lipase OS=C N/A no 0.775 0.787 0.336 3e-40
Q7XA74417 GDSL esterase/lipase At1g no no 0.787 0.657 0.325 6e-39
Q9LJG3392 GDSL esterase/lipase ESM1 no no 0.784 0.696 0.314 8e-34
Q9C5N8372 GDSL esterase/lipase At1g no no 0.876 0.819 0.295 1e-32
Q9LJP2363 GDSL esterase/lipase At3g no no 0.775 0.743 0.306 6e-31
>sp|Q9FLN0|GLIP1_ARATH GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/343 (41%), Positives = 186/343 (54%), Gaps = 54/343 (15%)

Query: 26  LEKHVALFGFGDSLYDPGNNNFLNI--SIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAK 83
           +    ALF FGDS++D GNNN+++   S+  NY PYG+T FK PTGR SDG LIP FIA+
Sbjct: 32  VTNQSALFVFGDSVFDAGNNNYIDTLSSVRSNYWPYGQTTFKSPTGRVSDGRLIPDFIAE 91

Query: 84  -------------------------FASAGAGVLPATNPG-TLNLEIQLIFFKEVASLLR 117
                                    FAS GAG L  T  G  +NL  QL  FK+V  +LR
Sbjct: 92  YAWLPLIPPNLQPFNGNSQFAYGVNFASGGAGALVGTFSGLVINLRTQLNNFKKVEEMLR 151

Query: 118 QQLADAEVEKLLRNAVYL-------------------SSIGGQELVNWVIGNITDVVKEI 158
            +L DAE ++++  AVYL                    SI  ++ V++V+GN+TDV KE+
Sbjct: 152 SKLGDAEGKRVISRAVYLFHIGLNDYQYPFTTNSSLFQSISNEKYVDYVVGNMTDVFKEV 211

Query: 159 YNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLS 218
           YN+GGRKF   N  P  C P +      K   C   VT L  + N  L    + L  +LS
Sbjct: 212 YNLGGRKFGILNTGPYDCAPASLVIDQTKIRSCFQPVTELINMHNEKLLNGLRRLNHELS 271

Query: 219 DFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGPN-CG--IG---EFELCSNP 272
            FK+ +  ++T+L ER+ +P KYGFKE   ACCGSG  RG N CG  +G    +ELC N 
Sbjct: 272 GFKYALHDYHTSLSERMNDPSKYGFKEGKKACCGSGPLRGINTCGGRMGLSQSYELCENV 331

Query: 273 NEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEI 315
            +YLFFD  H TE    Q A+L+W  G  N+T P +LK LFE+
Sbjct: 332 TDYLFFDPFHLTEKANRQIAELIWS-GPTNITGPYNLKALFEL 373
Confers resistance to the necrotrophic fungus Alternaria brassicicola. Possesses lipase and antimicrobial activities that directly disrupt fungal spore integrity. Triggers systemic resistance, mostly by the ethylene-dependent pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9SYF0|GLIP2_ARATH GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LJP1|GRIP4_ARATH GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2 Back     alignment and function description
>sp|Q9SSA7|GLIP5_ARATH GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2 Back     alignment and function description
>sp|Q9SYF5|GLIP3_ARATH GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2 Back     alignment and function description
>sp|P86276|GDL1_CARPA GDSL esterase/lipase OS=Carica papaya PE=1 SV=1 Back     alignment and function description
>sp|Q7XA74|GDL21_ARATH GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1 Back     alignment and function description
>sp|Q9LJG3|ESM1_ARATH GDSL esterase/lipase ESM1 OS=Arabidopsis thaliana GN=ESM1 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5N8|GDL20_ARATH GDSL esterase/lipase At1g54020 OS=Arabidopsis thaliana GN=At1g54020 PE=2 SV=1 Back     alignment and function description
>sp|Q9LJP2|GDL51_ARATH GDSL esterase/lipase At3g14220 OS=Arabidopsis thaliana GN=At3g14220 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
255586574377 zinc finger protein, putative [Ricinus c 0.902 0.832 0.466 5e-82
225442011364 PREDICTED: GDSL esterase/lipase 1 [Vitis 0.890 0.851 0.468 4e-78
297742946 788 unnamed protein product [Vitis vinifera] 0.896 0.395 0.462 3e-77
255586572381 zinc finger protein, putative [Ricinus c 0.922 0.842 0.453 4e-77
255586576350 zinc finger protein, putative [Ricinus c 0.850 0.845 0.485 1e-75
255586570376 zinc finger protein, putative [Ricinus c 0.844 0.781 0.442 6e-74
225442009394 PREDICTED: GDSL esterase/lipase 1 [Vitis 0.893 0.789 0.461 1e-72
255585076365 zinc finger protein, putative [Ricinus c 0.890 0.849 0.454 2e-72
225442015366 PREDICTED: GDSL esterase/lipase 1 [Vitis 0.899 0.855 0.453 2e-72
225442013371 PREDICTED: GDSL esterase/lipase 1-like [ 0.887 0.832 0.442 4e-72
>gi|255586574|ref|XP_002533922.1| zinc finger protein, putative [Ricinus communis] gi|223526117|gb|EEF28464.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 167/358 (46%), Positives = 214/358 (59%), Gaps = 44/358 (12%)

Query: 1   FIFCFLLFFDSRILVPAISQSESIKLEKHVALFGFGDSLYDPGNNNFLNISI--GCNYPP 58
           F+  FL+   S +      +  S + +KH A+F FGDSLYDPGNNNF+N+ I    N  P
Sbjct: 6   FLSGFLVVVASLLFPVNSHEDNSKQTQKHAAMFVFGDSLYDPGNNNFINVDIHFKANRWP 65

Query: 59  YGETYFKFPTGRCSDGHLIPYFIA-----------------------KFASAGAGVLPAT 95
           YGE YFKFPTGR  DG +IP FIA                        FASA +GVL  T
Sbjct: 66  YGEAYFKFPTGRFCDGRIIPDFIAIKANLPLWTPYLAPGKHQFTNGANFASAASGVLSET 125

Query: 96  NPGTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGG--------------- 140
           NPGT++L +Q+ +FK V S LRQ+L   + +KLL  AVYL S GG               
Sbjct: 126 NPGTISLGMQVNYFKNVTSQLRQELGQEKAKKLLMEAVYLYSTGGNDYQCFYENKTRYLA 185

Query: 141 ---QELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTG 197
              ++    VIGN+T++++EIY +GGRKFAFQN+ PMGCLP  K  Y L  NECL  ++G
Sbjct: 186 PDPEKYAQLVIGNLTNMIREIYEMGGRKFAFQNIGPMGCLPLFKGHYGLPMNECLEELSG 245

Query: 198 LSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYR 257
           L+ L NN   KA KELE +L  FK+ +F FY +LL    +P KYGF  AD+ACCG G Y 
Sbjct: 246 LATLHNNAFLKAIKELESKLRGFKYSVFDFYNSLLNVTKDPSKYGFLFADVACCGYGKYN 305

Query: 258 GPNCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVTVPLSLKQLFEI 315
           G NCGI  + LC N +EY++FDG HPTE     FA+L W  GE  +T P +LK+LF++
Sbjct: 306 GENCGIAPYNLCRNASEYVYFDGAHPTERANPHFAELFWS-GEPPITAPHNLKKLFKL 362

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225442011|ref|XP_002267195.1| PREDICTED: GDSL esterase/lipase 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742946|emb|CBI35813.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255586572|ref|XP_002533921.1| zinc finger protein, putative [Ricinus communis] gi|223526116|gb|EEF28463.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255586576|ref|XP_002533923.1| zinc finger protein, putative [Ricinus communis] gi|223526118|gb|EEF28465.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255586570|ref|XP_002533920.1| zinc finger protein, putative [Ricinus communis] gi|223526115|gb|EEF28462.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225442009|ref|XP_002271802.1| PREDICTED: GDSL esterase/lipase 1 [Vitis vinifera] gi|297742945|emb|CBI35812.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255585076|ref|XP_002533245.1| zinc finger protein, putative [Ricinus communis] gi|223526943|gb|EEF29146.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225442015|ref|XP_002268194.1| PREDICTED: GDSL esterase/lipase 1 [Vitis vinifera] gi|297742947|emb|CBI35814.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442013|ref|XP_002268150.1| PREDICTED: GDSL esterase/lipase 1-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
TAIR|locus:2163021374 GLIP1 "AT5G40990" [Arabidopsis 0.528 0.491 0.434 6.1e-54
TAIR|locus:2090785377 GLIP4 "AT3G14225" [Arabidopsis 0.528 0.488 0.413 1.1e-52
TAIR|locus:2197014385 GLIP5 "AT1G53920" [Arabidopsis 0.494 0.446 0.4 1.8e-50
TAIR|locus:2014450367 GLIP3 "AT1G53990" [Arabidopsis 0.534 0.506 0.424 6.8e-49
TAIR|locus:2014385417 MVP1 "AT1G54030" [Arabidopsis 0.666 0.556 0.323 9.5e-42
TAIR|locus:2026286362 GLIP6 "AT1G71120" [Arabidopsis 0.643 0.618 0.291 1.7e-38
TAIR|locus:2087502392 ESM1 "AT3G14210" [Arabidopsis 0.488 0.433 0.340 7.3e-38
TAIR|locus:2014365372 AT1G54020 "AT1G54020" [Arabido 0.563 0.526 0.285 1.5e-35
TAIR|locus:2014370391 GLL22 "AT1G54000" [Arabidopsis 0.491 0.437 0.305 1.2e-33
TAIR|locus:2090780363 AT3G14220 "AT3G14220" [Arabido 0.646 0.619 0.310 1e-32
TAIR|locus:2163021 GLIP1 "AT5G40990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 396 (144.5 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
 Identities = 83/191 (43%), Positives = 111/191 (58%)

Query:   131 NAVYLSSIGGQELVNWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENE 190
             N+    SI  ++ V++V+GN+TDV KE+YN+GGRKF   N  P  C P +      K   
Sbjct:   184 NSSLFQSISNEKYVDYVVGNMTDVFKEVYNLGGRKFGILNTGPYDCAPASLVIDQTKIRS 243

Query:   191 CLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTTLLERIINPLKYGFKEADIAC 250
             C   VT L  + N  L    + L  +LS FK+ +  ++T+L ER+ +P KYGFKE   AC
Sbjct:   244 CFQPVTELINMHNEKLLNGLRRLNHELSGFKYALHDYHTSLSERMNDPSKYGFKEGKKAC 303

Query:   251 CGSGIYRGPN-CG--IG---EFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWDGGEMNVT 304
             CGSG  RG N CG  +G    +ELC N  +YLFFD  H TE    Q A+L+W G   N+T
Sbjct:   304 CGSGPLRGINTCGGRMGLSQSYELCENVTDYLFFDPFHLTEKANRQIAELIWSG-PTNIT 362

Query:   305 VPLSLKQLFEI 315
              P +LK LFE+
Sbjct:   363 GPYNLKALFEL 373
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016298 "lipase activity" evidence=IEA;ISS;IDA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0005615 "extracellular space" evidence=IDA
GO:0009620 "response to fungus" evidence=IMP
GO:0009627 "systemic acquired resistance" evidence=IMP
GO:0009751 "response to salicylic acid stimulus" evidence=IEP
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IMP
GO:0009866 "induced systemic resistance, ethylene mediated signaling pathway" evidence=IMP
GO:0009871 "jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
TAIR|locus:2090785 GLIP4 "AT3G14225" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197014 GLIP5 "AT1G53920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014450 GLIP3 "AT1G53990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014385 MVP1 "AT1G54030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026286 GLIP6 "AT1G71120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087502 ESM1 "AT3G14210" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014365 AT1G54020 "AT1G54020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014370 GLL22 "AT1G54000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090780 AT3G14220 "AT3G14220" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00034016001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (364 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 6e-90
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 5e-38
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 7e-26
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 2e-06
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 7e-06
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 5e-05
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  271 bits (696), Expect = 6e-90
 Identities = 107/313 (34%), Positives = 150/313 (47%), Gaps = 45/313 (14%)

Query: 31  ALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFKFPTGRCSDGHLIPYFIAK------- 83
           ALF FGDSL D GNNN+L      N+PPYG  +   PTGR S+G LI  FIA+       
Sbjct: 2   ALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLL 61

Query: 84  ------------------FASAGAGVLPATN--PGTLNLEIQLIFFKEVASLLRQQLADA 123
                             FAS GAG+L +T      ++L +QL +FKE    LR  + + 
Sbjct: 62  PPPYLSPNGSSDFLTGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEE 121

Query: 124 EVEKLLRNAVYLSSIGG-----------------QELVNWVIGNITDVVKEIYNIGGRKF 166
               +L  +++L SIG                  +  V +++ NI+  +K +Y++G RKF
Sbjct: 122 AAADILSKSLFLISIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIKRLYDLGARKF 181

Query: 167 AFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFG 226
               + P+GCLP  +  +      CL  +  L+ L N  L K   EL  +L   KF+   
Sbjct: 182 VVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYAD 241

Query: 227 FYTTLLERIINPLKYGFKEADIACCGSGIYRGPN-CGIGEFELCSNPNEYLFFDGHHPTE 285
            Y  LL+ I NP KYGF+    ACCG+G   G   C      +C +P++Y+F+DG HPTE
Sbjct: 242 IYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGVHPTE 301

Query: 286 HGYSQFAKLLWDG 298
                 A  L  G
Sbjct: 302 AANRIIADALLSG 314

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 348
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.92
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 98.81
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 98.71
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 98.68
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 98.66
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 98.66
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 98.65
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 98.62
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 98.59
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 98.59
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 98.58
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 98.5
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 98.45
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 98.44
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 98.44
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 98.39
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 98.37
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 98.36
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 98.21
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 98.08
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 98.08
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 98.0
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 97.94
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 97.83
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 97.8
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 97.7
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 97.66
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 97.59
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 97.24
KOG3670397 consensus Phospholipase [Lipid transport and metab 97.21
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 96.34
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 96.23
COG2755216 TesA Lysophospholipase L1 and related esterases [A 93.34
COG2845354 Uncharacterized protein conserved in bacteria [Fun 83.76
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-69  Score=525.00  Aligned_cols=272  Identities=32%  Similarity=0.611  Sum_probs=237.2

Q ss_pred             eceeeEEEecccccCCCCceeeEeeeecccCCCccceec-cCCccCCCCccchHHHHh----------------------
Q 039843           27 EKHVALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFK-FPTGRCSDGHLIPYFIAK----------------------   83 (348)
Q Consensus        27 ~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~-~p~GRfSnG~v~~d~la~----------------------   83 (348)
                      .++++|||||||++|+||++++.+..++++||||++|++ +|+||||||++|+||||+                      
T Consensus        25 ~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~  104 (351)
T PLN03156         25 AKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDFA  104 (351)
T ss_pred             CCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhhc
Confidence            679999999999999999887765556789999999975 799999999999999998                      


Q ss_pred             ----hhccCCccccCCCC--CceeeEEEeeeHHHHHHHHHHHhhhHHHHHHHhhceeecccCceeeee------------
Q 039843           84 ----FASAGAGVLPATNP--GTLNLEIQLIFFKEVASLLRQQLADAEVEKLLRNAVYLSSIGGQELVN------------  145 (348)
Q Consensus        84 ----fA~gGAt~~~~~~~--~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~Nd~v~------------  145 (348)
                          ||+|||++++.+..  +..+|..||++|.++++++....|...+++..+++||+||||+|||..            
T Consensus       105 ~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~  184 (351)
T PLN03156        105 TGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQY  184 (351)
T ss_pred             ccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccccccccC
Confidence                88999998776431  256789999999999888877667666667889999999999998852            


Q ss_pred             -------eeechhhHHHHHHHhcCCeeeeeccccccccccccccccccccccccccccceeeeecCchhhhHHHhhcccc
Q 039843          146 -------WVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLS  218 (348)
Q Consensus       146 -------~vv~~i~~~i~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~  218 (348)
                             .+++.+.+.|++||++|||||+|+|+||+||+|..+.....+..+|.+.+|++++.||++|++++++|++++|
T Consensus       185 ~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~p  264 (351)
T PLN03156        185 TVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELP  264 (351)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence                   1345567889999999999999999999999998764322134689999999999999999999999999999


Q ss_pred             cceeeehhHHHHHHHHHhcccccCccccceeeecCccccCC-CCcccceeeccCCCceeeecCCCCCcchhHHHHHHhhc
Q 039843          219 DFKFLIFGFYTTLLERIINPLKYGFKEADIACCGSGIYRGP-NCGIGEFELCSNPNEYLFFDGHHPTEHGYSQFAKLLWD  297 (348)
Q Consensus       219 ~~~i~~~D~~~~~~~vi~nP~~yGF~~~~~aCc~~g~~n~~-~C~~~~~~~C~~p~~YlfwD~iHPT~a~h~~iA~~~~~  297 (348)
                      +++|+++|+|+++.++++||++|||++++++||+.|.++.. .|+.....+|++|++|+|||++||||++|+++|+.++ 
T Consensus       265 g~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~-  343 (351)
T PLN03156        265 GIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVV-  343 (351)
T ss_pred             CCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHH-
Confidence            99999999999999999999999999999999998887766 8973322489999999999999999999999999998 


Q ss_pred             CC
Q 039843          298 GG  299 (348)
Q Consensus       298 ~g  299 (348)
                      ++
T Consensus       344 ~~  345 (351)
T PLN03156        344 KT  345 (351)
T ss_pred             HH
Confidence            53

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 5e-42
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  153 bits (388), Expect = 5e-42
 Identities = 53/309 (17%), Positives = 78/309 (25%), Gaps = 53/309 (17%)

Query: 31  ALFGFGDSLYDPGNNNFLNISIGCNYPPYGETYFK-FPTGRCSDGHLIPYFIAK------ 83
            L  FGDSL D G         G                     G   P  +        
Sbjct: 17  TLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAP 76

Query: 84  ---------------------FASAGAGVLPATNPGT--LNLEIQLIFFKEVASLLRQQL 120
                                +A  G       +  T      I+       +       
Sbjct: 77  GDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVD 136

Query: 121 ADAEVEKLLRNAVYLSSIGGQELVNW----------VIGNITDVVKEIYNIGGRKFAFQN 170
              +      NA+Y  + GG + +              G + D V+ +   G R      
Sbjct: 137 RARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQALQQAGARYIVVWL 196

Query: 171 VAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEMQLSDFKFLIFGFYTT 230
           +  +G  P T            P  + LS   N  L        +  +    +       
Sbjct: 197 LPDLGLTPATFG------GPLQPFASQLSGTFNAELTAQ-----LSQAGANVIPLNIPLL 245

Query: 231 LLERIINPLKYGFKEAD--IACCGSGIYRGPNCGIGEFELCSNPNEYLFFDGHHPTEHGY 288
           L E + NP  +G       I  C SG     N   G      +P++ LF D  HPT  G 
Sbjct: 246 LKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQ 305

Query: 289 SQFAKLLWD 297
              A   + 
Sbjct: 306 RLIADYTYS 314

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.41
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.12
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 98.96
1vjg_A218 Putative lipase from the G-D-S-L family; structura 98.92
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 98.79
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 98.77
2hsj_A214 Putative platelet activating factor; structr genom 98.67
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 98.66
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 98.61
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 98.55
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 98.47
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 98.47
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 98.4
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 98.36
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 98.32
3bzw_A274 Putative lipase; protein structure initiative II, 98.27
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 98.23
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 98.22
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 98.09
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 98.05
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 98.0
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 97.75
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 97.3
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 94.19
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=1.8e-54  Score=450.00  Aligned_cols=265  Identities=22%  Similarity=0.283  Sum_probs=212.1

Q ss_pred             ceeeceeeEEEecccccCCCCceeeEeeee--ccc-CCCccceeccCCccCC-CCccchHHHHh----------------
Q 039843           24 IKLEKHVALFGFGDSLYDPGNNNFLNISIG--CNY-PPYGETYFKFPTGRCS-DGHLIPYFIAK----------------   83 (348)
Q Consensus        24 ~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~--~~~-~Pyg~~~~~~p~GRfS-nG~v~~d~la~----------------   83 (348)
                      ..+.++++||+||||+|||||.........  ..+ .|.|.+|+   +|||| ||++|+||||+                
T Consensus        10 ~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~~---~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~   86 (632)
T 3kvn_X           10 EAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQ---NGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPV   86 (632)
T ss_dssp             SCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSCC---TTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHH
T ss_pred             cCCCCCccEEEEccccccCCCcccccCCcCCccccccCCCCccc---cCcccccCCchHHHHHHHcCCCccccCcccccc
Confidence            446789999999999999999743211100  011 12266664   79999 99999999987                


Q ss_pred             -----------hhccCCcc---ccCCC--C-CceeeEEEeeeHH-HHHHHHHHHhhhHHHHHHHhhceeecccCceeee-
Q 039843           84 -----------FASAGAGV---LPATN--P-GTLNLEIQLIFFK-EVASLLRQQLADAEVEKLLRNAVYLSSIGGQELV-  144 (348)
Q Consensus        84 -----------fA~gGAt~---~~~~~--~-~~~~l~~Qv~~f~-~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~Nd~v-  144 (348)
                                 ||+||||+   ++.+.  . .+++|..||.+|+ .+++++..     .+.+..+++||+||||+|||+ 
T Consensus        87 ~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~-----~~~~~~~~sL~~v~iG~ND~~~  161 (632)
T 3kvn_X           87 NAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRAR-----QGLGADPNALYYITGGGNDFLQ  161 (632)
T ss_dssp             HHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHT-----TTCCCCTTSEEEECCSHHHHHT
T ss_pred             ccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhh-----ccCccCCCCEEEEEEechhhhc
Confidence                       99999997   33321  1 2566777777765 44443321     112457899999999999863 


Q ss_pred             ---------eeeechhhHHHHHHHhcCCeeeeeccccccccccccccccccccccccccccceeeeecCchhhhHHHhhc
Q 039843          145 ---------NWVIGNITDVVKEIYNIGGRKFAFQNVAPMGCLPFTKQEYNLKENECLPAVTGLSILRNNGLFKAAKELEM  215 (348)
Q Consensus       145 ---------~~vv~~i~~~i~~L~~~GAr~~vV~nlpplgc~P~~~~~~~~d~~~c~~~~n~~~~~fN~~L~~~l~~L~~  215 (348)
                               +.+++++.++|++||++|||+|+|+++||+||+|...      ..+|.+.+|+++..||++|+++|++|+.
T Consensus       162 ~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~------~~~c~~~~n~~~~~~N~~L~~~l~~l~~  235 (632)
T 3kvn_X          162 GRILNDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF------GGPLQPFASQLSGTFNAELTAQLSQAGA  235 (632)
T ss_dssp             TCCCSHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT------TSTTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc------CCCchHHHHHHHHHHHHHHHHHHHhCCC
Confidence                     5789999999999999999999999999999999952      2489999999999999999999999963


Q ss_pred             ccccceeeehhHHHHHHHHHhcccccCccccc--eeeecCccccCCCCcccc----eeeccCCCceeeecCCCCCcchhH
Q 039843          216 QLSDFKFLIFGFYTTLLERIINPLKYGFKEAD--IACCGSGIYRGPNCGIGE----FELCSNPNEYLFFDGHHPTEHGYS  289 (348)
Q Consensus       216 ~~~~~~i~~~D~~~~~~~vi~nP~~yGF~~~~--~aCc~~g~~n~~~C~~~~----~~~C~~p~~YlfwD~iHPT~a~h~  289 (348)
                           +|+++|+|+++.++++||++|||+++.  ++||+.|.    .|+...    ..+|+||++|+|||++||||++|+
T Consensus       236 -----~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~----~C~~~~~~~~~~~C~~~~~y~fwD~~HpTe~~~~  306 (632)
T 3kvn_X          236 -----NVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN----GCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQR  306 (632)
T ss_dssp             -----CEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT----TSCBCTTTSTTSSSCCGGGCSBSSSSCBCHHHHH
T ss_pred             -----eEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC----ccCCcccccccccCCCccceEEecCCCCHHHHHH
Confidence                 799999999999999999999999874  69998763    676321    358999999999999999999999


Q ss_pred             HHHHHhhcCCeeeEEeeccccceeee
Q 039843          290 QFAKLLWDGGEMNVTVPLSLKQLFEI  315 (348)
Q Consensus       290 ~iA~~~~~~g~~~~~~P~~~~~l~~~  315 (348)
                      +||+.++ ++   +..|+++++|.++
T Consensus       307 ~ia~~~~-~~---~~~P~~~~~l~~~  328 (632)
T 3kvn_X          307 LIADYTY-SL---LSAPWELTLLPEM  328 (632)
T ss_dssp             HHHHHHH-HH---HHTHHHHTTHHHH
T ss_pred             HHHHHHH-hc---cCCCccHHHHHHH
Confidence            9999999 65   3568999988765
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.35
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 98.89
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 98.65
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.65
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 98.49
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 98.46
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 98.24
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 97.99
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 97.62
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 97.56
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 95.78
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.35  E-value=1.4e-13  Score=126.04  Aligned_cols=27  Identities=19%  Similarity=-0.043  Sum_probs=24.9

Q ss_pred             cCCCceeeecCCCCCcchhHHHHHHhh
Q 039843          270 SNPNEYLFFDGHHPTEHGYSQFAKLLW  296 (348)
Q Consensus       270 ~~p~~YlfwD~iHPT~a~h~~iA~~~~  296 (348)
                      .++..+++||.+|||+++|++||+.+.
T Consensus       268 ~~~~~~~~~d~~HPn~~G~~~iA~~i~  294 (302)
T d1esca_         268 LELLGTKIPWYAHPNDKGRDIQAKQVA  294 (302)
T ss_dssp             EESSSCEEECSSCBCHHHHHHHHHHHH
T ss_pred             cccccccccCCcCCCHHHHHHHHHHHH
Confidence            357889999999999999999999987
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure