Citrus Sinensis ID: 039869

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEcccccEEEEcccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHccEEEEcccccEEEEccccEEEEEcccHcccccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccHccHHHHHHHHHHHcccHcccccHHHHHccccccccc
Coil and Loop (DISEMBL)
sakglpeheigRYTKDILRGLdhihshglvhcdiqgdntllvagkdAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWgsfgrglasRDDLLELIAFssevpefpsnisedGRDFLSKCFIRVHQLRWTakhvlahpfpsvde
Flexible Loop (DISEMBL)
sakglpeheiGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKhvlahpfpsvde
Low Complexity Region (SEG)
SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE
Disordered region (IsUnstruct)
*********IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH*******
Disordered Region (DISOPRED)
**KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV**
Disordered Region (DISEMBL)
SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE
Disordered Region (DISPRO)
****LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA*PFP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
O22040	666	Mitogen-activated protein	no	no	0.907	0.207	0.281	3e-12
Q9FZ36	651	Mitogen-activated protein	no	no	0.914	0.213	0.297	4e-12
Q54R82	942	Mitogen-activated protein	no	no	0.894	0.144	0.312	7e-12
Q61084	626	Mitogen-activated protein	yes	no	0.901	0.218	0.284	5e-10
P28829	659	Protein kinase byr2 OS=Sc	yes	no	0.881	0.203	0.283	6e-10
Q99759	626	Mitogen-activated protein	yes	no	0.901	0.218	0.284	6e-10
Q9Y6R4	1608	Mitogen-activated protein	no	no	0.927	0.087	0.261	9e-10
O22042	651	Mitogen-activated protein	no	no	0.907	0.211	0.275	2e-09
O08648	1597	Mitogen-activated protein	no	no	0.927	0.088	0.261	3e-09
P27636	974	Cell division control pro	yes	no	0.901	0.140	0.292	4e-09

>sp|O22040|ANP1_ARATH Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2

 Score = 70.9 bits (172), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 29/167 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA---------GKDAHEAEISA- 54
            PE  +  YT+ +L GL+++H+H ++H DI+G N L+           G     AE++  
Sbjct: 169 FPESVVRTYTRQLLLGLEYLHNHAIMHRDIKGANILVDNKGCIKLADFGASKQVAELATM 228

Query: 55  -----------FLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
                      ++    +L   H    D W++G   +EM+T + + W    + +A+    
Sbjct: 229 TGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGK-APWSQQYKEVAA---- 283

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +  I  +   P  P  +S D +DFL KC   V  LR TA  +L HPF
Sbjct: 284 IFFIGTTKSHPPIPDTLSSDAKDFLLKCLQEVPNLRPTASELLKHPF 330

May be involved in an oxidative stress-mediated signaling cascade that phosphorylates downstream MAP kinases MPK3 and MPK6. May suppress auxin signaling that promotes cell cycle. Functionally redundant to ANP2 and ANP3 in the positive regulation of cytokinesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 5

>sp|Q9FZ36|M3K2_ARATH Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 29/168 (17%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
             PE  +  YT  +L GL+++H+H ++H DI+G N L+             + + A  A 
Sbjct: 167 AFPESVVRTYTNQLLLGLEYLHNHAIMHRDIKGANILVDNQGCIKLADFGASKQVAELAT 226

Query: 52  ISAFLQRHG---------LLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           IS      G         +L   H    D W++G   +EM+T + + W    + +A+   
Sbjct: 227 ISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGK-APWSQQYKEIAA--- 282

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +  I  +   P  P NIS D  DFL KC  +   LR TA  +L HPF
Sbjct: 283 -IFHIGTTKSHPPIPDNISSDANDFLLKCLQQEPNLRPTASELLKHPF 329

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum GN=mkkA PE=1 SV=2

 Score = 69.7 bits (169), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 27/163 (16%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL----------VAGKDAHEAEISAFL 56
           E+ I  YTK IL+GL  +H++ ++H DI+G N L+               +    +S F 
Sbjct: 271 ENVIKVYTKQILQGLSFLHANSIIHRDIKGANILIDTKGIVKLSDFGCSKSFSGIVSQFK 330

Query: 57  QRHGL------LLIYHV------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
              G        +I         D W+LG V VEM TA+   W +     A    ++  I
Sbjct: 331 SMQGTPYWMAPEVIKQTGHGRSSDIWSLGCVIVEMATAQ-PPWSNITELAA----VMYHI 385

Query: 105 AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           A S+ +P  PS++S++  DFL+ CF R  + R  A  +L HPF
Sbjct: 386 ASSNSIPNIPSHMSQEAFDFLNLCFKRDPKERPDANQLLKHPF 428

Regulates cell-type differentiation and spatial patterning, required for the proper induction and maintenance of prespore cell differentiation.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q61084|M3K3_MOUSE Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 32/169 (18%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL 63
            L E    +YT+ IL G+ ++HS+ +VH DI+G N L  +  +    +  A  +   + +
Sbjct: 460 ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 519

Query: 64  I-------------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
                                        D W+LG   VEM+T E   W  +   +A+  
Sbjct: 520 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAEY-EAMAA-- 575

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +  IA     P+ PS+ISE GRDFL + F+   Q R +A+ +L H F
Sbjct: 576 --IFKIATQPTNPQLPSHISEHGRDFLRRIFVEARQ-RPSAEELLTHHF 621

Component of a protein kinase signal transduction cascade. Mediates activation of the NF-kappa-B, AP1 and DDIT3 transcriptional regulators.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|P28829|BYR2_SCHPO Protein kinase byr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=byr2 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 39/173 (22%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD---------AHEAEISAFLQ 57
           E  +  + K  L+GL+++HS G+VH DI+G N +LV  K          + + E+++   
Sbjct: 496 ETLVKNFIKQTLKGLEYLHSRGIVHRDIKGAN-ILVDNKGKIKISDFGISKKLELNSTST 554

Query: 58  RHG--------------------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           + G                     +     D W+LG + +EM+T++            + 
Sbjct: 555 KTGGARPSFQGSSFWMAPEVVKQTMHTEKTDIWSLGCLVIEMLTSK--------HPYPNC 606

Query: 98  DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
           D +  +      + PEFPSNIS    DFL K F     LR TA  +L+HPF S
Sbjct: 607 DQMQAIFRIGENILPEFPSNISSSAIDFLEKTFAIDCNLRPTASELLSHPFVS 659

Serine/threonine protein kinase involved in conjugation and sporulation. It is thought that it phosphorylates the byr1 protein kinase which itself phosphorylate the spk1 kinase.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q99759|M3K3_HUMAN Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2

 Score = 63.2 bits (152), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 32/169 (18%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL 63
            L E    +YT+ IL G+ ++HS+ +VH DI+G N L  +  +    +  A  +   + +
Sbjct: 460 ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 519

Query: 64  I-------------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
                                        D W+LG   VEM+T E   W  +   +A+  
Sbjct: 520 SGTGMRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAEY-EAMAA-- 575

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +  IA     P+ PS+ISE GRDFL + F+   Q R +A+ +L H F
Sbjct: 576 --IFKIATQPTNPQLPSHISEHGRDFLRRIFVEARQ-RPSAEELLTHHF 621

Component of a protein kinase signal transduction cascade. Mediates activation of the NF-kappa-B, AP1 and DDIT3 transcriptional regulators.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=2

 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 35/176 (19%)

Query: 4    GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------------GKD 46
            GL EH I  Y+K I   ++ +H HG+VH DI+G N  L +                    
Sbjct: 1434 GLQEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFLTSSGLIKLGDFGCSVKLKNNAQ 1493

Query: 47   AHEAEISAFLQRHGLLLIYHV------------DTWALGRVFVEMMTAEISAWGSFGRGL 94
                E+++ L     +    +            D W+LG V +EM+T +   W  +    
Sbjct: 1494 TMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGK-RPWHEYEHNF 1552

Query: 95   ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
                 ++  +    + P  P  +S +G+DFLS C     ++RWTA  +L H F  V
Sbjct: 1553 ----QIMYKVGMGHK-PPIPERLSPEGKDFLSHCLESDPKMRWTASQLLDHSFVKV 1603

Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 29/167 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEI 52
            PE  I  YTK +L GL+++H++G++H DI+G N L+             + K    A +
Sbjct: 168 FPEPVIIMYTKQLLLGLEYLHNNGIMHRDIKGANILVDNKGCIRLADFGASKKVVELATV 227

Query: 53  SAFLQRHG---------LLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
           +      G         +L   H    D W++G   +EM T +   W    +  A+    
Sbjct: 228 NGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK-PPWSEQYQQFAA---- 282

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +  I  +   P  P ++S + +DFL KC  +   LR +A  +L HPF
Sbjct: 283 VLHIGRTKAHPPIPEDLSPEAKDFLMKCLHKEPSLRLSATELLQHPF 329

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O08648|M3K4_MOUSE Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus GN=Map3k4 PE=1 SV=2

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 35/176 (19%)

Query: 4    GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------------GKD 46
            GL EH I  YTK I   ++ +H HG+VH DI+G N  L +                    
Sbjct: 1423 GLQEHVIRLYTKQITVAINVLHEHGIVHRDIKGANIFLTSSGLIKLGDFGCSVKLKNNAQ 1482

Query: 47   AHEAEISAFLQRHGLLLIYHV------------DTWALGRVFVEMMTAEISAWGSFGRGL 94
                E+++ L     +    +            D W+LG V +EM+T +   W  +    
Sbjct: 1483 TMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGK-RPWHEYEHNF 1541

Query: 95   ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
                 ++  +    + P  P  +S +G+ FLS C     ++RWTA  +L H F  V
Sbjct: 1542 ----QIMYKVGMGHK-PPIPERLSPEGKAFLSHCLESDPKIRWTASQLLDHAFVKV 1592

Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|P27636|CDC15_YEAST Cell division control protein 15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC15 PE=1 SV=3

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 27/164 (16%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQR 58
           S+ GL E+E   Y    L GL ++H  G++H DI+  N LL A      A+  +S  +  
Sbjct: 114 SSTGLSENESKTYVTQTLLGLKYLHGEGVIHRDIKAANILLSADNTVKLADFGVSTIVNS 173

Query: 59  HGLLLIYHV-----------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
             L L   +                 D W+LG   VEM+T              +  D  
Sbjct: 174 SALTLAGTLNWMAPEILGNRGASTLSDIWSLGATVVEMLTKNPP--------YHNLTDAN 225

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
              A  ++    PS+ SE  +DFLSKCF++    R TA  +L H
Sbjct: 226 IYYAVENDTYYPPSSFSEPLKDFLSKCFVKNMYKRPTADQLLKH 269

Essential for late nuclear division in the mitotic cycle. Required for inactivation of CDC2 kinase activity at the end of mitosis.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
359480078	360	PREDICTED: mitogen-activated protein kin	0.967	0.408	0.402	9e-23
225437961	350	PREDICTED: mitogen-activated protein kin	0.953	0.414	0.401	6e-22
147834028	456	hypothetical protein VITISV_023637 [Viti	0.967	0.322	0.396	8e-22
4006878	799	MAP3K-like protein kinase [Arabidopsis t	0.993	0.188	0.343	3e-21
145334247	336	mitogen-activated protein kinase kinase	0.993	0.449	0.343	1e-20
225437914	345	PREDICTED: mitogen-activated protein kin	0.973	0.428	0.369	3e-20
224091835	271	predicted protein [Populus trichocarpa]	0.907	0.509	0.318	4e-20
255578108	449	Mitogen-activated protein kinase kinase	0.907	0.307	0.395	5e-20
15240194	344	mitogen-activated protein kinase kinase	0.967	0.427	0.386	7e-20
147841887	420	hypothetical protein VITISV_024689 [Viti	0.907	0.328	0.384	8e-20

>gi|359480078|ref|XP_003632394.1| PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Vitis vinifera]

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 93/179 (51%), Gaps = 32/179 (17%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV-AGKDAHEAEISAF-LQRHGL 61
           GLPE+E+  YT+DI+RGL +IH HG VHCDI+ DN LL     +   A+I  F L +   
Sbjct: 157 GLPENEVRCYTRDIVRGLCYIHGHGYVHCDIKPDNILLAPTCCNGFRAKIGDFGLAKEAY 216

Query: 62  ------------------------LLIYHV-----DTWALGRVFVEMMTAEISAWGSFGR 92
                                   LL +++     D WALG V +EMMT ++  W     
Sbjct: 217 YDPADEDDEGCSGVRGTFRYMSPELLTHNMQCWLSDIWALGCVVIEMMTGKL-VWSCEQF 275

Query: 93  GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
            ++   DLL  IA+S E+P FPSNISE GR FL  C  R    RW+A  +L HPF S D
Sbjct: 276 EVSDMRDLLRRIAYSPELPAFPSNISEQGRHFLESCLHRDIDERWSALMLLRHPFLSED 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437961|ref|XP_002269638.1| PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Vitis vinifera]

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 93/177 (52%), Gaps = 32/177 (18%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV-AGKDAHEAEISAF-LQRHGL 61
           GLPE+E+  YT+DI+RGL +IH HG VHCDI+ DN LLV    +   A+I  F L +   
Sbjct: 162 GLPENEVRCYTRDIVRGLCYIHGHGYVHCDIKPDNILLVPTCCNGFRAKIGDFGLAKEAY 221

Query: 62  ------------------------LLIYHV-----DTWALGRVFVEMMTAEISAWGSFGR 92
                                   LL +++     D WALG V +EM+T ++  WG    
Sbjct: 222 YDPADEDDEGCSGVRGTFRYMSPELLTHNMQCWLSDIWALGCVVIEMITGKL-VWGCEQF 280

Query: 93  GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
             +   DLL  IA+S E+P FPS+ISE GR FL  C  R    RW+A  +L HPF S
Sbjct: 281 EGSDMRDLLRRIAYSPELPAFPSDISEQGRHFLESCLHRDIDERWSALMLLRHPFLS 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147834028|emb|CAN71000.1| hypothetical protein VITISV_023637 [Vitis vinifera]

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 93/179 (51%), Gaps = 32/179 (17%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV-AGKDAHEAEISAF-LQRHGL 61
           GLPE+E+  YT+DI+RGL +IH HG VHCDI+ DN LLV    +   A+I  F L +   
Sbjct: 268 GLPENEVRCYTRDIVRGLCYIHGHGYVHCDIKPDNILLVPTCCNGFRAKIGDFGLAKEAY 327

Query: 62  ------------------------LLIYHV-----DTWALGRVFVEMMTAEISAWGSFGR 92
                                   LL +++     D WALG V +EM+T ++  W     
Sbjct: 328 YDPADEDDEGCSGVRGTFRYMSPELLTHNMQCWLSDIWALGCVVIEMITGKL-VWSCEQF 386

Query: 93  GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
             +   DLL  IA+S E+P FPS+ISE GR FL  C  R    RW+A  +L HPF S D
Sbjct: 387 EGSDMRDLLRRIAYSPELPAFPSDISEQGRHFLESCLHRDIDERWSALMLLRHPFLSED 445

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4006878|emb|CAB16796.1| MAP3K-like protein kinase [Arabidopsis thaliana] gi|7270644|emb|CAB80361.1| MAP3K-like protein kinase [Arabidopsis thaliana]

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 21/172 (12%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
           S + LPE E+ R+T+ I++GL HIH +G  HCDI+ +N L+    D   ++     +R G
Sbjct: 99  SGEALPEFEVRRFTRSIVKGLCHIHGNGFTHCDIKLENVLVFGDGDVKISDFGLAKRRSG 158

Query: 61  LLLI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            + +                       D WALG   VEM + + +AW      + +   L
Sbjct: 159 EVCVEIRGTPLYMAPESVNHGEFESPADIWALGCSVVEMSSGK-TAWCLEDGVMNNVMSL 217

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE 152
           L  I    EVP  P  +SE+G+DF+SKCF++    RWTA+ +L HPF +VD+
Sbjct: 218 LVRIGSGDEVPRIPVELSEEGKDFVSKCFVKNAAERWTAEMLLDHPFLAVDD 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334247|ref|NP_001078504.1| mitogen-activated protein kinase kinase kinase 21 [Arabidopsis thaliana] gi|17979279|gb|AAL49865.1| unknown protein [Arabidopsis thaliana] gi|20465439|gb|AAM20179.1| unknown protein [Arabidopsis thaliana] gi|332661323|gb|AEE86723.1| mitogen-activated protein kinase kinase kinase 21 [Arabidopsis thaliana]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 21/172 (12%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
           S + LPE E+ R+T+ I++GL HIH +G  HCDI+ +N L+    D   ++     +R G
Sbjct: 99  SGEALPEFEVRRFTRSIVKGLCHIHGNGFTHCDIKLENVLVFGDGDVKISDFGLAKRRSG 158

Query: 61  LLLI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            + +                       D WALG   VEM + + +AW      + +   L
Sbjct: 159 EVCVEIRGTPLYMAPESVNHGEFESPADIWALGCSVVEMSSGK-TAWCLEDGVMNNVMSL 217

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE 152
           L  I    EVP  P  +SE+G+DF+SKCF++    RWTA+ +L HPF +VD+
Sbjct: 218 LVRIGSGDEVPRIPVELSEEGKDFVSKCFVKNAAERWTAEMLLDHPFLAVDD 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437914|ref|XP_002267830.1| PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Vitis vinifera]

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 92/192 (47%), Gaps = 44/192 (22%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV----------------AGKDA 47
           GLPE E+  YT+DI+RGL ++H HG  HCDI+ +N LLV                A K+ 
Sbjct: 152 GLPEKEMRSYTRDIVRGLCYVHGHGYTHCDIKPENILLVPTSCNGLRAKIGDFGLAKKEY 211

Query: 48  --HEAEISAFLQRHGLLLIYHV---------------DTWALGRVFVEMMTAEISAWGSF 90
             HE E        GL   Y                 D WALG V +EMM+ ++  W   
Sbjct: 212 FDHEEENEDDKGCGGLRGTYRYMSPELVADNMQCWLSDIWALGCVIIEMMSGKL-VWSCE 270

Query: 91  GRGLASRD----------DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK 140
                 RD          D+L  IA+S+E+PEFPS ISE G+ FL +C  R    RW+A 
Sbjct: 271 QIDSDMRDGKQQFDSDMRDVLMRIAYSTELPEFPSTISEQGKHFLERCLDRDIDERWSAL 330

Query: 141 HVLAHPFPSVDE 152
            +L HPF S D+
Sbjct: 331 MLLRHPFLSQDD 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091835|ref|XP_002309365.1| predicted protein [Populus trichocarpa] gi|222855341|gb|EEE92888.1| predicted protein [Populus trichocarpa]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 41/179 (22%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
           S  GLPE ++ +YT+D+++GL ++H  G +HCD++  N LLV G +       A +   G
Sbjct: 101 SGSGLPESDVRKYTRDVVKGLKYVHCRGYIHCDVKPGNILLVPGTEERSGGFVAKIADFG 160

Query: 61  LLLI-----------------------------YHVDTWALGRVFVEMMTAEISAWGSFG 91
           L +                              Y VD WALG   VEM++         G
Sbjct: 161 LAMSIYENQNWGDDLIGTYPYMSPELVKEKRYDYGVDIWALGCTVVEMLS---------G 211

Query: 92  RGLASRDDL---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           + +  R D+   L  I  S ++P+ PS+IS++ +DFL KC +R    RW+A  +L HPF
Sbjct: 212 KPVWPRMDVPGYLYTIGDSQDLPQIPSSISDEAKDFLGKCLVRNAAQRWSADELLEHPF 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578108|ref|XP_002529924.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis] gi|223530601|gb|EEF32478.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 87/172 (50%), Gaps = 34/172 (19%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLV--------------------- 42
           L E  IG YT++IL+GLD++H + GLVHCDI+  N L+                      
Sbjct: 97  LDEPMIGSYTRNILQGLDYLHRNIGLVHCDIKSKNVLISKDGAKIADFGCAKFVEQVARN 156

Query: 43  AGKDAHE-AEISAFLQRH---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
            G DA   +   AF+      G    +  D WA+G   +EM T  I  W      +   D
Sbjct: 157 GGGDASAFSGTPAFMSPEVARGEEQGFPADIWAVGCTVIEMATGSI-PWAE----IMKND 211

Query: 99  DLLEL---IAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           D L +   I FSSE PEFPS +SE G+DFLSKC  R  + RWTAK +L HPF
Sbjct: 212 DPLSVLYRIGFSSEAPEFPSWLSEKGKDFLSKCLRRDSKERWTAKELLDHPF 263

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240194|ref|NP_201509.1| mitogen-activated protein kinase kinase kinase 19 [Arabidopsis thaliana] gi|10177595|dbj|BAB10942.1| protein kinase-like protein [Arabidopsis thaliana] gi|332010915|gb|AED98298.1| mitogen-activated protein kinase kinase kinase 19 [Arabidopsis thaliana]

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 92/176 (52%), Gaps = 29/176 (16%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
           + +G+PE  + R+T  +LRGL HIH++G  HCD++  N LL  G  A +       +R G
Sbjct: 101 AGEGVPESTVRRHTGSVLRGLRHIHANGFAHCDLKLGNILLF-GDGAVKIADFGLAKRIG 159

Query: 61  LL--LIYHV-----------------------DTWALGRVFVEMMTAEISAWGSFGRGLA 95
            L  L Y V                       D WALG V VEM + + +AW S   G +
Sbjct: 160 DLTALNYGVQIRGTPLYMAPESVNDNEYGSEGDVWALGCVVVEMFSGK-TAW-SLKEG-S 216

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
           +   LL  I    EVP  P  +SE GRDFLSKCF++  + RWTA+ +L HPF +VD
Sbjct: 217 NFMSLLLRIGVGDEVPMIPEELSEQGRDFLSKCFVKDPKKRWTAEMLLNHPFVTVD 272

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841887|emb|CAN65217.1| hypothetical protein VITISV_024689 [Vitis vinifera]

 Score =  101 bits (252), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 26/164 (15%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGKDAHE 49
           L E  IG Y + I++GLD+IHS GLVHCDI+G N L+                 GKD  +
Sbjct: 97  LHESMIGIYARQIVQGLDYIHSRGLVHCDIKGQNVLIGEDGAKIADFGCAKWTNGKDDRK 156

Query: 50  AEISA---FLQ---RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
            +I+    F+      G    Y  D WALG   +EM T   + W +    +A+    L  
Sbjct: 157 VQIAGTPFFMAPEVARGEDQGYPSDVWALGCTIIEMATGG-APWPNVANAVAA----LYR 211

Query: 104 IAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           I FS E+P  PS +S+  +DFLSKC  R  + RWTA  +L HPF
Sbjct: 212 IGFSEELPWIPSFLSDQAKDFLSKCLRRDPKERWTASQLLKHPF 255

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
TAIR|locus:2155568	344	MAPKKK19 "mitogen-activated pr	0.532	0.235	0.488	6.9e-24
TAIR|locus:2114990	336	MAPKKK21 "mitogen-activated pr	0.552	0.25	0.423	3.2e-23
TAIR|locus:2074835	342	MAPKKK20 "mitogen-activated pr	0.532	0.236	0.428	1.4e-21
TAIR|locus:2060246	372	MAPKKK17 "mitogen-activated pr	0.493	0.201	0.397	1.5e-20
TAIR|locus:2116417	444	MAPKKK16 "mitogen-activated pr	0.940	0.322	0.357	1.2e-17
TAIR|locus:2075246	376	AT3G46140 [Arabidopsis thalian	0.598	0.242	0.402	3.4e-17
TAIR|locus:2177018	369	AT5G12090 [Arabidopsis thalian	0.335	0.138	0.450	7.3e-17
TAIR|locus:2075281	393	AT3G46160 [Arabidopsis thalian	0.585	0.226	0.354	2.3e-16
TAIR|locus:2146340	301	AT5G27510 [Arabidopsis thalian	0.453	0.229	0.426	7.3e-16
TAIR|locus:2161690	448	MAPKKK15 "mitogen-activated pr	0.927	0.314	0.341	1.9e-15

TAIR|locus:2155568 MAPKKK19 "mitogen-activated protein kinase kinase kinase 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
 Identities = 41/84 (48%), Positives = 53/84 (63%)

Query:    68 DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSK 127
             D WALG V VEM + + +AW S   G ++   LL  I    EVP  P  +SE GRDFLSK
Sbjct:   192 DVWALGCVVVEMFSGK-TAW-SLKEG-SNFMSLLLRIGVGDEVPMIPEELSEQGRDFLSK 248

Query:   128 CFIRVHQLRWTAKHVLAHPFPSVD 151
             CF++  + RWTA+ +L HPF +VD
Sbjct:   249 CFVKDPKKRWTAEMLLNHPFVTVD 272

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2114990 MAPKKK21 "mitogen-activated protein kinase kinase kinase 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
 Identities = 36/85 (42%), Positives = 51/85 (60%)

Query:    68 DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSK 127
             D WALG   VEM + + +AW      + +   LL  I    EVP  P  +SE+G+DF+SK
Sbjct:   186 DIWALGCSVVEMSSGK-TAWCLEDGVMNNVMSLLVRIGSGDEVPRIPVELSEEGKDFVSK 244

Query:   128 CFIRVHQLRWTAKHVLAHPFPSVDE 152
             CF++    RWTA+ +L HPF +VD+
Sbjct:   245 CFVKNAAERWTAEMLLDHPFLAVDD 269

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2074835 MAPKKK20 "mitogen-activated protein kinase kinase kinase 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
 Identities = 36/84 (42%), Positives = 51/84 (60%)

Query:    68 DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSK 127
             D WALG   VEM + + +AW S   G +    LL  I    E+P+ P  +SE+G+DFLSK
Sbjct:   191 DVWALGCAVVEMFSGK-TAW-SVKEG-SHFMSLLIRIGVGDELPKIPEMLSEEGKDFLSK 247

Query:   128 CFIRVHQLRWTAKHVLAHPFPSVD 151
             CF++    RWTA+ +L H F ++D
Sbjct:   248 CFVKDPAKRWTAEMLLNHSFVTID 271

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IMP

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

GO:0000302 "response to reactive oxygen species" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

TAIR|locus:2060246 MAPKKK17 "mitogen-activated protein kinase kinase kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
 Identities = 33/83 (39%), Positives = 45/83 (54%)

Query:    68 DTWALGRVFVEMMTAEISAWGSFGRGLASRDD---LLELIAFSSEVPEFPSNISEDGRDF 124
             D WA+G   +EM+T     W        SR+D   +L  + +SSE PE P  ++E+ +DF
Sbjct:   181 DIWAVGCTMIEMVTGS-PPWTKAD----SREDPVSVLYRVGYSSETPELPCLLAEEAKDF 235

Query:   125 LSKCFIRVHQLRWTAKHVLAHPF 147
             L KC  R    RWTA  +L HPF
Sbjct:   236 LEKCLKREANERWTATQLLNHPF 258

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2116417 MAPKKK16 "mitogen-activated protein kinase kinase kinase 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 59/165 (35%), Positives = 81/165 (49%)

Query:     5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-------VA----GKDAHEAEIS 53
             LPE EI  YT+ IL GL ++H  G+VHCD++  N L+       +A     K   ++E S
Sbjct:    98 LPEPEIRSYTRQILNGLVYLHERGIVHCDLKSHNVLVEENGVLKIADMGCAKSVDKSEFS 157

Query:    54 ---AFLQ---RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
                AF+      G    +  D WALG   +EMMT   S W      +A+    +  I FS
Sbjct:   158 GTPAFMAPEVARGEEQRFPADVWALGCTMIEMMTGS-SPWPELNDVVAA----MYKIGFS 212

Query:   108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE 152
              E P  P+ IS+  +DFL  C     + RWT + +L HPF   DE
Sbjct:   213 GESPAIPAWISDKAKDFLKNCLKEDQKQRWTVEELLKHPFLDDDE 257

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2075246 AT3G46140 [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
 Identities = 39/97 (40%), Positives = 52/97 (53%)

Query:    52 ISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD-DLLELIAFSSEV 110
             +S  L RHG++  Y VDTWA G   +EM+T +   WG     L S D D+L  I  S  +
Sbjct:   277 MSPELIRHGIV-DYAVDTWAFGCTVLEMLTGQ-QVWGEHS-DLGSVDWDIL--IGQSCYI 331

Query:   111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             P  P  +SE+ + FLS+C  R    RW    +L HPF
Sbjct:   332 PYIPDWLSEEAQHFLSRCLKRDPASRWGIGALLNHPF 368

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2177018 AT5G12090 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
 Identities = 23/51 (45%), Positives = 33/51 (64%)

Query:     5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF 55
             LP+  I  +T+ IL GL  +HSHG VHCD++ DN L+ + KD+   E+  F
Sbjct:   132 LPDPMIRDFTRMILEGLVSMHSHGYVHCDLKSDNLLIFSRKDSASCELKIF 182

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2075281 AT3G46160 [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
 Identities = 33/93 (35%), Positives = 47/93 (50%)

Query:    61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISED 120
             ++L Y  D WA G   +EM+T E   W  FG+     +    LI  S  VP  P+ +S+ 
Sbjct:   248 MVLDYGADVWAFGCTVLEMLTGE-RVWSEFGK--LDWEGWKTLIGESGSVPYIPNYLSDK 304

Query:   121 GRDFLSKCFIRVHQLRWTAKHVLAHPFPS-VDE 152
              +DFL+KC  R    RW+   +L H F   +DE
Sbjct:   305 AKDFLAKCLERDPSKRWSVDSLLEHEFLKWIDE 337

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2146340 AT5G27510 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query:     5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL- 63
             LP+  I  +T+ IL+GL  IHSHG VHCD++ +N L+    D++E +IS F    GL L 
Sbjct:   105 LPDLMIRDFTRMILQGLVSIHSHGYVHCDLKPENVLVFPCGDSYEVKISDF----GLSLQ 160

Query:    64 IYHV-DTWALGRVFV 77
             +  V D W +   FV
Sbjct:   161 VGEVPDHWKIEYPFV 175

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2161690 MAPKKK15 "mitogen-activated protein kinase kinase kinase 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 57/167 (34%), Positives = 81/167 (48%)

Query:     5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---VA-------GKDAHEAE--- 51
             LPE  I  YT+ IL+GL ++H  G+VHCD++  N ++   +A        K   E E   
Sbjct:    99 LPEPLIRSYTRQILKGLMYLHDQGIVHCDVKSQNVMIGGEIAKIVDLGCAKTVEENENLE 158

Query:    52 ---ISAFLQ---RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA 105
                  AF+      G    +  D WALG   +EM T   S W      +A+    +  I 
Sbjct:   159 FSGTPAFMSPEVARGEEQSFPADVWALGCTVIEMATGS-SPWPELNDVVAA----IYKIG 213

Query:   106 FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE 152
             F+ E P  P  +SE G+DFL KC  +  + RWT + +L HPF  +DE
Sbjct:   214 FTGESPVIPVWLSEKGQDFLRKCLRKDPKQRWTVEELLQHPF--LDE 258

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00028457001 SubName- Full=Chromosome chr7 scaffold_44, whole genome shotgun sequence; (388 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	152
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-36
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-21
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-19
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-18
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-17
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-14
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-13
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-13
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-12
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	7e-11
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-11
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-10
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-10
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-10
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-10
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-09
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-09
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-09
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-09
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-09
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	6e-09
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-08
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-08
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-08
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	7e-08
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-07
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	6e-07
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-07
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	8e-07
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	9e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-06
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-06
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-06
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-06
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	5e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	6e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	9e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	9e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	8e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	5e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	7e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	8e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	8e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	0.001
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	0.001
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	0.001
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.001
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.001
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	0.002
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	0.003
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	0.004

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  126 bits (318), Expect = 1e-36
 Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 37/173 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAE 51
             LPE  I +YT+ IL GL ++HS+G+VH DI+G N L+ +            K   + E
Sbjct: 96  GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155

Query: 52  ISAFL-----------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL 94
                                 + +G       D W+LG   +EM T +   W   G  +
Sbjct: 156 TGEGTGSVRGTPYWMAPEVIRGEEYG----RAADIWSLGCTVIEMATGKP-PWSELGNPM 210

Query: 95  ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           A     L  I  S E PE P ++SE+ +DFL KC  R  + R TA  +L HPF
Sbjct: 211 A----ALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPF 259

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 84.9 bits (211), Expect = 7e-21
 Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 43/175 (24%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEA 50
             L E E   Y + IL  L+++HS G+VH D++ +N LL            +A +     
Sbjct: 92  GRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGE 151

Query: 51  EISAF-----------LQRHGLLLIYH--VDTWALGRVFVEMMTAEISAWGSFGR----G 93
           +++ F           L   G    Y   VD W+LG +  E++T         G+    G
Sbjct: 152 KLTTFVGTPEYMAPEVLLGKG----YGKAVDIWSLGVILYELLT---------GKPPFPG 198

Query: 94  LASRDDLLELIA-FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +L + I       P    +IS + +D + K  ++  + R TA+  L HPF
Sbjct: 199 DDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPF 253

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 81.5 bits (202), Expect = 2e-19
 Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 44/178 (24%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV---------------AGKDA 47
             L E E  +    ILRGL+++HS+G++H D++ +N LL                  K +
Sbjct: 93  GPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSS 152

Query: 48  HEA------------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
                          E+      +G      VD W+LG +  E++T +    G       
Sbjct: 153 SSLTTFVGTPWYMAPEVLLGGNGYG----PKVDVWSLGVILYELLTGKPPFSG------E 202

Query: 96  SRDDLLELIA------FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +  D L+LI          + P++ S  SE+ +D + KC  +    R TA+ +L HP+
Sbjct: 203 NILDQLQLIRRILGPPLEFDEPKWSS-GSEEAKDLIKKCLNKDPSKRPTAEEILQHPW 259

Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 78.5 bits (194), Expect = 2e-18
 Identities = 53/179 (29%), Positives = 72/179 (40%), Gaps = 47/179 (26%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV---------------------- 42
           L EH I  YT  +L GL ++HSHG+VH DI+  N  L                       
Sbjct: 96  LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155

Query: 43  --------AGKDAHEA-EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG 93
                   AG  A+ A E+    +  G       D W+LG V +EM T         G+ 
Sbjct: 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHG--RAADIWSLGCVVLEMAT---------GKR 204

Query: 94  LASRDDLLELIAF---SSEVPEFPSN--ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             S  D    I F   +   P  P +  +S +G+DFL +C     + R TA  +L HPF
Sbjct: 205 PWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 75.5 bits (186), Expect = 3e-17
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 32/167 (19%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEI 52
            PE  I  YT+ IL GL+++H    VH DI+G N L+            +A +    +  
Sbjct: 99  FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158

Query: 53  SAF------------LQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            +F             Q+ G  L    D W+LG   +EM T +   W     G+A+    
Sbjct: 159 KSFKGSPYWMAPEVIAQQGGYGL--AADIWSLGCTVLEMATGKPP-WSQL-EGVAA---- 210

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +  I  S E+P  P ++S++ +DF+ KC  R   LR TA  +L HPF
Sbjct: 211 VFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 68.0 bits (167), Expect = 1e-14
 Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 43/173 (24%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQR 58
             PE  +  Y   +L+GL ++H  G++H DI+  N L    KD    +++ F     L  
Sbjct: 95  PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT--TKDGV-VKLADFGVATKLND 151

Query: 59  HGLLLIYHV--------------------DTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
                   V                    D W+LG   +E++T     +           
Sbjct: 152 VSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYY----------- 200

Query: 99  DLLELIAF----SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           DL  + A       + P  P  IS + +DFL +CF +   LR TAK +L HP+
Sbjct: 201 DLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPW 253

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 67.2 bits (165), Expect = 3e-14
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 48/175 (27%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFL- 56
           L E +I    K++L+GL+++HS+G++H DI+  N LL       + E+       SA L 
Sbjct: 95  LTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL-----TSDGEVKLIDFGLSAQLS 149

Query: 57  ----------------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL 94
                                 + +     Y  D W+LG   +E+      A G      
Sbjct: 150 DTKARNTMVGTPYWMAPEVINGKPYD----YKADIWSLGITAIEL------AEGKPPYSE 199

Query: 95  ASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                 L  IA ++  P    P   S++ +DFL KC  +  + R TA+ +L HPF
Sbjct: 200 LPPMKALFKIA-TNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 51/177 (28%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--------EAEIS-AF 55
           + E +I    +++L+GL+++HS  ++H DI+ DN LL   KD           A+++   
Sbjct: 113 MNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL--SKDGSVKLADFGFAAQLTKEK 170

Query: 56  LQRHGLL---------LI----Y--HVDTWALGRVFVEMMTAE--------ISAWGSFGR 92
            +R+ ++         +I    Y   VD W+LG + +EM   E        + A      
Sbjct: 171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA------ 224

Query: 93  GLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                   L LI  +  +P    P   S + +DFL+KC ++  + R +A+ +L HPF
Sbjct: 225 --------LFLIT-TKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 64.5 bits (157), Expect = 3e-13
 Identities = 49/175 (28%), Positives = 69/175 (39%), Gaps = 43/175 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF--------- 55
             E  +  + + IL+GL+++H+ G++H DI+G N +LV  K     +IS F         
Sbjct: 103 FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGAN-ILVDNKGG--IKISDFGISKKLEAN 159

Query: 56  -------LQRHGL---------------LLIYHVDTWALGRVFVEMMTAEISAWGSFGRG 93
                    R  L                     D W+LG + VEM+T +          
Sbjct: 160 SLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK--------HP 211

Query: 94  LASRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                 L  +        PE PSNIS +  DFL K F   H  R TA  +L HPF
Sbjct: 212 FPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 64.4 bits (157), Expect = 4e-13
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 39/172 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF--LQR---- 58
           L E    +YT+ IL G++++HS+ +VH DI+G N L  +  +    +  A   LQ     
Sbjct: 101 LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160

Query: 59  -----------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
                                  +G       D W++G   VEM+T +   W  F   +A
Sbjct: 161 GTGMKSVTGTPYWMSPEVISGEGYG----RKADVWSVGCTVVEMLTEK-PPWAEF-EAMA 214

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +    +  IA     P+ PS++S D R+FL + F+   + R +A+ +L H F
Sbjct: 215 A----IFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 62.4 bits (151), Expect = 2e-12
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 32/172 (18%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL 63
            L E    +YT+ IL G+ ++HS+ +VH DI+G N L  +  +    +  A  +   + +
Sbjct: 102 ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161

Query: 64  I-------------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
                                        D W+LG   VEM+T E   W  +   +A+  
Sbjct: 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAEY-EAMAA-- 217

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
             +  IA     P+ PS+ISE  RDFL   F+     R +A+ +L HPF  +
Sbjct: 218 --IFKIATQPTNPQLPSHISEHARDFLGCIFVEARH-RPSAEELLRHPFAQL 266

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 58.3 bits (141), Expect = 7e-11
 Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 30/166 (18%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----------------VAGKDAHE 49
           E  I  YTK IL GL ++H + +VH DI+GDN L+                 +AG +   
Sbjct: 107 EQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT 166

Query: 50  AEISAFLQRHGLLLIYH--------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
              +  LQ     +I           D W+LG   VEM T +   +   G   A+    +
Sbjct: 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK-PPFIELGEPQAA----M 221

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +      PE P ++S + ++F+ +CF      R +A  +L  PF
Sbjct: 222 FKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 58.0 bits (141), Expect = 7e-11
 Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 40/172 (23%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFL 56
            L E  I    +++L GL+++H  G +H DI+  N LL    D   A+        S   
Sbjct: 94  KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153

Query: 57  QRHGLL---------LI------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL- 100
           +R+  +         +I         D W+LG   +E+             G     DL 
Sbjct: 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAK-----------GEPPLSDLH 202

Query: 101 ----LELIAFSSEVPEFP-SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               L LI   +  P    +  S+  +DF+S C  +  + R +AK +L H F
Sbjct: 203 PMRVLFLIP-KNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKF 253

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 44/179 (24%), Positives = 70/179 (39%), Gaps = 44/179 (24%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAE-------I 52
               +PE  +    + IL+GLD++H+   ++H DI+  N L+       + E       I
Sbjct: 92  KVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI-----NSKGEVKIADFGI 146

Query: 53  SAFLQRHGLL-------LIY-------------HVDTWALGRVFVEMMTAEISAWGSF-- 90
           S  L+            + Y               D W+LG     +   E  A G F  
Sbjct: 147 SKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLG-----LTLLEC-ALGKFPF 200

Query: 91  -GRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              G  S  +L++ I      P  P+   S + RDF+S C  +  + R +A  +L HPF
Sbjct: 201 LPPGQPSFFELMQAICDG-PPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 56.8 bits (137), Expect = 2e-10
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 30/162 (18%)

Query: 12  RYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAE------ISAFLQRHGLL-- 62
            YT+ +LRGL ++H + ++H D++G N L+ + G+    A+      ++A     G    
Sbjct: 107 NYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQG 166

Query: 63  -LIYHV-----------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L+  +                 D W++G V +EM TA+   W +     ++   L+  I
Sbjct: 167 QLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP-WNA--EKHSNHLALIFKI 223

Query: 105 AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           A ++  P  P ++S   RD   +C     + R  ++ +L HP
Sbjct: 224 ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 45/192 (23%), Positives = 72/192 (37%), Gaps = 45/192 (23%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGK 45
             +GLPE  I  Y   +L+GL   HSHG++H D++ +N L+                 G 
Sbjct: 91  RQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGS 150

Query: 46  D--AHEAEISAFLQRHGLLLI------YHVDTWALGRVFVEMMT--------AEISAWGS 89
               +   +     R   LL+        VD W++G +F E+++        +EI     
Sbjct: 151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK 210

Query: 90  FGR--GLASRDDLLELIAFS-SEVPEFP-----------SNISEDGRDFLSKCFIRVHQL 135
             R  G    +   +  + + +    FP            N S    D LS+        
Sbjct: 211 IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHK 270

Query: 136 RWTAKHVLAHPF 147
           R TA+  LAHP+
Sbjct: 271 RITAEQALAHPY 282

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 56.1 bits (135), Expect = 4e-10
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 33/171 (19%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA---------GKDAHEAEISAF 55
           LPE    +YTK IL G+ ++H++ +VH DI+G+N +L+          G     A +   
Sbjct: 99  LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158

Query: 56  LQRHGLLLIYH-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
                +L   H                    D W++G    EM T +     S  R  A 
Sbjct: 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK-PPLASMDRLAA- 216

Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              +  + A    +P  P + S    DF++ C  R    R +A  +L H F
Sbjct: 217 ---MFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 42/168 (25%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVA---------GKDAHEAEI----------- 52
           +T+ +L GL ++HS G++H D++ DN L+ A         G      +I           
Sbjct: 113 FTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQG 172

Query: 53  SAFLQRHGLLLIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDD----LLE 102
           S F     ++  Y       VD W+LG V +EM           GR   S ++    + +
Sbjct: 173 SVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA---------GRRPWSDEEAIAAMFK 223

Query: 103 LIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           L    S  P   +   N+S    DFL+ CF      R TA+ +L HPF
Sbjct: 224 LGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLL-------------------- 41
             +PE  +G+    +L+GL ++H  H ++H D++  N L+                    
Sbjct: 95  GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154

Query: 42  VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
           +A      +   A  +  G       D W+LG   +E+ T     +           +LL
Sbjct: 155 LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFP-YPPENDPPDGIFELL 213

Query: 102 ELIAFSSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           + I  +   P  PS   S D +DF++ C I+  + R + K +L HPF
Sbjct: 214 QYIV-NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPF 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 35/170 (20%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQR------ 58
           E  +    + IL G+ ++H   +VH DI+  N L+ + K+   A+  +S  L +      
Sbjct: 167 EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN 226

Query: 59  -------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
                              HG    Y  D W+LG   +E         G F  G+  + D
Sbjct: 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL------GRFPFGVGRQGD 280

Query: 100 LLELI-AFS-SEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              L+ A   S+ PE P+  S + R F+S C  R    RW+A  +L HPF
Sbjct: 281 WASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330

Length = 353

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 44/191 (23%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEIS---AF-- 55
              G+P   I  Y   +L+GL   HSH ++H D++  N L+        A+     AF  
Sbjct: 93  PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 152

Query: 56  ---LQRHGLLLIYH---------------VDTWALGRVFVEMMT--------AEISAWGS 89
                 H ++ +++               VD W+LG +F EM+T        +EI     
Sbjct: 153 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 212

Query: 90  FGRGLASRDDLL-----ELIAFSSEVPEFP--------SNISEDGRDFLSKCFIRVHQLR 136
             R L + D+++      L  +    P++           + EDGRD LS+        R
Sbjct: 213 IFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKR 272

Query: 137 WTAKHVLAHPF 147
            +AK  LAHPF
Sbjct: 273 ISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 32/169 (18%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISA-------FL 56
            L E+   RYT+ IL+G+ ++HS+ +VH DI+G N L  +  +    +  A        +
Sbjct: 102 ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161

Query: 57  QRHGLLLIY------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
              G+  +                     D W++    VEM+T E   W  +   +A+  
Sbjct: 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT-EKPPWAEY-EAMAA-- 217

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +  IA     P  P  +S+  RDFL + F+   + R TA+ +L HPF
Sbjct: 218 --IFKIATQPTKPMLPDGVSDACRDFLKQIFVEEKR-RPTAEFLLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 32/169 (18%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------L 56
            L E+   +YT+ IL G+ ++HS+ +VH DI+G N L  +  +    +  A        L
Sbjct: 102 ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161

Query: 57  QRHGLLLIY------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
              G+  +                     D W++G   VEM+T E   W  F   +A+  
Sbjct: 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLT-EKPPWAEF-EAMAA-- 217

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +  IA     P  P ++S+  RDFL + F+   +LR +A  +L H F
Sbjct: 218 --IFKIATQPTNPVLPPHVSDHCRDFLKRIFVEA-KLRPSADELLRHTF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.6 bits (127), Expect = 4e-09
 Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 45/184 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF--------- 55
           L E E       IL  L+++HS G++H DI+ +N LL   +D    ++  F         
Sbjct: 98  LSESEALFILAQILSALEYLHSKGIIHRDIKPENILL--DRDGRVVKLIDFGLAKLLPDP 155

Query: 56  ----------------------LQRHGLLLIY---HVDTWALGRVFVEMMTAEISAWGSF 90
                                     GL L Y     D W+LG    E++T         
Sbjct: 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPP--FEG 213

Query: 91  GRGLASRDDLLELIAF-------SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
            +  ++    L++I         S   P  P  IS+   D L K   +  + R ++   L
Sbjct: 214 EKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273

Query: 144 AHPF 147
           +H  
Sbjct: 274 SHDL 277

Length = 384

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 52.7 bits (126), Expect = 6e-09
 Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 36/178 (20%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
           + L E +I    K  L  L+++H + ++H D++  N L     D   A+  +SA     +
Sbjct: 98  RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 157

Query: 57  QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           QR    +                      Y  D W+LG   +EM   E          L 
Sbjct: 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPH-----HELN 212

Query: 96  SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
               LL++    SE P    PS  S + +DFL KC  +    RWT   +L HPF +V+
Sbjct: 213 PMRVLLKIA--KSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 46/177 (25%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH------EAEISAFLQR 58
           L E +I    ++ L+GL ++H  G +H DI+G N LL    D         A+++A + +
Sbjct: 98  LSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK 157

Query: 59  HGLLLI------------------YH--VDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
                I                  Y    D WALG   +E+  AE               
Sbjct: 158 R-KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIEL--AE---------LQPPMF 205

Query: 99  DL-----LELIAFSSEVP---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           DL     L LI+ S+  P   +     S    DF+ KC  +  + R TA  +L HPF
Sbjct: 206 DLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 39/171 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFL 56
           + E +I    ++ L+ L+ +HS+ ++H DI+ DN LL  G D           A+I+   
Sbjct: 112 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQ 169

Query: 57  QRHGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            +   ++               Y   VD W+LG + +EM+  E            + + L
Sbjct: 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP--------YLNENPL 221

Query: 101 --LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             L LIA ++  PE   P  +S   RDFL++C     + R +AK +L HPF
Sbjct: 222 RALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPF 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 50.7 bits (122), Expect = 3e-08
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 41/174 (23%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE-------ISAF 55
           K L E EI       L+GL+++HS+  +H DI+  N LL     A  A+           
Sbjct: 94  KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153

Query: 56  LQRHGLL---------LIYHV------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            +R+ ++         +I  +      D W+LG   +EM  AE         G     D+
Sbjct: 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEM--AE---------GKPPYSDI 202

Query: 101 -----LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                + +I      P    P   S +  DF+ KC ++  + R +A  +L HPF
Sbjct: 203 HPMRAIFMIPNKPP-PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 50.9 bits (122), Expect = 3e-08
 Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 33/168 (19%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE------AEISAFLQR 58
           + E +I      +L+ L  +H+ G++H DI+ D+ LL +            A++S  + R
Sbjct: 112 MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR 171

Query: 59  HGLL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              L              L Y   VD W+LG + +EM+  E            +   L  
Sbjct: 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPP--------YFNEPPLQA 223

Query: 103 LIAFSSEVPEF---PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +      +P        +S   R FL +  +R    R TA  +L HPF
Sbjct: 224 MKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPF 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 31/168 (18%), Positives = 53/168 (31%), Gaps = 63/168 (37%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD----------AHEAEI 52
             L E EI R    IL GL+++HS+G++H D++ +N LL +                   
Sbjct: 87  GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146

Query: 53  SAFLQRHGLLLIY--------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
            + L+       Y                D W+LG +  E+                   
Sbjct: 147 KSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------- 187

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
                                + +D + K   +  + R +AK +L H 
Sbjct: 188 --------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 21/98 (21%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGKDAHE 49
           LPE  +  Y   +L+ LDH+H +G+ H DI+ +N L+               +  K  + 
Sbjct: 97  LPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYT 156

Query: 50  AEISAFLQRHGLLLI------YHVDTWALGRVFVEMMT 81
             IS    R    L+        +D WA+G VF E+++
Sbjct: 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS 194

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 51/177 (28%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------E 49
             E     Y  +I+  L+++HS G+++ D++ +N LL    D H                
Sbjct: 90  FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL--DADGHIKLTDFGLAKELSSEG 147

Query: 50  AEISAF-----------LQR--HGLLLIYHVDTWALGRVFVEMMTAEISAWGS---FGRG 93
           +  + F           L    +G      VD W+LG +  EM+T      G    +   
Sbjct: 148 SRTNTFCGTPEYLAPEVLLGKGYG----KAVDWWSLGVLLYEMLT------GKPPFYAE- 196

Query: 94  LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH---VLAHPF 147
              R ++ E I        FP  +S + RD +S    +    R  +     + AHPF
Sbjct: 197 --DRKEIYEKILKDP--LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 39/171 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFL 56
           + E +I    ++ L+ LD +HS+ ++H DI+ DN LL  G D           A+I+   
Sbjct: 112 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQ 169

Query: 57  QRHGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            +   ++               Y   VD W+LG + +EM+  E            + + L
Sbjct: 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP--------YLNENPL 221

Query: 101 --LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             L LIA ++  PE   P  +S   RDFL++C       R +AK +L HPF
Sbjct: 222 RALYLIA-TNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPF 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 46/183 (25%), Positives = 71/183 (38%), Gaps = 48/183 (26%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEA 50
           +GL E +I    + +L  L+ +HSH ++H D++  N LL            V+ K+    
Sbjct: 98  RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST- 156

Query: 51  EISAFLQRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGS 89
                LQ+    +                      Y  D W+LG   +E+  A++     
Sbjct: 157 -----LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIEL--AQMEPPHH 209

Query: 90  FGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               L     LL+++   SE P    PS  S    DFL  C ++    R TA  +L HPF
Sbjct: 210 ---ELNPMRVLLKIL--KSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264

Query: 148 PSV 150
            S 
Sbjct: 265 VSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 29/163 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--EAEISAFLQR---- 58
           +PE EI R    +LRGL  +H   ++H D++  N LLVA       +  IS  L++    
Sbjct: 100 IPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159

Query: 59  --------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSF-GRGLASRDDLLEL 103
                          G    Y  D W+LG +  EM T        F  R +      L  
Sbjct: 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAP----PFEARSMQD----LRY 211

Query: 104 IAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
                + P  P   S+D ++F+        +LR     +LA P
Sbjct: 212 KVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 6e-07
 Identities = 48/194 (24%), Positives = 71/194 (36%), Gaps = 54/194 (27%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
              GLP   I    + +LRG+D +HSH +VH D++  N L+ +     + +I+ F    G
Sbjct: 100 PKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG---QVKIADF----G 152

Query: 61  LLLIYH----------------------------VDTWALGRVFVEMM--------TAEI 84
           L  IY                             VD W++G +F E+         T+E 
Sbjct: 153 LARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA 212

Query: 85  SAWGSFGR--GLASRDD-----LLELIAFSS----EVPEFPSNISEDGRDFLSKCFIRVH 133
                     GL S ++      L   +F S        F   I E+G D L K      
Sbjct: 213 DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNP 272

Query: 134 QLRWTAKHVLAHPF 147
             R +A   L HP+
Sbjct: 273 HKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 7e-07
 Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 50/181 (27%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--------EAEISA 54
           K L E  I    ++ LRGL ++H + ++H DI+G N LL   K+A          A++ +
Sbjct: 108 KRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT--KNAEVKLVDFGVSAQLDS 165

Query: 55  FLQRHGLLL----------I-----------YHVDTWALGRVFVEMMTAEISAWGSFGRG 93
            L R    +          I              D W+LG   +E+             G
Sbjct: 166 TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIEL-----------ADG 214

Query: 94  LASRDDL-----LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
                D+     L  I   +  P    P N S+   DF+S+C I+ ++ R   + +L HP
Sbjct: 215 KPPLCDMHPMRALFKIP-RNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273

Query: 147 F 147
           F
Sbjct: 274 F 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 46.9 bits (111), Expect = 8e-07
 Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 33/168 (19%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQR 58
           L E +I    + +L+ L ++HS G++H DI+ D+ LL     V   D    A+IS  + +
Sbjct: 114 LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 173

Query: 59  HGLLL----------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              L+                   VD W+LG + +EM+  E   +        S   +  
Sbjct: 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF--------SDSPVQA 225

Query: 103 LIAFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +       P    N   IS   RDFL +   R  Q R TA+ +L HPF
Sbjct: 226 MKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPF 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 46.7 bits (111), Expect = 9e-07
 Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 45/175 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA--- 54
           K L E EI       L+GL ++HSH  +H DI+  N LL     V   D   A + +   
Sbjct: 110 KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169

Query: 55  -------FLQRHGLLLI----Y--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRD-DL 100
                  ++    +L +    Y   VD W+LG   +E               LA R   L
Sbjct: 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE---------------LAERKPPL 214

Query: 101 LELIAFSS-------EVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             + A S+       + P   SN  S+  R+F+  C  ++ Q R +++ +L H F
Sbjct: 215 FNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 35/169 (20%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQR 58
           + E +I    ++ L+ L+ +H++ ++H DI+ DN LL     V   D    A+I+    +
Sbjct: 112 MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171

Query: 59  HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
              ++               Y   VD W+LG + +EM+  E            + + L  
Sbjct: 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP--------YLNENPLRA 223

Query: 101 LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           L LIA ++  PE   P  +S   RDFL++C     + R +AK +L HPF
Sbjct: 224 LYLIA-TNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 40/184 (21%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAFLQR 58
           G+P   I      +LRGLD +HSH +VH D++  N L+ +       D   A I +F   
Sbjct: 106 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 165

Query: 59  HGLLLI---YH-------------VDTWALGRVFVEMM--------TAEISAWGSFGR-- 92
              +++   Y              VD W++G +F EM         ++++   G      
Sbjct: 166 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 225

Query: 93  GLASRDDL-----LELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
           GL   +D      L   AF S+    + +F ++I E G+D L KC       R +A   L
Sbjct: 226 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285

Query: 144 AHPF 147
           +HP+
Sbjct: 286 SHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 36/176 (20%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
           +GL E +I    + +L  L ++HS  ++H D++  N LL    D   A+  +SA     L
Sbjct: 105 RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164

Query: 57  QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           QR    +                      Y  D W+LG   +EM   E          L 
Sbjct: 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH-----HELN 219

Query: 96  SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
               LL++    SE P    PS  S + RDFL     +  + R +A  +L HPF S
Sbjct: 220 PMRVLLKIA--KSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVS 273

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 33/167 (19%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
            PE +I  +   +   L ++HS  ++H DI+  N  L +       +  IS  L     L
Sbjct: 100 FPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159

Query: 63  L------IYHV--------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
                   Y++              D W+LG V  E+ T +   +          ++LLE
Sbjct: 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLK-HPFEG--------ENLLE 210

Query: 103 LIA--FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           L       + P  PS  S + R+ +S    +  + R +   +L  PF
Sbjct: 211 LALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 45.1 bits (106), Expect = 3e-06
 Identities = 42/175 (24%), Positives = 65/175 (37%), Gaps = 43/175 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRH--- 59
           L E  I    ++ILRGL H+H H ++H DI+G N LL    +    +  +SA L R    
Sbjct: 108 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 167

Query: 60  ----------------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                                      +  D W+LG   +EM             G    
Sbjct: 168 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM-----------AEGAPPL 216

Query: 98  DDLLELIAF----SSEVPEFPS-NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            D+  + A      +  P   S   S+  + F+  C ++ H  R T + ++ HPF
Sbjct: 217 CDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 50/198 (25%), Positives = 75/198 (37%), Gaps = 60/198 (30%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVAGK 45
           +G+PEH I +     L+ ++  H H  +H D++ +N L                 L    
Sbjct: 95  RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154

Query: 46  DAHEAEISAFLQRHGLLLI----YH--VDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           D +   ++    R   LL+    Y   VD WA+G VF E++T +   W   G+   S  D
Sbjct: 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQ-PLWP--GK---SDVD 208

Query: 100 LLELIA-------------FSS-------EVPE----------FPSNISEDGRDFLSKCF 129
            L LI              FS+        +PE          FP NIS     FL  C 
Sbjct: 209 QLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFP-NISSPALSFLKGCL 267

Query: 130 IRVHQLRWTAKHVLAHPF 147
                 R + + +L HP+
Sbjct: 268 QMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 44.8 bits (107), Expect = 4e-06
 Identities = 52/202 (25%), Positives = 72/202 (35%), Gaps = 74/202 (36%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD---------AHEAE---- 51
             E  I      IL+GL HIH HG  H D++ +N LLV+G +         A E      
Sbjct: 96  FSESVIRSIIYQILQGLAHIHKHGFFHRDLKPEN-LLVSGPEVVKIADFGLAREIRSRPP 154

Query: 52  ----ISAFLQRHGLLLIYH------VDTWALGRVFVEMMT--------AEI-------SA 86
               +S    R   +L+        VD WALG +  E+ T        +EI       S 
Sbjct: 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSV 214

Query: 87  WGSFGRG-------LASRDDLLELIAFSSEVPEFP--------SNISEDGRDFLSKCFIR 131
            G+  +        LAS+      + F    P+F          N S +  D +      
Sbjct: 215 LGTPTKQDWPEGYKLASK------LGFRF--PQFAPTSLHQLIPNASPEAIDLIKDM--- 263

Query: 132 VHQLRW------TAKHVLAHPF 147
              LRW      TA   L HP+
Sbjct: 264 ---LRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 43/164 (26%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAFL- 56
           Y  +I+ GL  +HS G+V+ D++ DN LL    D H               +A+   F  
Sbjct: 101 YAAEIICGLQFLHSKGIVYRDLKLDNILL--DTDGHIKIADFGMCKENMLGDAKTCTFCG 158

Query: 57  ------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
                       Q++       VD W+ G +  EM+  +    G         ++L + I
Sbjct: 159 TPDYIAPEILLGQKYN----TSVDWWSFGVLLYEMLIGQSPFHGH------DEEELFQSI 208

Query: 105 AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK-HVLAHPF 147
              +  P +P  ++ + +D L K F+R  + R   K  +  HPF
Sbjct: 209 RMDN--PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPF 250

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 44.5 bits (105), Expect = 5e-06
 Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 39/162 (24%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y  +I+ GL  +HS G+++ D++ DN +L   +D H               +   S F  
Sbjct: 101 YAAEIVCGLQFLHSKGIIYRDLKLDNVML--DRDGHIKIADFGMCKENVFGDNRASTFCG 158

Query: 56  ---------LQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
                    LQ  GL   + VD W+ G +  EM+  +    G         D+L E I  
Sbjct: 159 TPDYIAPEILQ--GLKYTFSVDWWSFGVLLYEMLIGQSPFHGD------DEDELFESI-- 208

Query: 107 SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-TAKHVLAHPF 147
             + P +P  I+++ +D L K F R    R     ++  HPF
Sbjct: 209 RVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPF 250

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 51/185 (27%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFL-- 56
              GL E  I    K++L+GL+++HS+G +H DI+  N LL        A+  +SA L  
Sbjct: 95  PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154

Query: 57  -------------------------QRHGLLLIYH--VDTWALGRVFVEMMTAEISAWGS 89
                                    Q HG    Y    D W+ G   +E+ T        
Sbjct: 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHG----YDFKADIWSFGITAIELAT-------- 202

Query: 90  FGRGLASRDDLLE--LIAFSSEVPEFPSNI-----SEDGRDFLSKCFIRVHQLRWTAKHV 142
            G    S+   ++  ++   ++ P   +       S+  R  +S C  +    R TA+ +
Sbjct: 203 -GAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261

Query: 143 LAHPF 147
           L H F
Sbjct: 262 LKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 36/168 (21%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------------------- 41
           E ++  +  +I+  L+++HS G++H DI+ DN LL                         
Sbjct: 99  EEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158

Query: 42  VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
            +G   + A      Q +       VD W+LG    E +  +       G     RD + 
Sbjct: 159 TSGTPGYMAPEVLCRQGYS----VAVDWWSLGVTAYECLRGKRPY---RGHSRTIRDQIR 211

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW--TAKHVLAHPF 147
                 +    +P+  S +  D ++K   R  Q R     K +  HP+
Sbjct: 212 AK--QETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 44.0 bits (104), Expect = 6e-06
 Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 35/160 (21%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAFLQ 57
           Y  +I+ GL  +H  G+++ D++ DN LL   KD H               E + S F  
Sbjct: 101 YAAEIICGLQFLHKKGIIYRDLKLDNVLL--DKDGHIKIADFGMCKENMNGEGKASTFCG 158

Query: 58  R---------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS 108
                      G      VD W+ G +  EM+  +    G         D+L + I   +
Sbjct: 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE------DEDELFDSIL--N 210

Query: 109 EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK-HVLAHPF 147
           + P FP  IS++ +D LSK F R    R      +  HPF
Sbjct: 211 DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPF 250

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 43.9 bits (103), Expect = 7e-06
 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 39/171 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFL 56
           + E +I    ++ L+ L+ +HS+ ++H DI+ DN LL  G D           A+I+   
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQ 170

Query: 57  QRHGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            +   ++               Y   VD W+LG + +EM+  E            + + L
Sbjct: 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--------YLNENPL 222

Query: 101 --LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             L LIA ++  PE   P  +S   RDFL++C     + R +AK +L H F
Sbjct: 223 RALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           L E     Y  +I+  L+++HS+G++H D++ DN L+
Sbjct: 90  LDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI 126

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 43.6 bits (103), Expect = 9e-06
 Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 38/172 (22%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISA 54
           E  +G+  + +L+GL ++HS  ++H DI+  N LL            V+G +   +    
Sbjct: 104 EKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG-ELVNSLAGT 162

Query: 55  FL--------QR-HGLLLIYHVDTWALGRVFVEMMTAEISAWGSF-----GRGLASRDDL 100
           F         +R  G       D W+LG   +E+      A   F     G       +L
Sbjct: 163 FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV------AQNRFPFPPEGEPPLGPIEL 216

Query: 101 LELI--AFSSEVPEFPSNI---SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           L  I    + E+ + P N    SE+ +DF+ +C  +    R T   +L HP+
Sbjct: 217 LSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 39/170 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
           L E  I    ++IL+GLD++HS   +H DI+  N LL    D   A+           ++
Sbjct: 98  LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157

Query: 58  RHGLL---------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
           R+  +                 +  D W+LG   +E+            +G     DL  
Sbjct: 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL-----------AKGEPPNSDLHP 206

Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              L LI  +S  P      S+  ++F+  C  +  + R TAK +L H F
Sbjct: 207 MRVLFLIPKNSP-PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 23/103 (22%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVAGKD 46
           GL E  + +Y   ILRG++  HSH ++H DI+ +N L                 L A  +
Sbjct: 96  GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155

Query: 47  AHEAEISAFLQRHGLLLI------YHVDTWALGRVFVEMMTAE 83
            +   ++    R   LL+        VD WA+G +  EM+T E
Sbjct: 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGE 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 49/193 (25%), Positives = 67/193 (34%), Gaps = 54/193 (27%)

Query: 2   AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGL 61
             GLP   I    +  LRGLD +H++ +VH D++ +N L+ +G     A+        GL
Sbjct: 102 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADF-------GL 154

Query: 62  LLIYH----------------------------VDTWALGRVFVEMMTAEI-----SAWG 88
             IY                             VD W++G +F EM   +      S   
Sbjct: 155 ARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 214

Query: 89  SFGR-----GLASRDD-----LLELIAFSSEVP----EFPSNISEDGRDFLSKCFIRVHQ 134
             G+     GL   DD      L   AFS   P         I E G   L +       
Sbjct: 215 QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPH 274

Query: 135 LRWTAKHVLAHPF 147
            R +A   L HPF
Sbjct: 275 KRISAFRALQHPF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 62/198 (31%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR--- 58
             L  + I      +LRGL + HSH ++H D++  N +L+        +++ F L R   
Sbjct: 93  GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQN-ILINRDG--VLKLADFGLARAFG 149

Query: 59  -------HG----------LLLIYH-----VDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
                  H           +LL        VD W++G +F EM+T +    G       S
Sbjct: 150 IPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD------S 203

Query: 97  RDDLL-------------------ELIAFSSEVPEFPSN--------ISEDGRDFLSKCF 129
             D L                   +L  +    P+FP          +  +G D LSK  
Sbjct: 204 EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKML 263

Query: 130 IRVHQLRWTAKHVLAHPF 147
                 R +AK  L HP+
Sbjct: 264 QYNPAKRISAKEALKHPY 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 24/100 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
           LPE ++  Y + +L+G+ ++H++G++H D++  N L+ A      A+  ++         
Sbjct: 96  LPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155

Query: 63  LIYH----------------------VDTWALGRVFVEMM 80
           L  H                      VD WA+G +F E++
Sbjct: 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELL 195

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 34/173 (19%)

Query: 3   KGLPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGK---- 45
             +PE  +G+ T  I++ L ++   HG++H D++  N LL            ++G+    
Sbjct: 109 GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168

Query: 46  DAH--EAEISAFLQRHGL-----LLIYHV--DTWALGRVFVEMMTAEISAWGSFGRGLAS 96
            A    A  +A++    +        Y +  D W+LG   VE+ T +        +   +
Sbjct: 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPY-----KNCKT 223

Query: 97  RDDLLELIAFSSEVPEFPS--NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             ++L  I    E P  P     S D   F+  C  + H+ R   + +L HPF
Sbjct: 224 EFEVLTKIL-QEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQR 58
           L E  I    ++ILRGL H+H+H ++H DI+G N LL    +    +  +SA L R
Sbjct: 118 LKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 41/165 (24%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGL---------- 61
           Y  +I+  L ++HS  +V+ D++ +N +L   KD H  +I+ F L + G+          
Sbjct: 100 YGAEIVSALGYLHSCDVVYRDLKLENLML--DKDGH-IKITDFGLCKEGISDGATMKTFC 156

Query: 62  ---------LLIYH-----VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
                    +L  +     VD W LG V  EMM   +  +          + L ELI   
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM- 209

Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
            E   FP  +S + +  L+    +  + R       AK ++ H F
Sbjct: 210 -EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF 253

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 24/99 (24%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGLL 62
           GLPE    +Y  +++ G++ +H  G++H DI+ +N L+         +++ F L R+GL 
Sbjct: 93  GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLE 149

Query: 63  --------------------LIYHVDTWALGRVFVEMMT 81
                                    D W+LG V  E + 
Sbjct: 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLF 188

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 40.8 bits (95), Expect = 8e-05
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 45/173 (26%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF--------- 55
           L E +I    ++IL+GLD++HS   +H DI+  N LL    +  E +++ F         
Sbjct: 98  LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDT 154

Query: 56  -LQRHGLL---------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
            ++R+  +                    D W+LG   +E+            +G     +
Sbjct: 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------AKGEPPHSE 203

Query: 100 L-----LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           L     L LI   +  P    N S+  ++F+  C  +    R TAK +L H F
Sbjct: 204 LHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 15/160 (9%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL 62
           K L E EI   T   L+GL ++HSH ++H DI+  N LL        A+  +        
Sbjct: 120 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN 179

Query: 63  LIYHVDTWALGRVFVEM----MTAEISAW--GSFGRGLASRD-DLLELIAFSS------- 108
                  W    V + M       ++  W  G     LA R   L  + A S+       
Sbjct: 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 239

Query: 109 EVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           E P   SN  S+  R+F+  C  ++ Q R T++ +L H F
Sbjct: 240 ESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 24/107 (22%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----------------LVA 43
           S  GLP   +  Y   +L+ + + HSH ++H DI+ +N L                 L A
Sbjct: 93  SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRA 152

Query: 44  GKDAHEAEISA--FLQRHGLLLIYH-----VDTWALGRVFVEMMTAE 83
              +   +  A  + +   LL+        VD WA+G +  E++  E
Sbjct: 153 RPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 41/169 (24%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQRH 59
           E +I    K+IL+GLD++HS   +H DI+  N LL    D   A+           ++R+
Sbjct: 100 EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159

Query: 60  GLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL- 103
             +         +I         D W+LG   +E+            +G     D+  + 
Sbjct: 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL-----------AKGEPPNSDMHPMR 208

Query: 104 IAFSSEVPEFPS-----NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           + F   +P+          S+  ++F+  C  +    R TAK +L H F
Sbjct: 209 VLF--LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 28/144 (19%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------VAGKDAHE 49
           G PE     YT  I+ GL+H+H   +++ D++ +N LL              V  KD   
Sbjct: 93  GFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS 152

Query: 50  -----AEISAFLQRHGLL---LIYHVDTWALGRVFVEMMTAEISAWGSF-GRGLASRDDL 100
                A    F+    L      + VD +ALG    EM    I+A G F  RG    +  
Sbjct: 153 KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEM----IAARGPFRARGEKVENKE 208

Query: 101 LELIAFSSEVPEFPSNISEDGRDF 124
           L+    +  V  +P   S   + F
Sbjct: 209 LKQRILNDSV-TYPDKFSPASKSF 231

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 43/177 (24%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
           + +PEH +GR    +++GL ++ S  ++H D++  N L+                     
Sbjct: 90  RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149

Query: 42  ---VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSF-------G 91
                G +A+ A      +++G+    H D W+LG  F+E+      A G F        
Sbjct: 150 AKTYVGTNAYMAPERISGEQYGI----HSDVWSLGISFMEL------ALGRFPYPQIQKN 199

Query: 92  RGLASRDDLLELIAFSSEVPEFP-SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +G      LL+ I    + P  P    SE    F+++C  +  + R   ++++ HPF
Sbjct: 200 QGSLMPLQLLQCIV-DEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 40/193 (20%), Positives = 72/193 (37%), Gaps = 48/193 (24%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR- 58
             + LP   I  +   +L+G+ H H HG++H D++  N L+   K     +I+   L R 
Sbjct: 103 PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV--DKQKGLLKIADLGLGRA 160

Query: 59  ---------HGLLLIYH---------------VDTWALGRVFVEMMT--------AEISA 86
                    H ++ +++               VD W++G +F EM          +E+  
Sbjct: 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ 220

Query: 87  WGSFGR--GLASRDDLLELIAFSS--EVPEFPS--------NISEDGRDFLSKCFIRVHQ 134
                +  G  +      +       E P++          ++S +G D L K       
Sbjct: 221 LLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPA 280

Query: 135 LRWTAKHVLAHPF 147
            R +AK  L HP+
Sbjct: 281 KRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 57/185 (30%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR-HG---------- 60
           Y    LRGL+++HS+ ++H D++ +N LL+A       +++ F L R  G          
Sbjct: 107 YMLMTLRGLEYLHSNWILHRDLKPNN-LLIASDG--VLKLADFGLARSFGSPNRKMTHQV 163

Query: 61  ---------LLL---IYH--VDTWALGRVFVEMM--------TAEI-------SAWGSFG 91
                    LL     Y   VD W++G +F E++         ++I        A G+  
Sbjct: 164 VTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPT 223

Query: 92  R----GLASRDDLLELIAFSSEVPEFP-----SNISEDGRDFLSKCFIRVHQLRWTAKHV 142
                G+ S  D +E        P  P        S+D  D L +        R TA+  
Sbjct: 224 EENWPGVTSLPDYVEF----KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQA 279

Query: 143 LAHPF 147
           L HP+
Sbjct: 280 LEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 32/171 (18%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
           G PE     Y   I+ GL+H+H   +V+ D++ +N LL            +A +     +
Sbjct: 91  GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK 150

Query: 52  ISAFLQRHGLL---------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
           I       G +           + VD +ALG    EM    I+    F R    + +  E
Sbjct: 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEM----IAGRSPF-RQRKEKVEKEE 205

Query: 103 LIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
           L   + E+  E+P   S + +D       +  + R      +A  V  HP 
Sbjct: 206 LKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPL 256

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
             L E     Y  +IL  L+++HS G++H D++ +N LL   KD H
Sbjct: 97  GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL--DKDMH 140

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 15/33 (45%), Positives = 24/33 (72%)

Query: 9   EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           +I  Y K +L GL ++HS+G++H DI+G N L+
Sbjct: 101 QIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI 133

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
           E +I      +L+ L  +H+ G++H DI+ D+ LL     V   D    A++S  + R  
Sbjct: 115 EEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174

Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 226

Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    N   +S   + FL +  +R    R TA  +L HPF
Sbjct: 227 MIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 45/175 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISA--- 54
           K L E EI   T   L+GL ++HSH ++H D++  N LL     V   D   A I A   
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169

Query: 55  -------FLQRHGLLLIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRD-DL 100
                  ++    +L +        VD W+LG   +E               LA R   L
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE---------------LAERKPPL 214

Query: 101 LELIAFSS-------EVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             + A S+       E P   S   SE  R+F+  C  ++ Q R T++ +L H F
Sbjct: 215 FNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 44/184 (23%), Positives = 65/184 (35%), Gaps = 54/184 (29%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA--------------------HEA-- 50
           Y   IL+G+   HS  ++H D++  N LL+  K                      HE   
Sbjct: 106 YLYQILQGILFCHSRRVLHRDLKPQN-LLIDNKGVIKLADFGLARAFGIPVRVYTHEVVT 164

Query: 51  ------EISAFLQRHGLLLIYHVDTWALGRVFVEMMT--------AEISAWGSFGRGLAS 96
                 E+     R+       VD W++G +F EM T        +EI       R L +
Sbjct: 165 LWYRAPEVLLGSPRYST----PVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGT 220

Query: 97  RDDLL-----ELIAFSSEVP--------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
             + +      L  + +  P            N+ EDG D L K  I     R +AK  L
Sbjct: 221 PTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280

Query: 144 AHPF 147
            HP+
Sbjct: 281 NHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 41/167 (24%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHGLL--------- 62
           Y  +I+  LD++HS  +V+ D++ +N +L   KD H  +I+ F L + G+          
Sbjct: 100 YGAEIVSALDYLHSGKIVYRDLKLENLML--DKDGH-IKITDFGLCKEGITDAATMKTFC 156

Query: 63  ---------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
                              VD W LG V  EMM   +  +          + L ELI   
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM- 209

Query: 108 SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPFPS 149
            E  +FP  +S D +  LS   I+    R       AK ++ H F +
Sbjct: 210 -EDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFT 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 43/186 (23%), Positives = 65/186 (34%), Gaps = 67/186 (36%)

Query: 17  ILRGLDHIHSHGLVHCDIQGDNTLL------------------------VAGKDAHEAEI 52
           ILRGL ++HS G+VH D++  N L+                        V+ +     EI
Sbjct: 117 ILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEI 176

Query: 53  SAFLQRHGLLLIYHVDTWALGRVFVEMMTAE--------------------------ISA 86
               Q++ +     VD W+ G +F EM+  +                          I+ 
Sbjct: 177 MLTWQKYDV----EVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232

Query: 87  WGS-----FGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH 141
             S     F + L  R    E + FS +      N      D L K  +   Q R +A  
Sbjct: 233 ICSENTLRFVQSLPKR----EPVPFSEKFK----NADPSAIDLLEKMLVFDPQKRISAAE 284

Query: 142 VLAHPF 147
            LAHP+
Sbjct: 285 ALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 44/183 (24%), Positives = 68/183 (37%), Gaps = 45/183 (24%)

Query: 10  IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA--------------------HE 49
           I  Y   ILRG+ + HSH ++H D++  N L+    +A                    HE
Sbjct: 104 IKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHE 163

Query: 50  AEISAFLQRHGLLLIYH----VDTWALGRVFVEMMT--------AEISAWGSFGRGLASR 97
                +     LL   H    VD W++G +F EM+         +EI       R L + 
Sbjct: 164 VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTP 223

Query: 98  DD-----LLELIAFSSEVPEFPS--------NISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
           ++     +  L  + S  P++P          +   G D LSK        R TA+  L 
Sbjct: 224 NEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283

Query: 145 HPF 147
           H +
Sbjct: 284 HEY 286

Length = 294

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 31/165 (18%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------AHEAEISAFLQRHG 60
           E +I      +LR L ++H+ G++H DI+ D+ LL +            A++S  + +  
Sbjct: 117 EEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176

Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGS--FGRGLASRDDLLE 102
            L              L Y   VD W+LG + +EM+  E   +           RD+L  
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP 236

Query: 103 LIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +  S +V       S   R FL    +R    R TA+ +L HPF
Sbjct: 237 RVKDSHKV-------SSVLRGFLDLMLVREPSQRATAQELLQHPF 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 37.9 bits (88), Expect = 8e-04
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 8/82 (9%)

Query: 68  DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL-ELIAF-SSEVPEFPSNISEDGRDFL 125
           D W+LG   +EM      A G +     +  ++  +L A    + P  PS  S+D +DF+
Sbjct: 189 DVWSLGLSILEM------ALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFV 242

Query: 126 SKCFIRVHQLRWTAKHVLAHPF 147
           +KC  ++   R T   +L HP+
Sbjct: 243 AKCLNKIPNRRPTYAQLLEHPW 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 49/197 (24%), Positives = 74/197 (37%), Gaps = 62/197 (31%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           GL    I  Y   +L+G+ + HSH ++H D++  N LL+  + A                
Sbjct: 95  GLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQN-LLIDREGALKLADFGLARAFGVPV 153

Query: 48  ----HEA--------EISAFLQRHGLLLIYH----VDTWALGRVFVEMMT--------AE 83
               HE         EI        LL        VD W++G +F EM+         +E
Sbjct: 154 RTYTHEVVTLWYRAPEI--------LLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE 205

Query: 84  ISAWGSFGRGLASRDDLL-----ELIAFSSEVPEFPS--------NISEDGRDFLSKCFI 130
           I       R L + D+ +      L  +    P++          N+ EDG D LSK  +
Sbjct: 206 IDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLV 265

Query: 131 RVHQLRWTAKHVLAHPF 147
                R +AK  L HP+
Sbjct: 266 YDPAKRISAKAALQHPY 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 15/160 (9%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL 62
           K L E EI   T   L+GL ++HSH ++H DI+  N LL        A+  +  +     
Sbjct: 116 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN 175

Query: 63  LIYHVDTWALGRVFVEM----MTAEISAW--GSFGRGLASRDD-LLELIAFSS------- 108
                  W    V + M       ++  W  G     LA R   L  + A S+       
Sbjct: 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 235

Query: 109 EVPEFPSNISEDG-RDFLSKCFIRVHQLRWTAKHVLAHPF 147
           + P   SN   D  R F+  C  ++ Q R  +  +L H F
Sbjct: 236 DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDF 275

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           +PE     YT +++  LD IHS G +H D++ DN LL
Sbjct: 139 IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 175

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 17/45 (37%), Positives = 23/45 (51%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
           GLPE  I    KD+L  LD+IHS G +H  ++  + LL       
Sbjct: 97  GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVV 141

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           +PE     YT +++  LD IHS GL+H D++ DN LL
Sbjct: 139 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL 175

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 35/160 (21%), Positives = 53/160 (33%), Gaps = 38/160 (23%)

Query: 18  LRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------------------EA 50
           L GL H+H +  +H D++G+N LL                                    
Sbjct: 134 LMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAP 193

Query: 51  EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV 110
           E+ A  Q+         D W+LG   +E+        G     LA    +  L       
Sbjct: 194 EVIACEQQLDSTYDARCDVWSLGITAIEL--------GDGDPPLADLHPMRALFKIPRNP 245

Query: 111 P---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           P     P   S +  DF+ KC  + ++ R T   +L H F
Sbjct: 246 PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 38/160 (23%)

Query: 18  LRGLDHIHSHGLVHCDIQGDNTLLVA---------GKDAH------------------EA 50
           L GL H+H++ ++H D++G+N LL           G  A                     
Sbjct: 138 LLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAP 197

Query: 51  EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV 110
           E+ A  Q++        D W+LG   +E+        G     L     +  L       
Sbjct: 198 EVIACEQQYDYSYDARCDVWSLGITAIEL--------GDGDPPLFDMHPVKTLFKIPRNP 249

Query: 111 PE---FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           P     P         F+S+C I+  + R +  H+L HPF
Sbjct: 250 PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 64/202 (31%)

Query: 1   SAKGLPEHEIGR-YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------- 46
           S  G  + EI + +   +L+GL   HSH ++H D++  N L+    +             
Sbjct: 91  SCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFG 150

Query: 47  ----AHEAEISAFLQRHGLLL----IYH--VDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                + AE+     R   +L    +Y   +D W+ G +F E+  A        GR L  
Sbjct: 151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA--------GRPLFP 202

Query: 95  -ASRDDLLELIAFS-------------SEVPEFP---------------SNISEDGRDFL 125
               DD L+ I F              S++P++                  ++  GRD L
Sbjct: 203 GNDVDDQLKRI-FRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLL 261

Query: 126 SKCFIRVHQLRWTAKHVLAHPF 147
               +     R +A+  L HP+
Sbjct: 262 QNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
            PE     Y  +++  LD +H  G +H DI+ DN L+    D H
Sbjct: 98  FPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI--DADGH 139

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           K   +  I    KD+L  L++IH HG+ H DI+ +N ++
Sbjct: 121 KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV 159

Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
KOG0578	550	consensus p21-activated serine/threonine protein k	99.98
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.98
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.98
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.97
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.97
KOG0605	550	consensus NDR and related serine/threonine kinases	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.97
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.97
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.96
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.96
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.96
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.96
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.96
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.96
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.96
KOG0610	459	consensus Putative serine/threonine protein kinase	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.96
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.96
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.96
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.95
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.95
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.95
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.95
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.95
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.95
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.95
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
KOG0589	426	consensus Serine/threonine protein kinase [General	99.95
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.95
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.95
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.95
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.95
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.95
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.95
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.95
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.95
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.95
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.95
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.95
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.95
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.95
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.95
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.95
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.95
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.95
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.95
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.95
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.95
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.94
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.94
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.94
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.94
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.94
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.94
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.94
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.94
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.94
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.94
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.94
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.94
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.94
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.94
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.94
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.94
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.94
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.94
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.94
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.94
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.94
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.94
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.94
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.94
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.94
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.94
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.94
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.94
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.94
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.94
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.94
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.94
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.94
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.94
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.93
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.93
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.93
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.93
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.93
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.93
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.93
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.93
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.93
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.93
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.93
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.93
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.93
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.93
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.93
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.93
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.93
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.93
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.93
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.93
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
KOG0584	632	consensus Serine/threonine protein kinase [General	99.92
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.92
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.92
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.92
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.92
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.92
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.92
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.92
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.92
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.92
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.92
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.92
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.92
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.91
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.91
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.91
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.91
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.91
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.91
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.9
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.9
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.9
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.89
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.89
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.89
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.89
KOG0586	596	consensus Serine/threonine protein kinase [General	99.88
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.88
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.88
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.88
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.87
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.87
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.87
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.87
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.86
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.85
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.85
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.85
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.85
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.85
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.84
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.82
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.8
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.8
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.8
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.8
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.77
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.76
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.76
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.75
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.73
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.72
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.71
KOG3653	534	consensus Transforming growth factor beta/activin	99.69
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.6
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.59
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.57
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.56
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.56
KOG1152	772	consensus Signal transduction serine/threonine kin	99.56
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.55
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.5
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.48
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.47
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.46
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.24
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.19
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.13
PRK12274	218	serine/threonine protein kinase; Provisional	99.11
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.1
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.03
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.02
smart00090	237	RIO RIO-like kinase.	98.92
PRK09188	365	serine/threonine protein kinase; Provisional	98.87
PRK10345	210	hypothetical protein; Provisional	98.74
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.73
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.71
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.66
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.64
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.59
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.51
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.46
PRK14879	211	serine/threonine protein kinase; Provisional	98.45
KOG1243	690	consensus Protein kinase [General function predict	98.45
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.44
COG4248	637	Uncharacterized protein with protein kinase and he	98.37
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.19
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.17
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.15
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.1
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.08
KOG3087	229	consensus Serine/threonine protein kinase [General	97.98
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.98
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.91
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.84
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.68
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.52
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.34
PRK09902	216	hypothetical protein; Provisional	97.32
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.18
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.09
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.93
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.48
KOG1093	725	consensus Predicted protein kinase (contains TBC a	94.45
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.21
PHA03111	444	Ser/Thr kinase; Provisional	92.63
PRK05231	319	homoserine kinase; Provisional	92.24
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	92.03
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	92.0
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	91.82
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	91.43
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	91.22
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	91.09
PRK12396	409	5-methylribose kinase; Reviewed	90.35
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	90.15
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	89.58
COG0661	517	AarF Predicted unusual protein kinase [General fun	89.31
PF01636	239	APH: Phosphotransferase enzyme family This family	88.71
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	88.26
COG2334	331	Putative homoserine kinase type II (protein kinase	87.75
PLN02236	344	choline kinase	87.11
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	86.42
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	86.19
PRK09550	401	mtnK methylthioribose kinase; Reviewed	86.13
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	86.09
KOG2464	246	consensus Serine/threonine kinase (haspin family)	85.89
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	85.5
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	84.44
PRK06149	972	hypothetical protein; Provisional	83.47
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	83.24
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	82.58
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	82.4
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	80.44

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-37  Score=214.17  Aligned_cols=144  Identities=27%  Similarity=0.402  Sum_probs=123.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~   58 (152)
                      ++++|..+..++++|+.||.|||+ .+|+||||||+|+|+++.   +.+||.|||                       ..
T Consensus       173 g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNsk---GeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi  249 (364)
T KOG0581|consen  173 GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSK---GEVKICDFGVSGILVNSIANTFVGTSAYMSPERI  249 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccC---CCEEeccccccHHhhhhhcccccccccccChhhh
Confidence            568999999999999999999995 899999999999999988   777888887                       34


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCC-CChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .|..|+.++||||||+.+.|+++|+.|+... .......-++...+.. ..+|.+|.. +++++++|+..||..||.+||
T Consensus       250 ~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~-~~~~~~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~  327 (364)
T KOG0581|consen  250 SGESYSVKSDIWSLGLSLLELAIGRFPYPPP-NPPYLDIFELLCAIVD-EPPPRLPEGEFSPEFRSFVSCCLRKDPSERP  327 (364)
T ss_pred             cCCcCCcccceecccHHHHHHhhCCCCCCCc-CCCCCCHHHHHHHHhc-CCCCCCCcccCCHHHHHHHHHHhcCCcccCC
Confidence            5667789999999999999999999777664 2223356677777764 346777886 999999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.|+++|||+++.
T Consensus       328 s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  328 SAKQLLQHPFIKKF  341 (364)
T ss_pred             CHHHHhcCHHHhhc
Confidence            99999999999864

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-36  Score=215.88  Aligned_cols=138  Identities=28%  Similarity=0.411  Sum_probs=117.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.|++..++.|+.||+.||+|||++|||||||||+|||++.+   +.++|+|||..                        
T Consensus       169 Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~d---mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~  245 (604)
T KOG0592|consen  169 GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKD---GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRS  245 (604)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCC---CcEEEeeccccccCChhhccccCccCcccccCccc
Confidence            468999999999999999999999999999999999999999   88899999821                        


Q ss_pred             --hc------------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHH
Q 039869           59 --HG------------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        59 --~~------------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (152)
                        .|            ...+.++|+|+|||++|+|+.|++||.+.      +...+.+.+....  -++|.++++.+.+|
T Consensus       246 SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~------NeyliFqkI~~l~--y~fp~~fp~~a~dL  317 (604)
T KOG0592|consen  246 SFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA------NEYLIFQKIQALD--YEFPEGFPEDARDL  317 (604)
T ss_pred             ceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc------cHHHHHHHHHHhc--ccCCCCCCHHHHHH
Confidence              11            11256799999999999999999888776      5555555554333  35778999999999


Q ss_pred             HHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          125 LSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      +.++|..||+.|++++++.+||||.+-
T Consensus       318 v~KLLv~dp~~Rlt~~qIk~HpFF~~V  344 (604)
T KOG0592|consen  318 IKKLLVRDPSDRLTSQQIKAHPFFEGV  344 (604)
T ss_pred             HHHHHccCccccccHHHHhhCcccccC
Confidence            999999999999999999999999864

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-36  Score=211.95  Aligned_cols=144  Identities=25%  Similarity=0.275  Sum_probs=120.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------hhcCCC------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------RHGLLL------   63 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------~~~~~~------   63 (152)
                      ++.+.++.-+.+++|++.||.|||+.||+||||||+|||+..+...-.++++|||.            +.|++.      
T Consensus       270 nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEV  349 (475)
T KOG0615|consen  270 NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEV  349 (475)
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhh
Confidence            56788999999999999999999999999999999999998765556778999982            223331      


Q ss_pred             ---------CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccc
Q 039869           64 ---------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        64 ---------~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                               ..++|+||+||+||-+++|.+||.+..     ......+++..+++.  +..+..++++..++|..||..|
T Consensus       350 l~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~-----~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd  424 (475)
T KOG0615|consen  350 LASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY-----TDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVD  424 (475)
T ss_pred             eecCCeecccchheeeeccceEEEEeccCCCccccc-----CCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC
Confidence                     347899999999999999998887764     334456666656543  3556779999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~  150 (152)
                      |++||++.++|+||||+.
T Consensus       425 P~~R~s~~eaL~hpW~~~  442 (475)
T KOG0615|consen  425 PENRPSADEALNHPWFKD  442 (475)
T ss_pred             cccCcCHHHHhcChhhhc
Confidence            999999999999999984

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-34  Score=205.61  Aligned_cols=142  Identities=25%  Similarity=0.392  Sum_probs=113.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +++|++..++.|+.||+.||+|+|.+|+.|||+||||||+..+   -.++|+|||.                        
T Consensus       104 ~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~---~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEv  180 (538)
T KOG0661|consen  104 NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGN---DVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEV  180 (538)
T ss_pred             CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEeccc---ceeEecccccccccccCCCcchhhhcccccchHH
Confidence            4679999999999999999999999999999999999999865   6889999982                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH---------------------HhcCC------
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI---------------------AFSSE------  109 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~------  109 (152)
                       .+...|+.++||||+||+++|+.+-++.|.|..     ..+.+.+.-                     .+...      
T Consensus       181 LLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-----E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~  255 (538)
T KOG0661|consen  181 LLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS-----EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSP  255 (538)
T ss_pred             hhhccccCCchHHHHHHHHHHHHHHhcccCCCCc-----HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCC
Confidence             233445788999999999999999997777653     222222221                     11000      


Q ss_pred             CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          110 VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       110 ~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ...+-...+.++.++|.+|+.+||++|||+.++++||||+..
T Consensus       256 l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  256 LKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             hHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence            001224488999999999999999999999999999999974

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-34  Score=211.52  Aligned_cols=138  Identities=25%  Similarity=0.395  Sum_probs=119.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------hcCC------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------HGLL------   62 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------~~~~------   62 (152)
                      +++|+|.+++.+.+||+.||.|||+++|+|||||..|++++++   ..+||+|||..             .|++      
T Consensus       112 rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~---~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPE  188 (592)
T KOG0575|consen  112 RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNEN---MNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPE  188 (592)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCc---CcEEecccceeeeecCcccccceecCCCcccChh
Confidence            4789999999999999999999999999999999999999998   88999999822             2222      


Q ss_pred             ------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           63 ------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        63 ------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                            .+.-+||||+||++|.++.|++||...      .-.+....+....+  .+|..++.++.+||.++|..+|.+|
T Consensus       189 Vl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk------~vkety~~Ik~~~Y--~~P~~ls~~A~dLI~~lL~~~P~~R  260 (592)
T KOG0575|consen  189 VLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK------TVKETYNKIKLNEY--SMPSHLSAEAKDLIRKLLRPNPSER  260 (592)
T ss_pred             HhccCCCCCchhhhhhhhHHHhhhhCCCCcccc------hHHHHHHHHHhcCc--ccccccCHHHHHHHHHHhcCCcccC
Confidence                  356699999999999999999777655      55666666665554  4567999999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.+++.|+||..
T Consensus       261 psl~~vL~h~Ff~~  274 (592)
T KOG0575|consen  261 PSLDEVLDHPFFKS  274 (592)
T ss_pred             CCHHHHhcCHhhhC
Confidence            99999999999943

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-34  Score=212.81  Aligned_cols=139  Identities=27%  Similarity=0.377  Sum_probs=123.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------H
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------Q   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~   57 (152)
                      +++|++.++.++++||+.||.|+|..+|+|||+||+|+|++.+   ..++|+|||                        .
T Consensus       106 kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~---~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEI  182 (786)
T KOG0588|consen  106 KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVK---NNIKIADFGMASLEVPGKLLETSCGSPHYAAPEI  182 (786)
T ss_pred             hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcc---cCEeeeccceeecccCCccccccCCCcccCCchh
Confidence            5789999999999999999999999999999999999999987   558999998                        2


Q ss_pred             hhcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..|.+| ..++||||+|||||++++|+.||.+.      +.+.+..++..+..  ++|..++.++.+||++||..||++|
T Consensus       183 V~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd------Nir~LLlKV~~G~f--~MPs~Is~eaQdLLr~ml~VDp~~R  254 (786)
T KOG0588|consen  183 VSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD------NIRVLLLKVQRGVF--EMPSNISSEAQDLLRRMLDVDPSTR  254 (786)
T ss_pred             hcCCCCCCCccccchhHHHHHHHHhCCCCCCCc------cHHHHHHHHHcCcc--cCCCcCCHHHHHHHHHHhccCcccc
Confidence            234444 36799999999999999999888755      77888888876554  6789999999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      .|.+++++|||+++.
T Consensus       255 iT~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  255 ITTEEILKHPFLSGY  269 (786)
T ss_pred             ccHHHHhhCchhhcC
Confidence            999999999999864

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-34  Score=202.86  Aligned_cols=140  Identities=39%  Similarity=0.689  Sum_probs=116.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec-CCCchhHHHHHHHHhh----------------cCC----
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH----------------GLL----   62 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~~----------------~~~----   62 (152)
                      +|++..++.+++||++||.|||++|++|+||||+|||++. +   +.++++|||...                |++    
T Consensus       113 ~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~---~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~ma  189 (313)
T KOG0198|consen  113 KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSN---GDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMA  189 (313)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCC---CeEEeccCccccccccccccccccccccCCccccC
Confidence            7999999999999999999999999999999999999987 5   678888888211                111    


Q ss_pred             ---------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           63 ---------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        63 ---------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                               ....+|+||+||++.||+||+ ++|...    .........+......|.+|..++.++.+|+.+|+..+|
T Consensus       190 PEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~-~PW~~~----~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p  264 (313)
T KOG0198|consen  190 PEVIRNGEVARRESDIWSLGCTVVEMLTGK-PPWSEF----FEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDP  264 (313)
T ss_pred             chhhcCCCcCCccchhhhcCCEEEeccCCC-Ccchhh----cchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCc
Confidence                     123799999999999999998 555442    144444445554556778999999999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~~  151 (152)
                      ++|||+.++|+|||.++.
T Consensus       265 ~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  265 EKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             ccCcCHHHHhhChhhhcc
Confidence            999999999999999765

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-33  Score=188.76  Aligned_cols=142  Identities=21%  Similarity=0.318  Sum_probs=123.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------Hhhc
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------QRHG   60 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~~~~   60 (152)
                      ++|..+..+++||+++|.|+|.+||+|||+||+|+++.+..+...+++++||                        ....
T Consensus       107 ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrk  186 (355)
T KOG0033|consen  107 YSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKK  186 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhc
Confidence            5788999999999999999999999999999999999887777888999998                        2233


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      -+++..+|||+.||+||-++.|.+|||+.      +..++.+.+..+...  ++....++++..+++++||..||.+|.|
T Consensus       187 dpy~kpvDiW~cGViLfiLL~G~~PF~~~------~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt  260 (355)
T KOG0033|consen  187 DPYSKPVDIWACGVILYILLVGYPPFWDE------DQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT  260 (355)
T ss_pred             CCCCCcchhhhhhHHHHHHHhCCCCCCCc------cHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc
Confidence            34577899999999999999999999997      677888877766543  3355679999999999999999999999


Q ss_pred             HHHHhcCCCCCCCC
Q 039869          139 AKHVLAHPFPSVDE  152 (152)
Q Consensus       139 ~~~~l~h~~~~~~~  152 (152)
                      +.++|.|||+++-|
T Consensus       261 a~EAL~HpWi~~r~  274 (355)
T KOG0033|consen  261 ADEALKHPWICNRE  274 (355)
T ss_pred             HHHHhCCchhcchH
Confidence            99999999998743

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-33  Score=190.95  Aligned_cols=139  Identities=26%  Similarity=0.336  Sum_probs=118.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .-.++++.++.|++|+++|+.|||.++|+||||||+|||++.|   ..++++|||..                       
T Consensus       117 ~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn---~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEt  193 (411)
T KOG0599|consen  117 KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDN---MNIKISDFGFACQLEPGEKLRELCGTPGYLAPET  193 (411)
T ss_pred             heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccc---cceEEeccceeeccCCchhHHHhcCCCcccChhh
Confidence            3468899999999999999999999999999999999999999   88899999822                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhh
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCF  129 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l  129 (152)
                             ....|+.-+|+||+|+++|.++.|.+|||..      ...-..+.+..+....  +.+.+++....++|.+||
T Consensus       194 ikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR------kQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlL  267 (411)
T KOG0599|consen  194 IKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR------KQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLL  267 (411)
T ss_pred             eeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHhcccccCCcchhhccccHHHHHHHHH
Confidence                   1223466799999999999999999999987      4555566666666543  334668999999999999


Q ss_pred             ccccCCCcCHHHHhcCCCCC
Q 039869          130 IRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       130 ~~~p~~R~~~~~~l~h~~~~  149 (152)
                      +.||.+|.|++++|.||||.
T Consensus       268 qVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  268 QVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             eeCchhcccHHHHhcChHHH
Confidence            99999999999999999994

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=6.8e-33  Score=189.35  Aligned_cols=151  Identities=18%  Similarity=0.197  Sum_probs=123.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------------   60 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~---------------------   60 (152)
                      .+.|+|.++..|++||..|++|||+.+|.||||||+|+|+..++..-.++++|||....                     
T Consensus       155 ~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPev  234 (400)
T KOG0604|consen  155 DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEV  234 (400)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHH
Confidence            35699999999999999999999999999999999999999887778899999983321                     


Q ss_pred             ---CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           61 ---LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        61 ---~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                         ..|+.+.|+||+||++|-+++|.+||++...........-.-....-..+.+-+..+|+...++|+++|..+|.+|.
T Consensus       235 lg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRl  314 (400)
T KOG0604|consen  235 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERL  314 (400)
T ss_pred             hCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhe
Confidence               12467899999999999999999999988765544443333233222233334456899999999999999999999


Q ss_pred             CHHHHhcCCCCCCCC
Q 039869          138 TAKHVLAHPFPSVDE  152 (152)
Q Consensus       138 ~~~~~l~h~~~~~~~  152 (152)
                      |+.+++.|||+.+++
T Consensus       315 TI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  315 TIEEVMDHPWINQYE  329 (400)
T ss_pred             eHHHhhcCchhcccc
Confidence            999999999998753

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.3e-32  Score=200.17  Aligned_cols=139  Identities=28%  Similarity=0.472  Sum_probs=117.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------HhhcCC--------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------QRHGLL--------   62 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------~~~~~~--------   62 (152)
                      .++|.+++.|+++++.||+|||.+||+|||||.+|||++..   +.++++|||             +..|++        
T Consensus       365 ~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~---g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVv  441 (550)
T KOG0578|consen  365 RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD---GSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVV  441 (550)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC---CcEEEeeeeeeeccccccCccccccCCCCccchhhh
Confidence            47899999999999999999999999999999999999988   678999998             223333        


Q ss_pred             ----CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           63 ----LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        63 ----~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                          |..++||||||++..||+-|.+||+...     ....+......+......+..++..+.+||.+||..|+++|++
T Consensus       442 trk~YG~KVDIWSLGIMaIEMveGEPPYlnE~-----PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras  516 (550)
T KOG0578|consen  442 TRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN-----PLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS  516 (550)
T ss_pred             hhcccCccccchhhhhHHHHHhcCCCCccCCC-----hHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC
Confidence                4678999999999999999997777653     3334444444455556677889999999999999999999999


Q ss_pred             HHHHhcCCCCCC
Q 039869          139 AKHVLAHPFPSV  150 (152)
Q Consensus       139 ~~~~l~h~~~~~  150 (152)
                      +.++|+||||+.
T Consensus       517 A~eLL~HpFl~~  528 (550)
T KOG0578|consen  517 AKELLEHPFLKM  528 (550)
T ss_pred             HHHHhcChhhhh
Confidence            999999999963

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=2.2e-32  Score=190.07  Aligned_cols=146  Identities=27%  Similarity=0.341  Sum_probs=112.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------------   60 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~---------------------   60 (152)
                      ++.|+++.+.....|++.||.|+|+.+++|||+||+|++++.+   -.+++.|||..+.                     
T Consensus       119 ~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~---c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRA  195 (359)
T KOG0660|consen  119 QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNAD---CDLKICDFGLARYLDKFFEDGFMTEYVATRWYRA  195 (359)
T ss_pred             CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccC---CCEEeccccceeeccccCcccchhcceeeeeecC
Confidence            4559999999999999999999999999999999999999887   5668888884332                     


Q ss_pred             -------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----------CChHH--------HHHHHHhcCCCCC---
Q 039869           61 -------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----------ASRDD--------LLELIAFSSEVPE---  112 (152)
Q Consensus        61 -------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----------~~~~~--------~~~~~~~~~~~~~---  112 (152)
                             ..|+.+.||||+||+++||++|++.|.|...-..          .+...        ....+......+.   
T Consensus       196 PElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f  275 (359)
T KOG0660|consen  196 PELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPF  275 (359)
T ss_pred             HHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCH
Confidence                   2347789999999999999999988877642111          01111        1111111111121   


Q ss_pred             --CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 --FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 --~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        .....++.+.+++.+||..||.+|+|++++|+|||+..
T Consensus       276 ~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  276 SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence              22568889999999999999999999999999999975

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=3.8e-32  Score=196.16  Aligned_cols=139  Identities=24%  Similarity=0.366  Sum_probs=116.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .++++|..++.+++|++.||+|+|++||+||||||+|++++.+.  +.++++|||..                       
T Consensus       114 ~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~--~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPE  191 (370)
T KOG0583|consen  114 KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE--GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPE  191 (370)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC--CCEEEeccccccccCCCCCcccCCCCCcccCCHH
Confidence            47899999999999999999999999999999999999998764  67778888722                       


Q ss_pred             --hcCC-C-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCC-ChhHHHHHHHhhcccc
Q 039869           59 --HGLL-L-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 --~~~~-~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~l~~~p  133 (152)
                        .+.. | ..++||||+|++||.|++|..||.+.      +...+...+.  .....+|..+ +.++.+++.+||..+|
T Consensus       192 vl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~------~~~~l~~ki~--~~~~~~p~~~~S~~~~~Li~~mL~~~P  263 (370)
T KOG0583|consen  192 VLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS------NVPNLYRKIR--KGEFKIPSYLLSPEARSLIEKMLVPDP  263 (370)
T ss_pred             HhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc------cHHHHHHHHh--cCCccCCCCcCCHHHHHHHHHHcCCCc
Confidence              2222 3 36799999999999999999888775      4455555543  3344567777 9999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~  150 (152)
                      .+|+++.+++.||||+.
T Consensus       264 ~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  264 STRITLLEILEHPWFQK  280 (370)
T ss_pred             ccCCCHHHHhhChhhcc
Confidence            99999999999999996

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.97  E-value=4.4e-32  Score=189.06  Aligned_cols=140  Identities=26%  Similarity=0.361  Sum_probs=120.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      .+.|++..++.|+.+|+.||.|||+.||+||||||+|||++..   +.++++|||                         
T Consensus       119 eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~---GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPE  195 (357)
T KOG0598|consen  119 EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ---GHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPE  195 (357)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC---CcEEEeccccchhcccCCCccccccCCccccChH
Confidence            4579999999999999999999999999999999999999988   788888887                         


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           57 QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        57 ~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ...+..++..+|-||+|+++|+|++|.+||.+.      +.....+.+...+ .+..|..++.++++++.++|..+|++|
T Consensus       196 il~~~gy~~~vDWWsLGillYeML~G~pPF~~~------~~~~~~~~I~~~k-~~~~p~~ls~~ardll~~LL~rdp~~R  268 (357)
T KOG0598|consen  196 ILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE------DVKKMYDKILKGK-LPLPPGYLSEEARDLLKKLLKRDPRQR  268 (357)
T ss_pred             HHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc------cHHHHHHHHhcCc-CCCCCccCCHHHHHHHHHHhccCHHHh
Confidence            334455688999999999999999999888887      6566666666554 344566699999999999999999999


Q ss_pred             c----CHHHHhcCCCCCCC
Q 039869          137 W----TAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~----~~~~~l~h~~~~~~  151 (152)
                      .    .+.++-.||||..-
T Consensus       269 Lg~~~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  269 LGGPGDAEEIKRHPFFKGI  287 (357)
T ss_pred             cCCCCChHHhhcCcccccC
Confidence            6    67889999999863

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=7.2e-32  Score=192.61  Aligned_cols=139  Identities=24%  Similarity=0.360  Sum_probs=114.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus        89 ~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~---~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE  165 (323)
T cd05571          89 ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE  165 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC---CCEEEeeCCCCcccccCCCcccceecCccccChh
Confidence            3568999999999999999999999999999999999999877   55677777621                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++|+||+||++|++++|+.||.+.      +.......+...  ...++..++.++.+++.+||..||++|
T Consensus       166 ~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~------~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05571         166 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             hhcCCCCCccccCcccchhhhhhhcCCCCCCCC------CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHccCCHHHc
Confidence              1233467899999999999999999777654      444444444322  345677899999999999999999999


Q ss_pred             c-----CHHHHhcCCCCCCC
Q 039869          137 W-----TAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~-----~~~~~l~h~~~~~~  151 (152)
                      |     ++.++++||||+..
T Consensus       238 ~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         238 LGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            9     89999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=2.4e-31  Score=196.89  Aligned_cols=142  Identities=26%  Similarity=0.376  Sum_probs=108.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      +..+++..++.++.||+.||+|||+.+|+||||||+||+++.+.  ..++++|||...                      
T Consensus       164 ~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~--~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~  241 (440)
T PTZ00036        164 NHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT--HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPEL  241 (440)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC--CceeeeccccchhccCCCCcccCCCCcCccCHHH
Confidence            35688999999999999999999999999999999999997542  357788887221                      


Q ss_pred             --c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--------------------------CC
Q 039869           60 --G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--------------------------EV  110 (152)
Q Consensus        60 --~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~  110 (152)
                        + ..++.++|+||+||++|+|++|.+||.+..     ....+........                          ..
T Consensus       242 ~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~-----~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~  316 (440)
T PTZ00036        242 MLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS-----SVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLK  316 (440)
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHH
Confidence              1 235678999999999999999997776542     1222211111000                          00


Q ss_pred             CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ..+|...+.++.+||.+||..||.+||++.+++.||||+.
T Consensus       317 ~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        317 KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             HHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence            1134457789999999999999999999999999999964

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=191.65  Aligned_cols=138  Identities=25%  Similarity=0.407  Sum_probs=114.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------cCC----
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------GLL----   62 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------~~~----   62 (152)
                      |++.+++.|++.++.||.|||..||+||||||+|+|++++   +.+||+|||...                  |++    
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~---g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~A  283 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD---GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFA  283 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC---CcEEeeccceeeecccCCccccHHHHhhcCCCccccc
Confidence            8899999999999999999999999999999999999988   889999998211                  111    


Q ss_pred             ------------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhc
Q 039869           63 ------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        63 ------------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                                  ...+.||||+||.||.++.|+.||.+.      ...++..++.-.....+....+.+.+.++|.++|.
T Consensus       284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~------~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~  357 (576)
T KOG0585|consen  284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD------FELELFDKIVNDPLEFPENPEINEDLKDLIKRLLE  357 (576)
T ss_pred             hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc------hHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhh
Confidence                        146789999999999999999999887      44555555543333323334578999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .||++|.+..++..|||...+
T Consensus       358 KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  358 KDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             cChhheeehhhheecceeccC
Confidence            999999999999999998654

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.97  E-value=2.4e-31  Score=181.96  Aligned_cols=139  Identities=26%  Similarity=0.417  Sum_probs=107.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .+++.+.++.|+.|++.|+.|+|+++++||||||+||++..+   +.+++.|||..                        
T Consensus        96 ~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~---gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPEL  172 (396)
T KOG0593|consen   96 NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQN---GVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPEL  172 (396)
T ss_pred             CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecC---CcEEeccchhhHhhcCCcchhhhhhhhhhccChhh
Confidence            357889999999999999999999999999999999999988   78888888822                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCCC------------------C-----
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEVP------------------E-----  112 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------~-----  112 (152)
                        ..+.|...+||||+||++.||++|.+.+.+.-     +.+.+.... ..+...|                  +     
T Consensus       173 LvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S-----DiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~e  247 (396)
T KOG0593|consen  173 LVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS-----DIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPE  247 (396)
T ss_pred             hcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc-----hHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCcc
Confidence              12445678999999999999999995555541     333332221 1111111                  0     


Q ss_pred             -CC---CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          113 -FP---SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       113 -~~---~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                       +.   ...+.-+.+|++.||.+||++|++.++++.||||+
T Consensus       248 pLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  248 PLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             chhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence             00   23556689999999999999999999999999995

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=4.6e-31  Score=185.54  Aligned_cols=138  Identities=30%  Similarity=0.467  Sum_probs=105.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       105 ~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (290)
T cd07862         105 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL  181 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC---CCEEEccccceEeccCCcccccccccccccChHHH
Confidence            458899999999999999999999999999999999999877   56677777621                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC------------------------CCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV------------------------PEFP  114 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~  114 (152)
                      .+..++.++|+||+||++|++++|..||.+..     ....+..........                        ....
T Consensus       182 ~~~~~~~~~DiwslG~il~el~~g~~~f~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (290)
T cd07862         182 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-----DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV  256 (290)
T ss_pred             hCCCCCCccchHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHc
Confidence            12334678999999999999999997776542     222221111110000                        0011


Q ss_pred             CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          115 SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       115 ~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ..++..+.+++.+||..||++||++.++++||||
T Consensus       257 ~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         257 TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             cCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            3467788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=1.9e-31  Score=187.37  Aligned_cols=142  Identities=20%  Similarity=0.281  Sum_probs=111.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||+|||+.+++||||||+||+++.+   +.++++|||..                        
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~  173 (285)
T cd05631          97 PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDR---GHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVI  173 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC---CCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhh
Confidence            468899999999999999999999999999999999999876   55677777622                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++|+||+||++|++++|+.||.+.....  ....+...+  .......+..++.++.+++.+||..||++||+
T Consensus       174 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05631         174 NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVDRRV--KEDQEEYSEKFSEDAKSICRMLLTKNPKERLG  249 (285)
T ss_pred             cCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHHHHh--hcccccCCccCCHHHHHHHHHHhhcCHHHhcC
Confidence            22334678999999999999999997776543110  112222222  22334566778999999999999999999997


Q ss_pred             -----HHHHhcCCCCCCC
Q 039869          139 -----AKHVLAHPFPSVD  151 (152)
Q Consensus       139 -----~~~~l~h~~~~~~  151 (152)
                           +.++++||||++-
T Consensus       250 ~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         250 CRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             CCCCCHHHHhcCHhhcCC
Confidence                 8999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=2.6e-31  Score=190.18  Aligned_cols=139  Identities=19%  Similarity=0.269  Sum_probs=114.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------h
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------H   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~   59 (152)
                      .+.+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                      .
T Consensus       112 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~  188 (329)
T PTZ00263        112 AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK---GHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQ  188 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCC---CCEEEeeccCceEcCCCcceecCChhhcCHHHHc
Confidence            3568899999999999999999999999999999999999877   56677777622                      2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC-
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT-  138 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~-  138 (152)
                      +..++.++|+||+||++|++++|..||.+.      ........+...  ...+|..++..+.+++.+||..||++|++ 
T Consensus       189 ~~~~~~~~DiwslG~il~elltg~~pf~~~------~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  260 (329)
T PTZ00263        189 SKGHGKAVDWWTMGVLLYEFIAGYPPFFDD------TPFRIYEKILAG--RLKFPNWFDGRARDLVKGLLQTDHTKRLGT  260 (329)
T ss_pred             CCCCCCcceeechHHHHHHHHcCCCCCCCC------CHHHHHHHHhcC--CcCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            333467899999999999999999777654      444444444433  34567778999999999999999999996 


Q ss_pred             ----HHHHhcCCCCCCC
Q 039869          139 ----AKHVLAHPFPSVD  151 (152)
Q Consensus       139 ----~~~~l~h~~~~~~  151 (152)
                          +.+++.||||++.
T Consensus       261 ~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        261 LKGGVADVKNHPYFHGA  277 (329)
T ss_pred             CCCCHHHHhcCCccCCC
Confidence                7999999999863

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.7e-31  Score=185.91  Aligned_cols=138  Identities=22%  Similarity=0.256  Sum_probs=113.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hh
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RH   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~   59 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                      ..
T Consensus        95 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~  171 (291)
T cd05612          95 SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKE---GHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQ  171 (291)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC---CCEEEEecCcchhccCCcccccCChhhcCHHHHc
Confidence            3568899999999999999999999999999999999999877   4566777662                      22


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC-
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT-  138 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~-  138 (152)
                      +..++.++|+||+||++|++++|+.||.+.      ........+...  ...++..++..+.+++.+||..||.+|++ 
T Consensus       172 ~~~~~~~~DiwSlG~il~~l~~g~~pf~~~------~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  243 (291)
T cd05612         172 SKGHNKAVDWWALGILIYEMLVGYPPFFDD------NPFGIYEKILAG--KLEFPRHLDLYAKDLIKKLLVVDRTRRLGN  243 (291)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhC--CcCCCccCCHHHHHHHHHHcCCCHHHccCC
Confidence            333467899999999999999999777654      444555554433  24566778999999999999999999995 


Q ss_pred             ----HHHHhcCCCCCC
Q 039869          139 ----AKHVLAHPFPSV  150 (152)
Q Consensus       139 ----~~~~l~h~~~~~  150 (152)
                          +.++++||||+.
T Consensus       244 ~~~~~~~~l~h~~~~~  259 (291)
T cd05612         244 MKNGADDVKNHRWFKS  259 (291)
T ss_pred             ccCCHHHHhcCccccC
Confidence                999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.97  E-value=2.9e-31  Score=180.78  Aligned_cols=140  Identities=24%  Similarity=0.312  Sum_probs=122.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH----------------------Hhh
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL----------------------QRH   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~----------------------~~~   59 (152)
                      .++|++..++.|+.||+.||+|||+++|++||+||+|||++.+   +.++++|||                      ...
T Consensus       138 ~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~---G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~  214 (355)
T KOG0616|consen  138 SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQN---GHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQ  214 (355)
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccC---CcEEEEeccceEEecCcEEEecCCccccChHHhh
Confidence            3689999999999999999999999999999999999999999   788889998                      233


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc--
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW--  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~--  137 (152)
                      ..++..++|=||||+++|||+.|.+||++.      ++..+.+++..+..  .+|..++.++.+|+.++|..|-.+|.  
T Consensus       215 sk~ynkavDWWalGVLIYEMlaG~pPF~~~------~~~~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R~gn  286 (355)
T KOG0616|consen  215 SKGYNKAVDWWALGVLIYEMLAGYPPFYDD------NPIQIYEKILEGKV--KFPSYFSSDAKDLLKKLLQVDLTKRFGN  286 (355)
T ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCCCcCC------ChHHHHHHHHhCcc--cCCcccCHHHHHHHHHHHhhhhHhhhcC
Confidence            444578899999999999999999888887      66777787776554  67889999999999999999999994  


Q ss_pred             ---CHHHHhcCCCCCCCC
Q 039869          138 ---TAKHVLAHPFPSVDE  152 (152)
Q Consensus       138 ---~~~~~l~h~~~~~~~  152 (152)
                         ...++..||||++.+
T Consensus       287 lknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  287 LKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             cCCCccccccCccccccc
Confidence               567899999998753

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.97  E-value=2.3e-31  Score=196.41  Aligned_cols=142  Identities=28%  Similarity=0.444  Sum_probs=108.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH----------------------Hhhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL----------------------QRHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~----------------------~~~~   60 (152)
                      .+|+...++.++.||+.||.+||+.+|||+||||||||+..-.+. .+|++|||                      ...|
T Consensus       284 ~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~-~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILG  362 (586)
T KOG0667|consen  284 RGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS-RIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILG  362 (586)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC-ceeEEecccccccCCcceeeeeccccccchhhcc
Confidence            458899999999999999999999999999999999999755444 77999998                      3457


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--------------------------------
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--------------------------------  108 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------  108 (152)
                      .+|+.+.||||||||++||.+|.+.|.|....     +.+...+....                                
T Consensus       363 lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~-----DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~  437 (586)
T KOG0667|consen  363 LPYDTAIDMWSLGCILAELFTGEPLFPGDNEY-----DQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSA  437 (586)
T ss_pred             CCCCCccceeehhhhHHhHhcCccccCCCCHH-----HHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecc
Confidence            77899999999999999999998666654211     11111110000                                


Q ss_pred             --------------------CCC-C-------CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          109 --------------------EVP-E-------FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       109 --------------------~~~-~-------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                          ..| .       .+..-...+.+||.+||.+||.+|+|..+++.|||+.+
T Consensus       438 ~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  438 PRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             cccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence                                001 0       01122345799999999999999999999999999985

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=6.2e-31  Score=186.15  Aligned_cols=141  Identities=26%  Similarity=0.338  Sum_probs=104.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.|++.||+|||+.+++||||||+||+++.+   +.++++|||...                       
T Consensus        98 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  174 (303)
T cd07869          98 GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT---GELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDV  174 (303)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC---CCEEECCCCcceeccCCCccCCCCcccCCCCChHH
Confidence            468899999999999999999999999999999999999877   556777776221                       


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCC--------------CCC-----C--
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSE--------------VPE-----F--  113 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~-----~--  113 (152)
                         ...++.++|+||+||++|++++|..||.+..     +..........  +..              .+.     .  
T Consensus       175 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T cd07869         175 LLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK-----DIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPK  249 (303)
T ss_pred             HcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc-----cHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCc
Confidence               1223567899999999999999997776542     22221111100  000              000     0  


Q ss_pred             -------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          114 -------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       114 -------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                             ....+.++.+++.+||..||++|||+.++++||||++.
T Consensus       250 ~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence                   01245678899999999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.97  E-value=1.1e-30  Score=175.62  Aligned_cols=141  Identities=27%  Similarity=0.349  Sum_probs=109.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ...|+..+++.++.++++||+|+|++.|+||||||.|+|++++   +.+|++|||...                      
T Consensus        95 ~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~---g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPE  171 (318)
T KOG0659|consen   95 NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSD---GQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPE  171 (318)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCC---CcEEeecccchhccCCCCcccccceeeeeccChH
Confidence            4568899999999999999999999999999999999999988   889999998322                      


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCCC-----------------------
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEVP-----------------------  111 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------------------  111 (152)
                          ...|...+||||.||+++|++.+.+.+.|..     +.+.+.... ..+...+                       
T Consensus       172 LLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s-----DidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~  246 (318)
T KOG0659|consen  172 LLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS-----DIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPL  246 (318)
T ss_pred             HhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc-----hHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcc
Confidence                2234667999999999999999995555442     222221111 1111111                       


Q ss_pred             -CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 -EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 -~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       .+....+.+..+|+.+++.+||.+|+++.|+++|+||..
T Consensus       247 ~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  247 NNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             ccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence             022446777899999999999999999999999999974

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.97  E-value=1e-30  Score=189.45  Aligned_cols=141  Identities=23%  Similarity=0.335  Sum_probs=119.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      .+.|+++.++.|+.+++.|+..+|..|++||||||+|+|||..   +.++++|||.                        
T Consensus       235 ~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~---GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~  311 (550)
T KOG0605|consen  235 KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAK---GHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLS  311 (550)
T ss_pred             cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCC---CCEeeccccccchhhhhhhhhhhcchhhhhhhhc
Confidence            4679999999999999999999999999999999999999988   8888988871                        


Q ss_pred             ------------------------------------------------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCc
Q 039869           58 ------------------------------------------------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGS   89 (152)
Q Consensus        58 ------------------------------------------------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~   89 (152)
                                                                      ..|..|...+|-||||||+||++.|-+||++.
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~  391 (550)
T KOG0605|consen  312 EAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSE  391 (550)
T ss_pred             cCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence                                                            11222355689999999999999999899888


Q ss_pred             cCCCCCChHHHHHHHHhcCCCCCCC--CCCChhHHHHHHHhhccccCCCcC---HHHHhcCCCCCCCC
Q 039869           90 FGRGLASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWT---AKHVLAHPFPSVDE  152 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~---~~~~l~h~~~~~~~  152 (152)
                            .+.+..+++...+.....|  ..++.++.+||.+|+. ||++|..   ++|+.+||||++.+
T Consensus       392 ------tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  392 ------TPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             ------CHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence                  6677777776666444444  4478999999999999 9999985   88999999998753

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=8.3e-31  Score=184.39  Aligned_cols=137  Identities=24%  Similarity=0.366  Sum_probs=104.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        98 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~---~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~  174 (288)
T cd07871          98 NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK---GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDV  174 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC---CCEEECcCcceeeccCCCccccCceecccccChHH
Confidence            347889999999999999999999999999999999999877   55677777621                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcC-C------------------CC-----
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSS-E------------------VP-----  111 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~------------------~~-----  111 (152)
                        .+..++.++|+||+||++|++++|+.||.+..      ..+....+ .... .                  .+     
T Consensus       175 ~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (288)
T cd07871         175 LLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST------VKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQ  248 (288)
T ss_pred             hcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCC
Confidence              12334678999999999999999997776542      11111111 0000 0                  00     


Q ss_pred             ---CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 ---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 ---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                         ......+.++.++|.+||.+||.+|||+.++++||||
T Consensus       249 ~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         249 PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence               0112467889999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=1e-30  Score=186.16  Aligned_cols=139  Identities=27%  Similarity=0.471  Sum_probs=113.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.++..++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        90 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  166 (316)
T cd05620          90 KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD---GHIKIADFGMCKENVFGDNRASTFCGTPDYIAPE  166 (316)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC---CCEEeCccCCCeecccCCCceeccCCCcCccCHH
Confidence            3568899999999999999999999999999999999999877   56677777622                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++|+||+||++|++++|+.||.+.      +.......+..  ..+..+..++.++.+++.+||..||++|
T Consensus       167 ~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~R  238 (316)
T cd05620         167 ILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD------DEDELFESIRV--DTPHYPRWITKESKDILEKLFERDPTRR  238 (316)
T ss_pred             HHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHHh--CCCCCCCCCCHHHHHHHHHHccCCHHHc
Confidence              1233466899999999999999999777654      44444444432  2345677889999999999999999999


Q ss_pred             cCH-HHHhcCCCCCCC
Q 039869          137 WTA-KHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~-~~~l~h~~~~~~  151 (152)
                      +++ .+++.||||+.-
T Consensus       239 ~~~~~~~~~h~~f~~~  254 (316)
T cd05620         239 LGVVGNIRGHPFFKTI  254 (316)
T ss_pred             CCChHHHHcCCCcCCC
Confidence            997 578899999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=1.1e-30  Score=186.50  Aligned_cols=138  Identities=26%  Similarity=0.367  Sum_probs=112.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||...                       
T Consensus        90 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  166 (323)
T cd05595          90 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV  166 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCC---CCEEecccHHhccccCCCCccccccCCcCcCCccc
Confidence            468999999999999999999999999999999999999877   567777877321                       


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                        +..++.++|+||+||++|++++|+.||...      +.......+...  ...+|..+++++.+++.+||..||++|+
T Consensus       167 ~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~------~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05595         167 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             ccCCCCCchhchhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHccCCHHHhC
Confidence              122356799999999999999999777654      444444443322  2346678999999999999999999998


Q ss_pred             -----CHHHHhcCCCCCCC
Q 039869          138 -----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 -----~~~~~l~h~~~~~~  151 (152)
                           ++.++++|+||.+.
T Consensus       239 ~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         239 GGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCC
Confidence                 89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.97  E-value=1.8e-30  Score=179.58  Aligned_cols=140  Identities=26%  Similarity=0.342  Sum_probs=110.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ++|...+++.++.|++.||+|||.+.|+|||||++|+|+...   +.++++|||..+                       
T Consensus       172 q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~---G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPEL  248 (419)
T KOG0663|consen  172 QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK---GILKIADFGLAREYGSPLKPYTPLVVTLWYRAPEL  248 (419)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC---CcEEecccchhhhhcCCcccCcceEEEeeecCHHH
Confidence            589999999999999999999999999999999999999877   899999998332                       


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCC------------------------
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVP------------------------  111 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------------  111 (152)
                         ...|+..+||||+|||+.|++++++.|.+.-     ..+.+......-. ...                        
T Consensus       249 LLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s-----E~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~  323 (419)
T KOG0663|consen  249 LLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS-----EIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN  323 (419)
T ss_pred             hcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc-----hHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence               2335788999999999999999997776652     2222222211111 000                        


Q ss_pred             ---CCCCC-CChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 ---EFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ---~~~~~-~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                         .++.. .++..++|+..+|.+||.+|.|+++.|+|+||.+
T Consensus       324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             hhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence               01111 5688999999999999999999999999999987

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.97  E-value=2.4e-30  Score=179.74  Aligned_cols=141  Identities=30%  Similarity=0.482  Sum_probs=109.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.++...++.+++||+.||+|||+++|+||||||+|++++..   +.++++|||..                        
T Consensus       115 ~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~---G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEv  191 (323)
T KOG0594|consen  115 QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS---GVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEV  191 (323)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC---CcEeeeccchHHHhcCCcccccccEEEeeccCHHH
Confidence            357778999999999999999999999999999999999987   78899999832                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCC--------------CCC-------
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVP--------------EFP-------  114 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~-------  114 (152)
                        ....|+..+||||+||+++||++++..|.+..     +.+.+........ ...              .++       
T Consensus       192 LlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s-----e~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~  266 (323)
T KOG0594|consen  192 LLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS-----EIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKD  266 (323)
T ss_pred             hcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccc
Confidence              22246788999999999999999997777663     2222222211111 100              000       


Q ss_pred             -----CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          115 -----SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       115 -----~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                           .....+..+++.+||.++|.+|.++..+++||||+..
T Consensus       267 l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  267 LSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             hHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence                 1223578999999999999999999999999999875

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3.5e-31  Score=184.44  Aligned_cols=142  Identities=31%  Similarity=0.431  Sum_probs=112.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      +..++...++-|+.||+.||+|||+.||+||||||+|+|+|..  .+.+|+.|||                         
T Consensus       119 ~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~--tg~LKicDFGSAK~L~~~epniSYicSRyYRaPEL  196 (364)
T KOG0658|consen  119 NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD--TGVLKICDFGSAKVLVKGEPNISYICSRYYRAPEL  196 (364)
T ss_pred             CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC--CCeEEeccCCcceeeccCCCceeEEEeccccCHHH
Confidence            4667888899999999999999999999999999999999844  3788999998                         


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCCC----------------C--------
Q 039869           57 QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSEV----------------P--------  111 (152)
Q Consensus        57 ~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------------~--------  111 (152)
                      .+....|+.+.||||.||+++||+.|++.|.|..     ..+.+...+.. +...                +        
T Consensus       197 ifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-----~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~  271 (364)
T KOG0658|consen  197 IFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-----SVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWH  271 (364)
T ss_pred             HcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-----HHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccce
Confidence            2334456889999999999999999998887753     22222222111 1100                0        


Q ss_pred             -CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 -EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 -~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       -.....+++..+|+.++|.++|.+|.++.+++.||||++
T Consensus       272 ~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde  311 (364)
T KOG0658|consen  272 KVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE  311 (364)
T ss_pred             eecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence             023457889999999999999999999999999999974

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=1.6e-30  Score=182.53  Aligned_cols=138  Identities=20%  Similarity=0.315  Sum_probs=103.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||+.+++|+||||+||+++.+   +.++++|||..                        
T Consensus        95 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  171 (287)
T cd07848          95 NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN---DVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPE  171 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC---CcEEEeeccCcccccccccccccccccccccCCcH
Confidence            468899999999999999999999999999999999999877   45666666521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-------------------CCC------
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-------------------EVP------  111 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~------  111 (152)
                        .+..++.++|+||+||++|++++|+.||.+..     .............                   ..+      
T Consensus       172 ~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07848         172 LLLGAPYGKAVDMWSVGCILGELSDGQPLFPGES-----EIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ  246 (287)
T ss_pred             HHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcc
Confidence              12334678999999999999999997775532     1111111110000                   000      


Q ss_pred             ----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 ----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 ----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                          .....++.++.+++.+||..||++||++.++++||||
T Consensus       247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                0112367889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.7e-31  Score=186.50  Aligned_cols=139  Identities=24%  Similarity=0.325  Sum_probs=112.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                        
T Consensus        87 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  163 (312)
T cd05585          87 EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQ---GHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPE  163 (312)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCC---CcEEEEECcccccCccCCCccccccCCcccCCHH
Confidence            3568999999999999999999999999999999999999877   4566666652                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..++.++|+||+||++|++++|+.||.+.      +.......+..  ....++..++.++.+++.+||..||++|
T Consensus       164 ~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dp~~R  235 (312)
T cd05585         164 LLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE------NVNEMYRKILQ--EPLRFPDGFDRDAKDLLIGLLSRDPTRR  235 (312)
T ss_pred             HHcCCCCCCccceechhHHHHHHHhCCCCcCCC------CHHHHHHHHHc--CCCCCCCcCCHHHHHHHHHHcCCCHHHc
Confidence             12233467899999999999999999777654      44444444432  3345677899999999999999999999


Q ss_pred             c---CHHHHhcCCCCCCC
Q 039869          137 W---TAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~---~~~~~l~h~~~~~~  151 (152)
                      |   ++.+++.||||.+.
T Consensus       236 ~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         236 LGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCCCHHHHHcCCCcCCC
Confidence            7   57899999999863

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=6.6e-31  Score=188.17  Aligned_cols=143  Identities=27%  Similarity=0.348  Sum_probs=112.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++.+++.+++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||...                      
T Consensus        99 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~---~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aP  175 (332)
T cd05614          99 RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE---GHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAP  175 (332)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC---CCEEEeeCcCCccccccCCCccccccCCccccCH
Confidence            3568999999999999999999999999999999999999877   566777776221                      


Q ss_pred             ----c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          + ..++.++|+||+||++|++++|..||......  .....+...+.  ...+.++..++..+.+++.+||..||+
T Consensus       176 E~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~  251 (332)
T cd05614         176 EIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER--NTQSEVSRRIL--KCDPPFPSFIGPEAQDLLHKLLRKDPK  251 (332)
T ss_pred             HHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC--CCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence                1 12356799999999999999999777543211  12223333332  233456677899999999999999999


Q ss_pred             CCc-----CHHHHhcCCCCCCC
Q 039869          135 LRW-----TAKHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~-----~~~~~l~h~~~~~~  151 (152)
                      +||     +++++++||||++.
T Consensus       252 ~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         252 KRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HcCCCCCCCHHHHHcCCCcCCC
Confidence            999     78899999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=1.3e-30  Score=182.71  Aligned_cols=141  Identities=23%  Similarity=0.359  Sum_probs=109.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||+++++||||||+||+++.+   +.++++||+..                        
T Consensus        92 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~  168 (280)
T cd05608          92 PGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDND---GNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPEL  168 (280)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEEeeCccceecCCCCccccccCCCcCccCHHH
Confidence            468999999999999999999999999999999999999876   45667776632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+|+++|++++|+.||......  .........+  .......+..++.++.+++.+||+.||++||
T Consensus       169 ~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  244 (280)
T cd05608         169 LQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--VENKELKQRI--LNDSVTYPDKFSPASKSFCEALLAKDPEKRL  244 (280)
T ss_pred             hcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc--hhHHHHHHhh--cccCCCCcccCCHHHHHHHHHHhcCCHHHhc
Confidence             1223456899999999999999999777543210  0111222222  1223345667899999999999999999999


Q ss_pred             -----CHHHHhcCCCCCC
Q 039869          138 -----TAKHVLAHPFPSV  150 (152)
Q Consensus       138 -----~~~~~l~h~~~~~  150 (152)
                           ++++++.||||++
T Consensus       245 ~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         245 GFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             CCCCCCHHHHhcChhhhc
Confidence                 7899999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.3e-30  Score=186.01  Aligned_cols=138  Identities=25%  Similarity=0.399  Sum_probs=113.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||+++++||||||+||+++.+   +.++++|||..                       
T Consensus        90 ~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE  166 (320)
T cd05590          90 SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE---GHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPE  166 (320)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC---CcEEEeeCCCCeecCcCCCcccccccCccccCHH
Confidence            3568999999999999999999999999999999999999877   56677777621                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++|+||+||++|++++|+.||.+.      +...+...+..  .....+..++.++.+++.+||..||++|
T Consensus       167 ~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~------~~~~~~~~i~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R  238 (320)
T cd05590         167 ILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE------NEDDLFEAILN--DEVVYPTWLSQDAVDILKAFMTKNPTMR  238 (320)
T ss_pred             HHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC------CHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHcccCHHHC
Confidence              1223456799999999999999999777654      44555544432  2344567789999999999999999999


Q ss_pred             cCH------HHHhcCCCCCC
Q 039869          137 WTA------KHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~------~~~l~h~~~~~  150 (152)
                      +++      ++++.||||+.
T Consensus       239 ~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         239 LGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             CCCCCCCCHHHHHcCCCcCC
Confidence            998      89999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.8e-30  Score=176.26  Aligned_cols=128  Identities=25%  Similarity=0.385  Sum_probs=112.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh--CC--CccCCCCCCCeeeecCCCchhHHHHHHH---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHS--HG--LVHCDIQGDNTLLVAGKDAHEAEISAFL---------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~--~~--i~h~dlk~~Nil~~~~~~~~~~~l~~~~---------------------   56 (152)
                      ++.++|..+++++.|++.||.++|.  .+  ++||||||+||+++.+   +.++++|||                     
T Consensus       118 kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~---gvvKLGDfGL~r~l~s~~tfA~S~VGTPyY  194 (375)
T KOG0591|consen  118 KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN---GVVKLGDFGLGRFLSSKTTFAHSLVGTPYY  194 (375)
T ss_pred             cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCC---CceeeccchhHhHhcchhHHHHhhcCCCcc
Confidence            4678999999999999999999998  45  9999999999999988   789999998                     


Q ss_pred             ----HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC-CCCChhHHHHHHHhhcc
Q 039869           57 ----QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP-SNISEDGRDFLSKCFIR  131 (152)
Q Consensus        57 ----~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~~  131 (152)
                          ...+.+|+.++||||+||++|||+.-++||++.      +-.++.++++.+..++ +| ..+|.++..++..|+..
T Consensus       195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~qgd~~~-~p~~~YS~~l~~li~~ci~v  267 (375)
T KOG0591|consen  195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIEQGDYPP-LPDEHYSTDLRELINMCIAV  267 (375)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHHcCCCCC-CcHHHhhhHHHHHHHHHccC
Confidence                223344588999999999999999999999987      7788889999876544 55 77999999999999999


Q ss_pred             ccCCCcCH
Q 039869          132 VHQLRWTA  139 (152)
Q Consensus       132 ~p~~R~~~  139 (152)
                      ||+.||+.
T Consensus       268 d~~~RP~t  275 (375)
T KOG0591|consen  268 DPEQRPDT  275 (375)
T ss_pred             CcccCCCc
Confidence            99999974

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=1.3e-30  Score=186.85  Aligned_cols=146  Identities=22%  Similarity=0.237  Sum_probs=105.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||...                      
T Consensus        97 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~  173 (338)
T cd07859          97 NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR  173 (338)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC---CcEEEccCccccccccccCccccccCCCCCCCcC
Confidence            3468999999999999999999999999999999999999877   556777776221                      


Q ss_pred             ------c--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----------CChH-----------HHHHHHHhcCCC
Q 039869           60 ------G--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----------ASRD-----------DLLELIAFSSEV  110 (152)
Q Consensus        60 ------~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----------~~~~-----------~~~~~~~~~~~~  110 (152)
                            +  ..++.++|+||+||++|++++|+.||.+......          ....           ............
T Consensus       174 aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  253 (338)
T cd07859         174 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPV  253 (338)
T ss_pred             CHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCC
Confidence                  1  2335679999999999999999977754321000          0000           000000000000


Q ss_pred             C--CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 P--EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ~--~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      +  ......+..+.+++.+||..+|++||++.++++||||++
T Consensus       254 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~  295 (338)
T cd07859         254 PFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG  295 (338)
T ss_pred             chHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence            0  011246778899999999999999999999999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=7.9e-31  Score=195.45  Aligned_cols=143  Identities=18%  Similarity=0.211  Sum_probs=103.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCc-------------hhHHHHHHHH-----------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDA-------------HEAEISAFLQ-----------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~-------------~~~~l~~~~~-----------   57 (152)
                      +++++..++.++.||+.||+|||. .||+||||||+|||++..+..             ..++++|||.           
T Consensus       226 ~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~  305 (467)
T PTZ00284        226 GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAI  305 (467)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccc
Confidence            468999999999999999999997 599999999999999765321             1366777762           


Q ss_pred             -----------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--c-----------------
Q 039869           58 -----------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--S-----------------  107 (152)
Q Consensus        58 -----------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------------  107 (152)
                                 ..+..++.++|||||||++|||++|+.||.+..      ..+....+..  +                 
T Consensus       306 ~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~  379 (467)
T PTZ00284        306 VSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD------NLEHLHLMEKTLGRLPSEWAGRCGTEEARL  379 (467)
T ss_pred             cCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHcCCCCHHHHhhccchhHHH
Confidence                       223345778999999999999999997775432      1111111000  0                 


Q ss_pred             ------CCCCCC---------------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          108 ------SEVPEF---------------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       108 ------~~~~~~---------------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                            ...+..               .......+.+||.+||.+||++||++.++++||||+..
T Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        380 LYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             HhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence                  000000               00123557899999999999999999999999999863

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=2.6e-30  Score=187.76  Aligned_cols=146  Identities=24%  Similarity=0.360  Sum_probs=107.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++.+++..++.++.||+.||+|||+.|++||||||+||+++.+   +.++++|||...                      
T Consensus        97 ~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aP  173 (372)
T cd07853          97 PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN---CVLKICDFGLARVEEPDESKHMTQEVVTQYYRAP  173 (372)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC---CCEEeccccceeecccCccccCCCCCcCCCcCCH
Confidence            4568999999999999999999999999999999999999877   567777776221                      


Q ss_pred             ----c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----------CChHHH-------HHHHHhcC-CCC-----
Q 039869           60 ----G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----------ASRDDL-------LELIAFSS-EVP-----  111 (152)
Q Consensus        60 ----~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----------~~~~~~-------~~~~~~~~-~~~-----  111 (152)
                          + ..++.++|+||+||++|++++|+.||.+......          .....+       ...+.... ..+     
T Consensus       174 E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (372)
T cd07853         174 EILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVL  253 (372)
T ss_pred             HHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHh
Confidence                1 1245678999999999999999977765421100          000000       00000001 111     


Q ss_pred             -CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 -EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 -~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       ......++++.+++.+||..||++||++.++++||||++
T Consensus       254 ~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         254 YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence             123446788999999999999999999999999999986

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.3e-30  Score=187.97  Aligned_cols=140  Identities=24%  Similarity=0.344  Sum_probs=111.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      -.|++.+++.|++|++.||.|+|.+|++|||||.+||||+.+   +.++|+|||..                        
T Consensus       213 vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~---G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPE  289 (560)
T KOG0600|consen  213 VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN---GVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPE  289 (560)
T ss_pred             cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC---CCEEeccccceeeccCCCCcccccceEEeeccChH
Confidence            369999999999999999999999999999999999999998   89999999832                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC-----C--CC---------------
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV-----P--EF---------------  113 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~---------------  113 (152)
                         ....|..++|+||+|||+.||+.|++.+.+.+     ....+........-+     +  .+               
T Consensus       290 LLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t-----EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~  364 (560)
T KOG0600|consen  290 LLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT-----EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRR  364 (560)
T ss_pred             HhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc-----HHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccch
Confidence               23335778999999999999999997777663     222222211111100     0  11               


Q ss_pred             ----CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          114 ----PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       114 ----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                          ...++....+|+..+|..||.+|.|+.++|+|+||..
T Consensus       365 l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  365 LRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             HHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence                1447888999999999999999999999999999944

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=9.9e-31  Score=187.15  Aligned_cols=138  Identities=28%  Similarity=0.401  Sum_probs=112.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        90 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~  166 (328)
T cd05593          90 RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKD---GHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEV  166 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCC---CcEEEecCcCCccCCCcccccccccCCcCccChhh
Confidence            568899999999999999999999999999999999999877   55667777621                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||...      +.......+..  ....+|..++.++.+++.+||..||++|+
T Consensus       167 ~~~~~~~~~~DiwslGvil~elltG~~Pf~~~------~~~~~~~~~~~--~~~~~p~~~~~~~~~li~~~L~~dP~~R~  238 (328)
T cd05593         167 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM--EDIKFPRTLSADAKSLLSGLLIKDPNKRL  238 (328)
T ss_pred             hcCCCCCccCCccccchHHHHHhhCCCCCCCC------CHHHHHHHhcc--CCccCCCCCCHHHHHHHHHHcCCCHHHcC
Confidence             1223467799999999999999999777654      34444444332  23456778999999999999999999997


Q ss_pred             -----CHHHHhcCCCCCCC
Q 039869          138 -----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 -----~~~~~l~h~~~~~~  151 (152)
                           ++.++++||||...
T Consensus       239 ~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         239 GGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence                 89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=2.6e-30  Score=184.25  Aligned_cols=138  Identities=24%  Similarity=0.357  Sum_probs=113.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.++..++.|++.||+|||+++++||||||+||+++.+   +.++++|||.                         
T Consensus        91 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~  167 (318)
T cd05570          91 GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE---GHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEI  167 (318)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC---CcEEecccCCCeecCcCCCcccceecCccccCHHH
Confidence            468999999999999999999999999999999999999877   5566777662                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+||++|++++|+.||.+.      +.......+..  .....+..++.++.+++.+||..||++||
T Consensus       168 ~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~------~~~~~~~~i~~--~~~~~~~~~~~~~~~li~~~l~~dP~~R~  239 (318)
T cd05570         168 LSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD------DEDELFQSILE--DEVRYPRWLSKEAKSILKSFLTKNPEKRL  239 (318)
T ss_pred             hcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC------CHHHHHHHHHc--CCCCCCCcCCHHHHHHHHHHccCCHHHcC
Confidence            22334567899999999999999999777544      44444444332  23345677899999999999999999999


Q ss_pred             CH-----HHHhcCCCCCCC
Q 039869          138 TA-----KHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~-----~~~l~h~~~~~~  151 (152)
                      ++     .+++.||||+..
T Consensus       240 s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         240 GCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence            99     999999999763

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=1.7e-30  Score=186.81  Aligned_cols=139  Identities=18%  Similarity=0.204  Sum_probs=113.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------h
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------H   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~   59 (152)
                      ++++++..++.++.|++.||.|||++|++||||||+||+++.+   +.++++|||..                      .
T Consensus       125 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~---~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~  201 (340)
T PTZ00426        125 NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKD---GFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILL  201 (340)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC---CCEEEecCCCCeecCCCcceecCChhhcCHHHHh
Confidence            4578999999999999999999999999999999999999877   56677777622                      2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc--
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW--  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~--  137 (152)
                      +..++.++|+||+||++|++++|..||.+.      +.......+...  ...+|..++..+.+++.+||..+|++|+  
T Consensus       202 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~------~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~l~~dp~~R~~~  273 (340)
T PTZ00426        202 NVGHGKAADWWTLGIFIYEILVGCPPFYAN------EPLLIYQKILEG--IIYFPKFLDNNCKHLMKKLLSHDLTKRYGN  273 (340)
T ss_pred             CCCCCccccccchhhHHHHHhcCCCCCCCC------CHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcccCHHHcCCC
Confidence            233467899999999999999999777664      444444444332  3345677899999999999999999996  


Q ss_pred             ---CHHHHhcCCCCCCC
Q 039869          138 ---TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ---~~~~~l~h~~~~~~  151 (152)
                         +++++++||||++.
T Consensus       274 ~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        274 LKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             CCCCHHHHHcCCCcCCC
Confidence               89999999999863

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=3e-30  Score=181.16  Aligned_cols=138  Identities=27%  Similarity=0.432  Sum_probs=104.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.+++.++.|++.||+|||+.|++|+||||+||+++.+   +.++++|||..                        
T Consensus       103 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (288)
T cd07863         103 PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVL  179 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---CCEEECccCccccccCcccCCCccccccccCchHh
Confidence            358999999999999999999999999999999999999877   45667776521                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-----------------CC-------CCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-----------------EV-------PEFP  114 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-------~~~~  114 (152)
                      .+..++.++|+||+||++|++++|..+|.+..     ....+........                 ..       ....
T Consensus       180 ~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (288)
T cd07863         180 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-----EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVV  254 (288)
T ss_pred             hCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC-----HHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhC
Confidence            22334678999999999999999996665432     2121111111000                 00       0112


Q ss_pred             CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          115 SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       115 ~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ..++..+.+++.+||..||++||++.+++.||||
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         255 PEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            3467788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=1.7e-30  Score=185.44  Aligned_cols=138  Identities=25%  Similarity=0.331  Sum_probs=112.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||.|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        91 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  167 (321)
T cd05591          91 RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE---GHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEI  167 (321)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC---CCEEEeecccceecccCCccccccccCccccCHHH
Confidence            568899999999999999999999999999999999999877   56677777621                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||.+.      +.......+...  ....|..++.++.+++.+||..+|++|+
T Consensus       168 ~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~------~~~~~~~~i~~~--~~~~p~~~~~~~~~ll~~~L~~dp~~R~  239 (321)
T cd05591         168 LQELEYGPSVDWWALGVLMYEMMAGQPPFEAD------NEDDLFESILHD--DVLYPVWLSKEAVSILKAFMTKNPNKRL  239 (321)
T ss_pred             HcCCCCCCccceechhHHHHHHhcCCCCCCCC------CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhccCHHHcC
Confidence             2233467899999999999999999777554      444555544432  2345667899999999999999999999


Q ss_pred             -------CHHHHhcCCCCCCC
Q 039869          138 -------TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 -------~~~~~l~h~~~~~~  151 (152)
                             ++.++++||||+..
T Consensus       240 ~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         240 GCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CCCCCCCCHHHHhcCCccCCC
Confidence                   89999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=2.5e-30  Score=184.69  Aligned_cols=137  Identities=23%  Similarity=0.297  Sum_probs=112.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        96 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  172 (324)
T cd05587          96 GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAE---GHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEI  172 (324)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCC---CCEEEeecCcceecCCCCCceeeecCCccccChhh
Confidence            468899999999999999999999999999999999999877   56777777632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||.+.      +.......+..  ....++..++.++.+++.+||..+|++|+
T Consensus       173 ~~~~~~~~~~DiwslGvil~elltG~~pf~~~------~~~~~~~~i~~--~~~~~~~~~~~~~~~li~~~l~~~P~~R~  244 (324)
T cd05587         173 IAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE------DEDELFQSIME--HNVSYPKSLSKEAVSICKGLLTKHPAKRL  244 (324)
T ss_pred             hcCCCCCcccchhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhhcCHHHcC
Confidence             1223466799999999999999999777554      44455444432  33456778999999999999999999999


Q ss_pred             CH-----HHHhcCCCCCC
Q 039869          138 TA-----KHVLAHPFPSV  150 (152)
Q Consensus       138 ~~-----~~~l~h~~~~~  150 (152)
                      +.     .++++||||+.
T Consensus       245 ~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         245 GCGPTGERDIREHAFFRR  262 (324)
T ss_pred             CCCCCCHHHHhcCCCcCC
Confidence            76     79999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=2.7e-30  Score=184.05  Aligned_cols=138  Identities=29%  Similarity=0.448  Sum_probs=113.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||+++++||||||+||+++.+   +.++++|||..                        
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~  167 (316)
T cd05592          91 GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD---GHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEI  167 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC---CCEEEccCcCCeECCCCCCccccccCCccccCHHH
Confidence            568999999999999999999999999999999999999877   56677777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||.+.      +...+...+.  ...+.++..++.++.+++.+||..+|++||
T Consensus       168 ~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~------~~~~~~~~i~--~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~  239 (316)
T cd05592         168 LKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE------DEDELFDSIL--NDRPHFPRWISKEAKDCLSKLFERDPTKRL  239 (316)
T ss_pred             HcCCCCCCcccchhHHHHHHHHHhCCCCCCCC------CHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence             2233467899999999999999999777654      4444444443  234556778999999999999999999999


Q ss_pred             CHH-HHhcCCCCCCC
Q 039869          138 TAK-HVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~-~~l~h~~~~~~  151 (152)
                      ++. +++.||||+..
T Consensus       240 ~~~~~l~~h~~~~~~  254 (316)
T cd05592         240 GVDGDIRQHPFFRGI  254 (316)
T ss_pred             CChHHHHcCcccCCC
Confidence            864 78899999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=3.4e-30  Score=183.59  Aligned_cols=138  Identities=27%  Similarity=0.435  Sum_probs=113.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.++..++.|++.||.|||+++++||||||+||+++.+   +.++++|||..                        
T Consensus        91 ~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  167 (316)
T cd05619          91 HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD---GHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEI  167 (316)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC---CCEEEccCCcceECCCCCCceeeecCCccccCHHH
Confidence            468899999999999999999999999999999999999877   55677777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||.+.      +...+...+...  .+..+..++.++.+++.+||..+|++||
T Consensus       168 ~~~~~~~~~~DvwslG~il~el~~G~~pf~~~------~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~  239 (316)
T cd05619         168 LLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH------DEEELFQSIRMD--NPCYPRWLTREAKDILVKLFVREPERRL  239 (316)
T ss_pred             HcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHhccCHhhcC
Confidence             2233467899999999999999999777654      445555554432  2445677899999999999999999999


Q ss_pred             CHH-HHhcCCCCCCC
Q 039869          138 TAK-HVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~-~~l~h~~~~~~  151 (152)
                      ++. ++++||||++.
T Consensus       240 ~~~~~l~~h~~~~~~  254 (316)
T cd05619         240 GVKGDIRQHPFFREI  254 (316)
T ss_pred             CChHHHHcCcccCCC
Confidence            996 89999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.2e-30  Score=187.28  Aligned_cols=146  Identities=21%  Similarity=0.294  Sum_probs=104.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .+++++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus       151 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~  227 (357)
T PHA03209        151 SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV---DQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEV  227 (357)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC---CCEEEecCccccccccCcccccccccccccCCee
Confidence            3568999999999999999999999999999999999999877   55667777632                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCC-----hHHHHHHHHh-cCCCCCC------------------
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS-----RDDLLELIAF-SSEVPEF------------------  113 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~------------------  113 (152)
                       .+..++.++|+||+||++|+++++..+++.........     ...+...+.. +.....+                  
T Consensus       228 ~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (357)
T PHA03209        228 LARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASL  307 (357)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhccc
Confidence             12234678999999999999998765665432211000     0111111110 0000001                  


Q ss_pred             ------------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          114 ------------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       114 ------------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                  ...++.++.++|.+||..||.+|||+.+++.||||++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        308 ERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                        1235667788999999999999999999999999985

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=4.7e-30  Score=183.34  Aligned_cols=137  Identities=23%  Similarity=0.299  Sum_probs=112.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||+|||+.|++||||||+||+++.+   +.++++|||..                        
T Consensus        96 ~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~  172 (324)
T cd05589          96 DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTE---GFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEV  172 (324)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC---CcEEeCcccCCccCCCCCCcccccccCccccCHhH
Confidence            568999999999999999999999999999999999999887   56777777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||.+.      +.......+...  .+..+..++.++.+++.+||..||++||
T Consensus       173 ~~~~~~~~~~DiwslG~il~el~~G~~pf~~~------~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~  244 (324)
T cd05589         173 LTETSYTRAVDWWGLGVLIYEMLVGESPFPGD------DEEEVFDSIVND--EVRYPRFLSREAISIMRRLLRRNPERRL  244 (324)
T ss_pred             hcCCCCCcccchhhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHhhcCHhHcC
Confidence             1223466799999999999999999777654      444444444332  2346677899999999999999999999


Q ss_pred             -----CHHHHhcCCCCCC
Q 039869          138 -----TAKHVLAHPFPSV  150 (152)
Q Consensus       138 -----~~~~~l~h~~~~~  150 (152)
                           ++.++++||||++
T Consensus       245 ~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         245 GSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             CCCCCCHHHHhhCCCcCC
Confidence                 6899999999986

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.5e-30  Score=188.96  Aligned_cols=146  Identities=19%  Similarity=0.202  Sum_probs=105.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus       176 ~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~---~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aP  252 (391)
T PHA03212        176 KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHP---GDVCLGDFGAACFPVDINANKYYGWAGTIATNAP  252 (391)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCC---CCEEEEeCCcccccccccccccccccCccCCCCh
Confidence            3568899999999999999999999999999999999999877   45667777632                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC-C-hHHHHH-------------------------HHHhcC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA-S-RDDLLE-------------------------LIAFSS  108 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~-~-~~~~~~-------------------------~~~~~~  108 (152)
                         .+..++.++|+||+||++|++++|+.|++.....+.. . ...+..                         ......
T Consensus       253 E~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  332 (391)
T PHA03212        253 ELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKS  332 (391)
T ss_pred             hhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhcc
Confidence               1223467899999999999999999777654321100 0 000000                         000000


Q ss_pred             C-CC-CCC-----CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          109 E-VP-EFP-----SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       109 ~-~~-~~~-----~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      . .+ ..+     ...+.++.+++.+||..||++|||+.++++||||+.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        333 SRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             CCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence            0 00 000     124667899999999999999999999999999986

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=5.1e-30  Score=185.07  Aligned_cols=141  Identities=28%  Similarity=0.413  Sum_probs=109.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-------------c----------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-------------G----------   60 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-------------~----------   60 (152)
                      ..++..+..++.||+.||+|||++|++||||||+||+++.+   +.++++|||...             |          
T Consensus       164 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~  240 (353)
T PLN00034        164 IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSA---KNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERI  240 (353)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC---CCEEEcccccceecccccccccccccCccccCcccc
Confidence            35678889999999999999999999999999999999877   566777776221             0          


Q ss_pred             -------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           61 -------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        61 -------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                             ...+.++|||||||++|++++|+.||....   ..........+. ....+..+..++.++.++|.+||..+|
T Consensus       241 ~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P  316 (353)
T PLN00034        241 NTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR---QGDWASLMCAIC-MSQPPEAPATASREFRHFISCCLQREP  316 (353)
T ss_pred             ccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC---CccHHHHHHHHh-ccCCCCCCCccCHHHHHHHHHHccCCh
Confidence                   011247999999999999999997775321   112223332222 223445567789999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~~  151 (152)
                      ++||++.++++||||...
T Consensus       317 ~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        317 AKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             hhCcCHHHHhcCcccccC
Confidence            999999999999999864

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=5.4e-30  Score=187.30  Aligned_cols=145  Identities=20%  Similarity=0.301  Sum_probs=108.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .+++++.+++.++.|++.||.|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus       179 ~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~---~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~a  255 (392)
T PHA03207        179 SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEP---ENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNS  255 (392)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC---CCEEEccCccccccCcccccccccccccccCccC
Confidence            3568999999999999999999999999999999999999877   55667777622                       


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH----------------------hc--CCC
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA----------------------FS--SEV  110 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~--~~~  110 (152)
                          .+..++.++|+||+||++|++++|+.||++.....  ....+...+.                      ..  ...
T Consensus       256 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (392)
T PHA03207        256 PELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS--SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLR  333 (392)
T ss_pred             HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC--cHHHHHHHHHHhccCccccCCccchhHHHHHHhhccccc
Confidence                12234678999999999999999998887754321  1111111000                      00  000


Q ss_pred             C--CC-----CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          111 P--EF-----PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       111 ~--~~-----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      +  ..     ...++.++.++|.+||..||++||++.+++.||||++.
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        334 PPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             CCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence            0  01     12356778999999999999999999999999999864

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.5e-30  Score=185.28  Aligned_cols=141  Identities=22%  Similarity=0.339  Sum_probs=111.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------h
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------H   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~   59 (152)
                      .+++++.+++.++.|++.||.|||++|++||||||+||+++.+   +.++++|||..                      .
T Consensus        95 ~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~  171 (333)
T cd05600          95 LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDAS---GHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLR  171 (333)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC---CCEEEEeCcCCcccccccCCcccCccccChhHhc
Confidence            3568999999999999999999999999999999999999877   56677777622                      2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC------CCCChhHHHHHHHhhcccc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP------SNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~l~~~p  133 (152)
                      +..++.++|+||+||++|++++|..||.+.      +..+....+.........+      ..++.++.+++.+||..+|
T Consensus       172 ~~~~~~~~DvwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~  245 (333)
T cd05600         172 GKGYDFTVDYWSLGCMLYEFLCGFPPFSGS------TPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPS  245 (333)
T ss_pred             CCCCCCccceecchHHHhhhhhCCCCCCCC------CHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChh
Confidence            334577899999999999999999777554      4444443333222111111      2468999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~~  151 (152)
                      ++||++.++++||||...
T Consensus       246 ~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         246 RRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             hhcCCHHHHHhCcccCCC
Confidence            999999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.7e-30  Score=190.44  Aligned_cols=137  Identities=21%  Similarity=0.375  Sum_probs=122.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------H
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------Q   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------~   57 (152)
                      +.|++..++.|+..|+.||+|||++||||||||.+|||+|..   +.++|+|||                         .
T Consensus       463 ~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~e---Gh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEi  539 (694)
T KOG0694|consen  463 DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTE---GHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEV  539 (694)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEccc---CcEEecccccccccCCCCCccccccCChhhcChhh
Confidence            579999999999999999999999999999999999999999   888999998                         3


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..|+.++|=|||||++|||+.|..||.+.      +.+++...+.  ...+.+|..++.+..++++++|..+|++|.
T Consensus       540 l~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd------dEee~FdsI~--~d~~~yP~~ls~ea~~il~~ll~k~p~kRL  611 (694)
T KOG0694|consen  540 LTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD------DEEEVFDSIV--NDEVRYPRFLSKEAIAIMRRLLRKNPEKRL  611 (694)
T ss_pred             hccCcccchhhHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHh--cCCCCCCCcccHHHHHHHHHHhccCccccc
Confidence            44566789999999999999999999999887      6777777665  344567899999999999999999999998


Q ss_pred             CH-----HHHhcCCCCCC
Q 039869          138 TA-----KHVLAHPFPSV  150 (152)
Q Consensus       138 ~~-----~~~l~h~~~~~  150 (152)
                      ..     .++..||||+.
T Consensus       612 G~~e~d~~~i~~hpFFr~  629 (694)
T KOG0694|consen  612 GSGERDAEDIKKHPFFRS  629 (694)
T ss_pred             CCCCCCchhhhhCCcccc
Confidence            64     68999999986

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-30  Score=184.42  Aligned_cols=138  Identities=21%  Similarity=0.319  Sum_probs=110.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------Hh--------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------QR--------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------~~--------   58 (152)
                      .|+|..|+.|.+++++||.|||.+|.||||||+.||||+.+   +.++++||+                 .+        
T Consensus       122 Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~d---G~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmA  198 (516)
T KOG0582|consen  122 GLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSD---GTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMA  198 (516)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCC---CcEEEcCceeeeeecccCceeeEeeccccCcccccC
Confidence            58999999999999999999999999999999999999998   788888885                 11        


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC-C-------CCCCCCChhHHHH
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV-P-------EFPSNISEDGRDF  124 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~l  124 (152)
                            ....|+.|+||||||+...|+++|..||-..      .+..+....-....+ +       +....++.+++.+
T Consensus       199 PEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~------pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~  272 (516)
T KOG0582|consen  199 PEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY------PPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREM  272 (516)
T ss_pred             hHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC------ChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHH
Confidence                  2233578999999999999999999666444      334333332222211 1       1124477889999


Q ss_pred             HHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          125 LSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      +..||..||++|||++++|+|+||+.
T Consensus       273 i~~CL~kDP~kRptAskLlkh~FFk~  298 (516)
T KOG0582|consen  273 IALCLVKDPSKRPTASKLLKHAFFKK  298 (516)
T ss_pred             HHHHhhcCcccCCCHHHHhccHHHhh
Confidence            99999999999999999999999975

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=5.7e-30  Score=183.17  Aligned_cols=144  Identities=22%  Similarity=0.282  Sum_probs=112.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        91 ~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  167 (327)
T cd05617          91 RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD---GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEI  167 (327)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC---CCEEEeccccceeccCCCCceecccCCcccCCHHH
Confidence            568999999999999999999999999999999999999877   55677777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChH-HHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD-DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+||++|++++|..||............ .......  ......|..++..+.+++.+||+.||++|
T Consensus       168 ~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~li~~~L~~dP~~R  245 (327)
T cd05617         168 LRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL--EKPIRIPRFLSVKASHVLKGFLNKDPKER  245 (327)
T ss_pred             HCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH--hCCCCCCCCCCHHHHHHHHHHhccCHHHc
Confidence             2233467899999999999999999777543222111222 2223332  22345677889999999999999999999


Q ss_pred             cC------HHHHhcCCCCCCC
Q 039869          137 WT------AKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~------~~~~l~h~~~~~~  151 (152)
                      ++      +.+++.||||+..
T Consensus       246 ~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         246 LGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             CCCCCCCCHHHHHcCCCCCCC
Confidence            97      5699999999863

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-30  Score=174.51  Aligned_cols=142  Identities=26%  Similarity=0.418  Sum_probs=117.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------   58 (152)
                      .++++|..+-++...+++||.||.+ ++|+|||+||+|||+|..   +.+++.|||..                      
T Consensus       185 k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~---GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPE  261 (391)
T KOG0983|consen  185 KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER---GNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPE  261 (391)
T ss_pred             cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC---CCEEeecccccceeecccccccccCCccccCcc
Confidence            4689999999999999999999995 599999999999999988   67777788721                      


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCC--CCChhHHHHHHHhhcc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS--NISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~l~~  131 (152)
                           ....|+.++||||||+.++|++||+.|+.+..     ..-+...++.. ..+|.++.  .+++.+.+|+..||..
T Consensus       262 Ridp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~-----tdFe~ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~k  335 (391)
T KOG0983|consen  262 RIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK-----TDFEVLTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTK  335 (391)
T ss_pred             ccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC-----ccHHHHHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhc
Confidence                 13335778999999999999999999998864     33455555544 44455543  3899999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSVDE  152 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~~~  152 (152)
                      |+.+||...++++|||+...|
T Consensus       336 d~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  336 DHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             CcccCcchHHHhcCcceeecc
Confidence            999999999999999998765

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.97  E-value=5.7e-30  Score=179.44  Aligned_cols=142  Identities=20%  Similarity=0.249  Sum_probs=111.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..+..++.|++.||+|||+.+++|+||||+||+++.+   +.++++||+..                       
T Consensus        91 ~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~  167 (279)
T cd05633          91 HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL  167 (279)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC---CCEEEccCCcceeccccCccCcCCCcCccCHHHh
Confidence            3568999999999999999999999999999999999999877   45666666521                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|..||......   ....+....  ......++..++.++.+++.+||..||++|+
T Consensus       168 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  242 (279)
T cd05633         168 QKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---DKHEIDRMT--LTVNVELPDSFSPELKSLLEGLLQRDVSKRL  242 (279)
T ss_pred             cCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc---CHHHHHHHh--hcCCcCCccccCHHHHHHHHHHhcCCHHHhc
Confidence             1233567899999999999999999877654321   222222211  2233456677899999999999999999999


Q ss_pred             -----CHHHHhcCCCCCCC
Q 039869          138 -----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 -----~~~~~l~h~~~~~~  151 (152)
                           ++.++++||||++.
T Consensus       243 ~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         243 GCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             CCCCCCHHHHHhCccccCC
Confidence                 69999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.96  E-value=3.4e-30  Score=183.29  Aligned_cols=145  Identities=19%  Similarity=0.263  Sum_probs=101.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC-CCchhHHHHHHHHh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-KDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~-~~~~~~~l~~~~~~------------------------   58 (152)
                      .+++..++.++.||+.||+|||++|++||||||+||++..+ ...+.++++|||..                        
T Consensus       104 ~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07868         104 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccC
Confidence            58899999999999999999999999999999999999532 23356777787622                        


Q ss_pred             ----hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC----ChHHHHHHHHhcC---------------------
Q 039869           59 ----HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA----SRDDLLELIAFSS---------------------  108 (152)
Q Consensus        59 ----~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---------------------  108 (152)
                          .+ ..++.++|+||+||++|++++|+.||.........    ....+........                     
T Consensus       184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T cd07868         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK  263 (317)
T ss_pred             CHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhh
Confidence                11 22456799999999999999999777543221000    0011110000000                     


Q ss_pred             ----CCC----------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          109 ----EVP----------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       109 ----~~~----------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                          ...          ......+.++.+++.+||..||++|||++++++||||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         264 DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                000          0011234568899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=5.5e-30  Score=182.88  Aligned_cols=137  Identities=22%  Similarity=0.295  Sum_probs=112.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.++..++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        96 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~  172 (323)
T cd05616          96 GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEI  172 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCC---CcEEEccCCCceecCCCCCccccCCCChhhcCHHH
Confidence            568899999999999999999999999999999999999877   56677777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||.+.      +...+...+...  ...+|..++.++.+++.+||..+|++|+
T Consensus       173 ~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~------~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~l~~~p~~R~  244 (323)
T cd05616         173 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELFQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPGKRL  244 (323)
T ss_pred             hcCCCCCCccchhchhHHHHHHHhCCCCCCCC------CHHHHHHHHHhC--CCCCCCcCCHHHHHHHHHHcccCHHhcC
Confidence             2233467899999999999999999777654      445555554432  3346678999999999999999999999


Q ss_pred             CH-----HHHhcCCCCCC
Q 039869          138 TA-----KHVLAHPFPSV  150 (152)
Q Consensus       138 ~~-----~~~l~h~~~~~  150 (152)
                      +.     .++++||||+.
T Consensus       245 ~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         245 GCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             CCCCCCHHHHhcCCCcCC
Confidence            74     78999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.96  E-value=1.5e-30  Score=185.92  Aligned_cols=139  Identities=27%  Similarity=0.382  Sum_probs=113.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------   58 (152)
                      ++.+++..++.++.||+.||+|||+ .|++||||||+||+++.+   +.++++|||..                      
T Consensus        89 ~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (325)
T cd05594          89 ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD---GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP  165 (325)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCC---CCEEEecCCCCeecCCCCcccccccCCcccCCH
Confidence            3568999999999999999999997 799999999999999877   56677777621                      


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         .+..++.++|+||+||++|++++|..||.+.      +.......+..  ....++..+++++.+++.+||..||++
T Consensus       166 E~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~------~~~~~~~~i~~--~~~~~p~~~~~~~~~li~~~L~~dP~~  237 (325)
T cd05594         166 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILM--EEIRFPRTLSPEAKSLLSGLLKKDPKQ  237 (325)
T ss_pred             HHHccCCCCCccccccccceeeeeccCCCCCCCC------CHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence               1233467899999999999999999777654      44444444432  233466788999999999999999999


Q ss_pred             Cc-----CHHHHhcCCCCCCC
Q 039869          136 RW-----TAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~-----~~~~~l~h~~~~~~  151 (152)
                      |+     ++.++++||||++.
T Consensus       238 R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         238 RLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             hCCCCCCCHHHHhcCCCcCCC
Confidence            97     89999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.6e-30  Score=176.86  Aligned_cols=137  Identities=30%  Similarity=0.436  Sum_probs=110.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.|++.||++||+.|++|+||+|+||+++.+   +.++++||+...                       
T Consensus        99 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  175 (263)
T cd06625          99 GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMS  175 (263)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEeecccceeccccccccccccCCCcCccccC
Confidence            457889999999999999999999999999999999999877   456666665211                       


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                           +..++.++|+||+|+++|++++|+.|+...      +..............+..+..++..+.+++.+||..+|+
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  249 (263)
T cd06625         176 PEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF------EAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAK  249 (263)
T ss_pred             cceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc------chHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcc
Confidence                 111356799999999999999999776543      333333334444445567788999999999999999999


Q ss_pred             CCcCHHHHhcCCCC
Q 039869          135 LRWTAKHVLAHPFP  148 (152)
Q Consensus       135 ~R~~~~~~l~h~~~  148 (152)
                      +||++.++++|+||
T Consensus       250 ~Rpt~~~ll~~~~~  263 (263)
T cd06625         250 KRPSAEELLRHFFV  263 (263)
T ss_pred             cCCCHHHHhhCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=4e-30  Score=183.65  Aligned_cols=138  Identities=25%  Similarity=0.331  Sum_probs=112.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        94 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  170 (323)
T cd05584          94 EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQ---GHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPE  170 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC---CCEEEeeCcCCeecccCCCcccccCCCccccChh
Confidence            3567889999999999999999999999999999999999877   56777777622                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++|+||+||++|++++|+.||.+.      +.......+...  ...++..++.++.+++.+||..+|++|
T Consensus       171 ~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R  242 (323)
T cd05584         171 ILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE------NRKKTIDKILKG--KLNLPPYLTPEARDLLKKLLKRNPSSR  242 (323)
T ss_pred             hccCCCCCCcceecccHHHHHHHhcCCCCCCCC------CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHcccCHhHc
Confidence              1222356799999999999999999777654      334444444322  345677889999999999999999999


Q ss_pred             c-----CHHHHhcCCCCCC
Q 039869          137 W-----TAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~-----~~~~~l~h~~~~~  150 (152)
                      |     ++.+++.||||+.
T Consensus       243 ~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         243 LGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             CCCCCCCHHHHhcCCCcCC
Confidence            9     8999999999975

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=7.3e-30  Score=182.73  Aligned_cols=144  Identities=24%  Similarity=0.328  Sum_probs=110.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        90 ~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  166 (329)
T cd05588          90 QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE---GHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPE  166 (329)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC---CCEEECcCccccccccCCCccccccCCccccCHH
Confidence            3578999999999999999999999999999999999999877   55667776622                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC--CChHH-HHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL--ASRDD-LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                        .+..++.++|+||+||++|++++|+.||........  ..... ..+.+.  .....+|..++.++.+++.+||+.||
T Consensus       167 ~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~li~~~L~~dP  244 (329)
T cd05588         167 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL--EKQIRIPRSLSVKASSVLKGFLNKDP  244 (329)
T ss_pred             HHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhccCH
Confidence              122345689999999999999999977753221110  11112 222222  22345677899999999999999999


Q ss_pred             CCCcC------HHHHhcCCCCCC
Q 039869          134 QLRWT------AKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~------~~~~l~h~~~~~  150 (152)
                      .+|++      +.++++||||..
T Consensus       245 ~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         245 KERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHcCCCCCCCCHHHHhcCCCCCC
Confidence            99987      789999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.96  E-value=6.3e-30  Score=184.92  Aligned_cols=144  Identities=22%  Similarity=0.367  Sum_probs=104.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      .+++..+..++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        .
T Consensus       119 ~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~  195 (359)
T cd07876         119 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL  195 (359)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC---CCEEEecCCCccccccCccCCCCcccCCCCCchhcc
Confidence            47888999999999999999999999999999999999877   56677777622                        2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---------CChHHH-------HH-HHHhcCCCC-----------
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---------ASRDDL-------LE-LIAFSSEVP-----------  111 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---------~~~~~~-------~~-~~~~~~~~~-----------  111 (152)
                      +..++.++|+||+||++|++++|+.||.+....+.         ......       .. ........+           
T Consensus       196 ~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
T cd07876         196 GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDW  275 (359)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccc
Confidence            23346789999999999999999977765421000         000000       00 000000000           


Q ss_pred             ------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 ------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                            ......++++.+++.+||..||++||++.+++.||||+.
T Consensus       276 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         276 IFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             ccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                  011224577899999999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=7.7e-30  Score=183.40  Aligned_cols=140  Identities=24%  Similarity=0.359  Sum_probs=105.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------c
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------G   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------~   60 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||...                      +
T Consensus       113 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (343)
T cd07878         113 QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED---CELRILDFGLARQADDEMTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC---CCEEEcCCccceecCCCcCCccccccccCchHhcC
Confidence            468999999999999999999999999999999999999877   566777776211                      1


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc--------------------CCCCC-------
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS--------------------SEVPE-------  112 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~-------  112 (152)
                       ..++.++|+||+||++|++++|..||.+...     ...+.......                    ...+.       
T Consensus       190 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (343)
T cd07878         190 WMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-----IDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLK  264 (343)
T ss_pred             CccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHH
Confidence             2346689999999999999999977754321     11111100000                    00000       


Q ss_pred             -CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 -FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 -~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       .....++.+.+++.+||..||++||++.+++.||||.+
T Consensus       265 ~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         265 KIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             HhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence             11235667899999999999999999999999999975

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.96  E-value=8.1e-30  Score=186.55  Aligned_cols=138  Identities=25%  Similarity=0.331  Sum_probs=119.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      ++.++|++++.++.+++.||.|||+++|+|||+||.||+++.+   +.+++.+|+                         
T Consensus        94 d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~---~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPE  170 (808)
T KOG0597|consen   94 DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKG---GTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPE  170 (808)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCC---CceeechhhhhhhcccCceeeeeccCcccccCHH
Confidence            4679999999999999999999999999999999999999988   778888887                         


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           57 QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        57 ~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ...+.+|+..+|+||+||++||+..|++||+..      ....+.+.+..  .....|...+..+.+|++.+|..||.+|
T Consensus       171 lv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~--d~v~~p~~~S~~f~nfl~gLL~kdP~~R  242 (808)
T KOG0597|consen  171 LVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILK--DPVKPPSTASSSFVNFLQGLLIKDPAQR  242 (808)
T ss_pred             HHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhc--CCCCCcccccHHHHHHHHHHhhcChhhc
Confidence            344666789999999999999999999888765      55555555543  3344566899999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      .+-.+++.|||.++
T Consensus       243 ltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  243 LTWTDLLGHPFWKG  256 (808)
T ss_pred             ccHHHHhcChHHhh
Confidence            99999999999764

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.96  E-value=9.7e-30  Score=183.68  Aligned_cols=139  Identities=24%  Similarity=0.346  Sum_probs=103.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      .+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        .
T Consensus       115 ~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~  191 (355)
T cd07874         115 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL  191 (355)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCC---CCEEEeeCcccccCCCccccCCccccCCccCHHHHc
Confidence            47888999999999999999999999999999999999877   56677777622                        2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH----------------------HHhcCC--------
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL----------------------IAFSSE--------  109 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~--------  109 (152)
                      +..++.++|+||+||++|++++|+.||.+...     .......                      ......        
T Consensus       192 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (355)
T cd07874         192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-----IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK  266 (355)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchh
Confidence            33346789999999999999999977755321     1111000                      000000        


Q ss_pred             ---------CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          110 ---------VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       110 ---------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                               ....+...+.++.+++.+||..||++|||+.++++||||+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             hccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence                     00011224567899999999999999999999999999963

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=1e-29  Score=180.40  Aligned_cols=140  Identities=22%  Similarity=0.356  Sum_probs=105.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        99 ~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  175 (309)
T cd07872          99 NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDV  175 (309)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC---CCEEECccccceecCCCccccccccccccccCCHH
Confidence            357889999999999999999999999999999999999877   55677777621                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH-----------------------hcCCCC--
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA-----------------------FSSEVP--  111 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~--  111 (152)
                        .+..++.++|+||+||++|++++|+.||.+...     .+.......                       .....+  
T Consensus       176 ~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
T cd07872         176 LLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV-----EDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQP  250 (309)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCc
Confidence              112246679999999999999999977755421     111111100                       000000  


Q ss_pred             --CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 --EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 --~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        .....++.++.+++.+||..||.+|||+.++++||||+.
T Consensus       251 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         251 LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence              011346788999999999999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=1.5e-29  Score=177.36  Aligned_cols=140  Identities=29%  Similarity=0.455  Sum_probs=109.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..+..++.|++.||.|||+.|++|+||||+||+++.+   +.++++||+..                       
T Consensus        97 ~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  173 (282)
T cd06643          97 ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE  173 (282)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccC---CCEEEccccccccccccccccccccccccccCHh
Confidence            3568999999999999999999999999999999999999877   45666666521                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc-CCCCCCCCCCChhHHHHHHHhhc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS-SEVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                             .+..++.++|+||+||++|++++|+.|+...      ...+........ ......+..++.++.+++.+||+
T Consensus       174 ~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  247 (282)
T cd06643         174 VVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL------NPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLE  247 (282)
T ss_pred             hccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc------CHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHcc
Confidence                   1222345799999999999999999665443      333333222222 22233456688999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .+|++||++.++++||||+.
T Consensus       248 ~~p~~Rp~~~~il~~~~~~~  267 (282)
T cd06643         248 KNVDARWTTTQLLQHPFVTV  267 (282)
T ss_pred             CChhhCcCHHHHhcCCCEec
Confidence            99999999999999999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.96  E-value=3.4e-29  Score=173.08  Aligned_cols=136  Identities=21%  Similarity=0.337  Sum_probs=109.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.++..++.|++.||++||++|++|+||+|+||+++..   +.++++||+..                        
T Consensus        97 ~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~  173 (257)
T cd08223          97 KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRT---NIIKVGDLGIARVLENQCDMASTLIGTPYYMSPEL  173 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecC---CcEEEecccceEEecccCCccccccCCcCccChhH
Confidence            458999999999999999999999999999999999999876   55666666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+|++++++++|+.|+...      +..........+ ..+..+..++..+.+++.+|++.+|++||
T Consensus       174 ~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  246 (257)
T cd08223         174 FSNKPYNYKSDVWALGCCVYEMATLKHAFNAK------DMNSLVYRIIEG-KLPPMPKDYSPELGELIATMLSKRPEKRP  246 (257)
T ss_pred             hcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHhc-CCCCCccccCHHHHHHHHHHhccCcccCC
Confidence             1222356799999999999999999776543      333433333322 23455677899999999999999999999


Q ss_pred             CHHHHhcCCCC
Q 039869          138 TAKHVLAHPFP  148 (152)
Q Consensus       138 ~~~~~l~h~~~  148 (152)
                      ++.+++.||||
T Consensus       247 ~~~~~l~~~~~  257 (257)
T cd08223         247 SVKSILRQPYI  257 (257)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=1.5e-29  Score=181.16  Aligned_cols=145  Identities=23%  Similarity=0.405  Sum_probs=106.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.+++..+..++.|++.||.|||+. +++||||||+||+++.+   +.++++|||..                       
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~  174 (331)
T cd06649          98 KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL  174 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCC---CcEEEccCcccccccccccccCCCCcCcCCHhHh
Confidence            4688999999999999999999985 69999999999999877   55677777621                       


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----------------------------------------CChH
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----------------------------------------ASRD   98 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----------------------------------------~~~~   98 (152)
                      .+..++.++|+||+||++|++++|+.||........                                        ....
T Consensus       175 ~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T cd06649         175 QGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIF  254 (331)
T ss_pred             cCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHH
Confidence            223356789999999999999999977754321000                                        0000


Q ss_pred             HHHHHHHhcCCCCCC-CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869           99 DLLELIAFSSEVPEF-PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .....+. ....+.. ...++.++.+|+.+||..||++||++.++++||||+..
T Consensus       255 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         255 ELLDYIV-NEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             HHHHHHH-hCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence            1111111 1111222 22478899999999999999999999999999999865

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.96  E-value=1.1e-29  Score=183.92  Aligned_cols=138  Identities=24%  Similarity=0.367  Sum_probs=103.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      .+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        .
T Consensus       122 ~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~  198 (364)
T cd07875         122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL  198 (364)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC---CcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHh
Confidence            46788999999999999999999999999999999999877   56677777622                        2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc--------------------CCCC--------
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS--------------------SEVP--------  111 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~--------  111 (152)
                      +..++.++|+||+||++|++++|+.||.+..      .......+...                    ...+        
T Consensus       199 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (364)
T cd07875         199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTD------HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE  272 (364)
T ss_pred             CCCCCchhhHHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChH
Confidence            3334678999999999999999997775542      11111111000                    0000        


Q ss_pred             ------------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 ------------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                  ......+..+.++|.+||..||++|||+.++++||||+.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             hhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                        011123457899999999999999999999999999963

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=5.9e-30  Score=182.74  Aligned_cols=138  Identities=22%  Similarity=0.286  Sum_probs=111.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        90 ~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  166 (323)
T cd05575          90 ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ---GHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPE  166 (323)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC---CcEEEeccCCCcccccCCCccccccCChhhcChh
Confidence            3568899999999999999999999999999999999999877   56677777621                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++|+|||||++|++++|..||.+.      +..+....+...  ....+..++.++.+++.+||..+|++|
T Consensus       167 ~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R  238 (323)
T cd05575         167 VLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------DTAEMYDNILNK--PLRLKPNISVSARHLLEGLLQKDRTKR  238 (323)
T ss_pred             hhcCCCCCccccccccchhhhhhhcCCCCCCCC------CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHhC
Confidence              2233467899999999999999999777654      444444444322  234556789999999999999999999


Q ss_pred             cCH----HHHhcCCCCCC
Q 039869          137 WTA----KHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~----~~~l~h~~~~~  150 (152)
                      |++    .++++||||..
T Consensus       239 ~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         239 LGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             CCCCCCHHHHHcCCCcCC
Confidence            987    69999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=6e-30  Score=185.83  Aligned_cols=140  Identities=25%  Similarity=0.375  Sum_probs=111.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh--------------c--------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH--------------G--------   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~--------------~--------   60 (152)
                      ..+++..+..++.|++.||+|||+.|++||||||+||+++.+   +.++++|||...              |        
T Consensus       137 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~---~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE  213 (370)
T cd05596         137 YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPE  213 (370)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCC---CCEEEEeccceeeccCCCcccCCCCCCCcCeECHH
Confidence            457899999999999999999999999999999999999877   567777776221              0        


Q ss_pred             --------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCC--CCChhHHHHHHHhhc
Q 039869           61 --------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS--NISEDGRDFLSKCFI  130 (152)
Q Consensus        61 --------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~l~  130 (152)
                              ..++.++|+||+||++|++++|+.||.+.      +.......+.........+.  .++.++.+++.+||.
T Consensus       214 ~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  287 (370)
T cd05596         214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLT  287 (370)
T ss_pred             HhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC------CHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHcc
Confidence                    11356799999999999999999887665      33444444433333333333  578999999999999


Q ss_pred             cccCC--CcCHHHHhcCCCCCCC
Q 039869          131 RVHQL--RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~--R~~~~~~l~h~~~~~~  151 (152)
                      .+|++  |+++.+++.||||+++
T Consensus       288 ~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         288 DREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             ChhhccCCCCHHHHhcCcccCCC
Confidence            99987  9999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=8.6e-30  Score=182.39  Aligned_cols=144  Identities=23%  Similarity=0.306  Sum_probs=110.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        91 ~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~  167 (329)
T cd05618          91 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI  167 (329)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC---CCEEEeeCCccccccCCCCccccccCCccccCHHH
Confidence            568999999999999999999999999999999999999877   56677777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC--CC-hHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL--AS-RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                       .+..++.++|+||+||++|++++|+.||........  .. ...+...+.  .....+|..++..+.+++.+||..||+
T Consensus       168 ~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~ll~~~L~~dP~  245 (329)
T cd05618         168 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--EKQIRIPRSLSVKAASVLKSFLNKDPK  245 (329)
T ss_pred             HcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHhcCCHH
Confidence             122346689999999999999999977743211111  11 112222222  233456778999999999999999999


Q ss_pred             CCcC------HHHHhcCCCCCCC
Q 039869          135 LRWT------AKHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~~------~~~~l~h~~~~~~  151 (152)
                      +|++      +.+++.||||++-
T Consensus       246 ~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         246 ERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             HcCCCCCCCCHHHHhcCCCCCCC
Confidence            9998      5799999999863

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=1.5e-29  Score=183.25  Aligned_cols=140  Identities=23%  Similarity=0.279  Sum_probs=107.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus        95 ~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~---~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~  171 (363)
T cd05628          95 KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK---GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDF  171 (363)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC---CCEEEeeccCcccccccccccccccccccccccc
Confidence            4578999999999999999999999999999999999999877   45666776632                       


Q ss_pred             -------------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH
Q 039869           59 -------------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL  101 (152)
Q Consensus        59 -------------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~  101 (152)
                                                           .+..++.++|+||+||++|+|++|+.||.+.      ...+..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~------~~~~~~  245 (363)
T cd05628         172 TFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE------TPQETY  245 (363)
T ss_pred             cccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC------CHHHHH
Confidence                                                 1223467899999999999999999777665      444555


Q ss_pred             HHHHhcCCCCCCCC--CCChhHHHHHHHhhccccC---CCcCHHHHhcCCCCCCC
Q 039869          102 ELIAFSSEVPEFPS--NISEDGRDFLSKCFIRVHQ---LRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       102 ~~~~~~~~~~~~~~--~~~~~~~~ll~~~l~~~p~---~R~~~~~~l~h~~~~~~  151 (152)
                      ..+........+|.  .+++++.+++.+++. +|.   .||++.++++||||++.
T Consensus       246 ~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         246 KKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             HHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            54443332233332  468899999998664 444   45899999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=1.8e-29  Score=175.90  Aligned_cols=137  Identities=28%  Similarity=0.432  Sum_probs=106.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.|++.||+|||+++++|+||+|+||+++.+   ..++++||+...                       
T Consensus       106 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~  182 (272)
T cd06637         106 NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV  182 (272)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC---CCEEEccCCCceecccccccCCcccccccccCHhH
Confidence            358899999999999999999999999999999999999877   456666665210                       


Q ss_pred             -------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           60 -------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        60 -------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                             +..++.++|+||+||++|++++|..|+...      ..................+..++.++.+++.+||..+
T Consensus       183 ~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  256 (272)
T cd06637         183 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM------HPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKN  256 (272)
T ss_pred             hccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc------CHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCC
Confidence                   123456799999999999999999776543      2222222222222222334567889999999999999


Q ss_pred             cCCCcCHHHHhcCCCC
Q 039869          133 HQLRWTAKHVLAHPFP  148 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~  148 (152)
                      |++||++.+++.||||
T Consensus       257 p~~Rpt~~~il~~~~~  272 (272)
T cd06637         257 HSQRPTTEQLMKHPFI  272 (272)
T ss_pred             hhhCCCHHHHhhCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=1.1e-29  Score=190.36  Aligned_cols=138  Identities=20%  Similarity=0.309  Sum_probs=113.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||.|||+.+|+||||||+||+++.+   +.++++|||..                        
T Consensus       138 ~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~---~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aP  214 (496)
T PTZ00283        138 RTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN---GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAP  214 (496)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC---CCEEEEecccCeeccccccccccccccCCcceeCH
Confidence            468999999999999999999999999999999999999877   56777777632                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         .+..++.++||||+||++|++++|+.||.+.      +..++........ ...++..+++++.+++..||..+|++
T Consensus       215 E~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~  287 (496)
T PTZ00283        215 EIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE------NMEEVMHKTLAGR-YDPLPPSISPEMQEIVTALLSSDPKR  287 (496)
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccChhh
Confidence               1223467899999999999999999777554      4455555444333 33467789999999999999999999


Q ss_pred             CcCHHHHhcCCCCCC
Q 039869          136 RWTAKHVLAHPFPSV  150 (152)
Q Consensus       136 R~~~~~~l~h~~~~~  150 (152)
                      ||++.+++.|||++.
T Consensus       288 RPs~~ell~~p~~~~  302 (496)
T PTZ00283        288 RPSSSKLLNMPICKL  302 (496)
T ss_pred             CcCHHHHHhCHHHHH
Confidence            999999999999753

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.8e-30  Score=185.85  Aligned_cols=139  Identities=24%  Similarity=0.338  Sum_probs=110.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++..++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        90 ~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE  166 (330)
T cd05586          90 EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT---GHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPE  166 (330)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC---CCEEEecCCcCcCCCCCCCCccCccCCccccCHH
Confidence            3568999999999999999999999999999999999999877   45667776621                       


Q ss_pred             --h-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --H-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        . ...++.++|+||+||++|+|++|..||.+.      +.......+........ ...++.++.+++.+||..||++
T Consensus       167 ~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~------~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~~L~~~P~~  239 (330)
T cd05586         167 VLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE------DTQQMYRNIAFGKVRFP-KNVLSDEGRQFVKGLLNRNPQH  239 (330)
T ss_pred             HHcCCCCCCCccceeccccEEEEeccCCCCCCCC------CHHHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcCCCHHH
Confidence              1 112467799999999999999999887665      44455555543332211 2347899999999999999999


Q ss_pred             Cc----CHHHHhcCCCCCC
Q 039869          136 RW----TAKHVLAHPFPSV  150 (152)
Q Consensus       136 R~----~~~~~l~h~~~~~  150 (152)
                      ||    ++.++++||||..
T Consensus       240 R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         240 RLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             CCCCCCCHHHHhcCccccC
Confidence            98    6899999999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.96  E-value=2.3e-29  Score=176.36  Aligned_cols=139  Identities=24%  Similarity=0.410  Sum_probs=104.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++..++.++.||+.||.|||+++++|+||||+||+++.+   +.++++||+...                      
T Consensus        93 ~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  169 (284)
T cd07839          93 NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN---GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPD  169 (284)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC---CcEEECccchhhccCCCCCCcCCCccccCCcChH
Confidence            3568999999999999999999999999999999999999877   456666665211                      


Q ss_pred             ---c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh------------------cCCCC------
Q 039869           60 ---G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF------------------SSEVP------  111 (152)
Q Consensus        60 ---~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~------  111 (152)
                         + ..++.++|+||+||++|++++|..|++...     +..+....+..                  ....+      
T Consensus       170 ~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd07839         170 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATT  244 (284)
T ss_pred             HHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCC-----CHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcc
Confidence               1 123667999999999999999987765442     11111111100                  00000      


Q ss_pred             ---CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 ---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 ---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                         .....++.++.+++.+||..||.+|||+.++++||||
T Consensus       245 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         245 SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence               1123467889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=7.1e-30  Score=186.02  Aligned_cols=133  Identities=27%  Similarity=0.466  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcC---------------------------
Q 039869            9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGL---------------------------   61 (152)
Q Consensus         9 ~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~---------------------------   61 (152)
                      .++.|..||+.+|.++|.+||||.||||+|+|+-.+    .+++.|||.....                           
T Consensus       461 ~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG----~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~  536 (677)
T KOG0596|consen  461 FLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKG----RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDM  536 (677)
T ss_pred             HHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEee----eEEeeeechhcccCccccceeeccccCcccccCHHHHhhc
Confidence            789999999999999999999999999999998644    6788888722111                           


Q ss_pred             -----------CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCCh-hHHHHHHHhh
Q 039869           62 -----------LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISE-DGRDFLSKCF  129 (152)
Q Consensus        62 -----------~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ll~~~l  129 (152)
                                 ..++++||||||||||+|+.|+.|| +...    +.......+....-..++|..-+. ++.++++.||
T Consensus       537 ~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf-~~~~----n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL  611 (677)
T KOG0596|consen  537 SSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPF-GQII----NQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCL  611 (677)
T ss_pred             cccccCCCcceeecCccchhhhhhHHHHHHhcCCch-HHHH----HHHHHHHhhcCCCccccccCCCCchHHHHHHHHHH
Confidence                       1257899999999999999999444 4321    111222222222112233333222 3999999999


Q ss_pred             ccccCCCcCHHHHhcCCCCCC
Q 039869          130 IRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       130 ~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ..||++||++.++|+|||++-
T Consensus       612 ~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  612 ARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             hcCcccCCCcHHHhcCccccc
Confidence            999999999999999999875

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=2.4e-29  Score=176.16  Aligned_cols=137  Identities=28%  Similarity=0.440  Sum_probs=105.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.|++.||+|||+.+++|+||+|+||+++.+   +.++++||+...                       
T Consensus       116 ~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  192 (282)
T cd06636         116 NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV  192 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEEeeCcchhhhhccccCCCcccccccccCHhh
Confidence            357888999999999999999999999999999999999876   445666664211                       


Q ss_pred             -------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           60 -------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        60 -------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                             +..++.++|+||+||++|++++|..||....     ...... ..............++.++.+++.+||..|
T Consensus       193 l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  266 (282)
T cd06636         193 IACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH-----PMRALF-LIPRNPPPKLKSKKWSKKFIDFIEGCLVKN  266 (282)
T ss_pred             cCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC-----HHhhhh-hHhhCCCCCCcccccCHHHHHHHHHHhCCC
Confidence                   1234567999999999999999997765432     222222 222222222234568899999999999999


Q ss_pred             cCCCcCHHHHhcCCCC
Q 039869          133 HQLRWTAKHVLAHPFP  148 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~  148 (152)
                      |.+||++.++++||||
T Consensus       267 p~~Rp~~~ell~~~~~  282 (282)
T cd06636         267 YLSRPSTEQLLKHPFI  282 (282)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2e-29  Score=177.15  Aligned_cols=142  Identities=23%  Similarity=0.337  Sum_probs=110.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||.|||+.+++|+||||+||+++.+   +.++++||+..                        
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  173 (285)
T cd05605          97 PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDY---GHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVV  173 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCC---CCEEEeeCCCceecCCCCccccccCCCCccCcHHh
Confidence            468999999999999999999999999999999999999876   55666666522                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc-
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-  137 (152)
                      .+..++.++|+||+||++|++++|..||.+....  .....+...+  .......+..++..+.+++.+||..||++|| 
T Consensus       174 ~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05605         174 KNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--VKREEVERRV--KEDQEEYSEKFSEAARSICRQLLTKDPGFRLG  249 (285)
T ss_pred             cCCCCCccccchhHHHHHHHHHHCCCCCCCCchh--hHHHHHHHHh--hhcccccCcccCHHHHHHHHHHccCCHHHhcC
Confidence            1223456799999999999999999777654210  0111222222  2233445667899999999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCC
Q 039869          138 ----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ----~~~~~l~h~~~~~~  151 (152)
                          ++.++++||||+..
T Consensus       250 ~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         250 CRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             CCCCCHHHHhcCcCccCC
Confidence                89999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-29  Score=183.48  Aligned_cols=140  Identities=24%  Similarity=0.320  Sum_probs=108.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        95 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~  171 (364)
T cd05599          95 KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAK---GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNF  171 (364)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC---CCEEEeecccceeccccccccccccccccccccc
Confidence            4568999999999999999999999999999999999999877   45566666522                       


Q ss_pred             ----------------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChH
Q 039869           59 ----------------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD   98 (152)
Q Consensus        59 ----------------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~   98 (152)
                                                              .+..++.++|+||+||++|++++|..||.+.      +..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~------~~~  245 (364)
T cd05599         172 LDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSD------NPQ  245 (364)
T ss_pred             cccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCC------CHH
Confidence                                                    1223467799999999999999999777654      334


Q ss_pred             HHHHHHHhcCCCCCCC--CCCChhHHHHHHHhhccccCCCcC---HHHHhcCCCCCCC
Q 039869           99 DLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWT---AKHVLAHPFPSVD  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~---~~~~l~h~~~~~~  151 (152)
                      .....+.........+  ..+++++.++|.+|+. +|.+|++   +.++++||||++.
T Consensus       246 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         246 ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            4444333222222233  2468899999999996 8999997   9999999999763

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2e-29  Score=187.03  Aligned_cols=140  Identities=27%  Similarity=0.409  Sum_probs=119.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      +.+|++.++..+++|++.||.|||+++|||||||..|||+...   +.++++|||                         
T Consensus       124 ~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld---GdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPE  200 (1187)
T KOG0579|consen  124 GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD---GDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPE  200 (1187)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec---CcEeeecccccccchhHHhhhccccCCcccccch
Confidence            4679999999999999999999999999999999999999888   677888887                         


Q ss_pred             -----HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-CCCCCCCCChhHHHHHHHhhc
Q 039869           57 -----QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-VPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        57 -----~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~  130 (152)
                           ++...+|+.++||||||+.|.+|+.+. ||....     ++.++..++..... ....|..++.++.+|+.+||.
T Consensus       201 VvmCET~KD~PYDykaDiWSlGITLIEMAqiE-PPHhel-----npMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~  274 (1187)
T KOG0579|consen  201 VVMCETFKDQPYDYKADIWSLGITLIEMAQIE-PPHHEL-----NPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLV  274 (1187)
T ss_pred             heeeccccCCCchhhhhHHhhhhHHHHHhccC-CCcccc-----chHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHh
Confidence                 345556789999999999999999999 555443     66666666655443 234578899999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .+|..||++.++|+|||++.
T Consensus       275 Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  275 KNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             cCCccCCCHHHHhhCccccc
Confidence            99999999999999999985

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=3.9e-29  Score=185.47  Aligned_cols=145  Identities=19%  Similarity=0.272  Sum_probs=105.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||.|||++||+||||||+||+++.+   ..++++|||..                        
T Consensus       255 ~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~AP  331 (461)
T PHA03211        255 RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP---EDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAP  331 (461)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCC---CCEEEcccCCceecccccccccccccCCCcCCcCH
Confidence            468999999999999999999999999999999999999877   45667777622                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCC--CCCChHHHHHHHHhcCC------------------------
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGR--GLASRDDLLELIAFSSE------------------------  109 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------------------------  109 (152)
                         .+..++.++|+|||||++||++++..+++.....  .......+.+.+.....                        
T Consensus       332 E~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  411 (461)
T PHA03211        332 EVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARN  411 (461)
T ss_pred             HHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcc
Confidence               1223467899999999999999987655543211  11111222222211110                        


Q ss_pred             -CCCC-------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          110 -VPEF-------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       110 -~~~~-------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       .+..       ...++.++.+|+.+||..||++||++.++|+||||+.
T Consensus       412 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        412 RRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             cCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence             0000       0134567899999999999999999999999999975

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.96  E-value=6e-29  Score=172.72  Aligned_cols=138  Identities=27%  Similarity=0.399  Sum_probs=108.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..+..++.|++.||+|||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (265)
T cd06631          97 GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPN---GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPY  173 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCC---CeEEeccchhhHhhhhccccccccccccccCCCcc
Confidence            568899999999999999999999999999999999999876   44556655422                        


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                             .+..++.++|+||+|+++|++++|..|+....     ...............+..+..++.++.+++++||..
T Consensus       174 ~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  248 (265)
T cd06631         174 WMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD-----RLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTR  248 (265)
T ss_pred             ccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC-----hHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcC
Confidence                   11223567999999999999999997765431     222222222222344566778999999999999999


Q ss_pred             ccCCCcCHHHHhcCCCC
Q 039869          132 VHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~  148 (152)
                      +|++||++.++++||||
T Consensus       249 ~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         249 DQHERPSALQLLRHDFL  265 (265)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.96  E-value=3.2e-29  Score=174.33  Aligned_cols=137  Identities=33%  Similarity=0.476  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||++||+++++|+||+|+||+++.+   ..++++||+..                        
T Consensus       101 ~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  177 (266)
T cd06651         101 GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMS  177 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC---CCEEEccCCCccccccccccCCccccCCccccccC
Confidence            468899999999999999999999999999999999999876   44566666521                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          .+..++.++|+||+||++|++++|+.||...      ...............+.++..+++.+.+++ .|+..+|+
T Consensus       178 PE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~  250 (266)
T cd06651         178 PEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY------EAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEAR  250 (266)
T ss_pred             HHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc------chHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChh
Confidence                1222356799999999999999999766543      222222233333344566777888899998 57778999


Q ss_pred             CCcCHHHHhcCCCCC
Q 039869          135 LRWTAKHVLAHPFPS  149 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~  149 (152)
                      +||++.++++||||+
T Consensus       251 ~Rp~~~eil~hp~~~  265 (266)
T cd06651         251 HRPSAEELLRHPFAQ  265 (266)
T ss_pred             hCcCHHHHhcCcccc
Confidence            999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.96  E-value=4.4e-29  Score=174.95  Aligned_cols=138  Identities=26%  Similarity=0.383  Sum_probs=103.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.|++.||+|||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus        96 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  172 (285)
T cd07861          96 QYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNK---GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEV  172 (285)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCC---CcEEECcccceeecCCCcccccCCcccccccChHH
Confidence            568999999999999999999999999999999999999877   45566666521                        


Q ss_pred             -h-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh------------------c--------CCC
Q 039869           59 -H-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF------------------S--------SEV  110 (152)
Q Consensus        59 -~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~--------~~~  110 (152)
                       . ...++.++|+||+|+++|++++|+.||.+..     ...........                  .        ...
T Consensus       173 ~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
T cd07861         173 LLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDS-----EIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSL  247 (285)
T ss_pred             hcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchh
Confidence             1 1223567999999999999999997775432     11111111000                  0        000


Q ss_pred             CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ......++.++.+++.+||..||++||++.++++||||
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         248 RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            01123478899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.96  E-value=3.7e-29  Score=176.04  Aligned_cols=140  Identities=23%  Similarity=0.386  Sum_probs=105.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++..++.++.|++.||++||+.+++|+||||+||+++..   +.++++||+...                      
T Consensus       122 ~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  198 (291)
T cd06639         122 GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPE  198 (291)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC---CCEEEeecccchhcccccccccCccCCccccChh
Confidence            3568899999999999999999999999999999999999876   445666665111                      


Q ss_pred             --------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           60 --------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        60 --------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                              +..++.++|+||+||++|++++|+.|+....     ....+.............+...+..+.+++.+||..
T Consensus       199 ~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  273 (291)
T cd06639         199 VIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH-----PVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIK  273 (291)
T ss_pred             hhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc-----HHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhc
Confidence                    0113568999999999999999997665432     222222221111111123445778899999999999


Q ss_pred             ccCCCcCHHHHhcCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~  149 (152)
                      +|++||++.++++||||+
T Consensus       274 ~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         274 DFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ChhhCcCHHHHhcCcccC
Confidence            999999999999999996

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.96  E-value=4.9e-29  Score=173.75  Aligned_cols=142  Identities=22%  Similarity=0.340  Sum_probs=109.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH---------------------hhcC
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ---------------------RHGL   61 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~---------------------~~~~   61 (152)
                      +++++.+++.++.|++.||.+||+.|++|+||+|+||+++.++  ..++++||+.                     ..+.
T Consensus       104 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (267)
T PHA03390        104 GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK--DRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGH  181 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC--CeEEEecCccceecCCCccCCCCCcccChhhhcCC
Confidence            4789999999999999999999999999999999999998763  1556666652                     1233


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC-HH
Q 039869           62 LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT-AK  140 (152)
Q Consensus        62 ~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~-~~  140 (152)
                      .++.++|+||+|+++|++++|+.|+..... .......+....   ......+..++..+.++|.+||+.+|.+|++ ++
T Consensus       182 ~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  257 (267)
T PHA03390        182 NYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKRQ---QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYN  257 (267)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHhh---cccCCcccccCHHHHHHHHHHhccChhhCCchHH
Confidence            446779999999999999999977764321 111111222222   2233455678999999999999999999996 69


Q ss_pred             HHhcCCCCCC
Q 039869          141 HVLAHPFPSV  150 (152)
Q Consensus       141 ~~l~h~~~~~  150 (152)
                      ++++||||..
T Consensus       258 ~~l~h~~~~~  267 (267)
T PHA03390        258 EIIKHPFLKI  267 (267)
T ss_pred             HHhcCCcccC
Confidence            9999999974

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=4.7e-29  Score=178.17  Aligned_cols=138  Identities=21%  Similarity=0.271  Sum_probs=111.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        96 ~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~---~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  172 (323)
T cd05615          96 GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSE---GHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEI  172 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC---CCEEEeccccccccCCCCccccCccCCccccCHHH
Confidence            568999999999999999999999999999999999999877   45667776621                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|..||.+.      ........+...  ....|..++.++.+++.+||..+|.+|+
T Consensus       173 ~~~~~~~~~~DiwslGvil~elltG~~pf~~~------~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~l~~~p~~R~  244 (323)
T cd05615         173 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE------DEDELFQSIMEH--NVSYPKSLSKEAVSICKGLMTKHPSKRL  244 (323)
T ss_pred             HcCCCCCCccchhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHcccCHhhCC
Confidence             1223466799999999999999999777554      444444444332  3346678899999999999999999999


Q ss_pred             C-----HHHHhcCCCCCCC
Q 039869          138 T-----AKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~~  151 (152)
                      +     ..++++||||+..
T Consensus       245 ~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         245 GCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CCCCCCHHHHhcCcccCCC
Confidence            7     4689999999863

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-29  Score=182.58  Aligned_cols=139  Identities=23%  Similarity=0.351  Sum_probs=108.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        96 ~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (350)
T cd05573          96 DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDAD---GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDN  172 (350)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC---CCEEeecCCCCccCcccCccccccccccccccccc
Confidence            468999999999999999999999999999999999999877   45666666521                        


Q ss_pred             ------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC
Q 039869           59 ------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS  108 (152)
Q Consensus        59 ------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (152)
                                                    .+..++.++|+|||||++|+|++|+.||...      ........+....
T Consensus       173 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~  246 (350)
T cd05573         173 VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD------TLQETYNKIINWK  246 (350)
T ss_pred             ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC------CHHHHHHHHhccC
Confidence                                          1223467899999999999999999777655      3334433333311


Q ss_pred             CCCCCC--CCCChhHHHHHHHhhccccCCCcC-HHHHhcCCCCCCC
Q 039869          109 EVPEFP--SNISEDGRDFLSKCFIRVHQLRWT-AKHVLAHPFPSVD  151 (152)
Q Consensus       109 ~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~~-~~~~l~h~~~~~~  151 (152)
                      .....|  ..+++++.+++.+|+. +|.+|++ +.++++||||++.
T Consensus       247 ~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         247 ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence            222222  3369999999999997 9999999 9999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.96  E-value=6.5e-29  Score=171.50  Aligned_cols=138  Identities=27%  Similarity=0.362  Sum_probs=105.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +.++++..++.++.|++.|+.|||..+++|+||+|+||+++.+   +.+++.||+.                        
T Consensus        93 ~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE  169 (256)
T cd06612          93 NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEE---GQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPE  169 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCC---CcEEEcccccchhcccCccccccccCCccccCHH
Confidence            3568899999999999999999999999999999999999876   4456666541                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||+|+++|++++|+.|+...      ......... .........+..++.++.+++.+|+..+|++
T Consensus       170 ~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~  243 (256)
T cd06612         170 VIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI------HPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEE  243 (256)
T ss_pred             HHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc------chhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhh
Confidence             22334467899999999999999999766543      222221111 1111122234557889999999999999999


Q ss_pred             CcCHHHHhcCCCC
Q 039869          136 RWTAKHVLAHPFP  148 (152)
Q Consensus       136 R~~~~~~l~h~~~  148 (152)
                      ||++.++++||||
T Consensus       244 Rps~~~il~~~~~  256 (256)
T cd06612         244 RPSAIQLLQHPFI  256 (256)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=5.3e-29  Score=178.87  Aligned_cols=134  Identities=21%  Similarity=0.314  Sum_probs=118.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC-CccCCCCCCCeeeecCCCchhHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHG-LVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~-i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------   56 (152)
                      +++++...+..++.||+.|+.|||+++ ||||||||+|+|++.+.  ..+|++|||                        
T Consensus       136 ~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~--~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAP  213 (362)
T KOG0192|consen  136 KRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG--KTLKIADFGLSREKVISKTSMTSVAGTYRWMAP  213 (362)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC--CEEEECCCccceeeccccccccCCCCCccccCh
Confidence            567999999999999999999999999 99999999999999773  378888887                        


Q ss_pred             -Hhh--cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           57 -QRH--GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        57 -~~~--~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                       ...  +..++.++||||||+++||++||+.||-+.      ....+...+......+.+|..+++.+..++..||..||
T Consensus       214 Ev~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~------~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp  287 (362)
T KOG0192|consen  214 EVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDL------APVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDP  287 (362)
T ss_pred             hhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCC
Confidence             222  346789999999999999999999788776      44677777777888899999999999999999999999


Q ss_pred             CCCcCHHHHh
Q 039869          134 QLRWTAKHVL  143 (152)
Q Consensus       134 ~~R~~~~~~l  143 (152)
                      ++||++.+++
T Consensus       288 ~~RP~f~ei~  297 (362)
T KOG0192|consen  288 SRRPSFLEIV  297 (362)
T ss_pred             CcCCCHHHHH
Confidence            9999999875

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=3.9e-29  Score=176.55  Aligned_cols=140  Identities=26%  Similarity=0.357  Sum_probs=108.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.++..++.|++.||+|||..|++|+||||+||+++.+   +.++++||+..                        
T Consensus       111 ~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  187 (296)
T cd06654         111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV  187 (296)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC---CCEEECccccchhccccccccCcccCCccccCHHH
Confidence            457889999999999999999999999999999999999876   45666666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.||....     ..................+..++..+.+++.+||..+|++||
T Consensus       188 ~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  262 (296)
T cd06654         188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-----PLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG  262 (296)
T ss_pred             HcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC-----HHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCc
Confidence             12234578999999999999999998876553     112222222222222234566888999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.+++.||||..
T Consensus       263 t~~eil~~~~~~~  275 (296)
T cd06654         263 SAKELLQHQFLKI  275 (296)
T ss_pred             CHHHHhhChhhhc
Confidence            9999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.96  E-value=6.2e-29  Score=177.70  Aligned_cols=140  Identities=21%  Similarity=0.277  Sum_probs=100.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH--------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL--------------------------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~--------------------------   56 (152)
                      +.+++..++.++.|++.||+|||+++++||||||+||+++.++..   ++.+++                          
T Consensus        96 ~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (327)
T cd08227          96 DGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV---YLSGLRSNLSMINHGQRLRVVHDFPKYSVKVL  172 (327)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcE---EEcccchhhcccccccccccccccccccccee
Confidence            458899999999999999999999999999999999999866332   222221                          


Q ss_pred             ------Hhhc--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc---------------------
Q 039869           57 ------QRHG--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS---------------------  107 (152)
Q Consensus        57 ------~~~~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  107 (152)
                            ...+  ..++.++|+||+||++|++++|..||....     ............                     
T Consensus       173 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (327)
T cd08227         173 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP-----ATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSR  247 (327)
T ss_pred             cccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc-----hhHHHHHHhcCCccccccccchhhhhcccCCcc
Confidence                  1111  235678999999999999999997765321     111110000000                     


Q ss_pred             ----------------------CCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          108 ----------------------SEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       108 ----------------------~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                            ....+....+++++.+++.+||..||++|||+.++++||||++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         248 SGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             cCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                                  0000112235678999999999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=1e-29  Score=181.85  Aligned_cols=139  Identities=20%  Similarity=0.260  Sum_probs=109.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++..++.++.|++.||.|||+.+++||||||+||+++.+   +.++++|||...                       
T Consensus        97 ~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE  173 (330)
T cd05601          97 DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRT---GHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPE  173 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCC---CCEEeccCCCCeECCCCCceeeecccCCccccCHH
Confidence            568999999999999999999999999999999999999877   567777776211                       


Q ss_pred             ---------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC--CCCChhHHHHHHHh
Q 039869           60 ---------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKC  128 (152)
Q Consensus        60 ---------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~  128 (152)
                               +..++.++|+||+||++|++++|..||...      ........+.........+  ..++.++.+++.+|
T Consensus       174 ~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~l  247 (330)
T cd05601         174 VLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG------TSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSL  247 (330)
T ss_pred             HhccccccccCCCCCcceeecccceeeeeccCCCCCCCC------CHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHH
Confidence                     222356799999999999999999777554      3333333332222222222  35788999999999


Q ss_pred             hccccCCCcCHHHHhcCCCCCCC
Q 039869          129 FIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      |. +|.+||++.+++.||||+..
T Consensus       248 l~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         248 LC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             cc-ChhhCCCHHHHhCCCCcCCC
Confidence            98 99999999999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=7.2e-30  Score=181.91  Aligned_cols=138  Identities=23%  Similarity=0.364  Sum_probs=111.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||+.|++||||||+||+++.+   +.++++|||..                        
T Consensus        93 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~  169 (318)
T cd05582          93 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE---GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV  169 (318)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCC---CcEEEeeccCCcccCCCCCceecccCChhhcCHHH
Confidence            468999999999999999999999999999999999999877   55667777621                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|+.|+...      +.......+..  ....++..++.++.+++.+||..||++||
T Consensus       170 ~~~~~~~~~~DiwslG~il~el~tg~~p~~~~------~~~~~~~~i~~--~~~~~p~~~~~~~~~li~~~l~~~P~~R~  241 (318)
T cd05582         170 VNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK------DRKETMTMILK--AKLGMPQFLSPEAQSLLRALFKRNPANRL  241 (318)
T ss_pred             HcCCCCCCccceeccceEeeeeccCCCCCCCC------CHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhhcCHhHcC
Confidence             1233467899999999999999999777554      44444444432  23346677899999999999999999999


Q ss_pred             C-----HHHHhcCCCCCCC
Q 039869          138 T-----AKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~~  151 (152)
                      +     +.+++.||||+..
T Consensus       242 ~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         242 GAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             CCCCCCHHHHhCCCCcCCC
Confidence            9     7789999999763

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6e-29  Score=174.04  Aligned_cols=139  Identities=29%  Similarity=0.433  Sum_probs=108.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.|||+++++|+||+|+||+++.+   +.++++||+..                        
T Consensus        98 ~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~  174 (280)
T cd06611          98 RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLD---GDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEV  174 (280)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCC---CCEEEccCccchhhcccccccceeecchhhcCHHH
Confidence            568999999999999999999999999999999999999876   44555555411                        


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhcc
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                            .+..++.++|+||+|+++|++++|+.|+...      ............. .....+..++.++.+++..||..
T Consensus       175 ~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  248 (280)
T cd06611         175 VACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL------NPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVK  248 (280)
T ss_pred             HhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC------CHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhcc
Confidence                  1223456799999999999999999776543      3333333333222 12234567889999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~  150 (152)
                      +|++||++.++++||||.+
T Consensus       249 ~p~~Rps~~~il~~~~~~~  267 (280)
T cd06611         249 DPDDRPTAAELLKHPFVSD  267 (280)
T ss_pred             ChhhCcCHHHHhcChhhcc
Confidence            9999999999999999976

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.96  E-value=7.1e-29  Score=175.44  Aligned_cols=139  Identities=24%  Similarity=0.384  Sum_probs=104.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.|++.||+|||+.+++|+||||+||+++.+   ..++++|||...                       
T Consensus        99 ~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~  175 (301)
T cd07873          99 NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER---GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDI  175 (301)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC---CcEEECcCcchhccCCCCCcccccceeecccCcHH
Confidence            457899999999999999999999999999999999999877   456666665221                       


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-c------------------C-CCC-----
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-S------------------S-EVP-----  111 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------~-~~~-----  111 (152)
                         ...++.++|+||+|+++|++++|+.||....      ..+....+.. .                  . ..+     
T Consensus       176 ~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (301)
T cd07873         176 LLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRAD  249 (301)
T ss_pred             HhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCChhhchhhhccccccccccCccccc
Confidence               1223567999999999999999997775542      1111111000 0                  0 000     


Q ss_pred             ---CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 ---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                         .....++..+.++|.+||..||.+|||+.++++||||+.
T Consensus       250 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         250 CLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             cHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence               012346788999999999999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.96  E-value=5e-29  Score=176.05  Aligned_cols=139  Identities=28%  Similarity=0.393  Sum_probs=109.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.++..++.|++.||++||+.|++|+||+|+||+++.+   +.++++||+..                        
T Consensus       110 ~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  186 (296)
T cd06655         110 TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV  186 (296)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEEccCccchhcccccccCCCcCCCccccCcch
Confidence            468899999999999999999999999999999999999876   45666666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH-hcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA-FSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+||++|++++|+.||.+.      +......... ........+..++..+.+++.+||..+|++|
T Consensus       187 ~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  260 (296)
T cd06655         187 VTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE------NPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKR  260 (296)
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhC
Confidence             1122356799999999999999999777654      2222222222 2222334456788999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.+++.||||+.
T Consensus       261 pt~~~il~~~~~~~  274 (296)
T cd06655         261 GSAKELLQHPFLKL  274 (296)
T ss_pred             CCHHHHhhChHhhh
Confidence            99999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.1e-29  Score=183.31  Aligned_cols=139  Identities=21%  Similarity=0.292  Sum_probs=107.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .+++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        95 ~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~---~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~  171 (377)
T cd05629          95 YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRG---GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKN  171 (377)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC---CCEEEeeccccccccccccccccccccccccccc
Confidence            3568899999999999999999999999999999999999876   45566666532                       


Q ss_pred             -------------------------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCc
Q 039869           59 -------------------------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGS   89 (152)
Q Consensus        59 -------------------------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~   89 (152)
                                                                       .+..++.++|+||+||++|++++|..||.+.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  251 (377)
T cd05629         172 RIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSE  251 (377)
T ss_pred             ccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCC
Confidence                                                             1223467899999999999999999777654


Q ss_pred             cCCCCCChHHHHHHHHhcCCCCCCCC--CCChhHHHHHHHhhccccCCC---cCHHHHhcCCCCCC
Q 039869           90 FGRGLASRDDLLELIAFSSEVPEFPS--NISEDGRDFLSKCFIRVHQLR---WTAKHVLAHPFPSV  150 (152)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~l~~~p~~R---~~~~~~l~h~~~~~  150 (152)
                            ...+....+........+|.  .++.++.+++.+||. +|.+|   +++.+++.||||++
T Consensus       252 ------~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         252 ------NSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             ------CHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence                  33444444332222233333  478899999999997 67765   59999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=8.9e-29  Score=177.52  Aligned_cols=133  Identities=17%  Similarity=0.268  Sum_probs=103.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||+|||++|++||||||+||+++.+   ..++++|||..                        
T Consensus       169 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  245 (338)
T cd05102         169 SPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN---NVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP  245 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC---CcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence            468899999999999999999999999999999999999877   55677777622                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|||||||++||+++ |..||.+..     ....+..... .......+..+++++.+++.+||..||+
T Consensus       246 E~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~  319 (338)
T cd05102         246 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ-----INEEFCQRLK-DGTRMRAPENATPEIYRIMLACWQGDPK  319 (338)
T ss_pred             HHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence               12224678999999999999997 876665542     2222333332 2233445677899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       320 ~RPs~~el~~  329 (338)
T cd05102         320 ERPTFSALVE  329 (338)
T ss_pred             hCcCHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.6e-29  Score=185.30  Aligned_cols=130  Identities=24%  Similarity=0.358  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hhcCCCCc
Q 039869            8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RHGLLLIY   65 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~~~~~~~   65 (152)
                      .++..++++|+.++.|||++|++|||+||+|||++  +..+.+++++||.                      .....++.
T Consensus       415 ~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~  492 (612)
T KOG0603|consen  415 SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTE  492 (612)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCc
Confidence            67888999999999999999999999999999995  2336677777762                      22445688


Q ss_pred             chhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcC
Q 039869           66 HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus        66 ~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      ++|+||||++||+|++|+.|+..-.     ...++...+..    +.+...+|.++.+|+.+||..||.+|+++.++..|
T Consensus       493 acD~WSLGvlLy~ML~G~tp~~~~P-----~~~ei~~~i~~----~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  493 ACDWWSLGVLLYEMLTGRTLFAAHP-----AGIEIHTRIQM----PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             chhhHHHHHHHHHHHhCCCccccCC-----chHHHHHhhcC----CccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            9999999999999999997776543     33444444432    33337899999999999999999999999999999


Q ss_pred             CCC
Q 039869          146 PFP  148 (152)
Q Consensus       146 ~~~  148 (152)
                      ||+
T Consensus       564 ~w~  566 (612)
T KOG0603|consen  564 PWF  566 (612)
T ss_pred             cch
Confidence            999

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=7e-29  Score=179.49  Aligned_cols=141  Identities=24%  Similarity=0.358  Sum_probs=118.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCC-chhHHHHHHHH------------------------hh
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD-AHEAEISAFLQ------------------------RH   59 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~-~~~~~l~~~~~------------------------~~   59 (152)
                      +++..+..+++|++.++.|||+.|++|||+||+|+++..... ...++++|||.                        ..
T Consensus       132 ~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~  211 (382)
T KOG0032|consen  132 YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLG  211 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhc
Confidence            899999999999999999999999999999999999976543 35788999981                        22


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      +..++..+||||+|+++|.|++|.+||++.      ........+..+...  .+....++..+.+++++++..||.+|+
T Consensus       212 ~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~------~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~  285 (382)
T KOG0032|consen  212 GRPYGDEVDVWSIGVILYILLSGVPPFWGE------TEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRL  285 (382)
T ss_pred             CCCCCcccchhHHHHHHHHHhhCCCCCcCC------ChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCC
Confidence            345678899999999999999999999988      445555555555442  234466899999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++|+|||+++.
T Consensus       286 ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  286 TAAQALQHPWIKSI  299 (382)
T ss_pred             CHHHHhcCccccCC
Confidence            99999999999864

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.96  E-value=9.1e-29  Score=174.19  Aligned_cols=139  Identities=26%  Similarity=0.403  Sum_probs=105.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec-CCCchhHHHHHHHHh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .++++..++.++.||+.||+|||+++++|+||+|+||+++. +   ..++++||+..                       
T Consensus       105 ~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE  181 (295)
T cd07837         105 RPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQK---GLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPE  181 (295)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCC---CeEEEeecccceecCCCccccCCcccccCCCChH
Confidence            56899999999999999999999999999999999999987 5   45666766521                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC---------------------CC---
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE---------------------VP---  111 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~---  111 (152)
                         .+..++.++|+||+|+++|++++|..|+.+..     ..............                     .+   
T Consensus       182 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (295)
T cd07837         182 VLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS-----ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDL  256 (295)
T ss_pred             HhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhH
Confidence               11224678999999999999999997776542     22222111110000                     00   


Q ss_pred             -CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          112 -EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       112 -~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                       .....++.++.++|.+||..+|++||++.+++.||||+
T Consensus       257 ~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         257 SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence             01134788899999999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=6.1e-29  Score=174.05  Aligned_cols=141  Identities=21%  Similarity=0.262  Sum_probs=105.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      ++++..+..++.|++.||+|||+.|++||||||+||+++.+   +.+++.||+..                        .
T Consensus        91 ~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  167 (277)
T cd05607          91 GLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ---GNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILK  167 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC---CCEEEeeceeeeecCCCceeeccCCCCCccCHHHHc
Confidence            57888999999999999999999999999999999999877   45666676521                        2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      +..++.++|+||+||++|++++|+.|+......  .....+..... ..........++.++.+++.+||+.||++||++
T Consensus       168 ~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~  244 (277)
T cd05607         168 EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK--VAKEELKRRTL-EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGS  244 (277)
T ss_pred             cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch--hhHHHHHHHhh-ccccccccccCCHHHHHHHHHHhccCHhhCCCC
Confidence            233567899999999999999999776543210  01122222221 111122224688999999999999999999999


Q ss_pred             ----HHHhcCCCCCC
Q 039869          140 ----KHVLAHPFPSV  150 (152)
Q Consensus       140 ----~~~l~h~~~~~  150 (152)
                          ++++.||||+.
T Consensus       245 ~~~~~~~~~h~~f~~  259 (277)
T cd05607         245 REKNDDPRKHEFFKT  259 (277)
T ss_pred             ccchhhhhcChhhcC
Confidence                67889999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.3e-29  Score=167.06  Aligned_cols=138  Identities=25%  Similarity=0.336  Sum_probs=117.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hh
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QR   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~   58 (152)
                      +++|++..++.|++|++.||.|+|.++++||||||+|+|++..   +.++++|||                       ..
T Consensus       118 ~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~---~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv  194 (281)
T KOG0580|consen  118 MKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMV  194 (281)
T ss_pred             cccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCC---CCeeccCCCceeecCCCCceeeecccccCCHhhc
Confidence            3569999999999999999999999999999999999999887   778888887                       34


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+...+..+|+|++|++.||++.|.+||.+.      ...+..+.+....  ..+|..++.++.++|..|+..+|.+|.+
T Consensus       195 ~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~------~~~etYkrI~k~~--~~~p~~is~~a~dlI~~ll~~~p~~r~~  266 (281)
T KOG0580|consen  195 EGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ------SHSETYKRIRKVD--LKFPSTISGGAADLISRLLVKNPIERLA  266 (281)
T ss_pred             CCCCccchhhHHHHHHHHHHHHhcCCchhhh------hhHHHHHHHHHcc--ccCCcccChhHHHHHHHHhccCcccccc
Confidence            4555678899999999999999999777665      4445555544333  3456889999999999999999999999


Q ss_pred             HHHHhcCCCCCC
Q 039869          139 AKHVLAHPFPSV  150 (152)
Q Consensus       139 ~~~~l~h~~~~~  150 (152)
                      ..+++.|||+..
T Consensus       267 l~~v~~hpwI~a  278 (281)
T KOG0580|consen  267 LTEVMDHPWIVA  278 (281)
T ss_pred             HHHHhhhHHHHh
Confidence            999999999863

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=1.8e-29  Score=180.41  Aligned_cols=138  Identities=22%  Similarity=0.267  Sum_probs=110.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        90 ~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE  166 (325)
T cd05604          90 ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ---GHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPE  166 (325)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC---CCEEEeecCCcccCCCCCCCcccccCChhhCCHH
Confidence            3568999999999999999999999999999999999999877   45667777621                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++|+||+||++|+|++|..||.+.      +..+....+...  ....+...+..+.+++.+||..+|++|
T Consensus       167 ~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~ll~~~p~~R  238 (325)
T cd05604         167 VIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR------DVAEMYDNILHK--PLVLRPGASLTAWSILEELLEKDRQRR  238 (325)
T ss_pred             HHcCCCCCCcCccccccceehhhhcCCCCCCCC------CHHHHHHHHHcC--CccCCCCCCHHHHHHHHHHhccCHHhc
Confidence              2233467899999999999999999777654      444444444322  233445688999999999999999999


Q ss_pred             cCH----HHHhcCCCCCC
Q 039869          137 WTA----KHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~----~~~l~h~~~~~  150 (152)
                      |+.    .++++||||..
T Consensus       239 ~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         239 LGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             CCCCCCHHHHhcCCCcCC
Confidence            976    58999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=9.6e-29  Score=171.77  Aligned_cols=136  Identities=33%  Similarity=0.508  Sum_probs=108.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..+..++.|++.||++||++|++|+||+|+||+++.+   ..++++||+..                        
T Consensus       101 ~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (267)
T cd06628         101 GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNK---GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVF  177 (267)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCC---CCEEecccCCCcccccccccCCccccccccCCCcC
Confidence            468899999999999999999999999999999999999876   45566666511                        


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                             .+..++.++|+||+|+++|++++|..||....     ....+. ... ....+..+..++..+.+++.+||..
T Consensus       178 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~  250 (267)
T cd06628         178 WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT-----QLQAIF-KIG-ENASPEIPSNISSEAIDFLEKTFEI  250 (267)
T ss_pred             ccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc-----HHHHHH-HHh-ccCCCcCCcccCHHHHHHHHHHccC
Confidence                   12223567999999999999999997775542     222222 221 1334556778899999999999999


Q ss_pred             ccCCCcCHHHHhcCCCC
Q 039869          132 VHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~  148 (152)
                      +|++||++.++++||||
T Consensus       251 ~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         251 DHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CchhCcCHHHHhhCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.96  E-value=9.4e-29  Score=171.56  Aligned_cols=145  Identities=27%  Similarity=0.441  Sum_probs=111.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~   58 (152)
                      .++++..+..++.|++.|+++||+ .+++|+||+|+||+++.+   +.++++||+                       ..
T Consensus        95 ~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~  171 (265)
T cd06605          95 GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSR---GQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERI  171 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCC---CCEEEeecccchhhHHHHhhcccCChhccCHHHH
Confidence            568899999999999999999999 999999999999999876   445555554                       12


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCC-CChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..++.++|+||+|+++|++++|..|+..... .........+... ....+..+.. ++.++.+++..||..+|++||
T Consensus       172 ~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  249 (265)
T cd06605         172 QGNDYSVKSDIWSLGLSLIELATGRFPYPPEND-PPDGIFELLQYIV-NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERP  249 (265)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCCcccc-ccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHcCCCchhCc
Confidence            234457789999999999999999977654421 1112222332222 2233444444 888999999999999999999


Q ss_pred             CHHHHhcCCCCCCCC
Q 039869          138 TAKHVLAHPFPSVDE  152 (152)
Q Consensus       138 ~~~~~l~h~~~~~~~  152 (152)
                      ++.+++.||||+..|
T Consensus       250 t~~~ll~~~~~~~~~  264 (265)
T cd06605         250 SYKELLEHPFIKKYE  264 (265)
T ss_pred             CHHHHhhCchhhccc
Confidence            999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=7.6e-29  Score=175.28  Aligned_cols=141  Identities=23%  Similarity=0.273  Sum_probs=110.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      ++.|++..++.|+.+|+.||+|||..|||+|||||+||||.++   +.+-++||.                         
T Consensus       173 ~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvred---GHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~  249 (459)
T KOG0610|consen  173 GKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVRED---GHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPS  249 (459)
T ss_pred             CCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecC---CcEEeeeccccccCCCCCeeeccCCCCCCCCCcc
Confidence            6789999999999999999999999999999999999999655   333333332                         


Q ss_pred             --------------------------------------------------------HhhcCCCCcchhHHHHHHHHHHHH
Q 039869           57 --------------------------------------------------------QRHGLLLIYHVDTWALGRVFVEMM   80 (152)
Q Consensus        57 --------------------------------------------------------~~~~~~~~~~~DvwslG~~l~~~~   80 (152)
                                                                              ...|.....++|=|+||+++|||+
T Consensus       250 ~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmL  329 (459)
T KOG0610|consen  250 CRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEML  329 (459)
T ss_pred             cccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHH
Confidence                                                                    001111245699999999999999


Q ss_pred             hcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC----HHHHhcCCCCCCC
Q 039869           81 TAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT----AKHVLAHPFPSVD  151 (152)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~----~~~~l~h~~~~~~  151 (152)
                      .|..||-+.      +..+...++.......+-....+..+.|||+++|..||++|..    +.++.+||||++.
T Consensus       330 yG~TPFKG~------~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  330 YGTTPFKGS------NNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV  398 (459)
T ss_pred             hCCCCcCCC------CchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence            999999888      5555555554333322222367889999999999999999997    8899999999874

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=8.8e-29  Score=175.57  Aligned_cols=140  Identities=23%  Similarity=0.281  Sum_probs=105.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.+++.++.|++.||+|||+.|++|+||||+||+++.+   +.++++||+..                        
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  179 (309)
T cd07845         103 TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDK---GCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPEL  179 (309)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---CCEEECccceeeecCCccCCCCcccccccccChhh
Confidence            468899999999999999999999999999999999999877   45566666511                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--------------------CCC---
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--------------------PEF---  113 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~---  113 (152)
                        ....++.++|+||+|+++|++++|..|+.+.      +.......+......                    ...   
T Consensus       180 ~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
T cd07845         180 LLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK------SEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYN  253 (309)
T ss_pred             hcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCC
Confidence              1123467899999999999999999777554      222222211110000                    000   


Q ss_pred             -----CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          114 -----PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       114 -----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                           ....++++.+++.+||..||++||++.+++.||||++.
T Consensus       254 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         254 NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence                 12257888999999999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=4.8e-29  Score=180.57  Aligned_cols=133  Identities=18%  Similarity=0.270  Sum_probs=114.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.++..+.+.++.||++|++||+++++|||||...|||++.+   ..+|++|||..                       
T Consensus       297 ~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~---~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAP  373 (468)
T KOG0197|consen  297 GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDED---LVVKISDFGLARLIGDDEYTASEGGKFPIKWTAP  373 (468)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccC---ceEEEcccccccccCCCceeecCCCCCCceecCH
Confidence            4668899999999999999999999999999999999999988   78999999833                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         ....++.++||||||++|||++|-...++..+     ...++.+.+..+... +.|..+|+++.+++..||..+|++
T Consensus       374 Ea~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~ev~~~le~GyRl-p~P~~CP~~vY~lM~~CW~~~P~~  447 (468)
T KOG0197|consen  374 EALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEEVLELLERGYRL-PRPEGCPDEVYELMKSCWHEDPED  447 (468)
T ss_pred             HHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-----CHHHHHHHHhccCcC-CCCCCCCHHHHHHHHHHhhCCccc
Confidence               23335889999999999999999554555554     788888998876654 468899999999999999999999


Q ss_pred             CcCHHHHh
Q 039869          136 RWTAKHVL  143 (152)
Q Consensus       136 R~~~~~~l  143 (152)
                      |||++.+.
T Consensus       448 RPtF~~L~  455 (468)
T KOG0197|consen  448 RPTFETLR  455 (468)
T ss_pred             CCCHHHHH
Confidence            99998654

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.96  E-value=8.6e-29  Score=173.38  Aligned_cols=142  Identities=22%  Similarity=0.289  Sum_probs=111.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||.|||+.+++|+||||+||+++.+   +.++++||+..                       
T Consensus        91 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~  167 (278)
T cd05606          91 HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL  167 (278)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC---CCEEEccCcCccccCccCCcCcCCCcCCcCcHHh
Confidence            3568999999999999999999999999999999999999877   45667776521                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+|+++|++++|+.|+......   .........  ....+..+..++.++.+++.+||..+|.+|+
T Consensus       168 ~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~---~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~  242 (278)
T cd05606         168 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---DKHEIDRMT--LTMAVELPDSFSPELRSLLEGLLQRDVNRRL  242 (278)
T ss_pred             cCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc---chHHHHHHh--hccCCCCCCcCCHHHHHHHHHHhhcCHHhcc
Confidence             1233567799999999999999999777654321   112222222  1223456667899999999999999999999


Q ss_pred             -----CHHHHhcCCCCCCC
Q 039869          138 -----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 -----~~~~~l~h~~~~~~  151 (152)
                           ++.++++||||+..
T Consensus       243 ~~~~~~~~~ll~~~~~~~~  261 (278)
T cd05606         243 GCLGRGAQEVKEHPFFRSL  261 (278)
T ss_pred             CCCCCCHHHHHhCccccCC
Confidence                 99999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=6.5e-29  Score=181.00  Aligned_cols=139  Identities=19%  Similarity=0.263  Sum_probs=105.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||+|||..||+||||||+||+++.+   +.++++|||..                        
T Consensus        96 ~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~---~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~  172 (381)
T cd05626          96 EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD---GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSME  172 (381)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCC---CCEEEeeCcCCcccccccccccccccccccccccC
Confidence            568899999999999999999999999999999999999876   45666666531                        


Q ss_pred             ------------------------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCcc
Q 039869           59 ------------------------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSF   90 (152)
Q Consensus        59 ------------------------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~   90 (152)
                                                                      .+..++.++|+||+||++|++++|..||... 
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~-  251 (381)
T cd05626         173 PSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAP-  251 (381)
T ss_pred             cccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCC-
Confidence                                                            1223466799999999999999999777664 


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhh--ccccCCCcCHHHHhcCCCCCC
Q 039869           91 GRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCF--IRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l--~~~p~~R~~~~~~l~h~~~~~  150 (152)
                           ........+.........  ...++.++.+++.+++  ..++..|+++.+++.||||++
T Consensus       252 -----~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~  310 (381)
T cd05626         252 -----TPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE  310 (381)
T ss_pred             -----CHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence                 333333333222222222  2357899999999855  445556999999999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.96  E-value=1e-28  Score=171.29  Aligned_cols=142  Identities=18%  Similarity=0.224  Sum_probs=113.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      +.+++..+..++.|++.||+|||+++++|+||+|+||+++.+   +.+++.||+.                        .
T Consensus        88 ~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~  164 (262)
T cd05572          88 GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSN---GYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEII  164 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCC---CCEEEeeCCcccccCcccccccccCCcCccChhHh
Confidence            457899999999999999999999999999999999999876   4455555542                        1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++|+||+|+++|++++|..|+.....    +.......+..+...+..|...+.++.+++.+||..+|++||+
T Consensus       165 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         165 LNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE----DPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             cCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC----CHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcC
Confidence            223346779999999999999999977765531    2444444444344555667777899999999999999999999


Q ss_pred             -----HHHHhcCCCCCCC
Q 039869          139 -----AKHVLAHPFPSVD  151 (152)
Q Consensus       139 -----~~~~l~h~~~~~~  151 (152)
                           +.++++||||.+.
T Consensus       241 ~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         241 NLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CcccCHHHHhcChhhhCC
Confidence                 9999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.96  E-value=1.3e-28  Score=173.45  Aligned_cols=139  Identities=29%  Similarity=0.400  Sum_probs=107.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..+..++.|++.+|++||+.+++|+||+|+||+++.+   +.+++.|||...                       
T Consensus       105 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  181 (292)
T cd06644         105 RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLD---GDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEV  181 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCC---CCEEEccCccceeccccccccceecCCccccCcee
Confidence            468899999999999999999999999999999999999876   456666665210                       


Q ss_pred             -------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhcc
Q 039869           60 -------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        60 -------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                             ...++.++|+||+||++|++++|..|+...      ............. .....+..++.++.+++.+||..
T Consensus       182 ~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  255 (292)
T cd06644         182 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL------NPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDK  255 (292)
T ss_pred             eccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc------cHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcC
Confidence                   112345799999999999999999666443      2233222222221 12234566888999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~  150 (152)
                      +|++||++.++++||||..
T Consensus       256 ~p~~Rp~~~~il~~~~~~~  274 (292)
T cd06644         256 HPETRPSAAQLLEHPFVSS  274 (292)
T ss_pred             CcccCcCHHHHhcCccccc
Confidence            9999999999999999974

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=5.7e-29  Score=176.89  Aligned_cols=145  Identities=19%  Similarity=0.264  Sum_probs=100.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC-CCchhHHHHHHHHhh-----------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-KDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~-~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .+++..++.++.|++.||.|||+.+++||||||+||++..+ ...+.++++|||...                       
T Consensus       104 ~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07867         104 QLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccC
Confidence            47889999999999999999999999999999999999432 223567777776221                       


Q ss_pred             -----c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----CChHHHHHHHHhcC---------------------
Q 039869           60 -----G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----ASRDDLLELIAFSS---------------------  108 (152)
Q Consensus        60 -----~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---------------------  108 (152)
                           + ..++.++|+||+||++|++++|+.||........    .....+........                     
T Consensus       184 PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T cd07867         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQK  263 (317)
T ss_pred             cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhh
Confidence                 1 1235679999999999999999977653321100    00001100000000                     


Q ss_pred             ----C----------CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          109 ----E----------VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       109 ----~----------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                          .          ........+..+.+++.+||..||.+|||+.++++||||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         264 DFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                0          000112235568899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=5.1e-29  Score=175.11  Aligned_cols=141  Identities=22%  Similarity=0.304  Sum_probs=108.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||.|||+.+++|+||||+||+++.+   +.++++|||..                        
T Consensus        97 ~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~  173 (285)
T cd05630          97 AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV  173 (285)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC---CCEEEeeccceeecCCCccccCCCCCccccChHHH
Confidence            358899999999999999999999999999999999999876   45667777622                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++|+||+|+++|++++|..||......   ...+...... .......+..++.++.+++.+||..||++||+
T Consensus       174 ~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s  249 (285)
T cd05630         174 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK---IKREEVERLV-KEVQEEYSEKFSPDARSLCKMLLCKDPKERLG  249 (285)
T ss_pred             cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc---chHHHHHhhh-hhhhhhcCccCCHHHHHHHHHHhhcCHHHccC
Confidence            1223466799999999999999999777654210   1111111111 11122345678899999999999999999999


Q ss_pred             -----HHHHhcCCCCCC
Q 039869          139 -----AKHVLAHPFPSV  150 (152)
Q Consensus       139 -----~~~~l~h~~~~~  150 (152)
                           +.++++||||++
T Consensus       250 ~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         250 CQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             CCCCchHHHHcChhhhc
Confidence                 899999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.96  E-value=1.2e-28  Score=172.64  Aligned_cols=145  Identities=22%  Similarity=0.313  Sum_probs=108.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------c
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------G   60 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------~   60 (152)
                      .+++..+..++.|++.||+|||+.+++|+||||+||+++.+   +.++++|||...                       +
T Consensus        91 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~  167 (279)
T cd06619          91 KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTR---GQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISG  167 (279)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCC---CCEEEeeCCcceecccccccCCCCChhhcCceeecC
Confidence            46788999999999999999999999999999999999877   567777776221                       2


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC-ChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA-SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      ..++.++|+||+|+++|++++|+.||......... ......................+.++.+++.+||..+|++||++
T Consensus       168 ~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  247 (279)
T cd06619         168 EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAP  247 (279)
T ss_pred             CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCH
Confidence            23467899999999999999999777653321111 11122222221111111234578889999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q 039869          140 KHVLAHPFPSVD  151 (152)
Q Consensus       140 ~~~l~h~~~~~~  151 (152)
                      .++++||||+..
T Consensus       248 ~eil~~~~~~~~  259 (279)
T cd06619         248 ENLMDHPFIVQY  259 (279)
T ss_pred             HHHhcCcccccc
Confidence            999999999863

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.96  E-value=1e-28  Score=174.18  Aligned_cols=140  Identities=26%  Similarity=0.382  Sum_probs=108.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.++..++.|++.||+|||+++++||||||+||+++.+   ..++++||+..                        
T Consensus       113 ~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  189 (292)
T cd06658         113 TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD---GRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEV  189 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC---CCEEEccCcchhhcccccccCceeecCccccCHHH
Confidence            468899999999999999999999999999999999999877   45666666522                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc-CCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS-SEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+|+++|++++|..|+...      +........... ..........+..+.+++.+|+..+|++|
T Consensus       190 ~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  263 (292)
T cd06658         190 ISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE------PPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQR  263 (292)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHC
Confidence             1223467899999999999999999777654      222222222211 11112234578889999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      |++.++++||||+..
T Consensus       264 pt~~~il~~~~~~~~  278 (292)
T cd06658         264 ATAQELLQHPFLKLA  278 (292)
T ss_pred             cCHHHHhhChhhhcc
Confidence            999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.7e-29  Score=172.03  Aligned_cols=139  Identities=27%  Similarity=0.395  Sum_probs=104.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++..++.++.|++.||.|||+.+++|+||+|+||+++.+   ..+++++|+..                       
T Consensus       107 ~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE  183 (275)
T cd06608         107 GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKN---AEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPE  183 (275)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccC---CeEEECCCccceecccchhhhcCccccccccCHh
Confidence            3578999999999999999999999999999999999999876   44555555411                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                             ....++.++|+||+|+++|++++|..|+....     ..................+..++.++.+++.+||..
T Consensus       184 ~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  258 (275)
T cd06608         184 VIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH-----PMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIK  258 (275)
T ss_pred             HhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc-----hHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhc
Confidence                   01223567999999999999999997765431     222222222111111122334778999999999999


Q ss_pred             ccCCCcCHHHHhcCCCC
Q 039869          132 VHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~  148 (152)
                      ||++||++.++++|||+
T Consensus       259 dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         259 NYEQRPFMEELLEHPFI  275 (275)
T ss_pred             ChhhCcCHHHHhcCCCC
Confidence            99999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=5.4e-29  Score=177.61  Aligned_cols=137  Identities=19%  Similarity=0.242  Sum_probs=110.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.||+.||+|||+++++||||||+||+++.+   +.++++|||..                        
T Consensus        91 ~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  167 (321)
T cd05603          91 RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ---GHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEV  167 (321)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC---CCEEEccCCCCccCCCCCCccccccCCcccCCHHH
Confidence            568899999999999999999999999999999999999877   56677777621                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|..||.+.      +.......+..  .....+...+.++.+++.+||..+|.+|+
T Consensus       168 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (321)
T cd05603         168 LRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR------DVSQMYDNILH--KPLQLPGGKTVAACDLLVGLLHKDQRRRL  239 (321)
T ss_pred             hcCCCCCCcCcccccchhhhhhhcCCCCCCCC------CHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHccCCHhhcC
Confidence             1223467899999999999999999777665      44444444432  23456677889999999999999999998


Q ss_pred             CH----HHHhcCCCCCC
Q 039869          138 TA----KHVLAHPFPSV  150 (152)
Q Consensus       138 ~~----~~~l~h~~~~~  150 (152)
                      +.    .++++|+||..
T Consensus       240 ~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         240 GAKADFLEIKNHVFFSP  256 (321)
T ss_pred             CCCCCHHHHhCCCCcCC
Confidence            65    58999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.96  E-value=5.8e-29  Score=175.76  Aligned_cols=140  Identities=27%  Similarity=0.371  Sum_probs=108.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.++..++.|++.||.+||+.+++|+||||+||+++.+   +.++++||+..                        
T Consensus       110 ~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  186 (297)
T cd06656         110 TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV  186 (297)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEECcCccceEccCCccCcCcccCCccccCHHH
Confidence            457889999999999999999999999999999999999876   55667776521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|..||.+...     .................+..++..+.+++.+||..+|++||
T Consensus       187 ~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  261 (297)
T cd06656         187 VTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRG  261 (297)
T ss_pred             HcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-----chheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence             122345779999999999999999977765431     11111111112222334566888899999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||+.
T Consensus       262 s~~~il~~~~~~~  274 (297)
T cd06656         262 SAKELLQHPFLKL  274 (297)
T ss_pred             CHHHHhcCchhcc
Confidence            9999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.96  E-value=5.4e-29  Score=177.94  Aligned_cols=137  Identities=23%  Similarity=0.288  Sum_probs=110.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        91 ~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~---~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~  167 (325)
T cd05602          91 RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ---GHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEV  167 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC---CCEEEccCCCCcccccCCCCcccccCCccccCHHH
Confidence            567889999999999999999999999999999999999877   55677777621                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|..||.+.      +..+....+...  ....+..++..+.+++.+||..+|.+|+
T Consensus       168 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (325)
T cd05602         168 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------NTAEMYDNILNK--PLQLKPNITNSARHLLEGLLQKDRTKRL  239 (325)
T ss_pred             HcCCCCCCccccccccHHHHHHhcCCCCCCCC------CHHHHHHHHHhC--CcCCCCCCCHHHHHHHHHHcccCHHHCC
Confidence             2233467899999999999999999777654      444444443322  2345567899999999999999999999


Q ss_pred             CHH----HHhcCCCCCC
Q 039869          138 TAK----HVLAHPFPSV  150 (152)
Q Consensus       138 ~~~----~~l~h~~~~~  150 (152)
                      ++.    ++++|+||..
T Consensus       240 ~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         240 GAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             CCCCCHHHHhcCcccCC
Confidence            765    8999999965

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=7.1e-29  Score=185.41  Aligned_cols=137  Identities=22%  Similarity=0.364  Sum_probs=112.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.++..++.|++.||.|||+++|+||||||+||+++.+   +.++++|||..                        
T Consensus       164 ~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~---~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aP  240 (478)
T PTZ00267        164 LPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPT---GIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAP  240 (478)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCC---CcEEEEeCcCceecCCccccccccccCCCccccCH
Confidence            468899999999999999999999999999999999999877   56677777621                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         .+..++.++|+||+||++|++++|+.|+.+.      ....+...+..+. ....+..++.++.+++.+||..+|++
T Consensus       241 E~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~------~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~  313 (478)
T PTZ00267        241 ELWERKRYSKKADMWSLGVILYELLTLHRPFKGP------SQREIMQQVLYGK-YDPFPCPVSSGMKALLDPLLSKNPAL  313 (478)
T ss_pred             hHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCC-CCCCCccCCHHHHHHHHHHhccChhh
Confidence               1223466799999999999999999777554      4455555554433 23456778999999999999999999


Q ss_pred             CcCHHHHhcCCCCC
Q 039869          136 RWTAKHVLAHPFPS  149 (152)
Q Consensus       136 R~~~~~~l~h~~~~  149 (152)
                      ||++.+++.|+|++
T Consensus       314 Rps~~~~l~~~~~~  327 (478)
T PTZ00267        314 RPTTQQLLHTEFLK  327 (478)
T ss_pred             CcCHHHHHhCHHHH
Confidence            99999999999875

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.96  E-value=2.3e-28  Score=171.71  Aligned_cols=139  Identities=26%  Similarity=0.380  Sum_probs=107.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||++||++|++||||+|+||+++.+   +.++++||+..                        
T Consensus       110 ~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~  186 (285)
T cd06648         110 TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEV  186 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCC---CcEEEcccccchhhccCCcccccccCCccccCHHH
Confidence            457889999999999999999999999999999999999877   45566665421                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+|+++|++++|..|+...      +............ .....+..++..+.+++.+||..+|++|
T Consensus       187 ~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  260 (285)
T cd06648         187 ISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE------PPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR  260 (285)
T ss_pred             hcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC------CHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhC
Confidence             1223467899999999999999999777554      3333333333221 1112233478899999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.++++||||+.
T Consensus       261 pt~~~il~~~~~~~  274 (285)
T cd06648         261 ATAAELLNHPFLAK  274 (285)
T ss_pred             cCHHHHccCccccc
Confidence            99999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=6.1e-29  Score=180.53  Aligned_cols=140  Identities=24%  Similarity=0.354  Sum_probs=108.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.||+.||+|||+++|+||||||+||+++.+   +.++++|||...                       
T Consensus       137 ~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE  213 (370)
T cd05621         137 YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKH---GHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPE  213 (370)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC---CCEEEEecccceecccCCceecccCCCCcccCCHH
Confidence            357899999999999999999999999999999999999877   566777776211                       


Q ss_pred             ---c----CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCC--CCChhHHHHHHHhhc
Q 039869           60 ---G----LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS--NISEDGRDFLSKCFI  130 (152)
Q Consensus        60 ---~----~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~l~  130 (152)
                         +    ..++.++|+||+||++|++++|..||.+.      +.......+.........|.  .++..+.+++..||.
T Consensus       214 ~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~  287 (370)
T cd05621         214 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD------SLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLT  287 (370)
T ss_pred             HHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHcc
Confidence               1    11356899999999999999999888665      33444444443333333333  468899999999998


Q ss_pred             cccCC--CcCHHHHhcCCCCCCC
Q 039869          131 RVHQL--RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~--R~~~~~~l~h~~~~~~  151 (152)
                      .++.+  |+++.++++||||+..
T Consensus       288 ~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         288 DREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             CchhccCCCCHHHHhcCcccCCC
Confidence            65543  8899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=2.7e-29  Score=182.62  Aligned_cols=139  Identities=17%  Similarity=0.218  Sum_probs=107.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus        96 ~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~---~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~  172 (376)
T cd05598          96 GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD---GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSME  172 (376)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCC---CCEEEEeCCCCcccccccccccccccccccccccc
Confidence            467899999999999999999999999999999999999876   45566666531                        


Q ss_pred             --------------------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC
Q 039869           59 --------------------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL   94 (152)
Q Consensus        59 --------------------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~   94 (152)
                                                                  .+..++.++|+||+||++|++++|+.||.+.     
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----  247 (376)
T cd05598         173 PSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAD-----  247 (376)
T ss_pred             ccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCC-----
Confidence                                                        1222456799999999999999999887665     


Q ss_pred             CChHHHHHHHHhcCCCCC--CCCCCChhHHHHHHHhhccccCCCc---CHHHHhcCCCCCCC
Q 039869           95 ASRDDLLELIAFSSEVPE--FPSNISEDGRDFLSKCFIRVHQLRW---TAKHVLAHPFPSVD  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~~p~~R~---~~~~~l~h~~~~~~  151 (152)
                       ...+....+........  ....++.++.+++.+|+ .+|.+|+   ++.+++.||||++.
T Consensus       248 -~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         248 -TPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             -CHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence             33333333322222222  23467899999999976 5999999   89999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.4e-28  Score=170.50  Aligned_cols=138  Identities=27%  Similarity=0.352  Sum_probs=108.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------R   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------~   58 (152)
                      ++++..++.++.|++.|+.+||+.+++|+||+|+||+++.+   +.+++++|+.                         .
T Consensus        94 ~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~  170 (274)
T cd06609          94 KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEE---GDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVI  170 (274)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC---CCEEEcccccceeecccccccccccCCccccChhhh
Confidence            68899999999999999999999999999999999999877   4455566541                         1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCC-CChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..++.++|+||+|+++|++++|..|+...      +.......+... ..+..+.. ++.++.+++.+||..+|++||
T Consensus       171 ~~~~~~~~sDv~slG~il~~l~tg~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rp  243 (274)
T cd06609         171 KQSGYDEKADIWSLGITAIELAKGEPPLSDL------HPMRVLFLIPKN-NPPSLEGNKFSKPFKDFVSLCLNKDPKERP  243 (274)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCcccC------chHHHHHHhhhc-CCCCCcccccCHHHHHHHHHHhhCChhhCc
Confidence            2223467899999999999999999776543      223333333222 23334444 888999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      +++++++||||+..
T Consensus       244 t~~~il~~~~~~~~  257 (274)
T cd06609         244 SAKELLKHKFIKKA  257 (274)
T ss_pred             CHHHHhhChhhcCC
Confidence            99999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.1e-28  Score=174.03  Aligned_cols=140  Identities=26%  Similarity=0.309  Sum_probs=108.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.|++.||+|||..|++|+||||+||+++.+   +.++++||+..                        
T Consensus        98 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (316)
T cd05574          98 KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHES---GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVN  174 (316)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCC---CCEEEeecchhhccccccccccccccccccccccc
Confidence            568999999999999999999999999999999999999876   44556665521                        


Q ss_pred             ------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC
Q 039869           59 ------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS  108 (152)
Q Consensus        59 ------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (152)
                                                    .+..++.++|+||||+++|++++|..|+.+.      +.......+....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~------~~~~~~~~~~~~~  248 (316)
T cd05574         175 SIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS------NRDETFSNILKKE  248 (316)
T ss_pred             ccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC------chHHHHHHHhcCC
Confidence                                          1122355799999999999999999777654      3333333332222


Q ss_pred             CCCCCCCCCChhHHHHHHHhhccccCCCcC----HHHHhcCCCCCCC
Q 039869          109 EVPEFPSNISEDGRDFLSKCFIRVHQLRWT----AKHVLAHPFPSVD  151 (152)
Q Consensus       109 ~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~----~~~~l~h~~~~~~  151 (152)
                      .........+..+.+++.+||..+|++||+    +.+++.||||++-
T Consensus       249 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         249 VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence            222222337899999999999999999999    9999999999863

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=3.5e-29  Score=181.17  Aligned_cols=140  Identities=24%  Similarity=0.307  Sum_probs=107.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        95 ~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~---~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~  171 (360)
T cd05627          95 KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAK---GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDF  171 (360)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC---CCEEEeeccCCcccccccccccccccccCCcccc
Confidence            3568999999999999999999999999999999999999876   45566666521                       


Q ss_pred             -------------------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH
Q 039869           59 -------------------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL  101 (152)
Q Consensus        59 -------------------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~  101 (152)
                                                           .+..++.++|+||+||++|+|++|..||.+.      ......
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~------~~~~~~  245 (360)
T cd05627         172 SFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE------TPQETY  245 (360)
T ss_pred             cccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC------CHHHHH
Confidence                                                 2233467899999999999999999777665      344444


Q ss_pred             HHHHhcCCCCCCC--CCCChhHHHHHHHhhccccCCCc---CHHHHhcCCCCCCC
Q 039869          102 ELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRW---TAKHVLAHPFPSVD  151 (152)
Q Consensus       102 ~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~---~~~~~l~h~~~~~~  151 (152)
                      ..+........+|  ..++.++.+++.+++ .+|.+|+   ++.++++||||++.
T Consensus       246 ~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         246 RKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             HHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence            4443322222233  247889999999976 4999998   47899999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.96  E-value=6.2e-28  Score=166.61  Aligned_cols=137  Identities=25%  Similarity=0.322  Sum_probs=108.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +..+++..++.++.|++.||.|||++|++|+||+|+||+++.+   ..++++||+.                        
T Consensus        95 ~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE  171 (256)
T cd08529          95 GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY---DNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPE  171 (256)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCC---CCEEEcccccceeccCccchhhccccCccccCHH
Confidence            3568899999999999999999999999999999999999876   4455666541                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..++.++|+||||++++++++|+.|+...      +.......... ...+..+..++.++.+++.+|++.+|++|
T Consensus       172 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  244 (256)
T cd08529         172 LCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN------NQGALILKIIR-GVFPPVSQMYSQQLAQLIDQCLTKDYRQR  244 (256)
T ss_pred             HhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHc-CCCCCCccccCHHHHHHHHHHccCCcccC
Confidence             12223467899999999999999999776543      33333333332 33344556788999999999999999999


Q ss_pred             cCHHHHhcCCCC
Q 039869          137 WTAKHVLAHPFP  148 (152)
Q Consensus       137 ~~~~~~l~h~~~  148 (152)
                      |++.++++|||+
T Consensus       245 p~~~~ll~~~~~  256 (256)
T cd08529         245 PDTFQLLRNPSL  256 (256)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.96  E-value=2.5e-28  Score=172.60  Aligned_cols=139  Identities=29%  Similarity=0.380  Sum_probs=108.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||++||+.+++|+||+|+||+++.+   +.++++|||..                        
T Consensus       112 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  188 (297)
T cd06659         112 TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEV  188 (297)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC---CcEEEeechhHhhcccccccccceecCccccCHHH
Confidence            468899999999999999999999999999999999999877   45566666522                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+|+++|++++|..|+...      ........+.... .....+..++..+.+++.+||..+|++|
T Consensus       189 ~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~R  262 (297)
T cd06659         189 ISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD------SPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQER  262 (297)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccC
Confidence             1233467799999999999999999777543      3233333322211 1222344678889999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.++++||||.+
T Consensus       263 ps~~~ll~~~~~~~  276 (297)
T cd06659         263 ATAQELLDHPFLLQ  276 (297)
T ss_pred             cCHHHHhhChhhcc
Confidence            99999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=1.3e-28  Score=173.00  Aligned_cols=139  Identities=22%  Similarity=0.287  Sum_probs=108.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||.|||+.+++||||||+||+++.+   +.++++||+..                        
T Consensus        97 ~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~  173 (285)
T cd05632          97 PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDY---GHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVL  173 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCC---CCEEEecCCcceecCCCCcccCCCCCcCccChHHh
Confidence            468999999999999999999999999999999999999876   55677777622                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH--HhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI--AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++|+||+|+++|++++|..||.+.      .........  .........+..++.++.+++.+||+.+|++|
T Consensus       174 ~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  247 (285)
T cd05632         174 NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGR------KEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQR  247 (285)
T ss_pred             cCCCCCcccchHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHc
Confidence            1233466789999999999999999776543      221111111  11122234556788999999999999999999


Q ss_pred             cC-----HHHHhcCCCCCC
Q 039869          137 WT-----AKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~-----~~~~l~h~~~~~  150 (152)
                      |+     +.+++.|+||++
T Consensus       248 ~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05632         248 LGCQEEGAGEVKRHPFFRN  266 (285)
T ss_pred             CCCcccChHHHHcChhhhc
Confidence            99     889999999976

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-29  Score=189.40  Aligned_cols=141  Identities=30%  Similarity=0.404  Sum_probs=120.7

Q ss_pred             CCC--CHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------hc-------
Q 039869            3 KGL--PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------HG-------   60 (152)
Q Consensus         3 ~~l--~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------~~-------   60 (152)
                      +|+  +|..+..|.+||++||.|||++.|||||||-+|+||+  ..++.++|+|||+.             .|       
T Consensus       668 GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP~TETFTGTLQYMAP  745 (1226)
T KOG4279|consen  668 GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP  745 (1226)
T ss_pred             CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCccccccccchhhhCh
Confidence            466  7899999999999999999999999999999999995  44588999999822             11       


Q ss_pred             -------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           61 -------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        61 -------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                             ..|....|||||||.+.||+||++||...-     ++.....++..-...|++|..++.+..+||.+|+.++|
T Consensus       746 EvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elg-----spqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~  820 (1226)
T KOG4279|consen  746 EVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELG-----SPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDP  820 (1226)
T ss_pred             HhhccCCcCCCchhhhhhccceeEeeccCCCCeeecC-----ChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCc
Confidence                   113567999999999999999996665432     66666667766777889999999999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~  150 (152)
                      ..||++.++|+.||++.
T Consensus       821 ~~R~sA~~LL~DpFlq~  837 (1226)
T KOG4279|consen  821 CDRPSAKDLLQDPFLQH  837 (1226)
T ss_pred             ccCccHHHhccCccccc
Confidence            99999999999999975

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=2.8e-28  Score=174.82  Aligned_cols=145  Identities=23%  Similarity=0.419  Sum_probs=105.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +++++..+..++.|++.||.|||+. +++|+||||+||+++.+   +.++++|||..                       
T Consensus        98 ~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~  174 (333)
T cd06650          98 GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL  174 (333)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCC---CCEEEeeCCcchhhhhhccccCCCCccccCHHHh
Confidence            4678999999999999999999975 79999999999999877   45666666521                       


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC--------------------------------------CChHHH
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL--------------------------------------ASRDDL  100 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~  100 (152)
                      .+..++.++|+||+||++|++++|+.|+........                                      ......
T Consensus       175 ~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (333)
T cd06650         175 QGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFEL  254 (333)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHH
Confidence            223346789999999999999999977754321000                                      000001


Q ss_pred             HHHHHhcCCCCCCC-CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          101 LELIAFSSEVPEFP-SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       101 ~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ...+. ....+..+ ..++.++.+++.+||..||++||++.+++.||||+..
T Consensus       255 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         255 LDYIV-NEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             HHHHh-cCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence            11111 11112222 2367889999999999999999999999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1e-28  Score=185.36  Aligned_cols=141  Identities=23%  Similarity=0.263  Sum_probs=101.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh--------------------------h
Q 039869            6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR--------------------------H   59 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~--------------------------~   59 (152)
                      ...+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                          .
T Consensus       265 ~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~  341 (501)
T PHA03210        265 LLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD---GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILA  341 (501)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---CCEEEEeCCCceecCcccccccccccCCcCCCCchhhc
Confidence            356788999999999999999999999999999999877   56677777632                          1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC------------------------CCCCC--
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS------------------------EVPEF--  113 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~--  113 (152)
                      +..++.++|||||||++||++++..++++.....  ....+...+....                        ....+  
T Consensus       342 ~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~  419 (501)
T PHA03210        342 GDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK--PGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPP  419 (501)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC--HHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhh
Confidence            2234577999999999999999986665432210  1111111111000                        00000  


Q ss_pred             ---CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          114 ---PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       114 ---~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                         ...++.++.++|.+||.+||++||++.+++.||||...
T Consensus       420 ~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        420 LIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             HHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence               12356678889999999999999999999999999864

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.95  E-value=3.6e-28  Score=172.33  Aligned_cols=140  Identities=26%  Similarity=0.337  Sum_probs=108.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++..+..++.|++.||.|||+.+++|+||+|+||+++.+   +.++++||+...                       
T Consensus       110 ~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~  186 (307)
T cd06607         110 KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEP---GTVKLADFGSASLVSPANSFVGTPYWMAPEVILAM  186 (307)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCC---CCEEEeecCcceecCCCCCccCCccccCceeeecc
Confidence            468999999999999999999999999999999999999877   556667665211                       


Q ss_pred             -cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           60 -GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        60 -~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                       ...++.++|+||+|+++|++++|..|+.+.      +.................+..++..+.+++.+||..+|++||+
T Consensus       187 ~~~~~~~~sDv~s~G~il~el~tg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  260 (307)
T cd06607         187 DEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS  260 (307)
T ss_pred             CCCCCCcccchHHHHHHHHHHHcCCCCCCCc------cHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC
Confidence             122456899999999999999999776554      3333222232222222223457889999999999999999999


Q ss_pred             HHHHhcCCCCCCC
Q 039869          139 AKHVLAHPFPSVD  151 (152)
Q Consensus       139 ~~~~l~h~~~~~~  151 (152)
                      +.+++.||||+..
T Consensus       261 ~~~il~~~~~~~~  273 (307)
T cd06607         261 SEELLKHRFVLRE  273 (307)
T ss_pred             HHHHhcChhhccc
Confidence            9999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.95  E-value=2e-28  Score=171.45  Aligned_cols=140  Identities=22%  Similarity=0.385  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ..+++..++.++.|++.||+|||++ +++||||||+||+++.+   +.++++||+...                      
T Consensus        98 ~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~  174 (283)
T cd06617          98 LTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRN---GQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPER  174 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC---CCEEEeecccccccccccccccccCCccccChhh
Confidence            4689999999999999999999987 99999999999999877   556666665211                      


Q ss_pred             --c----CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC-CCCChhHHHHHHHhhccc
Q 039869           60 --G----LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP-SNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        60 --~----~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~~~  132 (152)
                        +    ..++.++|+||+||++|++++|+.|+.....    ....+.... . ...+..+ ..++.++.+++.+||..+
T Consensus       175 ~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~~l~~~  248 (283)
T cd06617         175 INPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT----PFQQLKQVV-E-EPSPQLPAEKFSPEFQDFVNKCLKKN  248 (283)
T ss_pred             cCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc----CHHHHHHHH-h-cCCCCCCccccCHHHHHHHHHHccCC
Confidence              0    2235678999999999999999977643210    122222222 1 2223333 357899999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~~  151 (152)
                      |++||++.++++||||+..
T Consensus       249 p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         249 YKERPNYPELLQHPFFELH  267 (283)
T ss_pred             hhhCcCHHHHhcCchhhhc
Confidence            9999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.95  E-value=3.8e-28  Score=168.48  Aligned_cols=136  Identities=26%  Similarity=0.359  Sum_probs=103.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++..++.++.|++.||++||+.|++|+||+|+||+++.+   ..+++.+|+.                         
T Consensus        97 ~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~  173 (267)
T cd06610          97 GGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGED---GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM  173 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC---CCEEEcccchHHHhccCccccccccccccCChhhc
Confidence            458899999999999999999999999999999999999876   3445555441                         


Q ss_pred             ----hh-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC-----CCCChhHHHHHHH
Q 039869           58 ----RH-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP-----SNISEDGRDFLSK  127 (152)
Q Consensus        58 ----~~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~  127 (152)
                          .. +..++.++|+||+|+++|++++|+.|+....     ...........  ..+..+     ..++..+.+++.+
T Consensus       174 ~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~  246 (267)
T cd06610         174 APEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP-----PMKVLMLTLQN--DPPSLETGADYKKYSKSFRKMISL  246 (267)
T ss_pred             ChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC-----hhhhHHHHhcC--CCCCcCCccccccccHHHHHHHHH
Confidence                11 1134667999999999999999997765442     12222222221  111111     3567889999999


Q ss_pred             hhccccCCCcCHHHHhcCCCC
Q 039869          128 CFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       128 ~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ||..+|++||++.++++||||
T Consensus       247 ~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         247 CLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HcCCChhhCcCHHHHhhCCCC
Confidence            999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.95  E-value=3.8e-28  Score=174.75  Aligned_cols=141  Identities=28%  Similarity=0.350  Sum_probs=106.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++..++.++.|++.||++||+.|++|+||+|+||+++.+   +.++++||+...                       
T Consensus       113 ~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (343)
T cd07851         113 QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED---CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC---CCEEEccccccccccccccCCcccccccCHHHHhC
Confidence            468999999999999999999999999999999999999876   556777766221                       


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC-------------------------C---
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV-------------------------P---  111 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~---  111 (152)
                      +..++.++|+||+|+++|++++|+.||.+..     ....+..........                         .   
T Consensus       190 ~~~~~~~~DvwslGv~l~elltg~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (343)
T cd07851         190 WMHYNQTVDIWSVGCIMAELLTGKTLFPGSD-----HIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFK  264 (343)
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHH
Confidence            1234678999999999999999997775542     111111111110000                         0   


Q ss_pred             CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       112 ~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .....++.++.+++.+||+.+|++|||+.++++||||++.
T Consensus       265 ~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         265 EVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             HHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence            1112458889999999999999999999999999999763

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.95  E-value=5.1e-28  Score=167.19  Aligned_cols=135  Identities=26%  Similarity=0.324  Sum_probs=108.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------R   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------~   58 (152)
                      .+++.++..++.|++.||++||+++++|+||+|+||+++.+   ..+++.||+.                         .
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  173 (256)
T cd08218          97 LFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD---GTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEIC  173 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC---CCEEEeeccceeecCcchhhhhhccCCccccCHHHh
Confidence            47889999999999999999999999999999999999876   3455555541                         1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+...+.++|+||+|++++++++|+.|+...      +..+....... ...+..+..++.++.+++.+||+.+|++||+
T Consensus       174 ~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  246 (256)
T cd08218         174 ENRPYNNKSDIWALGCVLYEMCTLKHAFEAG------NMKNLVLKIIR-GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPS  246 (256)
T ss_pred             CCCCCCCccchhHHHHHHHHHHcCCCCccCC------CHHHHHHHHhc-CCCCCCcccCCHHHHHHHHHHhhCChhhCcC
Confidence            2333467899999999999999999766543      33444444332 2334456778999999999999999999999


Q ss_pred             HHHHhcCCCC
Q 039869          139 AKHVLAHPFP  148 (152)
Q Consensus       139 ~~~~l~h~~~  148 (152)
                      +.++++||||
T Consensus       247 ~~~vl~~~~~  256 (256)
T cd08218         247 VNSILEKNFI  256 (256)
T ss_pred             HHHHhhCcCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=2.6e-28  Score=171.44  Aligned_cols=141  Identities=21%  Similarity=0.248  Sum_probs=105.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.+++..+..++.|++.||+|||+ .+++||||||+||+++.+   +.++++||+..                       
T Consensus       102 ~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~  178 (288)
T cd06616         102 SVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRN---GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPER  178 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccC---CcEEEeecchhHHhccCCccccccCccCccCHHH
Confidence            568899999999999999999997 499999999999999876   45666666521                       


Q ss_pred             -hc---CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC---CCCCCCCCChhHHHHHHHhhcc
Q 039869           59 -HG---LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE---VPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 -~~---~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                       .+   ..++.++|+||+|+++|++++|+.||....     ..............   ....+..++.++.+++.+||..
T Consensus       179 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  253 (288)
T cd06616         179 IDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIK  253 (288)
T ss_pred             hccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccC
Confidence             11   135668999999999999999996664331     11111122211111   1122234788999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~~  151 (152)
                      +|++||++.+++.||||+.-
T Consensus       254 ~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         254 DESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             ChhhCcCHHHHhcChhhhch
Confidence            99999999999999999763

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.95  E-value=1.2e-28  Score=179.70  Aligned_cols=138  Identities=20%  Similarity=0.269  Sum_probs=106.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +.+++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||.                         
T Consensus        96 ~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~---g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~  172 (382)
T cd05625          96 GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD---GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMD  172 (382)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---CCEEEeECCCCcccccccccccccccccccccccc
Confidence            468899999999999999999999999999999999999876   4555565553                         


Q ss_pred             -----------------------------------------------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCcc
Q 039869           58 -----------------------------------------------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSF   90 (152)
Q Consensus        58 -----------------------------------------------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~   90 (152)
                                                                     ..+..++.++|+||+||++|+|++|+.||.+. 
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-  251 (382)
T cd05625         173 FSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ-  251 (382)
T ss_pred             ccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC-
Confidence                                                           11233467799999999999999999777654 


Q ss_pred             CCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhccccCCCcC---HHHHhcCCCCCC
Q 039869           91 GRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWT---AKHVLAHPFPSV  150 (152)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~~---~~~~l~h~~~~~  150 (152)
                           +.......+.........  ...+++++.+++.+++ .+|.+|++   +.+++.||||+.
T Consensus       252 -----~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~  310 (382)
T cd05625         252 -----TPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT  310 (382)
T ss_pred             -----CHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence                 333333333222222222  3457899999999876 59999997   999999999976

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.95  E-value=3.6e-29  Score=167.02  Aligned_cols=137  Identities=20%  Similarity=0.168  Sum_probs=104.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeecCCCchhHHHHHHHHhh--------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKDAHEAEISAFLQRH--------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~--------------------   59 (152)
                      +..+++.+++.|+.+|+.||.+||+..  ++||||||+||++...   +...++|||...                    
T Consensus       121 g~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~---~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~  197 (302)
T KOG2345|consen  121 GNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS---GLPVLMDLGSATQAPIQIEGSRQALRLQEWAE  197 (302)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC---CceEEEeccCccccceEeechHHHHHHHHHHH
Confidence            346899999999999999999999998  9999999999999876   666777777211                    


Q ss_pred             -----------------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHH
Q 039869           60 -----------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGR  122 (152)
Q Consensus        60 -----------------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (152)
                                       +...+.++|||||||++|+++.|..||.....    ....+...+.......+-...+++.+.
T Consensus       198 e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----~GgSlaLAv~n~q~s~P~~~~yse~l~  273 (302)
T KOG2345|consen  198 ERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----QGGSLALAVQNAQISIPNSSRYSEALH  273 (302)
T ss_pred             HhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----cCCeEEEeeeccccccCCCCCccHHHH
Confidence                             12226789999999999999999988855432    222222222222222222344899999


Q ss_pred             HHHHHhhccccCCCcCHHHHhcC
Q 039869          123 DFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       123 ~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      +++..||..||.+||++.+++.+
T Consensus       274 ~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  274 QLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             HHHHHHhcCCcccCCCHHHHHHH
Confidence            99999999999999999998753

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.95  E-value=4.1e-28  Score=168.82  Aligned_cols=136  Identities=30%  Similarity=0.416  Sum_probs=104.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-------------------------c
Q 039869            6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-------------------------G   60 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-------------------------~   60 (152)
                      ++..++.++.|++.||+|||+++++|+||||+||+++...  +.++++||+...                         +
T Consensus       106 ~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  183 (268)
T cd06624         106 NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS--GVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDK  183 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CeEEEecchhheecccCCCccccCCCCccccChhhhcc
Confidence            7888999999999999999999999999999999997521  345666665211                         1


Q ss_pred             --CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           61 --LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        61 --~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                        ..++.++|+||+|+++|++++|..|+....     ...............+.++..+++++.+++.+||..+|++||+
T Consensus       184 ~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  258 (268)
T cd06624         184 GPRGYGAPADIWSLGCTIVEMATGKPPFIELG-----EPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRAS  258 (268)
T ss_pred             ccccCCchhhhHHHHHHHHHHHhCCCCCcccc-----ChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCC
Confidence              113567999999999999999996664321     2222222222223345567788999999999999999999999


Q ss_pred             HHHHhcCCCC
Q 039869          139 AKHVLAHPFP  148 (152)
Q Consensus       139 ~~~~l~h~~~  148 (152)
                      +.+++.||||
T Consensus       259 ~~~ll~~~~~  268 (268)
T cd06624         259 AHDLLQDPFL  268 (268)
T ss_pred             HHHHHhCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.95  E-value=4.2e-28  Score=170.00  Aligned_cols=138  Identities=31%  Similarity=0.458  Sum_probs=102.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.|++.||+|||+.+++|+||+|+||+++.+   +.+++++|+...                       
T Consensus        95 ~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  171 (284)
T cd07860          95 SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI  171 (284)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC---CCEEEeeccchhhcccCccccccccccccccCCeE
Confidence            568899999999999999999999999999999999999877   445666655211                       


Q ss_pred             --c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--------------------------
Q 039869           60 --G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--------------------------  110 (152)
Q Consensus        60 --~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------  110 (152)
                        + ..++.++|+||+|+++|++++|+.||.+..     ......+........                          
T Consensus       172 ~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd07860         172 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS-----EIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDF  246 (284)
T ss_pred             EecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCH
Confidence              1 112457999999999999999997775442     111111111100000                          


Q ss_pred             CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ......++.++.+++.+||..||++||++.++++||||
T Consensus       247 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         247 SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            01123467888999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=7.9e-28  Score=168.57  Aligned_cols=138  Identities=28%  Similarity=0.427  Sum_probs=103.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||+.+++|+||||+||+++.+   +.++++||+..                        
T Consensus        95 ~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~  171 (286)
T cd07847          95 RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQ---GQIKLCDFGFARILTGPGDDYTDYVATRWYRAPEL  171 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCC---CcEEECccccceecCCCcccccCcccccccCCHHH
Confidence            468999999999999999999999999999999999999876   45666666521                        


Q ss_pred             -hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cC------------------CCCC-----
Q 039869           59 -HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SS------------------EVPE-----  112 (152)
Q Consensus        59 -~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~~-----  112 (152)
                       .+ ..++.++|+||+|+++|++++|..||.+..     ........... ..                  ..+.     
T Consensus       172 ~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07847         172 LVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS-----DVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE  246 (286)
T ss_pred             HhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccccc
Confidence             11 234568999999999999999996665442     11111111000 00                  0000     


Q ss_pred             ----CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          113 ----FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       113 ----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                          ....++..+.+++.+||..+|++||++.+++.||||
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         247 PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence                013467889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=5.1e-28  Score=169.23  Aligned_cols=142  Identities=27%  Similarity=0.393  Sum_probs=102.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.|++.||++||+.+++|+||+|+||+++.    +.+++++|+..                        
T Consensus        95 ~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (282)
T cd07831          95 RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD----DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECL  170 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC----CCeEEEecccccccccCCCcCCCCCCcccCChhHh
Confidence            46899999999999999999999999999999999999986    34555555411                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---------CChHHHHHHHHhcCC-CCC-----------CCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---------ASRDDLLELIAFSSE-VPE-----------FPSN  116 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~~-----------~~~~  116 (152)
                       .+...+.++|+||+||++|++++|..||.+....+.         ............... ...           ....
T Consensus       171 ~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (282)
T cd07831         171 LTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPN  250 (282)
T ss_pred             hcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHccc
Confidence             122235689999999999999999877755421000         000011001000000 000           1134


Q ss_pred             CChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          117 ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       117 ~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ++.++.+++.+||..+|++||++.++++||||
T Consensus       251 ~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         251 ASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            67899999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.95  E-value=9.5e-28  Score=165.75  Aligned_cols=137  Identities=32%  Similarity=0.466  Sum_probs=108.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..+..++.|++.||++||+.|++|+||+|+||+++.+   +.+++.||+..                        
T Consensus        97 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~  173 (258)
T cd06632          97 GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTN---GVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVI  173 (258)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEEccCccceeccccccccccCCCcceeCHHHh
Confidence            458899999999999999999999999999999999999876   45566665411                        


Q ss_pred             hcCC-CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLL-LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~-~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .... ++.++|+||+|+++|++++|..|+...      ...............+..+..++.++.+++.+||..+|++||
T Consensus       174 ~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  247 (258)
T cd06632         174 AQQGGYGLAADIWSLGCTVLEMATGKPPWSQL------EGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRP  247 (258)
T ss_pred             cCCCCCCchhhhHHHHHHHHHHHhCCCCcccC------cHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCc
Confidence            1112 567799999999999999999665443      222222333333345566777899999999999999999999


Q ss_pred             CHHHHhcCCCC
Q 039869          138 TAKHVLAHPFP  148 (152)
Q Consensus       138 ~~~~~l~h~~~  148 (152)
                      ++.+++.|||+
T Consensus       248 ~~~~~l~~~~~  258 (258)
T cd06632         248 TAAELLEHPFV  258 (258)
T ss_pred             CHHHHhcCCCC
Confidence            99999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.95  E-value=4.4e-28  Score=170.02  Aligned_cols=138  Identities=22%  Similarity=0.320  Sum_probs=105.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.|++.||.|||+.+++|+||||+||+++.+   +.++++||+...                       
T Consensus       119 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (286)
T cd06638         119 ERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEV  195 (286)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCC---CCEEEccCCceeecccCCCccccccCCCcccChhh
Confidence            467889999999999999999999999999999999999877   446666665211                       


Q ss_pred             -------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           60 -------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        60 -------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                             +..++.++|+||+||++|++++|+.|+....     ..................+..++..+.+++.+||..+
T Consensus       196 ~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  270 (286)
T cd06638         196 IACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH-----PMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKD  270 (286)
T ss_pred             hchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc-----hhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCC
Confidence                   1224568999999999999999997765542     1122211111111122234556788999999999999


Q ss_pred             cCCCcCHHHHhcCCCC
Q 039869          133 HQLRWTAKHVLAHPFP  148 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~  148 (152)
                      |++||++.++++|+||
T Consensus       271 p~~Rps~~ell~~~~~  286 (286)
T cd06638         271 YEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cccCCCHHHHhhcccC
Confidence            9999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=7.8e-28  Score=169.73  Aligned_cols=139  Identities=25%  Similarity=0.347  Sum_probs=103.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++..++.++.||+.||+|||++|++|+||+|+||+++.+   +.++++||+..                         
T Consensus        98 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~  174 (298)
T cd07841          98 VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASD---GVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELL  174 (298)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCC---CCEEEccceeeeeccCCCccccccccceeeeCHHHH
Confidence            68999999999999999999999999999999999999877   45666666511                         


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC--------------------CC-----C
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE--------------------VP-----E  112 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~-----~  112 (152)
                       .+..++.++|+||+||++|++++|.+++.+..     ....+.........                    .+     .
T Consensus       175 ~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (298)
T cd07841         175 FGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-----DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQ  249 (298)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-----cHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhh
Confidence             11234567999999999999999975444332     11111111110000                    00     0


Q ss_pred             CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .....+.++.+++.+||..+|++||++.++++||||++
T Consensus       250 ~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~  287 (298)
T cd07841         250 IFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN  287 (298)
T ss_pred             hcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence            12345788999999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.95  E-value=5.9e-28  Score=171.09  Aligned_cols=141  Identities=23%  Similarity=0.310  Sum_probs=109.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .+++++..+..++.|++.||+|||+++++|+||||+||+++.+   +.+++.||+..                       
T Consensus        95 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  171 (305)
T cd05609          95 IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREF  171 (305)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCC---CCEEEeeCCCccccCcCccccccccccccchhhc
Confidence            3568899999999999999999999999999999999999876   44555555421                       


Q ss_pred             -----------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChh
Q 039869           59 -----------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISED  120 (152)
Q Consensus        59 -----------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  120 (152)
                                       .+..++.++|+||+|+++|++++|..||.+.      ...++........ ..+..+..++.+
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (305)
T cd05609         172 LDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD------TPEELFGQVISDDIEWPEGDEALPAD  245 (305)
T ss_pred             cccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcccCCCCccccCCHH
Confidence                             1223456799999999999999999887654      3444444433322 222333367899


Q ss_pred             HHHHHHHhhccccCCCcC---HHHHhcCCCCCCC
Q 039869          121 GRDFLSKCFIRVHQLRWT---AKHVLAHPFPSVD  151 (152)
Q Consensus       121 ~~~ll~~~l~~~p~~R~~---~~~~l~h~~~~~~  151 (152)
                      +.+++.+||+.+|++||+   +.++++||||...
T Consensus       246 ~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         246 AQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             HHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence            999999999999999997   7899999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=1e-27  Score=168.47  Aligned_cols=133  Identities=16%  Similarity=0.140  Sum_probs=107.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      +.+++.....++.|++.||.+||. .+++||||||+||+++.+   +.++++|||...                      
T Consensus       117 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~  193 (283)
T PHA02988        117 KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN---YKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLN  193 (283)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCC---CcEEEcccchHhhhccccccccCcccccCHHHhh
Confidence            567889999999999999999997 599999999999999887   455666665221                      


Q ss_pred             c--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 G--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      +  ..++.++|+|||||++|++++|+.||.+.      +..++...+......+..+..++.++.+++.+||..||++||
T Consensus       194 ~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp  267 (283)
T PHA02988        194 DIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL------TTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRP  267 (283)
T ss_pred             hccccccchhhhhHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCc
Confidence            1  34567899999999999999999777654      445555555444455566777899999999999999999999


Q ss_pred             CHHHHhc
Q 039869          138 TAKHVLA  144 (152)
Q Consensus       138 ~~~~~l~  144 (152)
                      ++.++++
T Consensus       268 s~~ell~  274 (283)
T PHA02988        268 NIKEILY  274 (283)
T ss_pred             CHHHHHH
Confidence            9999874

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.3e-28  Score=167.98  Aligned_cols=139  Identities=22%  Similarity=0.321  Sum_probs=108.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh---------------------hcC
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR---------------------HGL   61 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~---------------------~~~   61 (152)
                      +++++..+..++.|++.||.|||+.+++|+||+|+||+++.+   +.+++++|+..                     .+.
T Consensus        92 ~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~  168 (260)
T cd05611          92 GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT---GHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGV  168 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC---CcEEEeecccceeccccccCCCCcCccChhhhcCC
Confidence            568899999999999999999999999999999999999876   55667666521                     122


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--CCCCCCCCCChhHHHHHHHhhccccCCCc--
Q 039869           62 LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--EVPEFPSNISEDGRDFLSKCFIRVHQLRW--  137 (152)
Q Consensus        62 ~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~l~~~p~~R~--  137 (152)
                      .++.++|+||+|+++|++++|..|+...      +............  ........++.++.+++.+||..+|++||  
T Consensus       169 ~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         169 GDDKMSDWWSLGCVIFEFLFGYPPFHAE------TPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             CCcchhhhHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCC
Confidence            2467899999999999999999776543      3333333332222  12233446889999999999999999999  


Q ss_pred             -CHHHHhcCCCCCC
Q 039869          138 -TAKHVLAHPFPSV  150 (152)
Q Consensus       138 -~~~~~l~h~~~~~  150 (152)
                       ++.+++.||||+.
T Consensus       243 ~~~~~~l~~~~~~~  256 (260)
T cd05611         243 NGYQEIKSHPFFKS  256 (260)
T ss_pred             CcHHHHHcChHhhc
Confidence             4579999999976

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=4.1e-28  Score=174.05  Aligned_cols=146  Identities=26%  Similarity=0.323  Sum_probs=104.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||++||+.|++||||||+||+++.+   +.++++||+..                        
T Consensus       101 ~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  177 (336)
T cd07849         101 QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN---CDLKICDFGLARIADPEHDHTGFLTEYVATRWYRA  177 (336)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC---CCEEECcccceeeccccccccCCcCCcCcCCCccC
Confidence            568999999999999999999999999999999999999876   45556665511                        


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCC----------CCChHHHHHH--------HHhcCCCCC---
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG----------LASRDDLLEL--------IAFSSEVPE---  112 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~--------~~~~~~~~~---  112 (152)
                           .+..++.++|+||+|+++|++++|+.|+.+.....          ..........        .......+.   
T Consensus       178 PE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (336)
T cd07849         178 PEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPW  257 (336)
T ss_pred             hHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccH
Confidence                 11234567999999999999999997775432100          0000000000        000000000   


Q ss_pred             --CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 --FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 --~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                        .....+.++.+++.+||..+|++||++.++++||||+..
T Consensus       258 ~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         258 NKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence              113457889999999999999999999999999999753

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=3.7e-28  Score=172.57  Aligned_cols=140  Identities=24%  Similarity=0.320  Sum_probs=101.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||+++++|+||||+||+++.+   +.+++.+|+..                        
T Consensus        96 ~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (314)
T cd08216          96 EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD---GKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNL  172 (314)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC---CceEEecCccceeeccccccccccccccccccccc
Confidence            357899999999999999999999999999999999999876   33444444310                        


Q ss_pred             --------hc--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--------------------
Q 039869           59 --------HG--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--------------------  108 (152)
Q Consensus        59 --------~~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  108 (152)
                              .+  ..++.++|+||+||++|++++|..||....     .............                    
T Consensus       173 ~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (314)
T cd08216         173 PWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMP-----ATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSR  247 (314)
T ss_pred             cccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhccCccccccCchhhhcCCcCccc
Confidence                    11  224567999999999999999997765432     1111111111000                    


Q ss_pred             -----------CCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          109 -----------EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       109 -----------~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                 ........++.++.+++..||..+|++||++.++++||||++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~  300 (314)
T cd08216         248 SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ  300 (314)
T ss_pred             ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence                       000111224567889999999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.95  E-value=9.2e-28  Score=166.83  Aligned_cols=142  Identities=27%  Similarity=0.392  Sum_probs=109.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.+||++|++|+||+|+||+++.++  ..++++||+..                        
T Consensus        98 ~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (268)
T cd06630          98 GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG--QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFM  175 (268)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEEcccccccccccccccCCcccccccccccee
Confidence            5688999999999999999999999999999999999997542  23556665421                        


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                           .+..++.++|+||+|+++|++++|..|+.....   ................+..+..++.++.+++..||..+|
T Consensus       176 ~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  252 (268)
T cd06630         176 APEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH---SNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQP  252 (268)
T ss_pred             CHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---cchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCc
Confidence                 123346779999999999999999976643321   122222323333344556677789999999999999999


Q ss_pred             CCCcCHHHHhcCCCCC
Q 039869          134 QLRWTAKHVLAHPFPS  149 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~  149 (152)
                      ++||++.+++.||||+
T Consensus       253 ~~R~~~~~ll~~~~~~  268 (268)
T cd06630         253 EDRPPSRELLKHPVFR  268 (268)
T ss_pred             ccCcCHHHHhcCcccC
Confidence            9999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=6e-28  Score=167.86  Aligned_cols=137  Identities=26%  Similarity=0.364  Sum_probs=103.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .+++++.+++.++.|++.||.|||+.|++|+||||+||+++.+   ..+++.|||..                       
T Consensus       100 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  176 (267)
T cd06645         100 TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDN---GHVKLADFGVSAQITATIAKRKSFIGTPYWMAPE  176 (267)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC---CCEEECcceeeeEccCcccccccccCcccccChh
Confidence            3568999999999999999999999999999999999999876   44555565521                       


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC-C--CCCCChhHHHHHHHhhc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE-F--PSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~ll~~~l~  130 (152)
                           .+..++.++|+||+||++|++++|..|+....     ...... ........+. .  ...++..+.+++.+||.
T Consensus       177 ~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  250 (267)
T cd06645         177 VAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH-----PMRALF-LMTKSNFQPPKLKDKMKWSNSFHHFVKMALT  250 (267)
T ss_pred             hhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc-----chhhHH-hhhccCCCCCcccccCCCCHHHHHHHHHHcc
Confidence                 12234567999999999999999997765542     112222 1111121111 1  12467889999999999


Q ss_pred             cccCCCcCHHHHhcCCC
Q 039869          131 RVHQLRWTAKHVLAHPF  147 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~  147 (152)
                      .+|++||++.++++|||
T Consensus       251 ~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         251 KNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CCchhCcCHHHHhcCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.95  E-value=1.2e-27  Score=170.24  Aligned_cols=141  Identities=26%  Similarity=0.361  Sum_probs=109.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++.+++.++.|++.+|+|||++|++|+||+|+||+++.+   +.++++||+..                       
T Consensus       115 ~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~---~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~  191 (313)
T cd06633         115 KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP---GQVKLADFGSASKSSPANSFVGTPYWMAPEVILA  191 (313)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC---CCEEEeecCCCcccCCCCCccccccccChhhccc
Confidence            3468899999999999999999999999999999999999876   44566665411                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+|+++|++++|..|+...      +....................++..+.+++.+||+.+|++||
T Consensus       192 ~~~~~~~~~sDv~slGvil~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp  265 (313)
T cd06633         192 MDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERP  265 (313)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence             1223456789999999999999999776554      333333333322222223345778899999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.+++.||||+..
T Consensus       266 ~~~~~l~~~~~~~~  279 (313)
T cd06633         266 ASAELLRHDFVRRD  279 (313)
T ss_pred             CHHHHhcCcccCCC
Confidence            99999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.95  E-value=4e-28  Score=175.21  Aligned_cols=142  Identities=22%  Similarity=0.372  Sum_probs=101.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------hhc
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------RHG   60 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~~~   60 (152)
                      +++..+..++.|++.||++||.+|++|+||||+||+++.+   +.++++|||.                        ..+
T Consensus       115 l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  191 (353)
T cd07850         115 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG  191 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC---CCEEEccCccceeCCCCCCCCCCcccccccCHHHHhC
Confidence            7888999999999999999999999999999999999877   4566666652                        223


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---------CChHHHHH--------HHHhcCCC---------C---
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---------ASRDDLLE--------LIAFSSEV---------P---  111 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~--------~~~~~~~~---------~---  111 (152)
                      ..++.++|+||+||++|++++|+.||........         ....++..        ........         +   
T Consensus       192 ~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (353)
T cd07850         192 MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVL  271 (353)
T ss_pred             CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccc
Confidence            3456789999999999999999977754321000         00000000        00000000         0   


Q ss_pred             ------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          112 ------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       112 ------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                            ..+...+..+.+++.+||..||++||++.+++.||||+
T Consensus       272 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         272 FPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             cCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence                  00123456789999999999999999999999999886

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=7.1e-28  Score=166.81  Aligned_cols=136  Identities=28%  Similarity=0.357  Sum_probs=103.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.++..++.|++.||+|||+.+++|+||+|+||+++.+   +.++++||+.                         
T Consensus        96 ~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~  172 (262)
T cd06613          96 GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTED---GDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEV  172 (262)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCC---CCEEECccccchhhhhhhhccccccCCccccCchh
Confidence            578999999999999999999999999999999999999876   4455555541                         


Q ss_pred             hhcC---CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC---CCCCCCCCCChhHHHHHHHhhcc
Q 039869           58 RHGL---LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS---EVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        58 ~~~~---~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                      ..+.   .++.++|+||+|+++|++++|+.|+...      .............   .....+..++.++.+++.+||..
T Consensus       173 ~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  246 (262)
T cd06613         173 AAVERKGGYDGKCDIWALGITAIELAELQPPMFDL------HPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTK  246 (262)
T ss_pred             hcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCC
Confidence            1112   3456799999999999999999777554      2222222222221   11122344678899999999999


Q ss_pred             ccCCCcCHHHHhcCCC
Q 039869          132 VHQLRWTAKHVLAHPF  147 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~  147 (152)
                      +|..||++.+++.|+|
T Consensus       247 ~p~~Rpt~~~il~~~~  262 (262)
T cd06613         247 DPKKRPTATKLLQHPF  262 (262)
T ss_pred             ChhhCCCHHHHhcCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=4.3e-28  Score=176.18  Aligned_cols=140  Identities=22%  Similarity=0.318  Sum_probs=107.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||...                       
T Consensus       137 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~---~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE  213 (371)
T cd05622         137 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE  213 (371)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCC---CCEEEEeCCceeEcCcCCcccccCcccCccccCHH
Confidence            457889999999999999999999999999999999999877   556666665211                       


Q ss_pred             ---c----CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhc
Q 039869           60 ---G----LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFI  130 (152)
Q Consensus        60 ---~----~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~  130 (152)
                         +    ..++.++|+||+||++|+|++|..||.+.      +.......+........+  +..++..+.+++..||.
T Consensus       214 ~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  287 (371)
T cd05622         214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT  287 (371)
T ss_pred             HHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC------CHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC
Confidence               0    11456899999999999999999887665      444444444333322222  34689999999999998


Q ss_pred             cccCC--CcCHHHHhcCCCCCCC
Q 039869          131 RVHQL--RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~--R~~~~~~l~h~~~~~~  151 (152)
                      ..+.+  |+++.++++|+||++.
T Consensus       288 ~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         288 DREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             ChhhhcCCCCHHHHhcCcccCCC
Confidence            44433  7799999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=1.3e-27  Score=169.65  Aligned_cols=141  Identities=27%  Similarity=0.338  Sum_probs=110.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      +.++++.++..++.|++.||.|||..+++|+||+|+||+++.+   +.++++||+...                      
T Consensus       109 ~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~  185 (308)
T cd06634         109 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPANXFVGTPYWMAPEVILA  185 (308)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC---CcEEECCcccceeecCcccccCCccccCHHHHhh
Confidence            3468899999999999999999999999999999999999876   556666765211                      


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                        +...+.++|+||+||++|++++|..|+...      +.................+..++..+.+++.+||..+|++||
T Consensus       186 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp  259 (308)
T cd06634         186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP  259 (308)
T ss_pred             cccCCCCcccchHHHHHHHHHHHcCCCCCccc------cHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCC
Confidence              123456799999999999999999776554      333333333333322223456888899999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.+++.|||+...
T Consensus       260 ~~~~ll~~~~~~~~  273 (308)
T cd06634         260 TSEVLLKHRFVLRE  273 (308)
T ss_pred             CHHHHhhCcccccc
Confidence            99999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=7.2e-28  Score=169.02  Aligned_cols=140  Identities=24%  Similarity=0.455  Sum_probs=109.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc---------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------------   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~---------------------   60 (152)
                      ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.+   +.++++|||....                     
T Consensus        97 ~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~  173 (286)
T cd06622          97 EGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGN---GQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERI  173 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCC---CCEEEeecCCcccccCCccccCCCccCccCcchh
Confidence            368999999999999999999996 599999999999999876   5667777762210                     


Q ss_pred             --------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH--HhcCCCCCCCCCCChhHHHHHHHhhc
Q 039869           61 --------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI--AFSSEVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        61 --------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                              ..++.++|+||+||++|++++|+.||....      ........  ......+..+..++.++.+++.+||.
T Consensus       174 ~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  247 (286)
T cd06622         174 KSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET------YANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLN  247 (286)
T ss_pred             cCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc------hhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcc
Confidence                    112567899999999999999997765432      12221111  11233445667799999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .+|++||++.+++.||||...
T Consensus       248 ~~p~~Rp~~~~l~~~~~~~~~  268 (286)
T cd06622         248 KIPNRRPTYAQLLEHPWLVKY  268 (286)
T ss_pred             cCcccCCCHHHHhcChhhhhc
Confidence            999999999999999999653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.95  E-value=8.6e-28  Score=168.08  Aligned_cols=138  Identities=27%  Similarity=0.398  Sum_probs=109.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.++..++.|++.||++||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus        96 ~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~  172 (277)
T cd06640          96 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV  172 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC---CCEEEcccccceeccCCccccccccCcccccCHhH
Confidence            468889999999999999999999999999999999999876   44566666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+...+.++|+||+|+++|++++|..|+...      .......... ....+..+..++..+.+++.+||..+|++||
T Consensus       173 ~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (277)
T cd06640         173 IQQSAYDSKADIWSLGITAIELAKGEPPNSDM------HPMRVLFLIP-KNNPPTLTGEFSKPFKEFIDACLNKDPSFRP  245 (277)
T ss_pred             hccCCCccHHHHHHHHHHHHHHHHCCCCCCCc------ChHhHhhhhh-cCCCCCCchhhhHHHHHHHHHHcccCcccCc
Confidence             2233467899999999999999999766544      2222222222 2234455667888999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.+++.|+||..
T Consensus       246 ~~~~il~~~~~~~  258 (277)
T cd06640         246 TAKELLKHKFIVK  258 (277)
T ss_pred             CHHHHHhChHhhh
Confidence            9999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.95  E-value=1.6e-27  Score=165.05  Aligned_cols=137  Identities=18%  Similarity=0.213  Sum_probs=109.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH-----hCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIH-----SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh-----~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------   58 (152)
                      +.++++..++.++.|++.||++||     +.+++|+||+|+||+++.+   +.++++|++..                  
T Consensus        99 ~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~  175 (265)
T cd08217          99 RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN---NNVKLGDFGLAKILGHDSSFAKTYVGTPY  175 (265)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC---CCEEEecccccccccCCcccccccccCCC
Confidence            356889999999999999999999     8999999999999999876   55666666521                  


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                             .+...+.++|+||+|+++|++++|+.|+...      +...+...+... ..+..+..++.++.+++.+|+..
T Consensus       176 ~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~  248 (265)
T cd08217         176 YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTAR------NQLQLASKIKEG-KFRRIPYRYSSELNEVIKSMLNV  248 (265)
T ss_pred             ccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCc------CHHHHHHHHhcC-CCCCCccccCHHHHHHHHHHccC
Confidence                   1122356789999999999999999666543      334444444332 34456778899999999999999


Q ss_pred             ccCCCcCHHHHhcCCCC
Q 039869          132 VHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~  148 (152)
                      +|++||++.++++|||+
T Consensus       249 ~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         249 DPDKRPSTEELLQLPLI  265 (265)
T ss_pred             CcccCCCHHHHhhCCCC
Confidence            99999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=1.1e-27  Score=171.99  Aligned_cols=134  Identities=16%  Similarity=0.259  Sum_probs=104.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..+..++.||+.||+|||+++|+||||||+||+++.+   ..++++|||...                       
T Consensus       168 ~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~---~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         168 EPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC---CcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence            478999999999999999999999999999999999999876   556777776221                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++|+||+||++|++++ |..|+.+..     ....+..... .......+...+.++.+++..||+.+|+
T Consensus       245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~  318 (337)
T cd05054         245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ-----IDEEFCRRLK-EGTRMRAPEYATPEIYSIMLDCWHNNPE  318 (337)
T ss_pred             HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC-----ccHHHHHHHh-ccCCCCCCccCCHHHHHHHHHHccCChh
Confidence                2224667999999999999998 886665532     1122222222 2233445567889999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.++++|
T Consensus       319 ~RPs~~ell~~  329 (337)
T cd05054         319 DRPTFSELVEI  329 (337)
T ss_pred             hCcCHHHHHHH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=1.2e-27  Score=167.55  Aligned_cols=133  Identities=20%  Similarity=0.310  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.++..++.|++.||.|||+++++|+||||+||+++.+   ..++++||+..                        
T Consensus       119 ~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~---~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05048         119 SSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG---LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPP  195 (283)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC---CcEEECCCcceeeccccccccccCCCcccccccCH
Confidence            568889999999999999999999999999999999999876   45666666521                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+|||||++||+++ |..|+.+.      ...++...+... ..+..+..++.++.+++..||+.+|+
T Consensus       196 E~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~~~~l~~~c~~~~p~  268 (283)
T cd05048         196 EAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF------SNQEVIEMIRSR-QLLPCPEDCPARVYALMIECWNEIPA  268 (283)
T ss_pred             HHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcC-CcCCCcccCCHHHHHHHHHHccCChh
Confidence               12234667999999999999998 88777665      445555555433 33456778999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       269 ~Rp~~~~i~~~  279 (283)
T cd05048         269 RRPRFKDIHTR  279 (283)
T ss_pred             hCcCHHHHHHH
Confidence            99999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=1.1e-27  Score=168.64  Aligned_cols=138  Identities=23%  Similarity=0.272  Sum_probs=110.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~   60 (152)
                      +++++..+..++.|++.||.+||++|++|+||+|+||+++.+   +.+++.+|+..                      .+
T Consensus        96 ~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~  172 (290)
T cd05580          96 GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSD---GYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILS  172 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC---CCEEEeeCCCccccCCCCCCCCCCccccChhhhcC
Confidence            568999999999999999999999999999999999999877   45566666521                      12


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc---
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW---  137 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~---  137 (152)
                      ...+.++|+||+|+++|++++|+.|+...      +.....+.+.  .....++..++..+.+++.+||..+|++|+   
T Consensus       173 ~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~  244 (290)
T cd05580         173 KGYGKAVDWWALGILIYEMLAGYPPFFDD------NPIQIYEKIL--EGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNL  244 (290)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHh--cCCccCCccCCHHHHHHHHHHccCCHHHccCcc
Confidence            23356799999999999999999666543      3333333333  233456677899999999999999999999   


Q ss_pred             --CHHHHhcCCCCCCC
Q 039869          138 --TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 --~~~~~l~h~~~~~~  151 (152)
                        ++.+++.||||+..
T Consensus       245 ~~~~~~l~~~~~~~~~  260 (290)
T cd05580         245 KNGVNDIKNHPWFAGI  260 (290)
T ss_pred             cCCHHHHHcCcccccC
Confidence              89999999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=4.8e-28  Score=174.50  Aligned_cols=138  Identities=21%  Similarity=0.277  Sum_probs=120.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      +..|+++.+..++.|++.||.|||+++|+|||||.+||++...   +.++++|||                         
T Consensus       100 ~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~---~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPE  176 (426)
T KOG0589|consen  100 GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKD---KKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPE  176 (426)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcccc---CceeecchhhhhhcCCchhhhheecCCCcccCHH
Confidence            3568999999999999999999999999999999999999877   666899998                         


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           57 QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        57 ~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ...+.+|..++|+|||||++||+++-+.+|-+.      +...+...+.... ..++|..++.++..++..||..+|..|
T Consensus       177 il~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~------~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~R  249 (426)
T KOG0589|consen  177 ILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS------NMSELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHR  249 (426)
T ss_pred             HhCCCCCCccCcchhhcchHHHHHhcccccCcc------chHHHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccC
Confidence            334555688999999999999999999777665      7777777776555 566889999999999999999999999


Q ss_pred             cCHHHHhcCCCCC
Q 039869          137 WTAKHVLAHPFPS  149 (152)
Q Consensus       137 ~~~~~~l~h~~~~  149 (152)
                      |++.++|.+|..+
T Consensus       250 Psa~~LL~~P~l~  262 (426)
T KOG0589|consen  250 PSALELLRRPHLL  262 (426)
T ss_pred             CCHHHHhhChhhh
Confidence            9999999998765

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.95  E-value=9.3e-28  Score=166.17  Aligned_cols=139  Identities=23%  Similarity=0.342  Sum_probs=107.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..+..++.|++.||+|||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus        88 ~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (265)
T cd05579          88 GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN---GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGT  164 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC---CCEEEEecccchhcccCcccccccccccccCcccC
Confidence            468899999999999999999999999999999999999877   45556555421                        


Q ss_pred             ---------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhh
Q 039869           59 ---------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCF  129 (152)
Q Consensus        59 ---------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l  129 (152)
                               .+...+.++|+||+|+++|++++|..|+...      ......................+..+.+++.+||
T Consensus       165 ~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  238 (265)
T cd05579         165 PDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGE------TPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLL  238 (265)
T ss_pred             ccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHh
Confidence                     1112356799999999999999999666443      4444444443323222222224899999999999


Q ss_pred             ccccCCCcCH---HHHhcCCCCCC
Q 039869          130 IRVHQLRWTA---KHVLAHPFPSV  150 (152)
Q Consensus       130 ~~~p~~R~~~---~~~l~h~~~~~  150 (152)
                      +.+|++||++   .++++||||..
T Consensus       239 ~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         239 VPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             cCCHhhcCCCccHHHHhcCccccC
Confidence            9999999999   99999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.95  E-value=1.3e-27  Score=171.84  Aligned_cols=141  Identities=24%  Similarity=0.358  Sum_probs=102.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.|++.||.|||+.|++||||||+||+++...  ..+++++|+..                        
T Consensus       109 ~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  186 (342)
T cd07854         109 GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED--LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRS  186 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC--ceEEECCcccceecCCccccccccccccccccccC
Confidence            4688999999999999999999999999999999999997431  23444444411                        


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH---------------------h-cCCCC
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA---------------------F-SSEVP  111 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~  111 (152)
                           .+..++.++|+||+||++|++++|+.||.+...     .........                     . ....+
T Consensus       187 PE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (342)
T cd07854         187 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE-----LEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEP  261 (342)
T ss_pred             HHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhccccc
Confidence                 112345679999999999999999988865421     111110000                     0 00000


Q ss_pred             -----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 -----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 -----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                           .....++.++.+++.+||..||++||++.+++.||||+.
T Consensus       262 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         262 RRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             CCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence                 112357788999999999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-27  Score=169.14  Aligned_cols=143  Identities=21%  Similarity=0.372  Sum_probs=120.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC-CCc--hhHHHHHHHHh--------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-KDA--HEAEISAFLQR--------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~-~~~--~~~~l~~~~~~--------------------   58 (152)
                      ++.+++..++.++.|++.||++||+++|+||||||+|||+..+ ...  -.+|++|||..                    
T Consensus       103 ~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMA  182 (429)
T KOG0595|consen  103 RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMA  182 (429)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccC
Confidence            4579999999999999999999999999999999999999865 322  56789999822                    


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC-CCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          ....|+.|.|+||+|+++|++++|+.||...      ...++...+.++... +..+...+....+++...+..+|
T Consensus       183 PEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~------t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~  256 (429)
T KOG0595|consen  183 PEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE------TPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNP  256 (429)
T ss_pred             HHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc------CHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCc
Confidence                2444688999999999999999999777666      667777777666644 45667788889999999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~  150 (152)
                      ..|.++.+.+.|++...
T Consensus       257 ~~~~~~~~~~~~~~l~~  273 (429)
T KOG0595|consen  257 KDRISFEDFFDHPFLAA  273 (429)
T ss_pred             cccCchHHhhhhhhccc
Confidence            99999999999998764

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=1e-27  Score=170.17  Aligned_cols=145  Identities=26%  Similarity=0.448  Sum_probs=105.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------~   58 (152)
                      +++++..+..++.|++.||.|||+ .+++|+||||+||+++.+   +.++++||+.                       .
T Consensus        94 ~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~  170 (308)
T cd06615          94 GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL  170 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC---CcEEEccCCCcccccccccccCCCCcCccChhHh
Confidence            568899999999999999999997 699999999999999877   4456666652                       1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC------------------------------ChHHHHHHHHhcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA------------------------------SRDDLLELIAFSS  108 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~  108 (152)
                      .+..++.++|+||+|+++|++++|+.|+.........                              ...+..... ...
T Consensus       171 ~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  249 (308)
T cd06615         171 QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYI-VNE  249 (308)
T ss_pred             cCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHH-hcC
Confidence            2333467799999999999999999776533210000                              000011111 111


Q ss_pred             CCCCCC-CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          109 EVPEFP-SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       109 ~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ..+..+ ..++.++.+++.+||..+|++||++.+++.||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         250 PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence            122222 2367889999999999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.95  E-value=1.1e-27  Score=167.53  Aligned_cols=140  Identities=24%  Similarity=0.368  Sum_probs=108.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      .+++..+..++.|++.||.|||++|++|+||+|+||+++.+   +.++++||+..                        .
T Consensus        91 ~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~  167 (277)
T cd05577          91 GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH---GNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQ  167 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC---CCEEEccCcchhhhccCCccccccCCCCcCCHHHhc
Confidence            68999999999999999999999999999999999999877   45566666521                        1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc--
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW--  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~--  137 (152)
                      +..++.++|+||+|+++|++++|+.|+......  .....+....  .......+..+++++.+++.+||..+|++||  
T Consensus       168 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  243 (277)
T cd05577         168 GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK--VEKEELKRRT--LEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGC  243 (277)
T ss_pred             CCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc--ccHHHHHhcc--ccccccCCccCCHHHHHHHHHHccCChhHccCC
Confidence            223466799999999999999999776554211  1122222221  1223345667899999999999999999999  


Q ss_pred             ---CHHHHhcCCCCCC
Q 039869          138 ---TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ---~~~~~l~h~~~~~  150 (152)
                         ++.+++.||||..
T Consensus       244 ~~~~~~~ll~h~~~~~  259 (277)
T cd05577         244 RGGSADEVREHPLFKD  259 (277)
T ss_pred             CcccHHHHHhChhhhc
Confidence               8888999999965

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=1.1e-27  Score=167.81  Aligned_cols=139  Identities=24%  Similarity=0.370  Sum_probs=102.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++.+++.++.|++.||+|||+.|++|+||+|+||+++.+   +.++++||+...                       
T Consensus        94 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  170 (286)
T cd07832          94 RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD---GVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE  170 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC---CcEEEeeeeecccccCCCCCccccccCcccccCce
Confidence            568999999999999999999999999999999999999876   455666665111                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-----------------------CC--
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-----------------------EV--  110 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~--  110 (152)
                          ...++.++|+||+|+++|++++|.+++.+..     ....+........                       ..  
T Consensus       171 ~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T cd07832         171 LLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-----DIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPI  245 (286)
T ss_pred             eeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-----HHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcc
Confidence                1123568999999999999999974443331     1111111111000                       00  


Q ss_pred             --CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          111 --PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       111 --~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                        .......+.++.+++.+||..+|++||++.+++.||||.
T Consensus       246 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         246 PLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             hHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence              011134578899999999999999999999999999983

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.95  E-value=1e-27  Score=171.90  Aligned_cols=146  Identities=25%  Similarity=0.298  Sum_probs=106.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||.++++|+||||+||+++.+   +.++++||+..                       
T Consensus       101 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y  177 (334)
T cd07855         101 DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNED---CELRIGDFGMARGLSSSPTEHKYFMTEYVATRWY  177 (334)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC---CcEEecccccceeecccCcCCCcccccccccccc
Confidence            4568999999999999999999999999999999999999877   55667776521                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---------CCh---------HHHHHHHHhcCCCCCC
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---------ASR---------DDLLELIAFSSEVPEF  113 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---------~~~---------~~~~~~~~~~~~~~~~  113 (152)
                             ....++.++|+||+|+++|++++|+.||.+......         ...         ..+.............
T Consensus       178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (334)
T cd07855         178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPV  257 (334)
T ss_pred             cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCC
Confidence                   012245679999999999999999977755421000         000         0000111111111111


Q ss_pred             -----CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          114 -----PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       114 -----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                           ....+.++.+++.+||+.+|++||++.+++.||||++
T Consensus       258 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         258 PWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ  299 (334)
T ss_pred             CHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence                 2446889999999999999999999999999999964

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.95  E-value=1.6e-27  Score=164.21  Aligned_cols=138  Identities=37%  Similarity=0.521  Sum_probs=110.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.++..++.|++.||+|||+.+++|+||+|+||+++.+   +.+++.+|+..                        
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~p  172 (260)
T cd06606          96 GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSD---GVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAP  172 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC---CCEEEcccccEEecccccccccccCCCCCccccCH
Confidence            368899999999999999999999999999999999999876   45566666511                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         .+...+.++|+||+|+++|++++|..|+....     +..............+..+...+..+.+++.+|+..+|++
T Consensus       173 E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~  247 (260)
T cd06606         173 EVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKK  247 (260)
T ss_pred             hhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhh
Confidence               11224678999999999999999996665442     2333333343334556677788999999999999999999


Q ss_pred             CcCHHHHhcCCCC
Q 039869          136 RWTAKHVLAHPFP  148 (152)
Q Consensus       136 R~~~~~~l~h~~~  148 (152)
                      ||++.+++.||||
T Consensus       248 Rp~~~~ll~~~~~  260 (260)
T cd06606         248 RPTADELLQHPFL  260 (260)
T ss_pred             CCCHHHHhhCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=1.9e-27  Score=165.73  Aligned_cols=137  Identities=30%  Similarity=0.426  Sum_probs=103.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.+||+.+++|+||+|+||+++.+   +.+++.||+..                        
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~P  179 (272)
T cd06629         103 GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDAD---GICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAP  179 (272)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCC---CeEEEeeccccccccccccccccccccCCccccCH
Confidence            468899999999999999999999999999999999999876   44555554411                        


Q ss_pred             ---hcC--CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC----CCCCCChhHHHHHHHhh
Q 039869           59 ---HGL--LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE----FPSNISEDGRDFLSKCF  129 (152)
Q Consensus        59 ---~~~--~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~l  129 (152)
                         .+.  .++.++|+||+|+++|++++|..|+...      ...............+.    ....++.++.+++..|+
T Consensus       180 E~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  253 (272)
T cd06629         180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE------EAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACF  253 (272)
T ss_pred             HHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc------chHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHh
Confidence               111  2466799999999999999999666432      22222222111111222    22356889999999999


Q ss_pred             ccccCCCcCHHHHhcCCCC
Q 039869          130 IRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       130 ~~~p~~R~~~~~~l~h~~~  148 (152)
                      ..+|++||++.++++|||+
T Consensus       254 ~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         254 TINPDNRPTARELLQHPFI  272 (272)
T ss_pred             cCChhhCCCHHHHhhCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.95  E-value=1.4e-27  Score=168.23  Aligned_cols=138  Identities=24%  Similarity=0.375  Sum_probs=102.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++..++.++.|++.||+|||+++++|+||+|+||+++.+   +.++++||+.                         
T Consensus       101 ~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~  177 (293)
T cd07843         101 QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNR---GILKICDFGLAREYGSPLKPYTQLVVTLWYRAPEL  177 (293)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCC---CcEEEeecCceeeccCCccccccccccccccCchh
Confidence            358999999999999999999999999999999999999877   5566666641                         


Q ss_pred             hhc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc----------------------------C
Q 039869           58 RHG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS----------------------------S  108 (152)
Q Consensus        58 ~~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~  108 (152)
                      ..+ ...+.++|+||+|+++|++++|..|+....     ............                            .
T Consensus       178 ~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (293)
T cd07843         178 LLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS-----EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQ  252 (293)
T ss_pred             hcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchh
Confidence            111 123567999999999999999996665432     111111100000                            0


Q ss_pred             CCCCCCCC-CChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          109 EVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       109 ~~~~~~~~-~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ....++.. +++.+.+++.+||+.+|++||++.+++.||||
T Consensus       253 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         253 LRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            00112222 57889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.95  E-value=2.2e-27  Score=163.62  Aligned_cols=137  Identities=25%  Similarity=0.345  Sum_probs=110.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +.++++.++..++.|++.||.+||+.|++|+||+|+||+++.+   +.++++||+.                        
T Consensus        97 ~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe  173 (258)
T cd08215          97 GKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSN---GLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPE  173 (258)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCC---CcEEECCccceeecccCcceecceeeeecccChh
Confidence            3678999999999999999999999999999999999999876   4556666542                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..++.++|+||+|++++++++|..|+...      ....+...... ...+.++..++..+.+++..||+.+|++|
T Consensus       174 ~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  246 (258)
T cd08215         174 LCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE------NLLELALKILK-GQYPPIPSQYSSELRNLVSSLLQKDPEER  246 (258)
T ss_pred             HhccCCCCccccHHHHHHHHHHHHcCCCCCCCC------cHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence             12233467899999999999999999665433      33444444332 33456677889999999999999999999


Q ss_pred             cCHHHHhcCCCC
Q 039869          137 WTAKHVLAHPFP  148 (152)
Q Consensus       137 ~~~~~~l~h~~~  148 (152)
                      |++.++++||||
T Consensus       247 p~~~~ll~~~~~  258 (258)
T cd08215         247 PSIAQILQSPFI  258 (258)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.95  E-value=1.4e-27  Score=165.88  Aligned_cols=137  Identities=30%  Similarity=0.427  Sum_probs=106.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..+..++.|++.||++||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  177 (265)
T cd06652         101 GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSV---GNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMS  177 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCC---CCEEECcCccccccccccccccccccCCCCccccC
Confidence            457889999999999999999999999999999999999876   45566666522                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          .+...+.++|+||||+++|++++|+.|+...      ...............+..|...+..+.+++.+|+. +|+
T Consensus       178 PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~  250 (265)
T cd06652         178 PEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF------EAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAK  250 (265)
T ss_pred             hhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc------chHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-Chh
Confidence                1222356799999999999999999776543      22222223333333455667788889999999995 999


Q ss_pred             CCcCHHHHhcCCCCC
Q 039869          135 LRWTAKHVLAHPFPS  149 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~  149 (152)
                      +||+++++++|||+.
T Consensus       251 ~Rp~~~~il~~~~~~  265 (265)
T cd06652         251 LRPSADELLRHTFVH  265 (265)
T ss_pred             hCCCHHHHhcCcccC
Confidence            999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.2e-27  Score=167.17  Aligned_cols=139  Identities=23%  Similarity=0.327  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.+||+.|++|+||+|+||+++.+   +.++++||+..                        
T Consensus        96 ~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  172 (277)
T cd06917          96 GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNT---GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEV  172 (277)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCC---CCEEEccCCceeecCCCccccccccCCcceeCHHH
Confidence            468899999999999999999999999999999999999876   45566666511                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCC-CCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS-NISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++|..|+...      ........... ...+.++. .++.++.+++.+||..+|++
T Consensus       173 ~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  245 (277)
T cd06917         173 ITEGKYYDTKADIWSLGITIYEMATGNPPYSDV------DAFRAMMLIPK-SKPPRLEDNGYSKLLREFVAACLDEEPKE  245 (277)
T ss_pred             hccCCccccchhHHHHHHHHHHHHhCCCCCCCC------Chhhhhhcccc-CCCCCCCcccCCHHHHHHHHHHcCCCccc
Confidence              1223467899999999999999999766443      22221111111 12233333 37889999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      ||++.+++.|+||++.
T Consensus       246 R~~~~~il~~~~~~~~  261 (277)
T cd06917         246 RLSAEELLKSKWIKAH  261 (277)
T ss_pred             CcCHHHHhhChHhhcc
Confidence            9999999999999763

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.95  E-value=1.4e-27  Score=168.56  Aligned_cols=140  Identities=26%  Similarity=0.416  Sum_probs=106.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      +++++..+..++.|++.|++|||+ .+++||||+|+||+++.+   ..++++||+...                      
T Consensus       109 ~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~  185 (296)
T cd06618         109 GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS---GNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPER  185 (296)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC---CCEEECccccchhccCCCcccCCCCCccccCHhh
Confidence            468899999999999999999997 599999999999999876   556677765221                      


Q ss_pred             --c----CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC--CCCChhHHHHHHHhhcc
Q 039869           60 --G----LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIR  131 (152)
Q Consensus        60 --~----~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~  131 (152)
                        +    ..++.++|+||+|+++|++++|+.|+....     ...+........ ..+..+  ..++.++.+++.+||..
T Consensus       186 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~  259 (296)
T cd06618         186 IDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK-----TEFEVLTKILQE-EPPSLPPNEGFSPDFCSFVDLCLTK  259 (296)
T ss_pred             cCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch-----hHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHHccC
Confidence              0    113567999999999999999997764421     112222222211 122222  34788999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~~  151 (152)
                      +|++||++.++++||||+..
T Consensus       260 ~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         260 DHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             ChhhCCCHHHHhcChhhhcc
Confidence            99999999999999999763

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=1.9e-28  Score=169.47  Aligned_cols=140  Identities=29%  Similarity=0.393  Sum_probs=104.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.|++.||.+||+++++|+||||+||+++.+   ..++++||+..                        
T Consensus        93 ~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  169 (260)
T PF00069_consen   93 KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDEN---GEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEV  169 (260)
T ss_dssp             SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTT---SEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            568899999999999999999999999999999999999876   44466666522                        


Q ss_pred             -h-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC--CCCCCChhHHHHHHHhhccccC
Q 039869           59 -H-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE--FPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 -~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                       . +...+.++|+||+|+++|++++|..|+.....   .+................  .....+..+.+++.+||..||+
T Consensus       170 ~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  246 (260)
T PF00069_consen  170 LQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS---DDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPE  246 (260)
T ss_dssp             HTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH---HHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGG
T ss_pred             ccccccccccccccccccccccccccccccccccc---hhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChh
Confidence             2 34457889999999999999999967665410   011111111111111111  1112248899999999999999


Q ss_pred             CCcCHHHHhcCCCC
Q 039869          135 LRWTAKHVLAHPFP  148 (152)
Q Consensus       135 ~R~~~~~~l~h~~~  148 (152)
                      +||++.++++||||
T Consensus       247 ~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  247 QRPSAEELLKHPWF  260 (260)
T ss_dssp             GSTTHHHHHTSGGG
T ss_pred             HCcCHHHHhcCCCC
Confidence            99999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.95  E-value=1.8e-27  Score=167.88  Aligned_cols=139  Identities=25%  Similarity=0.378  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.|++.||+|||+.|++|+||+|+||+++.+   +.++++||+..                        
T Consensus       111 ~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~  187 (292)
T cd06657         111 TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEL  187 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC---CCEEEcccccceecccccccccccccCccccCHHH
Confidence            457899999999999999999999999999999999999877   44566666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc-CCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS-SEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+|+++|++++|..|+.+.      ............ .........++..+.+++.+||..+|.+|
T Consensus       188 ~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R  261 (292)
T cd06657         188 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQR  261 (292)
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccC
Confidence             1222356799999999999999999776543      323332222211 11112234578889999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.+++.||||..
T Consensus       262 ~~~~~ll~~~~~~~  275 (292)
T cd06657         262 ATAAELLKHPFLAK  275 (292)
T ss_pred             cCHHHHhcChHHhc
Confidence            99999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=8.7e-28  Score=172.82  Aligned_cols=140  Identities=26%  Similarity=0.358  Sum_probs=104.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------h-
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------H-   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~-   59 (152)
                      ..+++..+..++.|++.||+|||+.+++||||||+||+++.+   +.++++|||..                      . 
T Consensus       112 ~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         112 HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED---CELKILDFGLARHADAEMTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEEeeCCCCcCCCCCCCCceeeecccChhhhcC
Confidence            368899999999999999999999999999999999999876   45666666511                      1 


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--------------------CCCC-------
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--------------------EVPE-------  112 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-------  112 (152)
                      +..++.++|+||+|+++|++++|+.||.+..     ....+........                    ..+.       
T Consensus       189 ~~~~~~~~Dv~slGvil~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (342)
T cd07879         189 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFS  263 (342)
T ss_pred             ccccCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHH
Confidence            1234668999999999999999997776542     1111111110000                    0000       


Q ss_pred             -CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 -FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 -~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       .....+.++.+++.+||..||++||++.+++.||||+.
T Consensus       264 ~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~  302 (342)
T cd07879         264 TLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS  302 (342)
T ss_pred             HHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence             11246778899999999999999999999999999975

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.95  E-value=1.1e-27  Score=167.53  Aligned_cols=138  Identities=27%  Similarity=0.389  Sum_probs=107.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++..++.++.|++.|+.|||+++++|+||+|+||+++.+   +.++++||+.                         
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  172 (277)
T cd06642          96 GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV  172 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC---CCEEEccccccccccCcchhhhcccCcccccCHHH
Confidence            457899999999999999999999999999999999999876   4556666541                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+|+++|++++|+.|+...      ........... ...+..+..++.++.+++.+|+..+|++||
T Consensus       173 ~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (277)
T cd06642         173 IKQSAYDFKADIWSLGITAIELAKGEPPNSDL------HPMRVLFLIPK-NSPPTLEGQYSKPFKEFVEACLNKDPRFRP  245 (277)
T ss_pred             hCcCCCchhhhHHHHHHHHHHHHhCCCCCccc------chhhHHhhhhc-CCCCCCCcccCHHHHHHHHHHccCCcccCc
Confidence            11223466899999999999999999665433      22222222221 223445566788999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.+++.||||+.
T Consensus       246 ~~~~il~~~~~~~  258 (277)
T cd06642         246 TAKELLKHKFITR  258 (277)
T ss_pred             CHHHHHHhHHHHH
Confidence            9999999999863

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.95  E-value=1.7e-27  Score=173.29  Aligned_cols=133  Identities=17%  Similarity=0.283  Sum_probs=103.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.+++.++.||+.||+|||++|++||||||+||+++.+   ..++++|||..                        
T Consensus       207 ~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~---~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  283 (374)
T cd05106         207 WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG---RVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  283 (374)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC---CeEEEeeceeeeeccCCcceeeccCCCCccceeCH
Confidence            468899999999999999999999999999999999999876   55677777632                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+||++|++++ |+.||....     .......... ....+..+...+.++.+++.+||+.||+
T Consensus       284 E~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~  357 (374)
T cd05106         284 ESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGIL-----VNSKFYKMVK-RGYQMSRPDFAPPEIYSIMKMCWNLEPT  357 (374)
T ss_pred             HHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccc-----ccHHHHHHHH-cccCccCCCCCCHHHHHHHHHHcCCChh
Confidence               11234678999999999999997 886665542     2222222222 2333445566789999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       358 ~RPs~~~l~~  367 (374)
T cd05106         358 ERPTFSQISQ  367 (374)
T ss_pred             hCcCHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.95  E-value=1.2e-27  Score=165.63  Aligned_cols=138  Identities=25%  Similarity=0.314  Sum_probs=109.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      .++++..+..++.|++.||.|||.++++|+||+|+||+++.+   +.+++.|++.                        .
T Consensus        95 ~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~  171 (258)
T cd05578          95 VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ---GHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVL  171 (258)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC---CCEEEeecccccccCCCccccccCCChhhcCHHHH
Confidence            368899999999999999999999999999999999999877   4455555541                        1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++|+||+|+++|++++|..|+......   ....+.....  ...+..+..++..+.+++.+||..+|.+||+
T Consensus       172 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  246 (258)
T cd05578         172 CRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQE--TADVLYPATWSTEAIDAINKLLERDPQKRLG  246 (258)
T ss_pred             cccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhc--cccccCcccCcHHHHHHHHHHccCChhHcCC
Confidence            2233467899999999999999999776554210   1223322222  1445667788999999999999999999999


Q ss_pred             H--HHHhcCCCC
Q 039869          139 A--KHVLAHPFP  148 (152)
Q Consensus       139 ~--~~~l~h~~~  148 (152)
                      +  .++++||||
T Consensus       247 ~~~~~l~~~~~~  258 (258)
T cd05578         247 DNLKDLKNHPYF  258 (258)
T ss_pred             ccHHHHhcCCCC
Confidence            9  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.95  E-value=8.4e-28  Score=172.28  Aligned_cols=139  Identities=23%  Similarity=0.303  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.|++.||+|||+.+++||||||+||+++.+   +.++++|||...                       
T Consensus        97 ~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~---~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE  173 (332)
T cd05623          97 DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE  173 (332)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC---CCEEEeecchheecccCCcceecccccCccccCHH
Confidence            568899999999999999999999999999999999999876   456667766211                       


Q ss_pred             --------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC---CCCCCCCChhHHHHHHHh
Q 039869           60 --------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV---PEFPSNISEDGRDFLSKC  128 (152)
Q Consensus        60 --------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~  128 (152)
                              ...++.++|+||+||++|++++|+.||...      +..+....+......   +.....++.++.+++.+|
T Consensus       174 ~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~------~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~l  247 (332)
T cd05623         174 ILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE------SLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRL  247 (332)
T ss_pred             HHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC------CHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHH
Confidence                    112456799999999999999999887654      444444444332222   223346789999999999


Q ss_pred             hccccCC--CcCHHHHhcCCCCCC
Q 039869          129 FIRVHQL--RWTAKHVLAHPFPSV  150 (152)
Q Consensus       129 l~~~p~~--R~~~~~~l~h~~~~~  150 (152)
                      +..+++.  |+++.++++||||++
T Consensus       248 l~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         248 ICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             ccChhhhcCCCCHHHHhCCCCcCC
Confidence            8765544  689999999999985

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.95  E-value=1.6e-27  Score=165.19  Aligned_cols=142  Identities=28%  Similarity=0.462  Sum_probs=110.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      .++++..++.++.|++.|+++||+ .+++|+||+|+||+++.+   +.++++||+.                        
T Consensus        94 ~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE  170 (264)
T cd06623          94 GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSK---GEVKIADFGISKVLENTLDQCNTFVGTVTYMSPE  170 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCC---CCEEEccCccceecccCCCcccceeecccccCHh
Confidence            568999999999999999999999 999999999999999877   4555666541                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCC-CChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||||+++|++++|..|+.....   .........+. ....+..+.. ++..+.+++..||..+|++
T Consensus       171 ~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  246 (264)
T cd06623         171 RIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ---PSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKDPKK  246 (264)
T ss_pred             hhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc---cCHHHHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccCChhh
Confidence             1122335679999999999999999976655421   12223333333 2334455566 8899999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      ||++.++++|||++.-
T Consensus       247 R~~~~~ll~~~~~~~~  262 (264)
T cd06623         247 RPSAAELLQHPFIKKA  262 (264)
T ss_pred             CCCHHHHHhCHHHHhc
Confidence            9999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=2.1e-27  Score=170.21  Aligned_cols=140  Identities=25%  Similarity=0.312  Sum_probs=105.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..+..++.|++.||++||+.|++|+||+|+||+++.+   +.++++||+...                       
T Consensus       114 ~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (335)
T PTZ00024        114 IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSK---GICKIADFGLARRYGYPPYSDTLSKDETMQRREEM  190 (335)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCC---CCEEECCccceeecccccccccccccccccccccc
Confidence            458899999999999999999999999999999999999877   455666665221                       


Q ss_pred             ----------------c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcC-CCC---------
Q 039869           60 ----------------G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSS-EVP---------  111 (152)
Q Consensus        60 ----------------~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~---------  111 (152)
                                      + ..++.++|+||+||++|++++|..|+.+..      ..+....+ .... ...         
T Consensus       191 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~  264 (335)
T PTZ00024        191 TSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN------EIDQLGRIFELLGTPNEDNWPQAKKL  264 (335)
T ss_pred             cccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCchhhCcchhhc
Confidence                            1 123567999999999999999996665442      22211111 1000 000         


Q ss_pred             ---------------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          112 ---------------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       112 ---------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                     ......+.++.+++.+||..+|++||++.+++.||||+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        265 PLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             ccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence                           0123457889999999999999999999999999999875

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.95  E-value=3.4e-27  Score=166.65  Aligned_cols=131  Identities=16%  Similarity=0.295  Sum_probs=103.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      .+++..+..++.|++.||+|||++|++|+||||+||+++.+   ..+++.|||..                        .
T Consensus       115 ~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  191 (297)
T cd05089         115 TLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN---LASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLN  191 (297)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC---CeEEECCcCCCccccceeccCCCCcCccccCchhhc
Confidence            57889999999999999999999999999999999999876   45566666521                        1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           60 GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      +..++.++|+|||||++|++++ |..||.+.      ........... ...+..+..++.++.+++.+|+..+|.+||+
T Consensus       192 ~~~~~~~~DvwSlG~il~el~t~g~~pf~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  264 (297)
T cd05089         192 YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM------TCAELYEKLPQ-GYRMEKPRNCDDEVYELMRQCWRDRPYERPP  264 (297)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            2234678999999999999997 87666554      44444444432 2334456678999999999999999999999


Q ss_pred             HHHHhc
Q 039869          139 AKHVLA  144 (152)
Q Consensus       139 ~~~~l~  144 (152)
                      +.++++
T Consensus       265 ~~~i~~  270 (297)
T cd05089         265 FAQISV  270 (297)
T ss_pred             HHHHHH
Confidence            999864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=1.2e-27  Score=166.36  Aligned_cols=137  Identities=25%  Similarity=0.319  Sum_probs=102.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.++..++.|++.||+|||+.+++|+|++|+||+++.+   +.++++||+..                       
T Consensus       100 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE  176 (267)
T cd06646         100 TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDN---GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPE  176 (267)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC---CCEEECcCccceeecccccccCccccCccccCHh
Confidence            3568899999999999999999999999999999999999876   44556665511                       


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC---CCCCCCChhHHHHHHHhhc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~l~  130 (152)
                           .+..++.++|+||+||++|++++|+.|+....      ..............+   ..+..++..+.+++.+||.
T Consensus       177 ~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  250 (267)
T cd06646         177 VAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH------PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLT  250 (267)
T ss_pred             HcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc------hhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhh
Confidence                 11223457999999999999999997765432      111111111111111   1224578899999999999


Q ss_pred             cccCCCcCHHHHhcCCC
Q 039869          131 RVHQLRWTAKHVLAHPF  147 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~  147 (152)
                      .+|++||+++++++|+|
T Consensus       251 ~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         251 KNPKKRPTAERLLTHLF  267 (267)
T ss_pred             CChhhCcCHHHHhcCCC
Confidence            99999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-27  Score=174.01  Aligned_cols=140  Identities=18%  Similarity=0.331  Sum_probs=118.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCC--------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL--------------------   62 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~--------------------   62 (152)
                      +.++|..+++|++||+.|+.|+|...+|||||||+|+++-+.  .+.++++|||+...+.                    
T Consensus       113 ~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK--lGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEIL  190 (864)
T KOG4717|consen  113 EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK--LGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEIL  190 (864)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee--cCceEeeeccccccCCCcchhhcccchhhccCchhh
Confidence            468899999999999999999999999999999999998643  3788999998443322                    


Q ss_pred             ----C-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           63 ----L-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        63 ----~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                          | -.++||||||||||-+++|+.||...      +..+...++....+  ..|...+.+.+++|..||..||++|-
T Consensus       191 LGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA------NDSETLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRA  262 (864)
T KOG4717|consen  191 LGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA------NDSETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRA  262 (864)
T ss_pred             hcCccCCcchhhhHHHHHHHHHHhCCCccccc------cchhhhhhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhc
Confidence                2 24699999999999999999777655      55566666665555  45788999999999999999999999


Q ss_pred             CHHHHhcCCCCCCCC
Q 039869          138 TAKHVLAHPFPSVDE  152 (152)
Q Consensus       138 ~~~~~l~h~~~~~~~  152 (152)
                      +.+++..|+|++..+
T Consensus       263 slEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  263 SLEEIVSTSWLQAGD  277 (864)
T ss_pred             cHHHHhccccccCCC
Confidence            999999999999754

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.95  E-value=2.1e-27  Score=168.12  Aligned_cols=136  Identities=26%  Similarity=0.323  Sum_probs=99.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.+++++|+..                         
T Consensus       115 ~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~a  191 (310)
T cd07865         115 KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD---GILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRP  191 (310)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC---CcEEECcCCCcccccCCcccCCCCccCcccCccccC
Confidence            68999999999999999999999999999999999999877   45566665511                         


Q ss_pred             ----hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCCCC---------------CC---
Q 039869           59 ----HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSEVP---------------EF---  113 (152)
Q Consensus        59 ----~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------------~~---  113 (152)
                          .+ ..++.++|+||+|+++|++++|..|+.+..      .......+..  +...+               ..   
T Consensus       192 PE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (310)
T cd07865         192 PELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT------EQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQG  265 (310)
T ss_pred             cHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCc
Confidence                11 113567999999999999999996664432      1111111100  00000               00   


Q ss_pred             ----------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          114 ----------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       114 ----------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                                +...+..+.+++.+||..||++||++.++++||||
T Consensus       266 ~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         266 QKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                      11235677899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=3.1e-27  Score=164.57  Aligned_cols=131  Identities=16%  Similarity=0.305  Sum_probs=102.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.|++.||+|||+++++||||||+||+++.+   ..++++|||...                        
T Consensus       108 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe  184 (272)
T cd05075         108 YLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN---MNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIE  184 (272)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC---CCEEECCCCcccccCcccceecCCcccCCcccCCHH
Confidence            47899999999999999999999999999999999999876   556677776321                        


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         +..++.++|+||+|+++|++++ |..|+.+.      ........+..+. ....+..++..+.+++.+||..+|++
T Consensus       185 ~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~  257 (272)
T cd05075         185 SLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV------ENSEIYDYLRQGN-RLKQPPDCLDGLYSLMSSCWLLNPKD  257 (272)
T ss_pred             HccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCccc
Confidence               1223567999999999999999 66555432      3444444444333 33445678899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       258 Rps~~~l~~  266 (272)
T cd05075         258 RPSFETLRC  266 (272)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.95  E-value=5.5e-27  Score=164.02  Aligned_cols=135  Identities=16%  Similarity=0.294  Sum_probs=106.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..+..++.||+.||+|||+++++|+||||+||+++.++....++++||+..                         
T Consensus       112 ~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05036         112 SLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPE  191 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHH
Confidence            5789999999999999999999999999999999999986644445667666522                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+|||||++|++++ |..||.+.      ........+.. ......+..++..+.+++.+|+..+|++
T Consensus       192 ~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~cl~~~p~~  264 (277)
T cd05036         192 AFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR------TNQEVMEFVTG-GGRLDPPKGCPGPVYRIMTDCWQHTPED  264 (277)
T ss_pred             HHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHcCCCccc
Confidence              22335678999999999999997 77665443      33344443332 2334556778999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.++++|
T Consensus       265 Rps~~~vl~~  274 (277)
T cd05036         265 RPNFATILER  274 (277)
T ss_pred             CcCHHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.95  E-value=7.1e-28  Score=165.21  Aligned_cols=131  Identities=22%  Similarity=0.345  Sum_probs=102.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~   60 (152)
                      .++++..+..++.|++.||+|||+.+++|+||||+||+++.+   +.+++.+|+..                      .+
T Consensus        80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~  156 (237)
T cd05576          80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR---GHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGI  156 (237)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC---CCEEEecccchhccccccccCCcCccccCCcccCC
Confidence            358899999999999999999999999999999999999877   44555555421                      12


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH-
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA-  139 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~-  139 (152)
                      ..++.++|+||+|+++|++++|..++....       ....     .......+..++..+.+++.+||+.||++|+++ 
T Consensus       157 ~~~~~~~DvwslG~il~el~~g~~~~~~~~-------~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         157 SEETEACDWWSLGAILFELLTGKTLVECHP-------SGIN-----THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCcchhhcCc-------hhcc-----cccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            234567999999999999999985543321       1100     111224566788999999999999999999985 


Q ss_pred             ----HHHhcCCCC
Q 039869          140 ----KHVLAHPFP  148 (152)
Q Consensus       140 ----~~~l~h~~~  148 (152)
                          ++++.||||
T Consensus       225 ~~~~~~~~~h~~~  237 (237)
T cd05576         225 VAGVEDIKSHPFF  237 (237)
T ss_pred             ccchHHHHcCCCC
Confidence                899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=1.6e-27  Score=171.18  Aligned_cols=146  Identities=22%  Similarity=0.274  Sum_probs=105.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..+..++.|++.||.|||+++++|+||||+||+++.+   +.++++||+..                       
T Consensus       102 ~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  178 (337)
T cd07858         102 SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN---CDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPE  178 (337)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC---CCEEECcCccccccCCCcccccccccccCccChH
Confidence            4578999999999999999999999999999999999999876   45566666521                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCC---------------C---CChHHHHHHHHhcCCC-----CC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG---------------L---ASRDDLLELIAFSSEV-----PE  112 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~~-----~~  112 (152)
                         .+..++.++|+||+|+++|++++|+.||.+.....               .   ................     ..
T Consensus       179 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (337)
T cd07858         179 LLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFAR  258 (337)
T ss_pred             HHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHH
Confidence               11234678999999999999999997765431000               0   0000000000000000     01


Q ss_pred             CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ....++.++.+++.+||..+|++||++.++++||||+.
T Consensus       259 ~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         259 LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence            12457888999999999999999999999999999964

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=2e-27  Score=169.88  Aligned_cols=139  Identities=27%  Similarity=0.377  Sum_probs=105.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..++.++.|++.||++||+.|++|+||||+||+++.+   +.++++||+...                       
T Consensus        98 ~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~---~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  174 (330)
T cd07834          98 QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN---CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRA  174 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEcccCceEeecccccccccccccccccCcCC
Confidence            478999999999999999999999999999999999999877   566666665111                       


Q ss_pred             -----cC-CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh------------------------cCC
Q 039869           60 -----GL-LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF------------------------SSE  109 (152)
Q Consensus        60 -----~~-~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~  109 (152)
                           +. .++.++|+||+|+++|++++|..||.+..      ..+....+..                        ...
T Consensus       175 PE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (330)
T cd07834         175 PELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD------YIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPK  248 (330)
T ss_pred             ceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHhcCCCChhHhhhccccchhhHHhhccc
Confidence                 11 34567999999999999999997775542      1111111100                        000


Q ss_pred             C-----CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          110 V-----PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       110 ~-----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .     .......+.++.+++..||..+|++||++.+++.||||++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         249 KPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             CCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence            0     0112346888999999999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.95  E-value=2.5e-27  Score=166.34  Aligned_cols=138  Identities=28%  Similarity=0.410  Sum_probs=106.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------R   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------~   58 (152)
                      .+++..+..++.|++.||++||..|++|+||+|+||+++.+   +.+++.+++.                         .
T Consensus       112 ~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  188 (286)
T cd06614         112 RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD---GSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVI  188 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCC---CCEEECccchhhhhccchhhhccccCCcccCCHhHh
Confidence            68899999999999999999999999999999999999876   4455555541                         1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..++.++|+||+|+++|++++|..|+...      +.......... .......+..++.++.+++..||+.+|.+||
T Consensus       189 ~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  262 (286)
T cd06614         189 KRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE------PPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRP  262 (286)
T ss_pred             cCCCCCCccccHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCc
Confidence            2233467899999999999999999666443      32222222221 1111122334789999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++|+||..
T Consensus       263 t~~~il~~~~~~~  275 (286)
T cd06614         263 SAEELLQHPFLKK  275 (286)
T ss_pred             CHHHHhhChHhhc
Confidence            9999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.95  E-value=3.4e-27  Score=162.89  Aligned_cols=137  Identities=23%  Similarity=0.261  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.|+++||++|++|+||+|+||+++.+.  ..+++++|+..                        
T Consensus        96 ~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~  173 (256)
T cd08220          96 SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK--MVVKIGDFGISKILSSKSKAYTVVGTPCYISPELC  173 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEEccCCCceecCCCccccccccCCcccCchhc
Confidence            3578999999999999999999999999999999999997542  23456665511                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+...+.++|+||+|+++|++++|..|+...      +.......... ....+.+..++.++.+++..||..+|++||+
T Consensus       174 ~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  246 (256)
T cd08220         174 EGKPYNQKSDIWALGCVLYELASLKRAFEAA------NLPALVLKIMS-GTFAPISDRYSPDLRQLILSMLNLDPSKRPQ  246 (256)
T ss_pred             cCCCCCcccchHHHHHHHHHHHhCCCCcccC------chHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHHccCChhhCCC
Confidence            1222356799999999999999999776544      22333333322 2234456678999999999999999999999


Q ss_pred             HHHHhcCCCC
Q 039869          139 AKHVLAHPFP  148 (152)
Q Consensus       139 ~~~~l~h~~~  148 (152)
                      +.++++|||+
T Consensus       247 ~~~ll~~p~~  256 (256)
T cd08220         247 LSQIMAQPIC  256 (256)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=4.5e-27  Score=162.79  Aligned_cols=132  Identities=21%  Similarity=0.293  Sum_probs=104.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..+..++.|++.||++||++|++|+||||+||+++.+   ..++++||+..                        
T Consensus        90 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  166 (257)
T cd05116          90 KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALGADENYYKAKTHGKWPVKWYA  166 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC---CeEEECCCccccccCCCCCeeeecCCCCCCccccC
Confidence            468899999999999999999999999999999999999876   45666666521                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||||+++||+++ |..||...      ....+...+..+. .++.+..++.++.+++.+|++.+|
T Consensus       167 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~~~~~p  239 (257)
T cd05116         167 PECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM------KGNEVTQMIESGE-RMECPQRCPPEMYDLMKLCWTYGV  239 (257)
T ss_pred             HhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHhccCc
Confidence                11223457999999999999998 77555443      4455555555433 455677899999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++.+
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05116         240 DERPGFAVVEL  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.95  E-value=2.3e-27  Score=166.19  Aligned_cols=137  Identities=28%  Similarity=0.436  Sum_probs=102.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..++.++.|++.||+|||+.+++|+||+|+||+++.+   ..+++.||+..                         
T Consensus        95 ~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~  171 (283)
T cd07835          95 GLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDRE---GALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL  171 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC---CcEEEeecccccccCCCccccCccccccCCCCCcee
Confidence            58999999999999999999999999999999999999876   44555555421                         


Q ss_pred             hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh----------------------cC----CCC
Q 039869           59 HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF----------------------SS----EVP  111 (152)
Q Consensus        59 ~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~----~~~  111 (152)
                      .+ ..++.++|+||+|+++|++++|+.||....     ...........                      ..    ...
T Consensus       172 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (283)
T cd07835         172 LGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS-----EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLS  246 (283)
T ss_pred             ecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchh
Confidence            11 123567999999999999999997765432     11111111100                      00    001


Q ss_pred             CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 ~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      .....++.++.+++.+||+.+|++||++.++++||||
T Consensus       247 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         247 KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            1234577889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=3.6e-27  Score=165.84  Aligned_cols=138  Identities=23%  Similarity=0.361  Sum_probs=101.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..++.++.|++.||.|||+++++|+||||+||+++.+   +.++++||+...                       
T Consensus        98 ~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~  174 (291)
T cd07844          98 GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISER---GELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDV  174 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCC---CCEEECccccccccCCCCccccccccccccCCcHH
Confidence            467899999999999999999999999999999999999877   456667665211                       


Q ss_pred             --c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHH-HHHhcC------------------C------CC
Q 039869           60 --G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE-LIAFSS------------------E------VP  111 (152)
Q Consensus        60 --~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~------~~  111 (152)
                        + ..++.++|+||+|+++|++++|..|+.+...     ..+... ......                  .      ..
T Consensus       175 ~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (291)
T cd07844         175 LLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD-----VEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPR  249 (291)
T ss_pred             hhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc-----HHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCCh
Confidence              1 2245678999999999999999977654421     111111 000000                  0      00


Q ss_pred             ---CCCCCCC--hhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 ---EFPSNIS--EDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 ---~~~~~~~--~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                         .....++  .++.+++.+||..+|++||++.+++.||||
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         250 PLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             hHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence               0001233  778899999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=3.2e-27  Score=169.23  Aligned_cols=146  Identities=21%  Similarity=0.275  Sum_probs=103.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++..++.++.|++.||+|||+.|++|+||||+||+++.+   +.++++||+...                      
T Consensus        99 ~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y  175 (332)
T cd07857          99 GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD---CELKICDFGLARGFSENPGENAGFMTEYVATRWY  175 (332)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC---CCEEeCcCCCceecccccccccccccCcccCccc
Confidence            4678999999999999999999999999999999999999877   455666665211                      


Q ss_pred             --------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---------CChHHHHHHH---------Hh-cC-CCC
Q 039869           60 --------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---------ASRDDLLELI---------AF-SS-EVP  111 (152)
Q Consensus        60 --------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~---------~~-~~-~~~  111 (152)
                              +..++.++|+||+|+++|++++|..|+........         ....+.....         .. .. ...
T Consensus       176 ~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (332)
T cd07857         176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKK  255 (332)
T ss_pred             cCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCc
Confidence                    12235679999999999999999966644310000         0000000000         00 00 000


Q ss_pred             ---CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 ---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                         ......+..+.+++.+||..+|++||++.+++.|||+++
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~  297 (332)
T cd07857         256 PFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI  297 (332)
T ss_pred             chHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence               112335788999999999999999999999999999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.95  E-value=5.9e-27  Score=166.90  Aligned_cols=141  Identities=27%  Similarity=0.357  Sum_probs=110.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++.++..++.|++.||.|||.++++|+||+|+||+++.+   +.++++||+..                       
T Consensus       119 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~  195 (317)
T cd06635         119 KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP---GQVKLADFGSASIASPANSFVGTPYWMAPEVILA  195 (317)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC---CCEEEecCCCccccCCcccccCCccccChhhhhc
Confidence            3568899999999999999999999999999999999999876   45666666511                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+...+.++|+||+||++|++++|..|+...      +.......+............++..+.+++.+||+.+|++||
T Consensus       196 ~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  269 (317)
T cd06635         196 MDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRP  269 (317)
T ss_pred             CCCCCCCccccHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCc
Confidence             1223466799999999999999999777654      333333333333333333456788899999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.+++.|+|+...
T Consensus       270 t~~~il~~~~~~~~  283 (317)
T cd06635         270 TSEELLKHMFVLRE  283 (317)
T ss_pred             CHHHHHhChhhhcc
Confidence            99999999998653

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=4.5e-27  Score=163.40  Aligned_cols=135  Identities=21%  Similarity=0.283  Sum_probs=104.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++..+..++.|++.||+|||+++++|+||+|+||+++.+   +.+++.||+.                         
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~  177 (267)
T cd08228         101 RLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER  177 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCC---CCEEECccccceeccchhHHHhcCCCCccccChhh
Confidence            347889999999999999999999999999999999999876   4455555541                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+...+.++|+||+|+++|++++|+.|+.....    +.......+.....++..+..++..+.+++.+||..+|++||
T Consensus       178 ~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  253 (267)
T cd08228         178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRP  253 (267)
T ss_pred             hccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCc
Confidence            1223346679999999999999999977755421    334444444443333333456788999999999999999999


Q ss_pred             CHHHHhc
Q 039869          138 TAKHVLA  144 (152)
Q Consensus       138 ~~~~~l~  144 (152)
                      ++.++++
T Consensus       254 ~~~~vl~  260 (267)
T cd08228         254 DIGYVHQ  260 (267)
T ss_pred             CHHHHHH
Confidence            9999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-28  Score=175.47  Aligned_cols=139  Identities=27%  Similarity=0.371  Sum_probs=114.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------H-----------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------Q-----------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------~-----------   57 (152)
                      ++.+++..+..+.++++.||.|||..+.+|||||.+||++...   +.+++.|||             .           
T Consensus       105 ~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~---g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPE  181 (467)
T KOG0201|consen  105 GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES---GDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPE  181 (467)
T ss_pred             CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc---CcEEEEecceeeeeechhhccccccccccccchh
Confidence            3455889999999999999999999999999999999999888   677777776             1           


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..|+.++||||||+..+||++|.+|+...      .+.++...+.. ..+|.+...+++.+.+|+..||+.+|+.|
T Consensus       182 VI~~~~Y~~KADIWSLGITaiEla~GePP~s~~------hPmrvlflIpk-~~PP~L~~~~S~~~kEFV~~CL~k~P~~R  254 (467)
T KOG0201|consen  182 VIKQSGYDTKADIWSLGITAIELAKGEPPHSKL------HPMRVLFLIPK-SAPPRLDGDFSPPFKEFVEACLDKNPEFR  254 (467)
T ss_pred             hhccccccchhhhhhhhHHHHHHhcCCCCCccc------CcceEEEeccC-CCCCccccccCHHHHHHHHHHhhcCcccC
Confidence             22445689999999999999999999555443      33444444432 34566777899999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.++|+|+|++.
T Consensus       255 psA~~LLKh~FIk~  268 (467)
T KOG0201|consen  255 PSAKELLKHKFIKR  268 (467)
T ss_pred             cCHHHHhhhHHHHh
Confidence            99999999999863

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=2.8e-27  Score=165.47  Aligned_cols=138  Identities=30%  Similarity=0.451  Sum_probs=102.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.+++.++.|++.||.+||+.+++|+||+|+||+++.+   +.++++||+.                         
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~  169 (283)
T cd05118          93 RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE---GVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPEL  169 (283)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCC---CcEEEeeeeeeEecCCCcccccCccCcccccCcHH
Confidence            478899999999999999999999999999999999999876   4556666541                         


Q ss_pred             hhcC-CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC---------------------------
Q 039869           58 RHGL-LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE---------------------------  109 (152)
Q Consensus        58 ~~~~-~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  109 (152)
                      ..+. .++.++|+||+|+++|++++|+.||....     ....+.........                           
T Consensus       170 ~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd05118         170 LLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS-----EIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMP  244 (283)
T ss_pred             HhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccC
Confidence            1112 34678999999999999999996664432     11111111100000                           


Q ss_pred             CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          110 VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       110 ~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      .......++.++.+++.+||..||++||++.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         245 LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            001123467889999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.95  E-value=8e-27  Score=161.65  Aligned_cols=136  Identities=21%  Similarity=0.314  Sum_probs=107.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +..+++.+++.++.|++.||.+||+.|++|+||+|+||+++.+    .++++||+.                        
T Consensus       100 ~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~----~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe  175 (260)
T cd08222         100 GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN----LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPE  175 (260)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC----CEeecccCceeecCCCcccccCCCCCcCccCHH
Confidence            3568999999999999999999999999999999999999743    356666651                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..++.++|+||+|+++|++++|..|+...      .......... ....+..+..++.++.+++.+|+..+|++|
T Consensus       176 ~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  248 (260)
T cd08222         176 ALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ------NFLSVVLRIV-EGPTPSLPETYSRQLNSIMQSMLNKDPSLR  248 (260)
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHH-cCCCCCCcchhcHHHHHHHHHHhcCChhhC
Confidence             11233456799999999999999999766433      2233333332 233445667788999999999999999999


Q ss_pred             cCHHHHhcCCCC
Q 039869          137 WTAKHVLAHPFP  148 (152)
Q Consensus       137 ~~~~~~l~h~~~  148 (152)
                      |++.++++||||
T Consensus       249 p~~~~il~~~~~  260 (260)
T cd08222         249 PSAAEILRNPFI  260 (260)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.95  E-value=8.3e-27  Score=161.96  Aligned_cols=131  Identities=15%  Similarity=0.182  Sum_probs=104.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      .+++..++.++.|++.||++||+++++|+||||+||+++.+   +.++++||+.                          
T Consensus       100 ~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~---~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~  176 (263)
T cd05052         100 EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES  176 (263)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC---CcEEeCCCccccccccceeeccCCCCCccccCCHHH
Confidence            57889999999999999999999999999999999999876   4566666652                          


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+..++.++|+|||||++|++++ |..|+.+.      ...+....... ...+..+..++.++.+++.+||..+|++|
T Consensus       177 ~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~R  249 (263)
T cd05052         177 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK-GYRMERPEGCPPKVYELMRACWQWNPSDR  249 (263)
T ss_pred             hccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHccCCcccC
Confidence            122334567999999999999998 77665543      44444444433 23455677889999999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       250 p~~~~l~~  257 (263)
T cd05052         250 PSFAEIHQ  257 (263)
T ss_pred             CCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=4.3e-27  Score=166.63  Aligned_cols=137  Identities=28%  Similarity=0.386  Sum_probs=100.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.+++.++.|++.||+|||+.|++|+||||+||+++.+   +.++++||+..                        
T Consensus       110 ~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (311)
T cd07866         110 VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ---GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNL  186 (311)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---CCEEECcCccchhccCCCcccccCCcccccccccc
Confidence            468999999999999999999999999999999999999877   44555555411                        


Q ss_pred             ------------h-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHhcCC---------------
Q 039869           59 ------------H-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAFSSE---------------  109 (152)
Q Consensus        59 ------------~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------  109 (152)
                                  . +..++.++|+||+|+++|++++|+.|+.+..      ....... ......               
T Consensus       187 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (311)
T cd07866         187 VVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS------DIDQLHLIFKLCGTPTEETWPGWRSLPGC  260 (311)
T ss_pred             eeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhchhhhhcccc
Confidence                        1 1224567999999999999999996665432      1111111 100000               


Q ss_pred             -----CCCC-------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          110 -----VPEF-------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       110 -----~~~~-------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                           ....       .....+.+.+++.+||..+|++||++.+++.||||
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         261 EGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             cccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                 0000       12345678899999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.5e-27  Score=169.78  Aligned_cols=140  Identities=25%  Similarity=0.326  Sum_probs=104.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh--------------c--------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH--------------G--------   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~--------------~--------   60 (152)
                      ..+++..++.++.||+.||+|||+++++||||||+||+++.+   +.++++|||...              |        
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE  173 (331)
T cd05597          97 DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKN---GHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPE  173 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCC---CCEEEEECCceeecCCCCCccccceeccccccCHH
Confidence            468899999999999999999999999999999999999876   456666665210              0        


Q ss_pred             ---------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC---CCCCCCCChhHHHHHHHh
Q 039869           61 ---------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV---PEFPSNISEDGRDFLSKC  128 (152)
Q Consensus        61 ---------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~  128 (152)
                               ..++.++|+||+||++|++++|+.||.+.      +..+....+......   +.....++.++.+++.+|
T Consensus       174 ~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~l  247 (331)
T cd05597         174 ILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------SLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRL  247 (331)
T ss_pred             HHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC------CHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHH
Confidence                     12345789999999999999999777654      333333333222221   222345789999999998


Q ss_pred             hccccCC--CcCHHHHhcCCCCCCC
Q 039869          129 FIRVHQL--RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       129 l~~~p~~--R~~~~~~l~h~~~~~~  151 (152)
                      |..+++.  |+++.++++||||.+.
T Consensus       248 l~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         248 ICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             ccCcccccCCCCHHHHhcCCCCCCC
Confidence            8654443  7899999999999753

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=2.5e-27  Score=167.27  Aligned_cols=135  Identities=18%  Similarity=0.147  Sum_probs=98.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++..++.++.|++.||+|||+.+++||||||+||+++.+   ..++++|||..                         
T Consensus       122 ~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~---~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~  198 (294)
T PHA02882        122 CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN---NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLY  198 (294)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CcEEEEEcCCceeeccCCcccccccccccccCCCcc
Confidence            35778899999999999999999999999999999999866   45567777632                         


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCC---hHHHHHHHHhcCCCCCCCCCCChhHHHHHHHh
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS---RDDLLELIAFSSEVPEFPSNISEDGRDFLSKC  128 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  128 (152)
                             .+..++.++|+||+||++|++++|+.||.+.......-   ..++...+....   .....+++++.+++..|
T Consensus       199 y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  275 (294)
T PHA02882        199 YAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK---IKIKNANKFIYDFIECV  275 (294)
T ss_pred             ccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh---hccCCCCHHHHHHHHHH
Confidence                   12224678999999999999999996765442110000   011112221111   12345688999999999


Q ss_pred             hccccCCCcCHHHHhc
Q 039869          129 FIRVHQLRWTAKHVLA  144 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~  144 (152)
                      +..+|++||++.++++
T Consensus       276 ~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        276 TKLSYEEKPDYDALIK  291 (294)
T ss_pred             HhCCCCCCCCHHHHHH
Confidence            9999999999999864

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.95  E-value=3.1e-27  Score=169.00  Aligned_cols=140  Identities=19%  Similarity=0.261  Sum_probs=99.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH--------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL--------------------------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~--------------------------   56 (152)
                      ..+++..++.++.|++.||+|||+++++||||||+||+++..+.   +++.+++                          
T Consensus        96 ~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (328)
T cd08226          96 EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGL---VSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVL  172 (328)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCc---EEEechHHHhhhhccCccccccccccccccCcc
Confidence            35788999999999999999999999999999999999986633   2322221                          


Q ss_pred             ------Hhhc--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc---------------------
Q 039869           57 ------QRHG--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS---------------------  107 (152)
Q Consensus        57 ------~~~~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  107 (152)
                            ...+  ..++.++|+||+||++|++++|+.|+....     ............                     
T Consensus       173 ~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (328)
T cd08226         173 PWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML-----RTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ  247 (328)
T ss_pred             CccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC-----hHHHHHHHhcCCCCCCccccccchhhhhhccch
Confidence                  0011  123567899999999999999997765432     111111111000                     


Q ss_pred             -----------------------CCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          108 -----------------------SEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       108 -----------------------~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                             ....+.+..++..+.+++++||..||++|||+.++++||||+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence                                   0001112345677899999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=6.2e-27  Score=164.57  Aligned_cols=143  Identities=24%  Similarity=0.369  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------RH   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------~~   59 (152)
                      ..+++..+..++.|++.||+|||+.+++|+||+|+||+++.+   ..++++||+.                       ..
T Consensus       100 ~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~  176 (287)
T cd06621         100 GRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK---GQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQ  176 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecC---CeEEEeeccccccccccccccccCCccccCHHHhc
Confidence            457889999999999999999999999999999999999876   4566666652                       12


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC------CCCChhHHHHHHHhhcccc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP------SNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~l~~~p  133 (152)
                      +..++.++|+||+|+++|++++|+.|+...... .....+......... .+.++      ..+++++.+++.+||..+|
T Consensus       177 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  254 (287)
T cd06621         177 GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-PLGPIELLSYIVNMP-NPELKDEPGNGIKWSEEFKDFIKQCLEKDP  254 (287)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-CCChHHHHHHHhcCC-chhhccCCCCCCchHHHHHHHHHHHcCCCc
Confidence            233466899999999999999999777654221 112223333322211 11111      2356789999999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~  150 (152)
                      ++||++.++++||||+.
T Consensus       255 ~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         255 TRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             ccCCCHHHHHhCccccc
Confidence            99999999999999965

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.94  E-value=1.3e-27  Score=168.66  Aligned_cols=140  Identities=26%  Similarity=0.376  Sum_probs=105.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++.++..++.|++.||.+||+.|++|+||+|+||+++.+   +.+++.||+.                         
T Consensus       110 ~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~  186 (293)
T cd06647         110 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV  186 (293)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC---CCEEEccCcceecccccccccccccCChhhcCchh
Confidence            357889999999999999999999999999999999999876   4556666551                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||||+++|++++|+.||....     ....+.............+..++..+.+++..||..+|++||
T Consensus       187 ~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  261 (293)
T cd06647         187 VTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN-----PLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG  261 (293)
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----hhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence            112334667999999999999999997775442     111111111111222223445678899999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.+++.|+||+.
T Consensus       262 ~~~~il~h~~~~~  274 (293)
T cd06647         262 SAKELLQHPFLKI  274 (293)
T ss_pred             CHHHHhcCHHHhc
Confidence            9999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.94  E-value=9.5e-27  Score=163.13  Aligned_cols=131  Identities=21%  Similarity=0.263  Sum_probs=103.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..+..++.|++.||+|||++|++||||||+||+++.+   ..++++|||..                         
T Consensus       120 ~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  196 (283)
T cd05091         120 TLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK---LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPE  196 (283)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC---CceEecccccccccccchheeeccCccCCccccCHH
Confidence            57888999999999999999999999999999999999866   45677777621                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+||++||+++ |..|+.+.      ...++...+.... ....+..++..+.+++..|++.+|++
T Consensus       197 ~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~  269 (283)
T cd05091         197 AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY------SNQDVIEMIRNRQ-VLPCPDDCPAWVYTLMLECWNEFPSR  269 (283)
T ss_pred             HHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHhCCCccc
Confidence              12234667999999999999998 66454443      4445555544333 34456789999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.+++.
T Consensus       270 RP~~~~i~~  278 (283)
T cd05091         270 RPRFKDIHS  278 (283)
T ss_pred             CCCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.94  E-value=4.2e-27  Score=166.71  Aligned_cols=132  Identities=20%  Similarity=0.327  Sum_probs=103.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.+++.++.|++.|++|||++|++||||||+||+++.+   ..++++|||..                        
T Consensus       119 ~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  195 (303)
T cd05088         119 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESL  195 (303)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC---CcEEeCccccCcccchhhhcccCCCcccccCHHHH
Confidence            358899999999999999999999999999999999999876   45566666522                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..++.++|+||+|+++|++++ |..|+.+.      ...+....... ......+..++.++.+++.+||+.+|++||
T Consensus       196 ~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  268 (303)
T cd05088         196 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM------TCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERP  268 (303)
T ss_pred             hccCCcccccchhhhhHHHHHHhcCCCCcccC------ChHHHHHHHhc-CCcCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            12234678999999999999998 88666544      33344443332 223345566889999999999999999999


Q ss_pred             CHHHHhc
Q 039869          138 TAKHVLA  144 (152)
Q Consensus       138 ~~~~~l~  144 (152)
                      ++.++++
T Consensus       269 ~~~~il~  275 (303)
T cd05088         269 SFAQILV  275 (303)
T ss_pred             CHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=1e-26  Score=160.72  Aligned_cols=136  Identities=23%  Similarity=0.274  Sum_probs=108.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.++..++.|++.||++||+.|++|+||+|+||+++.+   ..++++||+..                        
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~  172 (256)
T cd08221          96 QLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKA---GLIKLGDFGISKILGSEYSMAETVVGTPYYMSPEL  172 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCC---CCEEECcCcceEEcccccccccccCCCccccCHhh
Confidence            458899999999999999999999999999999999999877   45666666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+...+.++|+||+|+++|++++|..|+...      ...+....+..+.. ...+..++.++.+++.+||..+|++||
T Consensus       173 ~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~  245 (256)
T cd08221         173 CQGVKYNFKSDIWALGCVLYELLTLKRTFDAT------NPLNLVVKIVQGNY-TPVVSVYSSELISLVHSLLQQDPEKRP  245 (256)
T ss_pred             cCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCC-CCCccccCHHHHHHHHHHcccCcccCC
Confidence             1223456799999999999999999776543      33444444433332 334567889999999999999999999


Q ss_pred             CHHHHhcCCCC
Q 039869          138 TAKHVLAHPFP  148 (152)
Q Consensus       138 ~~~~~l~h~~~  148 (152)
                      ++.++++|+|+
T Consensus       246 s~~~ll~~~~l  256 (256)
T cd08221         246 TADEVLDQPLL  256 (256)
T ss_pred             CHHHHhhCcCC
Confidence            99999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=4.7e-27  Score=165.34  Aligned_cols=138  Identities=24%  Similarity=0.338  Sum_probs=100.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.|++.||.|||..+++|+||||+||+++.+   +.++++|||...                       
T Consensus        98 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  174 (291)
T cd07870          98 GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYL---GELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDV  174 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCC---CcEEEeccccccccCCCCCCCCCccccccccCCce
Confidence            457788999999999999999999999999999999999876   566777776221                       


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-Hh-c--------------CCCCC-----C--
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AF-S--------------SEVPE-----F--  113 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~--------------~~~~~-----~--  113 (152)
                         +..++.++|+||+|+++|++++|..||.+..     ...+..... .. +              ...+.     .  
T Consensus       175 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (291)
T cd07870         175 LLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS-----DVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQ  249 (291)
T ss_pred             eecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch-----hHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCc
Confidence               1123557899999999999999997765432     111111110 00 0              00000     0  


Q ss_pred             -------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          114 -------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       114 -------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                             ....+.++.+++.+|+..||++|||+.+++.||||
T Consensus       250 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         250 QLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             chhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                   01135678999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.94  E-value=6.5e-27  Score=164.83  Aligned_cols=140  Identities=26%  Similarity=0.347  Sum_probs=102.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------h
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------H   59 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------~   59 (152)
                      +++..++.++.||+.||+|||+++++|+||+|+||+++..+  ..++++||+..                         .
T Consensus        99 ~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~  176 (294)
T PLN00009         99 KNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILL  176 (294)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC--CEEEEcccccccccCCCccccccCceeecccCHHHHh
Confidence            57888999999999999999999999999999999997532  23455555411                         1


Q ss_pred             c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC----------------------CC----C
Q 039869           60 G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE----------------------VP----E  112 (152)
Q Consensus        60 ~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~----~  112 (152)
                      + ..++.++|+||+|+++|++++|..|+....     ....+.........                      ..    .
T Consensus       177 ~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (294)
T PLN00009        177 GSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDS-----EIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLAT  251 (294)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHH
Confidence            1 224568999999999999999997665442     22222221110000                      00    0


Q ss_pred             CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .....+.++.+++.+||+.+|++||++.++++||||++.
T Consensus       252 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        252 VVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             hCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence            123467889999999999999999999999999999863

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=5.5e-27  Score=163.26  Aligned_cols=132  Identities=17%  Similarity=0.298  Sum_probs=104.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..+..++.|++.||+|||+++++|+||||+||+++.+   ..++++|||...                       
T Consensus       108 ~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p  184 (273)
T cd05035         108 EKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED---MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI  184 (273)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC---CeEEECCccceeeccccccccccccccCCccccCH
Confidence            357899999999999999999999999999999999999876   556677776321                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++|+||+||++||+++ |..|+.+.      ...++...+... ..+..+..++.++.+++.+||+.||+
T Consensus       185 e~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~  257 (273)
T cd05035         185 ESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV------ENHEIYDYLRHG-NRLKQPEDCLDELYDLMYSCWRADPK  257 (273)
T ss_pred             hhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCcCCCHHHHHHHHHHcCCChh
Confidence                1224567999999999999999 66555433      444454444433 34456778899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       258 ~Rp~~~e~~~  267 (273)
T cd05035         258 DRPTFTKLRE  267 (273)
T ss_pred             hCcCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.94  E-value=8.9e-27  Score=160.32  Aligned_cols=135  Identities=27%  Similarity=0.409  Sum_probs=108.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..+..++.|++.||.+||+.+++|+||+|+||+++.+   +.+++++|+..                        
T Consensus        88 ~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~  164 (250)
T cd05123          88 GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD---GHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEV  164 (250)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC---CcEEEeecCcceecccCCCcccCCcCCccccChHH
Confidence            468899999999999999999999999999999999999876   44556655421                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+...+.++|+||+|+++|++++|..|+...      +.......+..  ....++...+..+.+++.+||..||++||
T Consensus       165 ~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~------~~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~R~  236 (250)
T cd05123         165 LLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE------DRKEIYEKILK--DPLRFPEFLSPEARDLISGLLQKDPTKRL  236 (250)
T ss_pred             hCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhhCC
Confidence             1222356799999999999999999766443      33333333332  34556777899999999999999999999


Q ss_pred             CH---HHHhcCCCC
Q 039869          138 TA---KHVLAHPFP  148 (152)
Q Consensus       138 ~~---~~~l~h~~~  148 (152)
                      ++   .++++||||
T Consensus       237 ~~~~~~~l~~~~~f  250 (250)
T cd05123         237 GSGGAEEIKAHPFF  250 (250)
T ss_pred             CcccHHHHHhCCCC
Confidence            99   899999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.94  E-value=6.7e-27  Score=170.15  Aligned_cols=134  Identities=17%  Similarity=0.274  Sum_probs=102.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.||+.||+|||+++++||||||+||+++.+   ..++++|||..                        
T Consensus       209 ~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  285 (375)
T cd05104         209 LALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIRNDSNYVVKGNARLPVKWMAP  285 (375)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC---CcEEEecCccceeccCcccccccCCCCCCcceeCh
Confidence            368899999999999999999999999999999999999876   55667777621                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+|||||++|++++ |..|+....     ........+.. ......+...+.++.+++..||+.||+
T Consensus       286 E~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~  359 (375)
T cd05104         286 ESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP-----VDSKFYKMIKE-GYRMLSPECAPSEMYDIMKSCWDADPL  359 (375)
T ss_pred             hHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC-----chHHHHHHHHh-CccCCCCCCCCHHHHHHHHHHccCChh
Confidence               12234678999999999999998 664544331     22333333332 223344566788999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.++++.
T Consensus       360 ~RPs~~eil~~  370 (375)
T cd05104         360 KRPTFKQIVQL  370 (375)
T ss_pred             HCcCHHHHHHH
Confidence            99999998753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.7e-27  Score=162.18  Aligned_cols=136  Identities=31%  Similarity=0.440  Sum_probs=107.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.|||+.+++|+||+|+||+++.+   +.++++|||..                        
T Consensus       101 ~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  177 (264)
T cd06653         101 GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMS  177 (264)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC---CCEEECccccccccccccccCccccccCCcccccC
Confidence            568899999999999999999999999999999999999876   44555665422                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          .+...+.++|+||+||++|++++|+.|+...      ...............+.+|..+++.+.+++.+|+. +|.
T Consensus       178 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~  250 (264)
T cd06653         178 PEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY------EAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEK  250 (264)
T ss_pred             HhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc------CHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-Ccc
Confidence                1222456789999999999999999666443      22233333333444566788899999999999999 479


Q ss_pred             CCcCHHHHhcCCCC
Q 039869          135 LRWTAKHVLAHPFP  148 (152)
Q Consensus       135 ~R~~~~~~l~h~~~  148 (152)
                      .||++.+++.|||.
T Consensus       251 ~r~~~~~~~~~~~~  264 (264)
T cd06653         251 RRPTAEFLLRHPFV  264 (264)
T ss_pred             cCccHHHHhcCCCC
Confidence            99999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=7.2e-27  Score=163.82  Aligned_cols=138  Identities=28%  Similarity=0.385  Sum_probs=101.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.|++.||+|||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  171 (286)
T cd07846          95 NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPEL  171 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC---CcEEEEeeeeeeeccCCccccCcccceeeccCcHH
Confidence            358899999999999999999999999999999999999877   45566665521                        


Q ss_pred             -h-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-------------------cCCCC------
Q 039869           59 -H-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-------------------SSEVP------  111 (152)
Q Consensus        59 -~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~------  111 (152)
                       . ...++.++|+||+|+++|++++|..++....     ...........                   ....+      
T Consensus       172 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07846         172 LVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS-----DIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIE  246 (286)
T ss_pred             hccccccCchHhHHHHHHHHHHHHcCCCCCCCCc-----hHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcc
Confidence             0 1223567999999999999999986654331     11111110000                   00000      


Q ss_pred             ---CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 ---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 ---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                         .....++..+.+++.+||..+|++||++.++++||||
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         247 PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             hHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence               1123568889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.94  E-value=7.4e-27  Score=160.33  Aligned_cols=135  Identities=31%  Similarity=0.481  Sum_probs=103.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      +++++..+..++.|++.+|++||++|++|+||+|+||+++.+   +.+++.+|+.                        .
T Consensus        93 ~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~  169 (253)
T cd05122          93 QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD---GEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVI  169 (253)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccC---CeEEEeeccccccccccccccceecCCcccCHHHH
Confidence            468999999999999999999999999999999999999876   4455555541                        1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCC--CChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSN--ISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+...+.++|+||+|+++|++++|..|+...      +.......... ...+..+..  ++..+.+++..||..||++|
T Consensus       170 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  242 (253)
T cd05122         170 NGKPYDYKADIWSLGITAIELAEGKPPYSEL------PPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKR  242 (253)
T ss_pred             cCCCCCccccHHHHHHHHHHHHhCCCCCCCC------chHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhC
Confidence            1222466799999999999999999665443      22222222221 222333333  48899999999999999999


Q ss_pred             cCHHHHhcCCC
Q 039869          137 WTAKHVLAHPF  147 (152)
Q Consensus       137 ~~~~~~l~h~~  147 (152)
                      |++.++++|||
T Consensus       243 ~t~~~~l~~~~  253 (253)
T cd05122         243 PTAEQLLKHPF  253 (253)
T ss_pred             CCHHHHhcCCC
Confidence            99999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=8.9e-27  Score=162.14  Aligned_cols=132  Identities=17%  Similarity=0.255  Sum_probs=103.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.+++.++.|++.||+|||+++++||||||+||+++.+   ..+++++|+.                         
T Consensus       102 ~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  178 (266)
T cd05064         102 GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSD---LVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPE  178 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCC---CcEEECCCcccccccccchhcccCCCCceeecCHH
Confidence            468999999999999999999999999999999999999876   3444555441                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||+||++|++++ |..|+++.      ........+.... ..+.+..++..+.+++..||..+|++
T Consensus       179 ~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~c~~~~p~~  251 (266)
T cd05064         179 AIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM------SGQDVIKAVEDGF-RLPAPRNCPNLLHQLMLDCWQKERGE  251 (266)
T ss_pred             HHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC------CHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHcCCCchh
Confidence             123334678999999999999775 88666554      4444545444332 33456788999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       252 RP~~~~i~~  260 (266)
T cd05064         252 RPRFSQIHS  260 (266)
T ss_pred             CCCHHHHHH
Confidence            999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.94  E-value=5e-28  Score=177.86  Aligned_cols=132  Identities=20%  Similarity=0.355  Sum_probs=111.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      .|+..++..|++||++|+.|||.++|||+|||..||++.+.   ..|+|+|||.                          
T Consensus       484 kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~---~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPE  560 (678)
T KOG0193|consen  484 KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED---LKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPE  560 (678)
T ss_pred             hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccC---CcEEEecccceeeeeeeccccccCCCccchhhhcHH
Confidence            47788999999999999999999999999999999999877   7889999982                          


Q ss_pred             ----hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC---CCCCCChhHHHHHHHhhc
Q 039869           58 ----RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE---FPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        58 ----~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~l~  130 (152)
                          ....+++..+||||||+++|||++|..|+-..      ..+.+..++..+...++   ...+++.++.+|+..||.
T Consensus       561 vIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~------~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~  634 (678)
T KOG0193|consen  561 VIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ------NRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWK  634 (678)
T ss_pred             HHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC------ChhheEEEecccccCccchhhhccCHHHHHHHHHHHHh
Confidence                22344688999999999999999999666533      66777777777754443   346688899999999999


Q ss_pred             cccCCCcCHHHHhc
Q 039869          131 RVHQLRWTAKHVLA  144 (152)
Q Consensus       131 ~~p~~R~~~~~~l~  144 (152)
                      +++++||.+.+++.
T Consensus       635 ~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  635 FDREERPLFPQLLS  648 (678)
T ss_pred             cCcccCccHHHHHH
Confidence            99999999999874

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=5.8e-27  Score=164.18  Aligned_cols=137  Identities=28%  Similarity=0.456  Sum_probs=101.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------hh
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------RH   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~~   59 (152)
                      .+++..++.++.|++.||++||+.+++|+||+|+||+++.+   ..++++||+.                        ..
T Consensus       103 ~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~  179 (287)
T cd07838         103 GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD---GQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLL  179 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccC---CCEEEeccCcceeccCCcccccccccccccChHHhc
Confidence            58899999999999999999999999999999999999887   5566666652                        12


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--------------------CC----CCCCC
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--------------------EV----PEFPS  115 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~----~~~~~  115 (152)
                      +...+.++|+||+|+++|++++|..|+.+..     .............                    ..    .....
T Consensus       180 ~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (287)
T cd07838         180 QSSYATPVDMWSVGCIFAELFRRRPLFRGTS-----EADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVP  254 (287)
T ss_pred             cCCCCCcchhhhHHHHHHHHHhCCCcccCCC-----hHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhh
Confidence            2334668999999999999999986554431     1111111111000                    00    00012


Q ss_pred             CCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          116 NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       116 ~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      ..+..+.+++.+||+.||++||++.+++.||||
T Consensus       255 ~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         255 EICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            345678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.94  E-value=1.2e-26  Score=163.09  Aligned_cols=130  Identities=22%  Similarity=0.318  Sum_probs=102.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      .+++.++..++.|++.||+|||.+|++||||||+||+++.+   +.++++||+.                          
T Consensus       116 ~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  192 (288)
T cd05093         116 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE  192 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC---CcEEeccCCccccccCCceeecCCCCCccccccCHH
Confidence            48999999999999999999999999999999999999876   4555665542                          


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+|||||++|++++ |..|+...      ........+..+. ....+..++.++.+++.+||+.+|.+
T Consensus       193 ~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~------~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~  265 (288)
T cd05093         193 SIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL------SNNEVIECITQGR-VLQRPRTCPKEVYDLMLGCWQREPHM  265 (288)
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHccCChhh
Confidence             122334678999999999999998 77555443      3444444444333 23455678899999999999999999


Q ss_pred             CcCHHHHh
Q 039869          136 RWTAKHVL  143 (152)
Q Consensus       136 R~~~~~~l  143 (152)
                      ||++.+++
T Consensus       266 Rpt~~~v~  273 (288)
T cd05093         266 RLNIKEIH  273 (288)
T ss_pred             CCCHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=7.1e-27  Score=163.90  Aligned_cols=138  Identities=27%  Similarity=0.447  Sum_probs=103.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.+++.++.|++.||+|||..+++|+|++|+||+++.+   +.++++||+..                        
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE  171 (288)
T cd07833          95 GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSES---GVLKLCDFGFARALRARPASPLTDYVATRWYRAPE  171 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC---CCEEEEeeecccccCCCccccccCcccccCCcCCc
Confidence            458899999999999999999999999999999999999876   45566665511                        


Q ss_pred             --hcC-CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cC------------------CCC-----
Q 039869           59 --HGL-LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SS------------------EVP-----  111 (152)
Q Consensus        59 --~~~-~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~-----  111 (152)
                        .+. .++.++|+||+|+++|++++|..|+.+..     ....+...... +.                  ..+     
T Consensus       172 ~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (288)
T cd07833         172 LLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDS-----DIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQP  246 (288)
T ss_pred             hhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCc
Confidence              112 45678999999999999999996654431     11111111100 00                  000     


Q ss_pred             -----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 -----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 -----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                           ..+..++.++.+++++||..+|++||++.++++||||
T Consensus       247 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         247 ESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             HHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                 1223458889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=1.2e-26  Score=161.28  Aligned_cols=135  Identities=21%  Similarity=0.297  Sum_probs=103.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||.|||++|++|+||+|+||+++.+   ..++++||+..                        
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~  177 (267)
T cd08229         101 RLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER  177 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC---CCEEECcchhhhccccCCcccccccCCcCccCHHH
Confidence            457899999999999999999999999999999999999877   45666666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+...+.++|+||+|+++|++++|..|+.+...    ........+......+..+..++..+.+++.+|+..+|++||
T Consensus       178 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  253 (267)
T cd08229         178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP  253 (267)
T ss_pred             hcCCCccchhhHHHHHHHHHHHHhCCCCcccccc----hHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCC
Confidence             122235678999999999999999977755421    223333333333333333345888999999999999999999


Q ss_pred             CHHHHhc
Q 039869          138 TAKHVLA  144 (152)
Q Consensus       138 ~~~~~l~  144 (152)
                      ++.++++
T Consensus       254 t~~~i~~  260 (267)
T cd08229         254 DITYVYD  260 (267)
T ss_pred             CHHHHHH
Confidence            9997763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.94  E-value=8.4e-27  Score=167.91  Aligned_cols=140  Identities=24%  Similarity=0.325  Sum_probs=104.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------c
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------G   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------~   60 (152)
                      +.+++..++.++.|++.||+|||+.|++|+||||+||+++.+   +.++++||+...                      +
T Consensus       115 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         115 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCC---CCEEEecccccccccccccccccCCCccCHHHHhC
Confidence            458899999999999999999999999999999999999877   456677766211                      1


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-----------------------HhcCCCC-----
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-----------------------AFSSEVP-----  111 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~-----  111 (152)
                       ..++.++|+||+||++|++++|+.|+.....     ...+....                       ......+     
T Consensus       192 ~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (345)
T cd07877         192 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-----IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA  266 (345)
T ss_pred             ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh
Confidence             2345679999999999999999977654321     11111000                       0000001     


Q ss_pred             CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ......+.++.+++..||..+|++||++.+++.||||++
T Consensus       267 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         267 NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence            111246788999999999999999999999999999985

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.94  E-value=9.2e-27  Score=164.48  Aligned_cols=138  Identities=22%  Similarity=0.233  Sum_probs=102.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++.+++.++.|++.||+|||+.|++|+||+|+||+++.+   ..++++||+...                       
T Consensus       111 ~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE  187 (302)
T cd07864         111 VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK---GQIKLADFGLARLYNSEESRPYTNKVITLWYRPPE  187 (302)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---CcEEeCcccccccccCCcccccccceeccCccChH
Confidence            368999999999999999999999999999999999999877   455666665211                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHH--HHHhcCCC-----------------------
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE--LIAFSSEV-----------------------  110 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------------  110 (152)
                          ....+.++|+||+||++|++++|+.|+....     ....+..  ........                       
T Consensus       188 ~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (302)
T cd07864         188 LLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-----ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRR  262 (302)
T ss_pred             HhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCChhhccccccccccccccccccccc
Confidence                1123567999999999999999996664331     1111111  11000000                       


Q ss_pred             --CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          111 --PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       111 --~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                        ......++..+.+++.+||..+|++||++.+++.||||
T Consensus       263 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         263 RLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             chhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence              00122468899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=1.2e-26  Score=160.83  Aligned_cols=137  Identities=32%  Similarity=0.446  Sum_probs=105.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.|++.||++||+.+++|+||+|+||+++.+   +.+++++|+...                       
T Consensus        94 ~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (264)
T cd06626          94 RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN---GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYM  170 (264)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEEcccccccccCCCCCcccccccCCcCCcCcc
Confidence            457899999999999999999999999999999999999876   556666665111                       


Q ss_pred             ------cC---CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCC--CChhHHHHHHHh
Q 039869           60 ------GL---LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSN--ISEDGRDFLSKC  128 (152)
Q Consensus        60 ------~~---~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~  128 (152)
                            +.   ..+.++|+||+|+++|++++|+.||....     ........... ...+.+|..  ++..+.+++..|
T Consensus       171 ~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~  244 (264)
T cd06626         171 APEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD-----NEFQIMFHVGA-GHKPPIPDSLQLSPEGKDFLDRC  244 (264)
T ss_pred             ChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc-----chHHHHHHHhc-CCCCCCCcccccCHHHHHHHHHH
Confidence                  11   14567899999999999999997764432     22222222222 223334444  488999999999


Q ss_pred             hccccCCCcCHHHHhcCCCC
Q 039869          129 FIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~h~~~  148 (152)
                      |..+|++||++.+++.|||+
T Consensus       245 l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         245 LESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ccCCcccCCCHHHHhcCCCC
Confidence            99999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=9.3e-27  Score=163.09  Aligned_cols=138  Identities=22%  Similarity=0.375  Sum_probs=101.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||+|||+.|++|+||+|+||+++.+   ..+++.+++..                        
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~  171 (284)
T cd07836          95 GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKR---GELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDV  171 (284)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC---CcEEEeecchhhhhcCCccccccccccccccChHH
Confidence            468999999999999999999999999999999999999876   34455554311                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh---------------cCCCCC---------
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF---------------SSEVPE---------  112 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~---------  112 (152)
                        .+..++.++|+||+|+++|++++|+.|+.+...     ..........               ......         
T Consensus       172 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd07836         172 LLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN-----EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDL  246 (284)
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHH
Confidence              112235679999999999999999977655421     1111111100               000000         


Q ss_pred             --CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          113 --FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       113 --~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                        .....+..+.+++.+|+..+|.+||++.++++||||
T Consensus       247 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         247 QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence              112457788999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=1.6e-26  Score=159.58  Aligned_cols=134  Identities=19%  Similarity=0.275  Sum_probs=107.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++.+++.++.|++.||++||+++++|+||+|+||+++.+   ..++++||+..                       
T Consensus        99 ~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  175 (262)
T cd00192          99 KSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED---LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMA  175 (262)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC---CcEEEcccccccccccccccccccCCCcCccccC
Confidence            3678999999999999999999999999999999999999887   55666666521                       


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhc-CcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTA-EISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||+|+++|+++++ ..|+...      ....+...+.. ......+..++.++.+++.+||..+|
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p  248 (262)
T cd00192         176 PESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL------SNEEVLEYLRK-GYRLPKPEYCPDELYELMLSCWQLDP  248 (262)
T ss_pred             HHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHc-CCCCCCCccCChHHHHHHHHHccCCc
Confidence                122346679999999999999995 6455443      44555555543 33445677789999999999999999


Q ss_pred             CCCcCHHHHhcC
Q 039869          134 QLRWTAKHVLAH  145 (152)
Q Consensus       134 ~~R~~~~~~l~h  145 (152)
                      ++||++.+++.+
T Consensus       249 ~~Rps~~~l~~~  260 (262)
T cd00192         249 EDRPTFSELVER  260 (262)
T ss_pred             ccCcCHHHHHHh
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.94  E-value=1.8e-26  Score=159.43  Aligned_cols=136  Identities=26%  Similarity=0.327  Sum_probs=104.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------Hh
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------QR   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------~~   58 (152)
                      .+++..+..++.|++.||+|||+.+++|+||+|+||+++.++  ..+++++++                         ..
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~  174 (257)
T cd08225          97 LFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG--MVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEIC  174 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC--CeEEecccccchhccCCcccccccCCCccccCHHHH
Confidence            478999999999999999999999999999999999997653  123444443                         11


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++|+||+|++++++++|..|+...      +.......... ......+..++.++.+++.+|+..+|++||+
T Consensus       175 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt  247 (257)
T cd08225         175 QNRPYNNKTDIWSLGCVLYELCTLKHPFEGN------NLHQLVLKICQ-GYFAPISPNFSRDLRSLISQLFKVSPRDRPS  247 (257)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHhc-ccCCCCCCCCCHHHHHHHHHHhccChhhCcC
Confidence            2233467899999999999999999776543      22333333222 2233445567889999999999999999999


Q ss_pred             HHHHhcCCCC
Q 039869          139 AKHVLAHPFP  148 (152)
Q Consensus       139 ~~~~l~h~~~  148 (152)
                      +.+++.||||
T Consensus       248 ~~~ll~~~~~  257 (257)
T cd08225         248 ITSILKRPFL  257 (257)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.94  E-value=1.1e-26  Score=159.87  Aligned_cols=150  Identities=25%  Similarity=0.346  Sum_probs=108.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec-CCCchhHHHHHHHH------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~------------------------   57 (152)
                      +.++...+++|.-||+.|+.|||++-++||||||+||++-. ....+.++|+|+|.                        
T Consensus       127 ~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR  206 (438)
T KOG0666|consen  127 KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR  206 (438)
T ss_pred             ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEec
Confidence            35788899999999999999999999999999999999953 33457889998872                        


Q ss_pred             -----hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----CChHHHHHHHHhcCCC-----CC---CC------
Q 039869           58 -----RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----ASRDDLLELIAFSSEV-----PE---FP------  114 (152)
Q Consensus        58 -----~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----~~---~~------  114 (152)
                           .....|+.+.|+||+||+++|+++..+.|.+....-.    ...+.+.+.......+     |.   +|      
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l  286 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL  286 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence                 2233457889999999999999999866654332211    1111121111111100     00   00      


Q ss_pred             --------------------CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCCC
Q 039869          115 --------------------SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE  152 (152)
Q Consensus       115 --------------------~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~~  152 (152)
                                          ..-++...+++.++|.+||-+|.|++++++|+||.+++
T Consensus       287 s~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~  344 (438)
T KOG0666|consen  287 SDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP  344 (438)
T ss_pred             HHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence                                11244589999999999999999999999999999874

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.94  E-value=1.3e-26  Score=163.13  Aligned_cols=130  Identities=22%  Similarity=0.287  Sum_probs=101.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      .+++..++.++.|++.||++||+++++|+||||+||+++.+   +.++++||+.                          
T Consensus       119 ~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE  195 (291)
T cd05094         119 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE  195 (291)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC---CcEEECCCCcccccCCCceeecCCCCCcceeecChH
Confidence            47889999999999999999999999999999999999876   4556666552                          


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||+|+++|++++ |..|+...      ...+....... ...+..+..++..+.+++.+||..+|++
T Consensus       196 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~  268 (291)
T cd05094         196 SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL------SNTEVIECITQ-GRVLERPRVCPKEVYDIMLGCWQREPQQ  268 (291)
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhC-CCCCCCCccCCHHHHHHHHHHcccChhh
Confidence             122334567999999999999998 77655443      33444444432 2333455678899999999999999999


Q ss_pred             CcCHHHHh
Q 039869          136 RWTAKHVL  143 (152)
Q Consensus       136 R~~~~~~l  143 (152)
                      ||++.+++
T Consensus       269 Rpt~~~v~  276 (291)
T cd05094         269 RLNIKEIY  276 (291)
T ss_pred             CcCHHHHH
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.94  E-value=3.7e-27  Score=168.92  Aligned_cols=140  Identities=22%  Similarity=0.276  Sum_probs=106.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||+|||+++++||||||+||+++.+   +.++++|||..                        
T Consensus        97 ~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE  173 (331)
T cd05624          97 DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMN---GHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPE  173 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCC---CCEEEEeccceeeccCCCceeeccccCCcccCCHH
Confidence            568899999999999999999999999999999999999877   45666776521                        


Q ss_pred             --hc-----CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC---CCCCChhHHHHHHHh
Q 039869           59 --HG-----LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF---PSNISEDGRDFLSKC  128 (152)
Q Consensus        59 --~~-----~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~  128 (152)
                        .+     ..++.++|+||+|+++|++++|+.||...      +..+....+........+   ...++.++.+++.+|
T Consensus       174 ~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~------~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~l  247 (331)
T cd05624         174 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE------SLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRL  247 (331)
T ss_pred             HHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC------CHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHH
Confidence              11     12456789999999999999999887654      333443333322222222   245689999999999


Q ss_pred             hccccCC--CcCHHHHhcCCCCCCC
Q 039869          129 FIRVHQL--RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       129 l~~~p~~--R~~~~~~l~h~~~~~~  151 (152)
                      +...+++  |+++.+++.||||+..
T Consensus       248 l~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         248 ICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             ccCchhhcCCCCHHHHhcCCCcCCC
Confidence            9876554  4689999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.94  E-value=1.6e-26  Score=161.60  Aligned_cols=132  Identities=21%  Similarity=0.289  Sum_probs=104.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.++..++.|++.||++||++|++|+||||+||+++.+   ..++++||+..                        
T Consensus       117 ~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (280)
T cd05049         117 GELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD---LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPP  193 (280)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC---CeEEECCcccceecccCcceecCCCCcccceecCh
Confidence            357889999999999999999999999999999999999876   55566665521                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++|++++ |..|+...      ...+....+..+. ....+..++..+.+++.+||..+|+
T Consensus       194 E~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~  266 (280)
T cd05049         194 ESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL------SNEEVIECITQGR-LLQRPRTCPSEVYDIMLGCWKRDPQ  266 (280)
T ss_pred             hhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCCcc
Confidence               22334667999999999999998 88777654      3344444444322 3344567899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       267 ~Rp~~~eil~  276 (280)
T cd05049         267 QRINIKDIHE  276 (280)
T ss_pred             cCCCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.8e-26  Score=158.96  Aligned_cols=136  Identities=29%  Similarity=0.460  Sum_probs=108.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++..+..++.|++.||.+||++|++|+||+|+||+++.+   +.+++.|++.                         
T Consensus        94 ~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~  170 (254)
T cd06627          94 GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKD---GVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEV  170 (254)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCC---CCEEEeccccceecCCCcccccccccchhhcCHhh
Confidence            468899999999999999999999999999999999999875   4556666651                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+...+.++|+||+|+++|++++|..|+...      .......... ....+..+...+..+.+++.+||..+|++||
T Consensus       171 ~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  243 (254)
T cd06627         171 IEMSGASTASDIWSLGCTVIELLTGNPPYYDL------NPMAALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPNLRP  243 (254)
T ss_pred             hcCCCCCcchhHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChhhCc
Confidence            12223467899999999999999999666543      2222222222 2334456777899999999999999999999


Q ss_pred             CHHHHhcCCCC
Q 039869          138 TAKHVLAHPFP  148 (152)
Q Consensus       138 ~~~~~l~h~~~  148 (152)
                      ++.+++.||||
T Consensus       244 ~~~~~l~~~~~  254 (254)
T cd06627         244 TAKQLLKHPWI  254 (254)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.94  E-value=4.2e-27  Score=184.82  Aligned_cols=139  Identities=12%  Similarity=0.088  Sum_probs=99.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC----------------CchhHHHHHHHH---------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK----------------DAHEAEISAFLQ---------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~----------------~~~~~~l~~~~~---------   57 (152)
                      .++++.+++.+++||+.||+|||++||+||||||+|||++..+                ....++++|||.         
T Consensus        75 ~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~  154 (793)
T PLN00181         75 RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSE  154 (793)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccc
Confidence            4589999999999999999999999999999999999995311                113445555542         


Q ss_pred             --------------------------------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH
Q 039869           58 --------------------------------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA  105 (152)
Q Consensus        58 --------------------------------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (152)
                                                      ..+..++.++|||||||++|||+++..|+...        ........
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~--------~~~~~~~~  226 (793)
T PLN00181        155 RRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK--------SRTMSSLR  226 (793)
T ss_pred             cchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH--------HHHHHHHH
Confidence                                            12333577899999999999999987443211        11111111


Q ss_pred             hcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          106 FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .....+. .........+++..||..+|.+||++.++++||||.+
T Consensus       227 ~~~~~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        227 HRVLPPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             HhhcChh-hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            1111111 1122455678999999999999999999999999965

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.94  E-value=2.8e-26  Score=161.27  Aligned_cols=138  Identities=20%  Similarity=0.306  Sum_probs=106.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .++...+..++.|++.||+|||+++++||||||+||+++.+   +.++++||+..                         
T Consensus       115 ~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~---~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE  191 (288)
T cd05061         115 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE  191 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC---CcEEECcCCccccccccccccccCCCcccccccCHH
Confidence            34667889999999999999999999999999999999877   45566666521                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+||++|++++ +..|+.+.      ...+....+..+ ..+..+...++.+.+++.+||+.+|++
T Consensus       192 ~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~  264 (288)
T cd05061         192 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL------SNEQVLKFVMDG-GYLDQPDNCPERVTDLMRMCWQFNPKM  264 (288)
T ss_pred             HhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhH
Confidence              12233667999999999999998 55444332      444444443322 233456677899999999999999999


Q ss_pred             CcCHHHHhc------CCCCCCC
Q 039869          136 RWTAKHVLA------HPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~------h~~~~~~  151 (152)
                      ||++.++++      ||||++-
T Consensus       265 Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         265 RPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CcCHHHHHHHHHhhcCCCCCCC
Confidence            999999875      9999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1e-26  Score=167.39  Aligned_cols=140  Identities=26%  Similarity=0.365  Sum_probs=105.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------c
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------G   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------~   60 (152)
                      ..+++..++.++.|++.||+|||+.|++|+||||+||+++.+   +.++++|||...                      +
T Consensus       113 ~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (343)
T cd07880         113 EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNED---CELKILDFGLARQTDSEMTGYVVTRWYRAPEVILN  189 (343)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEeecccccccccCccccccCCcccCHHHHhC
Confidence            468899999999999999999999999999999999999876   456677766221                      1


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc------------------------CC----CC
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS------------------------SE----VP  111 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~----~~  111 (152)
                       ..++.++|+||+|+++|++++|..||.+..     ............                        ..    ..
T Consensus       190 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (343)
T cd07880         190 WMHYTQTVDIWSVGCIMAEMLTGKPLFKGHD-----HLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFR  264 (343)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHH
Confidence             224567999999999999999997765432     111111110000                        00    00


Q ss_pred             CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .....++..+.+++.+||..||++||++.+++.||||+.
T Consensus       265 ~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         265 SLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             HhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence            122457788999999999999999999999999999975

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.9e-26  Score=160.96  Aligned_cols=131  Identities=19%  Similarity=0.328  Sum_probs=104.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..+..++.|++.||.|||+.+++|+||||+||+++.+   +.++++||+..                         
T Consensus       115 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05032         115 PPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED---LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE  191 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC---CCEEECCcccchhhccCcccccCCCCCccccccCHH
Confidence            46788999999999999999999999999999999999877   45566666521                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+|||||++|++++ |..|+.+.      +..+...... .......+..++.++.+++.+||..+|++
T Consensus       192 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~  264 (277)
T cd05032         192 SLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL------SNEEVLKFVI-DGGHLDLPENCPDKLLELMRMCWQYNPKM  264 (277)
T ss_pred             HHhcCCCCcccchHHHHHHHHHhhccCCCCCccC------CHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence              12234667999999999999998 77555443      4455555554 33345567778999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      |||+.++++
T Consensus       265 Rpt~~~l~~  273 (277)
T cd05032         265 RPTFLEIVS  273 (277)
T ss_pred             CCCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=2.1e-26  Score=161.20  Aligned_cols=132  Identities=18%  Similarity=0.266  Sum_probs=102.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.++..++.|++.||+|||+++++|+||||+||+++.+   +.++++|||..                        
T Consensus       104 ~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~---~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (279)
T cd05109         104 DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP---NHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL  180 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC---CcEEECCCCceeecccccceeecCCCccchhhCCH
Confidence            468999999999999999999999999999999999999776   45667776621                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+|||||++||+++ |..|+...      ....+...+.. ...+..+..++.++.+++.+||..||+
T Consensus       181 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~  253 (279)
T cd05109         181 ESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI------PAREIPDLLEK-GERLPQPPICTIDVYMIMVKCWMIDSE  253 (279)
T ss_pred             HHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHC-CCcCCCCccCCHHHHHHHHHHcCCChh
Confidence               12223567899999999999998 66444332      34444444433 223345567899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.+++.
T Consensus       254 ~Rp~~~~l~~  263 (279)
T cd05109         254 CRPRFRELVD  263 (279)
T ss_pred             hCcCHHHHHH
Confidence            9999999873

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=8.4e-27  Score=165.54  Aligned_cols=145  Identities=25%  Similarity=0.383  Sum_probs=103.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec-CCCchhHHHHHHHHhh-----------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .+++..++.++.|++.||+|||+.+++|+||||+||+++. +...+.++++||+...                       
T Consensus       104 ~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  183 (316)
T cd07842         104 SIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRA  183 (316)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccC
Confidence            6889999999999999999999999999999999999987 1112566777766211                       


Q ss_pred             -----c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC----ChHHHHHHHHh-----------------------
Q 039869           60 -----G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA----SRDDLLELIAF-----------------------  106 (152)
Q Consensus        60 -----~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------------------  106 (152)
                           + ..++.++|+||+|+++|++++|..|+.+.......    ....+......                       
T Consensus       184 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (316)
T cd07842         184 PELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMK  263 (316)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhh
Confidence                 1 12356799999999999999999776554322100    00000000000                       


Q ss_pred             cCCCCCCC-----------CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          107 SSEVPEFP-----------SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       107 ~~~~~~~~-----------~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      .......+           ...+.++.+++.+||..||++||++.++++||||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         264 DFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            00000111           1566789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.94  E-value=2.1e-26  Score=161.43  Aligned_cols=132  Identities=17%  Similarity=0.251  Sum_probs=105.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++.++..++.|++.||+|||+++++|+||||+||+++..   ..++++||+...                        
T Consensus       120 ~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  196 (283)
T cd05090         120 SLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ---LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPE  196 (283)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC---CcEEeccccccccccCCcceecccCCCccceecChH
Confidence            47888999999999999999999999999999999999876   556777776331                        


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         +..++.++|+||||+++|++++ |..|+.+.      ....+...+.... ....+..++.++.+++..|++.+|++
T Consensus       197 ~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~  269 (283)
T cd05090         197 AIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF------SNQEVIEMVRKRQ-LLPCSEDCPPRMYSLMTECWQEGPSR  269 (283)
T ss_pred             HhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccCccc
Confidence               1224668999999999999998 77666553      4445555444333 34566788999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       270 Rp~~~~i~~~  279 (283)
T cd05090         270 RPRFKDIHTR  279 (283)
T ss_pred             CcCHHHHHHH
Confidence            9999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.94  E-value=6.2e-28  Score=169.16  Aligned_cols=143  Identities=24%  Similarity=0.290  Sum_probs=104.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC-----------------CchhHHHHHHH---------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK-----------------DAHEAEISAFL---------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~-----------------~~~~~~l~~~~---------   56 (152)
                      .+|+...++.++.|++.+++|||+.+++|.||||+|||+.++-                 ....+++.|||         
T Consensus       187 ~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h  266 (415)
T KOG0671|consen  187 IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH  266 (415)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc
Confidence            3688999999999999999999999999999999999983211                 12345667787         


Q ss_pred             -------------HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH--HHH-----------------
Q 039869           57 -------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL--ELI-----------------  104 (152)
Q Consensus        57 -------------~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------  104 (152)
                                   ...|-+++..+||||+||||+|+.+|...|+.-.     +.+.+.  +.+                 
T Consensus       267 s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-----n~EHLaMMerIlGp~P~~mi~r~~~~Ky  341 (415)
T KOG0671|consen  267 STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-----NLEHLAMMERILGPIPSRMIKKTRKEKY  341 (415)
T ss_pred             ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC-----cHHHHHHHHHhhCCCcHHHhhhhhhHhh
Confidence                         2345567899999999999999999997776543     111110  000                 


Q ss_pred             -HhcCC-------------C--CCCC--------CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          105 -AFSSE-------------V--PEFP--------SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       105 -~~~~~-------------~--~~~~--------~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       ..+..             .  +..|        .....++++||+++|.+||.+|+|+.|+|.||||..
T Consensus       342 f~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~  411 (415)
T KOG0671|consen  342 FRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFAR  411 (415)
T ss_pred             hhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhc
Confidence             00000             0  0000        112345899999999999999999999999999975

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=2.8e-26  Score=160.69  Aligned_cols=132  Identities=20%  Similarity=0.255  Sum_probs=103.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..+..++.|++.||+|||+.+++|+||||+||+++.+   ..++++|||..                        
T Consensus       104 ~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~p  180 (279)
T cd05111         104 DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD---SIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMAL  180 (279)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC---CcEEEcCCccceeccCCCcccccCCCCCcccccCH
Confidence            468899999999999999999999999999999999999877   55667776522                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||||+++||+++ |..|+.+.      ........+..+ ..+..+..++.++.+++.+|+..+|+
T Consensus       181 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c~~~~p~  253 (279)
T cd05111         181 ESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM------RPHEVPDLLEKG-ERLAQPQICTIDVYMVMVKCWMIDEN  253 (279)
T ss_pred             HHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHCC-CcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence               11224567899999999999998 88666554      334444444322 33344566788999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       254 ~Rps~~el~~  263 (279)
T cd05111         254 VRPTFKELAN  263 (279)
T ss_pred             cCcCHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.94  E-value=1.1e-26  Score=163.57  Aligned_cols=133  Identities=20%  Similarity=0.362  Sum_probs=104.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||+|||+.+++|+||||+||+++.+   +.++++||+..                        
T Consensus       127 ~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  203 (293)
T cd05053         127 ETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED---HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAP  203 (293)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC---CeEEeCccccccccccccceeccCCCCCCccccCH
Confidence            568899999999999999999999999999999999999877   56677777622                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+|||||++|++++ |..|+.+.      ...+....... ...+..+...+.++.+++.+|+..+|+
T Consensus       204 E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~  276 (293)
T cd05053         204 EALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI------PVEELFKLLKE-GYRMEKPQNCTQELYHLMRDCWHEVPS  276 (293)
T ss_pred             HHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC------CHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHcccCcc
Confidence               12223567899999999999997 77555443      33444444433 334456677889999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       277 ~Rps~~eil~~  287 (293)
T cd05053         277 QRPTFKQLVED  287 (293)
T ss_pred             cCcCHHHHHHH
Confidence            99999998853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.6e-27  Score=173.74  Aligned_cols=140  Identities=29%  Similarity=0.395  Sum_probs=120.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH---------HhhcCC----------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL---------QRHGLL----------   62 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~---------~~~~~~----------   62 (152)
                      ++|+.+.+|..|+.+.+.||+|||+.+.||||||..|||+..+   +.|+++|||         .+.|++          
T Consensus       120 kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~---g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILA  196 (948)
T KOG0577|consen  120 KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP---GLVKLADFGSASIMAPANSFVGTPYWMAPEVILA  196 (948)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC---CeeeeccccchhhcCchhcccCCccccchhHhee
Confidence            4789999999999999999999999999999999999999988   899999998         344555          


Q ss_pred             -----CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC-CCCChhHHHHHHHhhccccCCC
Q 039869           63 -----LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP-SNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        63 -----~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                           |+.++||||||+...|++-.++|.+..      +.......+... ..|.++ +.++..+++|+..||..-|+.|
T Consensus       197 MDEGqYdgkvDvWSLGITCIELAERkPPlFnM------NAMSALYHIAQN-esPtLqs~eWS~~F~~Fvd~CLqKipqeR  269 (948)
T KOG0577|consen  197 MDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQN-ESPTLQSNEWSDYFRNFVDSCLQKIPQER  269 (948)
T ss_pred             ccccccCCccceeeccchhhhhhhcCCCccCc------hHHHHHHHHHhc-CCCCCCCchhHHHHHHHHHHHHhhCcccC
Confidence                 378999999999999999999555554      777777777653 445444 5699999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      ||.+++|.|+|...+
T Consensus       270 ptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  270 PTSEELLKHRFVLRE  284 (948)
T ss_pred             CcHHHHhhcchhccC
Confidence            999999999998643

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.2e-27  Score=168.03  Aligned_cols=142  Identities=21%  Similarity=0.325  Sum_probs=115.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------H
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------Q   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~   57 (152)
                      +..|+++.+..|+.+|++||++||+.+||+||+||+|||+|..   +.+.|+|.|                        .
T Consensus       281 ~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~---GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEv  357 (591)
T KOG0986|consen  281 NPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDH---GHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEV  357 (591)
T ss_pred             CCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccC---CCeEeeccceEEecCCCCccccccCcccccCHHH
Confidence            3579999999999999999999999999999999999999998   677777776                        2


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..|+.+.|-||+||++|+|+.|+.||......  ....++.+.+.  .....++..+++++.++.+.+|..||++|.
T Consensus       358 l~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK--vk~eEvdrr~~--~~~~ey~~kFS~eakslc~~LL~Kdp~~RL  433 (591)
T KOG0986|consen  358 LQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK--VKREEVDRRTL--EDPEEYSDKFSEEAKSLCEGLLTKDPEKRL  433 (591)
T ss_pred             HcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh--hhHHHHHHHHh--cchhhcccccCHHHHHHHHHHHccCHHHhc
Confidence            23333788999999999999999999888654211  12334444432  334467788999999999999999999998


Q ss_pred             C-----HHHHhcCCCCCC
Q 039869          138 T-----AKHVLAHPFPSV  150 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~  150 (152)
                      .     +.++.+||||+.
T Consensus       434 Gcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  434 GCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             cCCCcCcchhhhCccccc
Confidence            4     558999999985

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.94  E-value=3.2e-26  Score=158.32  Aligned_cols=133  Identities=22%  Similarity=0.268  Sum_probs=105.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||++||+++++|+||+|+||+++.+   +.++++||+..                        
T Consensus        92 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~  168 (257)
T cd05040          92 GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASD---DKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCA  168 (257)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecC---CEEEeccccccccccccccceecccCCCCCceecC
Confidence            357899999999999999999999999999999999999877   56667776521                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||||+++|++++ |..|+...      ...+....+.........+...+..+.+++..|+..+|
T Consensus       169 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  242 (257)
T cd05040         169 PESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL------SGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNP  242 (257)
T ss_pred             HHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCc
Confidence                12234667999999999999998 88665433      44445444443344445566788999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       243 ~~Rps~~~~~~  253 (257)
T cd05040         243 ADRPTFAALRE  253 (257)
T ss_pred             ccCCCHHHHHH
Confidence            99999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.94  E-value=2.6e-26  Score=158.80  Aligned_cols=131  Identities=15%  Similarity=0.216  Sum_probs=104.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hcC
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HGL   61 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~~   61 (152)
                      .+++..+..++.|++.||++||++|++|+||||+||+++.+   +.++++||+..                      .+.
T Consensus        98 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~  174 (256)
T cd05082          98 VLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK  174 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCC---CcEEecCCccceeccccCCCCccceeecCHHHHccC
Confidence            47889999999999999999999999999999999999877   56677777621                      223


Q ss_pred             CCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHH
Q 039869           62 LLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK  140 (152)
Q Consensus        62 ~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~  140 (152)
                      .++.++|+||+||++|++++ |+.|+...      ....+...+.. ...+..+..++..+.+++.+|+..+|++||++.
T Consensus       175 ~~~~~~Dv~slG~i~~~l~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  247 (256)
T cd05082         175 KFSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDVVPRVEK-GYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFL  247 (256)
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            34668999999999999997 77555433      44444444433 234455677899999999999999999999999


Q ss_pred             HHhc
Q 039869          141 HVLA  144 (152)
Q Consensus       141 ~~l~  144 (152)
                      ++++
T Consensus       248 ~l~~  251 (256)
T cd05082         248 QLRE  251 (256)
T ss_pred             HHHH
Confidence            9864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.94  E-value=3.1e-26  Score=158.64  Aligned_cols=133  Identities=18%  Similarity=0.215  Sum_probs=103.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++.+++.++.|++.||+|||+.+++|+||||+||+++.+   +.++++||+.                         
T Consensus        95 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe  171 (256)
T cd05113          95 KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQ---GCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE  171 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC---CCEEECCCccceecCCCceeecCCCccChhhCCHH
Confidence            358899999999999999999999999999999999999876   4556666552                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||||+++|++++ |..|+...      ........+... .....+...+..+.+++.+||..+|++
T Consensus       172 ~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~  244 (256)
T cd05113         172 VLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERF------NNSETVEKVSQG-LRLYRPHLASEKVYAIMYSCWHEKAEE  244 (256)
T ss_pred             HHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcC------CHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCccc
Confidence             112334677999999999999998 77555332      333444444332 233445667899999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++.+
T Consensus       245 Rp~~~~ll~~  254 (256)
T cd05113         245 RPTFQQLLSS  254 (256)
T ss_pred             CCCHHHHHHh
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=8e-27  Score=161.19  Aligned_cols=149  Identities=26%  Similarity=0.390  Sum_probs=117.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------------   60 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~---------------------   60 (152)
                      ++.|++.++..+.++|+.||.|||.+||.|||+||+|||-........++|.||....|                     
T Consensus       170 ~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGS  249 (463)
T KOG0607|consen  170 RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGS  249 (463)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccc
Confidence            46799999999999999999999999999999999999997776777788888752222                     


Q ss_pred             ----------------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----CC-----hHHHHHHHHhcCCCC--CC
Q 039869           61 ----------------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----AS-----RDDLLELIAFSSEVP--EF  113 (152)
Q Consensus        61 ----------------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~--~~  113 (152)
                                      ..|+.+.|.||||+++|-|++|.+||.+.=..+.    ..     ...+.+-+.-+.+..  .-
T Consensus       250 AEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkd  329 (463)
T KOG0607|consen  250 AEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD  329 (463)
T ss_pred             hhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhh
Confidence                            2246789999999999999999988876433211    11     233344444343321  22


Q ss_pred             CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          114 PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       114 ~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      +..++.+..+++..+|..|+.+|.++.+++.|||++.
T Consensus       330 WahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~  366 (463)
T KOG0607|consen  330 WAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQR  366 (463)
T ss_pred             hHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence            3558999999999999999999999999999999985

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.94  E-value=5.3e-26  Score=156.87  Aligned_cols=136  Identities=30%  Similarity=0.412  Sum_probs=109.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hhh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QRH   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~~   59 (152)
                      ..+++..++.++.|++.||++||+.|++|+||+|+||+++.+   +.+++.||+                       ...
T Consensus        98 ~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~  174 (256)
T cd08530          98 KLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN---DLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWK  174 (256)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC---CcEEEeeccchhhhccCCcccccCCccccCHHHHC
Confidence            468899999999999999999999999999999999999876   445666654                       112


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      +..++.++|+||+|+++|++++|+.|+...      +..++...... ...+..+..++.++.+++..|+..+|++||++
T Consensus       175 ~~~~~~~~D~~slG~~~~~l~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  247 (256)
T cd08530         175 GRPYSYKSDIWSLGCLLYEMATFAPPFEAR------SMQDLRYKVQR-GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNC  247 (256)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHhc-CCCCCCchhhCHHHHHHHHHHcCCCcccCCCH
Confidence            334466899999999999999999666443      44444444433 33445566789999999999999999999999


Q ss_pred             HHHhcCCCC
Q 039869          140 KHVLAHPFP  148 (152)
Q Consensus       140 ~~~l~h~~~  148 (152)
                      .++++||++
T Consensus       248 ~~~l~~p~~  256 (256)
T cd08530         248 DKILASPAV  256 (256)
T ss_pred             HHHhcCCCC
Confidence            999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=5.2e-27  Score=177.87  Aligned_cols=136  Identities=22%  Similarity=0.299  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcC-------------------------
Q 039869            7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGL-------------------------   61 (152)
Q Consensus         7 ~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~-------------------------   61 (152)
                      +..+..++.|++.||+|||+.+|+||||||+|||++..  .+.++++|||.....                         
T Consensus       254 ~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~--~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~  331 (566)
T PLN03225        254 NKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEG--SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIM  331 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCC--CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhc
Confidence            45678899999999999999999999999999999752  146778888743210                         


Q ss_pred             -----------------------CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh------------
Q 039869           62 -----------------------LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF------------  106 (152)
Q Consensus        62 -----------------------~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  106 (152)
                                             .+..++||||+||++||++++..+...       ....+...+..            
T Consensus       332 ~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~  404 (566)
T PLN03225        332 STQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS-------NLIQFNRQLKRNDYDLVAWRKLV  404 (566)
T ss_pred             cCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch-------HHHHHHHHHHhcCCcHHHHHHhh
Confidence                                   012245999999999999986533211       11111111110            


Q ss_pred             -cCCCCC------CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          107 -SSEVPE------FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       107 -~~~~~~------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                       ....++      ..........+|+.+||..||++|||+.++++||||++.
T Consensus       405 ~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~  456 (566)
T PLN03225        405 EPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDRE  456 (566)
T ss_pred             ccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence             000000      011123345689999999999999999999999999864

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=8.3e-27  Score=161.89  Aligned_cols=133  Identities=17%  Similarity=0.289  Sum_probs=103.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ...+++.++..++.|++.||+|||+++++|++|+++||+++.+   ..+++++|+..                       
T Consensus        97 ~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~---~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~a  173 (259)
T PF07714_consen   97 KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSN---GQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLA  173 (259)
T ss_dssp             TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETT---TEEEEESTTTGEETTTSSSEEESTTSESGGGGS-
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence            4578999999999999999999999999999999999999987   56666766522                       


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++||||||+++||+++ ++.|+...      ....+...+.. ......+..++..+.+++..||..+|
T Consensus       174 PE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~C~~~~p  246 (259)
T PF07714_consen  174 PEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY------DNEEIIEKLKQ-GQRLPIPDNCPKDIYSLIQQCWSHDP  246 (259)
T ss_dssp             HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS------CHHHHHHHHHT-TEETTSBTTSBHHHHHHHHHHT-SSG
T ss_pred             cccccccccccccccccccccccccccccccccccc------ccccccccccc-cccceeccchhHHHHHHHHHHcCCCh
Confidence                22224678999999999999999 55444332      56666666643 33455677899999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       247 ~~RPs~~~i~~  257 (259)
T PF07714_consen  247 EKRPSFQEILQ  257 (259)
T ss_dssp             GGS--HHHHHH
T ss_pred             hhCcCHHHHHh
Confidence            99999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.94  E-value=2.6e-27  Score=173.82  Aligned_cols=136  Identities=22%  Similarity=0.316  Sum_probs=110.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +++++......+..+|+.|+.|||.++|||||||+-||||..+   -.++|.|||+                        
T Consensus       206 ~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~---d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEv  282 (904)
T KOG4721|consen  206 GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD---DVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEV  282 (904)
T ss_pred             cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc---ceEEeccccchHhhhhhhhhhhhhhhHhhhCHHH
Confidence            5678888999999999999999999999999999999999887   6778888872                        


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ....+.+.++|||||||+||||+||..|+-+-      +...+.--+.......+.|..+++.+.-|++.||+.+|..||
T Consensus       283 IrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV------dssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRP  356 (904)
T KOG4721|consen  283 IRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV------DSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRP  356 (904)
T ss_pred             hhcCCcccccceehhHHHHHHHHhcCCCcccc------chheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCc
Confidence            24455689999999999999999999776443      222222222222234467888999999999999999999999


Q ss_pred             CHHHHhcCC
Q 039869          138 TAKHVLAHP  146 (152)
Q Consensus       138 ~~~~~l~h~  146 (152)
                      ++.+++.|=
T Consensus       357 SFrqil~Hl  365 (904)
T KOG4721|consen  357 SFRQILLHL  365 (904)
T ss_pred             cHHHHHHHH
Confidence            999999873

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.94  E-value=3.2e-26  Score=161.07  Aligned_cols=132  Identities=23%  Similarity=0.343  Sum_probs=104.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..+..++.|++.||.|||+++++||||||+||+++.+   ..++++||+...                       
T Consensus       122 ~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ap  198 (290)
T cd05045         122 RALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG---RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAI  198 (290)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCC---CcEEeccccccccccCccchhcccCCCCCccccCH
Confidence            357899999999999999999999999999999999999876   556677766321                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++|+||||+++|++++ |..|+.+.      ....+....... ...+.+..++.++.+++..||+.+|+
T Consensus       199 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~P~  271 (290)
T cd05045         199 ESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI------APERLFNLLKTG-YRMERPENCSEEMYNLMLTCWKQEPD  271 (290)
T ss_pred             HHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHccCCcc
Confidence                1223567899999999999998 77555433      444555444432 33445677899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       272 ~Rp~~~~i~~  281 (290)
T cd05045         272 KRPTFADISK  281 (290)
T ss_pred             cCCCHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.94  E-value=3.4e-26  Score=158.81  Aligned_cols=134  Identities=25%  Similarity=0.376  Sum_probs=102.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++.+++.++.|++.||++||+.|++|+||+|+||+++.+   +.+++.+|+.                         
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~  177 (267)
T cd08224         101 RLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER  177 (267)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCC---CcEEEeccceeeeccCCCcccceecCCccccCHHH
Confidence            457899999999999999999999999999999999999876   4455556541                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCC-CCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS-NISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+..++.++|+||+|+++|++++|+.|+.....    +..........+.. ++.+. .++.++.+++.+||..+|++|
T Consensus       178 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~cl~~~p~~R  252 (267)
T cd08224         178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEKCDY-PPLPADHYSEELRDLVSRCINPDPEKR  252 (267)
T ss_pred             hccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHHHHhhhhcCCC-CCCChhhcCHHHHHHHHHHcCCCcccC
Confidence            2233346679999999999999999977754421    33333333333222 23333 688899999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       253 p~~~~il~  260 (267)
T cd08224         253 PDISYVLQ  260 (267)
T ss_pred             CCHHHHHH
Confidence            99998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.94  E-value=3.6e-26  Score=158.45  Aligned_cols=132  Identities=17%  Similarity=0.251  Sum_probs=104.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||++||++|++|+||||+||+++.+   ..++++|||..                        
T Consensus        90 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  166 (257)
T cd05115          90 DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQ---HYAKISDFGLSKALGADDSYYKARSAGKWPLKWYA  166 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCC---CcEEeccCCccccccCCccceeccCCCCCCcccCC
Confidence            468999999999999999999999999999999999999876   45556665521                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||||+++|++++ |..|+...      ...++...+..+. .+..+...++++.+++.+||..+|
T Consensus       167 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~c~~~~~  239 (257)
T cd05115         167 PECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM------KGPEVMSFIEQGK-RLDCPAECPPEMYALMKDCWIYKW  239 (257)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC------CHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHcCCCh
Confidence                12234568999999999999996 77665544      4445555554433 345677889999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++.+
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05115         240 EDRPNFAKVEE  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998763

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=2.9e-26  Score=159.84  Aligned_cols=131  Identities=20%  Similarity=0.329  Sum_probs=102.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      .+++.++..++.|++.||+|||++|++|+||||+||+++.+   ..++++||+..                        .
T Consensus       108 ~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~  184 (270)
T cd05047         108 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN  184 (270)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC---CeEEECCCCCccccchhhhccCCCCccccCChHHHc
Confidence            47899999999999999999999999999999999999876   45566666522                        1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           60 GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      +..++.++|+||||+++|++++ |..||.+.      +.......... ....+.+..++.++.+++.+|+..+|.+||+
T Consensus       185 ~~~~~~~~Di~slG~il~el~~~g~~pf~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  257 (270)
T cd05047         185 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM------TCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPS  257 (270)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCcccc------CHHHHHHHHhC-CCCCCCCCcCCHHHHHHHHHHcccChhhCCC
Confidence            2234568999999999999997 77666543      33444444432 2233456678899999999999999999999


Q ss_pred             HHHHhc
Q 039869          139 AKHVLA  144 (152)
Q Consensus       139 ~~~~l~  144 (152)
                      +.+++.
T Consensus       258 ~~~il~  263 (270)
T cd05047         258 FAQILV  263 (270)
T ss_pred             HHHHHH
Confidence            999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=2.9e-26  Score=163.22  Aligned_cols=132  Identities=17%  Similarity=0.270  Sum_probs=103.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.||+.||+|||+.+++||||||+||+++.+   ..++++|||...                        
T Consensus       105 ~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE  181 (316)
T cd05108         105 NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALE  181 (316)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCC---CcEEEccccccccccCCCcceeccCCccceeecChH
Confidence            47788999999999999999999999999999999999877   566777776221                        


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         +..++.++|+||||+++|++++ |..|+.+.      ....+...... ......+..++.++.+++.+||..+|++
T Consensus       182 ~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~  254 (316)
T cd05108         182 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI------PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADS  254 (316)
T ss_pred             HhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHhC-CCCCCCCCCCCHHHHHHHHHHccCChhh
Confidence               1223567899999999999997 77555443      33444443332 2333455678899999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++.+
T Consensus       255 Rps~~~l~~~  264 (316)
T cd05108         255 RPKFRELIIE  264 (316)
T ss_pred             CcCHHHHHHH
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=3.7e-26  Score=160.01  Aligned_cols=138  Identities=28%  Similarity=0.385  Sum_probs=101.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.++..++.|++.+|.|||++|++|+||+|+||+++.+   +.++++||+..                        
T Consensus        94 ~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~  170 (283)
T cd07830          94 KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP---EVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEIL  170 (283)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC---CCEEEeecccceeccCCCCcCCCCCcccccCceee
Confidence            367899999999999999999999999999999999999887   55566666411                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-------------------C--------C
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-------------------E--------V  110 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~--------~  110 (152)
                       .+..++.++|+||+|++++++++|+.|+....     .............                   .        .
T Consensus       171 ~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (283)
T cd07830         171 LRSTSYSSPVDIWALGCIMAELYTLRPLFPGSS-----EIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSL  245 (283)
T ss_pred             ecCcCcCCccchhhHHHHHHHHHhCCCccCCCC-----hHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccH
Confidence             11223567999999999999999996665442     1111111100000                   0        0


Q ss_pred             CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                      .......+.++.+++.+||..+|++||++.+++.||||
T Consensus       246 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         246 HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            01112236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=2.8e-26  Score=160.73  Aligned_cols=131  Identities=21%  Similarity=0.254  Sum_probs=102.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      .+++..++.++.|++.||+|||++|++|+||||+||+++..   ..++++||+.                          
T Consensus       118 ~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (280)
T cd05092         118 QLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG---LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE  194 (280)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC---CCEEECCCCceeEcCCCceeecCCCccccccccCHH
Confidence            57899999999999999999999999999999999999866   4556666552                          


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+|||||++|++++ |..|+...      ...+.......+. ....+..++.++.+++.+||..||++
T Consensus       195 ~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~  267 (280)
T cd05092         195 SILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQL------SNTEAIECITQGR-ELERPRTCPPEVYAIMQGCWQREPQQ  267 (280)
T ss_pred             HhccCCcCchhhHHHHHHHHHHHHcCCCCCCccC------CHHHHHHHHHcCc-cCCCCCCCCHHHHHHHHHHccCChhh
Confidence             122334677999999999999998 77555433      3344444443332 33456778999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.+++.
T Consensus       268 Rp~~~~l~~  276 (280)
T cd05092         268 RMVIKDIHS  276 (280)
T ss_pred             CCCHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=1.9e-26  Score=161.33  Aligned_cols=138  Identities=28%  Similarity=0.398  Sum_probs=108.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.++.+||+.+++|+||+|+||+++.+   +.+++.||+..                        
T Consensus        96 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~  172 (277)
T cd06641          96 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV  172 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC---CCEEEeecccceecccchhhhccccCCccccChhh
Confidence            457899999999999999999999999999999999999876   44555555411                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+...+.++|+||+||++|++++|..|+...      ........+. ....+..+..++.++.+++.+|+..+|++||
T Consensus       173 ~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  245 (277)
T cd06641         173 IKQSAYDSKADIWSLGITAIELAKGEPPHSEL------HPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRP  245 (277)
T ss_pred             hccCCCCchhhHHHHHHHHHHHHcCCCCCCcc------chHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHccCChhhCc
Confidence             1223356799999999999999999666433      2223333222 2334456677889999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.+++.||||.+
T Consensus       246 ~~~~~l~~~~~~~  258 (277)
T cd06641         246 TAKELLKHKFIVR  258 (277)
T ss_pred             CHHHHHhCHHHhh
Confidence            9999999999964

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=5e-26  Score=157.47  Aligned_cols=132  Identities=17%  Similarity=0.257  Sum_probs=103.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +.+++..++.++.|++.||++||..+++|+||||+||+++.+   +.++++||+.                         
T Consensus        90 ~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~---~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~a  166 (257)
T cd05060          90 REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNR---HQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYA  166 (257)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCC---CcEEeccccccceeecCCcccccccCccccccccC
Confidence            458899999999999999999999999999999999999877   4556666641                         


Q ss_pred             ---hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           58 ---RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        58 ---~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                         ..+..++.++|+||||+++|++++ |..|+...      +..++...+.... ....+..++..+.+++.+||..+|
T Consensus       167 PE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p  239 (257)
T cd05060         167 PECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM------KGAEVIAMLESGE-RLPRPEECPQEIYSIMLSCWKYRP  239 (257)
T ss_pred             HHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC------CHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHhcCCh
Confidence               112224567999999999999998 77554333      4444444444332 345567788999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       240 ~~Rp~~~~l~~  250 (257)
T cd05060         240 EDRPTFSELES  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=3.7e-26  Score=159.73  Aligned_cols=138  Identities=27%  Similarity=0.392  Sum_probs=101.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||++||+.|++|+||+|+||+++.+   +.+++++++..                        
T Consensus        93 ~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~  169 (282)
T cd07829          93 GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD---GVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEI  169 (282)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC---CCEEEecCCcccccCCCccccCccccCcCcCChHH
Confidence            368899999999999999999999999999999999999876   45566665521                        


Q ss_pred             -h-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh------------------cCCCC-------
Q 039869           59 -H-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF------------------SSEVP-------  111 (152)
Q Consensus        59 -~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-------  111 (152)
                       . +..++.++|+||+|+++|++++|..|+.+..     ....+......                  ....+       
T Consensus       170 ~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (282)
T cd07829         170 LLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS-----EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDL  244 (282)
T ss_pred             hcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccch
Confidence             1 1134667999999999999999986664432     11111111000                  00000       


Q ss_pred             -CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 -EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 -~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                       ......+..+.+++..||..+|++||++.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         245 EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence             0112347789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=1.6e-26  Score=181.28  Aligned_cols=141  Identities=18%  Similarity=0.182  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC-------CCccCCCCCCCeeeecCC--------------CchhHHHHHHHHhh--
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH-------GLVHCDIQGDNTLLVAGK--------------DAHEAEISAFLQRH--   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~-------~i~h~dlk~~Nil~~~~~--------------~~~~~~l~~~~~~~--   59 (152)
                      +++++..++.|+.||+.||+|||..       +|+|+||||+|||++...              ....++|+|||...  
T Consensus       113 g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l  192 (1021)
T PTZ00266        113 GKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNI  192 (1021)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccc
Confidence            4689999999999999999999984       499999999999996421              11236777876211  


Q ss_pred             ------------------------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCC
Q 039869           60 ------------------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS  115 (152)
Q Consensus        60 ------------------------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (152)
                                              ...++.++|||||||++|+|++|..||....     ....+...+.....  ....
T Consensus       193 ~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-----~~~qli~~lk~~p~--lpi~  265 (1021)
T PTZ00266        193 GIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-----NFSQLISELKRGPD--LPIK  265 (1021)
T ss_pred             cccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-----cHHHHHHHHhcCCC--CCcC
Confidence                                    1224568999999999999999997775432     33333333332221  1124


Q ss_pred             CCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          116 NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       116 ~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ..+.++.+||..||..+|.+||++.++|.|+|++.
T Consensus       266 ~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        266 GKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN  300 (1021)
T ss_pred             CCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence            57889999999999999999999999999999963

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.94  E-value=2.9e-26  Score=162.62  Aligned_cols=131  Identities=20%  Similarity=0.320  Sum_probs=102.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .++..+++.++.|++.||+|||++|++|+||||+||+++.+   ..++++||+..                         
T Consensus       136 ~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~---~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE  212 (307)
T cd05098         136 QLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE  212 (307)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC---CcEEECCCcccccccccchhhccccCCCccceeChH
Confidence            47889999999999999999999999999999999999876   44556665521                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+||++|++++ |..|+.+.      ...++...... ....+.+..++.++.+++.+||..+|++
T Consensus       213 ~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~  285 (307)
T cd05098         213 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------PVEELFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQ  285 (307)
T ss_pred             HhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC------CHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcccChhh
Confidence              12224567999999999999998 66555433      44444444433 3344566778999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       286 Rps~~evl~  294 (307)
T cd05098         286 RPTFKQLVE  294 (307)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.94  E-value=6.4e-26  Score=157.12  Aligned_cols=132  Identities=15%  Similarity=0.241  Sum_probs=103.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.++..++.|++.||+|||++|++|+||+|+||+++.+   ..++++||+..                        
T Consensus        99 ~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~  175 (261)
T cd05148          99 QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGED---LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEA  175 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCC---ceEEEccccchhhcCCccccccCCCCceEecCHHH
Confidence            458899999999999999999999999999999999999877   45566666522                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||||+++|++++ |+.|+.+.      ...+....+.. ......+..+++++.+++.+||..+|++|
T Consensus       176 ~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  248 (261)
T cd05148         176 ASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM------NNHEVYDQITA-GYRMPCPAKCPQEIYKIMLECWAAEPEDR  248 (261)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC------CHHHHHHHHHh-CCcCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence             12234567999999999999998 67555443      34444444442 33445567889999999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       249 pt~~~l~~  256 (261)
T cd05148         249 PSFKALRE  256 (261)
T ss_pred             cCHHHHHH
Confidence            99998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-27  Score=187.12  Aligned_cols=137  Identities=33%  Similarity=0.536  Sum_probs=114.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------cCC----
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------GLL----   62 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------~~~----   62 (152)
                      ..++...+.|..|++.|++|||+.|||||||||+||+++.+   +.+|++|||...                 |++    
T Consensus      1330 i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~---g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMA 1406 (1509)
T KOG4645|consen 1330 IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN---GLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMA 1406 (1509)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC---CcEEeecccceeEecCchhcCCHHHHhhcCCchhcC
Confidence            35678889999999999999999999999999999999999   789999998221                 111    


Q ss_pred             -----------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           63 -----------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        63 -----------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                                 ...+.||||+||+..||+||+.| |..+.    +.-.+..++..+. .|++|..++.+.++||..||..
T Consensus      1407 PEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrP-W~~~d----ne~aIMy~V~~gh-~Pq~P~~ls~~g~dFle~Cl~~ 1480 (1509)
T KOG4645|consen 1407 PEVITGTKGKGHGGAADIWSLGCVVLEMATGKRP-WAELD----NEWAIMYHVAAGH-KPQIPERLSSEGRDFLEHCLEQ 1480 (1509)
T ss_pred             chhhcccccCCCCcchhhhcccceEEEeecCCCc-hhhcc----chhHHHhHHhccC-CCCCchhhhHhHHHHHHHHHhc
Confidence                       14578999999999999999954 44432    4446666776555 5778888999999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~  149 (152)
                      ||++||++.|+++|.|=.
T Consensus      1481 dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1481 DPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             CchhhhHHHHHHHhhccc
Confidence            999999999999998754

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.94  E-value=2.5e-26  Score=160.85  Aligned_cols=138  Identities=25%  Similarity=0.370  Sum_probs=102.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++.+++.++.|++.||++||..|++|+||+|+||+++.+   +.++++||+...                       
T Consensus        95 ~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE  171 (287)
T cd07840          95 VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINND---GVLKLADFGLARPYTKRNSADYTNRVITLWYRPPE  171 (287)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCC---CCEEEccccceeeccCCCcccccccccccccCCce
Confidence            468999999999999999999999999999999999999887   556666665110                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--------------------C----
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--------------------P----  111 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~----  111 (152)
                          ...++.++|+||||+++|++++|+.|+....     ...............                    .    
T Consensus       172 ~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07840         172 LLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST-----ELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKR  246 (287)
T ss_pred             eeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCchhhccccccchhhhhccccccchh
Confidence                1223567999999999999999997765432     111111111100000                    0    


Q ss_pred             ----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCC
Q 039869          112 ----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       112 ----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~  148 (152)
                          .+...++.++.+++.+||..+|++||++.++++||||
T Consensus       247 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         247 RLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                0111238889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.94  E-value=4.7e-26  Score=161.33  Aligned_cols=132  Identities=18%  Similarity=0.280  Sum_probs=101.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++.++..++.|++.||+|||+++++|+||||+||+++.+   ..++++||+..                         
T Consensus       137 ~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  213 (302)
T cd05055         137 FLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHG---KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPE  213 (302)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCC---CeEEECCCcccccccCCCceeecCCCCcccccCCHh
Confidence            37899999999999999999999999999999999999866   45566666521                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+..     ....+...... ......+...+.++.+++.+||+.+|++
T Consensus       214 ~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~  287 (302)
T cd05055         214 SIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMP-----VDSKFYKLIKE-GYRMAQPEHAPAEIYDIMKTCWDADPLK  287 (302)
T ss_pred             hhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCC-----chHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHcCCCchh
Confidence              12223567899999999999998 776655442     22333333332 2233445667899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       288 Rpt~~ell~  296 (302)
T cd05055         288 RPTFKQIVQ  296 (302)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.94  E-value=3.4e-26  Score=159.68  Aligned_cols=135  Identities=28%  Similarity=0.388  Sum_probs=106.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||++||+.|++|+||+|+||+++.+   +.+++.||+..                        
T Consensus        97 ~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (280)
T cd05581          97 GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKD---MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIE  173 (280)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC---CCEEecCCccccccCCccccccCCCCCcccccccc
Confidence            368999999999999999999999999999999999999876   44555555421                        


Q ss_pred             ---------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCC
Q 039869           59 ---------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI  117 (152)
Q Consensus        59 ---------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (152)
                                           .+...+.++|+||+|++++++++|..|+...      ..........  .....++..+
T Consensus       174 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~--~~~~~~~~~~  245 (280)
T cd05581         174 KNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS------NEYLTFQKIL--KLEYSFPPNF  245 (280)
T ss_pred             ccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHH--hcCCCCCCcc
Confidence                                 1122356799999999999999999666544      2222222222  2233456778


Q ss_pred             ChhHHHHHHHhhccccCCCcCH----HHHhcCCCC
Q 039869          118 SEDGRDFLSKCFIRVHQLRWTA----KHVLAHPFP  148 (152)
Q Consensus       118 ~~~~~~ll~~~l~~~p~~R~~~----~~~l~h~~~  148 (152)
                      ++.+.+++..||..+|++||++    ++++.||||
T Consensus       246 ~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         246 PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            9999999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.94  E-value=5.3e-26  Score=161.00  Aligned_cols=132  Identities=18%  Similarity=0.314  Sum_probs=103.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..++..++..++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       132 ~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~---~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aP  208 (304)
T cd05101         132 EQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAP  208 (304)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC---CcEEECCCccceecccccccccccCCCCCceeeCc
Confidence            357788899999999999999999999999999999999876   45566666521                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||||+++|++++ |..|+.+.      ...++...+... .....+..++.++.+++.+||..+|+
T Consensus       209 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~  281 (304)
T cd05101         209 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------PVEELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAIPS  281 (304)
T ss_pred             hhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC------CHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccChh
Confidence               12234668999999999999998 56555443      445555544432 33445677899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       282 ~Rps~~e~l~  291 (304)
T cd05101         282 HRPTFKQLVE  291 (304)
T ss_pred             hCCCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.94  E-value=3.2e-26  Score=158.19  Aligned_cols=133  Identities=24%  Similarity=0.374  Sum_probs=104.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||.+||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus        95 ~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~  171 (255)
T cd08219          95 KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQN---GKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEI  171 (255)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCC---CcEEEcccCcceeecccccccccccCCccccCHHH
Confidence            457899999999999999999999999999999999999876   44556666521                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+|+++|++++|..||...      +.......+.... ....+..++..+.+++.+||+.+|++||
T Consensus       172 ~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rp  244 (255)
T cd08219         172 WENMPYNNKSDIWSLGCILYELCTLKHPFQAN------SWKNLILKVCQGS-YKPLPSHYSYELRSLIKQMFKRNPRSRP  244 (255)
T ss_pred             HccCCcCchhhhhhhchhheehhhccCCCCCC------CHHHHHHHHhcCC-CCCCCcccCHHHHHHHHHHHhCCcccCC
Confidence             1223466899999999999999999776543      4444444443332 3345677889999999999999999999


Q ss_pred             CHHHHhcC
Q 039869          138 TAKHVLAH  145 (152)
Q Consensus       138 ~~~~~l~h  145 (152)
                      ++.+++.-
T Consensus       245 ~~~~il~~  252 (255)
T cd08219         245 SATTILSR  252 (255)
T ss_pred             CHHHHhhc
Confidence            99999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=6.8e-26  Score=157.05  Aligned_cols=132  Identities=14%  Similarity=0.252  Sum_probs=101.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.|++.||+|||+.+++|+||||+||+++.+   ..++++|||...                        
T Consensus        94 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~a  170 (262)
T cd05058          94 NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES---FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMA  170 (262)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC---CcEEECCccccccccCCcceeecccccCcCCccccC
Confidence            35677889999999999999999999999999999999876   455666665321                        


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                           +..++.++|+||||+++|+++++..|++...     +.......+... ..+..+..++..+.+++..||..+|+
T Consensus       171 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~  244 (262)
T cd05058         171 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----DSFDITVYLLQG-RRLLQPEYCPDPLYEVMLSCWHPKPE  244 (262)
T ss_pred             hhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHcCCChh
Confidence                 2233567999999999999999654554432     444444444332 23344566788999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       245 ~Rp~~~~il~  254 (262)
T cd05058         245 MRPTFSELVS  254 (262)
T ss_pred             hCCCHHHHHH
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.94  E-value=7.5e-26  Score=156.86  Aligned_cols=131  Identities=17%  Similarity=0.257  Sum_probs=102.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus        97 ~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  173 (260)
T cd05070          97 RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDG---LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPE  173 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCC---ceEEeCCceeeeeccCcccccccCCCCCccccChH
Confidence            357899999999999999999999999999999999999876   45556665521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||||+++|++++ |..|+.+.      +..+....... ...++.+...+..+.+++.+|+..+|++
T Consensus       174 ~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~  246 (260)
T cd05070         174 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM------NNREVLEQVER-GYRMPCPQDCPISLHELMLQCWKKDPEE  246 (260)
T ss_pred             HHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHc-CCCCCCCCcCCHHHHHHHHHHcccCccc
Confidence              12223568999999999999999 67555443      33444444432 2334456778899999999999999999


Q ss_pred             CcCHHHHh
Q 039869          136 RWTAKHVL  143 (152)
Q Consensus       136 R~~~~~~l  143 (152)
                      ||++.++.
T Consensus       247 Rpt~~~l~  254 (260)
T cd05070         247 RPTFEYLQ  254 (260)
T ss_pred             CcCHHHHH
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.94  E-value=5.8e-26  Score=157.15  Aligned_cols=133  Identities=16%  Similarity=0.222  Sum_probs=103.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||+|||+.+++|+||||+||+++.+   +.++++||+..                        
T Consensus        95 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe  171 (256)
T cd05059          95 GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGED---NVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPE  171 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCC---CcEEECCcccceecccccccccCCCCCCccccCHH
Confidence            357899999999999999999999999999999999999877   45666666521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+...      ...+....+.. ......+..++.++.+++.+||..+|++
T Consensus       172 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~  244 (256)
T cd05059         172 VFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF------SNSEVVESVSA-GYRLYRPKLAPTEVYTIMYSCWHEKPED  244 (256)
T ss_pred             HhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC------CHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHhcCChhh
Confidence              12334567999999999999999 56555433      33444444432 2233455678999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.++++.
T Consensus       245 Rpt~~~~l~~  254 (256)
T cd05059         245 RPAFKKLLSQ  254 (256)
T ss_pred             CcCHHHHHHH
Confidence            9999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=3.9e-26  Score=160.25  Aligned_cols=144  Identities=24%  Similarity=0.338  Sum_probs=106.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------~   58 (152)
                      +++++..+..++.|++.+|.|||+ .+++|+||+|+||+++.+   +.+++++|+.                       .
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~---~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~  174 (284)
T cd06620          98 GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSR---GQIKLCDFGVSGELINSIADTFVGTSTYMSPERI  174 (284)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCC---CcEEEccCCcccchhhhccCccccCcccCCHHHH
Confidence            468899999999999999999996 689999999999999876   4455555541                       1


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC--Ch---HHHHHHHHhcCCCCCCCCC-CChhHHHHHHHhhccc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA--SR---DDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~l~~~  132 (152)
                      .+..++.++|+||+||++|++++|+.|+.........  ..   ......... ...+.++.. ++.++.+++.+|++.|
T Consensus       175 ~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~d  253 (284)
T cd06620         175 QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-EPPPRLPSSDFPEDLRDFVDACLLKD  253 (284)
T ss_pred             ccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-ccCCCCCchhcCHHHHHHHHHHhcCC
Confidence            1233467899999999999999999777654321100  01   122222221 122233333 7788999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~  150 (152)
                      |++||++.++++|+||.+
T Consensus       254 p~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         254 PTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             cccCcCHHHHhcCccccc
Confidence            999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.94  E-value=6.4e-26  Score=161.34  Aligned_cols=132  Identities=20%  Similarity=0.317  Sum_probs=103.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..++..++..++.|++.||.|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       129 ~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  205 (314)
T cd05099         129 EQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED---NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAP  205 (314)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC---CcEEEccccccccccccccccccccCCCCccccCH
Confidence            457889999999999999999999999999999999999876   45667776622                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++|++++ |..|+.+.      ....+....... .....+..++.++.+++.+||..+|+
T Consensus       206 E~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~  278 (314)
T cd05099         206 EALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI------PVEELFKLLREG-HRMDKPSNCTHELYMLMRECWHAVPT  278 (314)
T ss_pred             HHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence               12224567999999999999999 66555443      444555444432 33455677889999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       279 ~Rps~~~ll~  288 (314)
T cd05099         279 QRPTFKQLVE  288 (314)
T ss_pred             cCcCHHHHHH
Confidence            9999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.94  E-value=3.1e-26  Score=164.38  Aligned_cols=139  Identities=24%  Similarity=0.339  Sum_probs=103.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..++.++.|++.||+|||++|++|+||+|+||+++.+   +.++++|||...                        
T Consensus       103 ~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~  179 (337)
T cd07852         103 ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSD---CRVKLADFGLARSLSELEENPENPVLTDYVATRWYR  179 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC---CcEEEeeccchhccccccccccCcchhccccccccc
Confidence            57888999999999999999999999999999999999877   455666655111                        


Q ss_pred             -------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--------------------------
Q 039869           60 -------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--------------------------  106 (152)
Q Consensus        60 -------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------  106 (152)
                             +...+.++|+||+|+++|++++|+.|+.+..     ...........                          
T Consensus       180 aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (337)
T cd07852         180 APEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS-----TLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPS  254 (337)
T ss_pred             CceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccc
Confidence                   1123567999999999999999997775432     11111110000                          


Q ss_pred             cC--CCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          107 SS--EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       107 ~~--~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ..  ........++.++.+++.+||+.+|++||++.+++.|||+++
T Consensus       255 ~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         255 RPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             ccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence            00  001122337889999999999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=1e-26  Score=176.40  Aligned_cols=128  Identities=21%  Similarity=0.175  Sum_probs=105.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      .|++.+++.|+.|++.||++||...  |||||||-||||++.+   +..+|.|||                         
T Consensus       140 ~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~---g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~  216 (738)
T KOG1989|consen  140 RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD---GNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKY  216 (738)
T ss_pred             cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC---CCEEeCcccccccccCCCccHHHHHHHHHHHHhh
Confidence            4999999999999999999999987  9999999999999988   677888887                         


Q ss_pred             ------------HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHH
Q 039869           57 ------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        57 ------------~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (152)
                                  ...|.+.+.|+|||+|||+||-|+....||...-.      -    .+..+.+..+-...++..+.+|
T Consensus       217 TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------l----aIlng~Y~~P~~p~ys~~l~~L  286 (738)
T KOG1989|consen  217 TTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------L----AILNGNYSFPPFPNYSDRLKDL  286 (738)
T ss_pred             CCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc------e----eEEeccccCCCCccHHHHHHHH
Confidence                        34555568899999999999999999988865411      0    1112233333335789999999


Q ss_pred             HHHhhccccCCCcCHHHHhc
Q 039869          125 LSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~  144 (152)
                      |+.||..+|++||++-|++.
T Consensus       287 I~~mL~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  287 IRTMLQPNPDERPNIYQVLE  306 (738)
T ss_pred             HHHHhccCcccCCCHHHHHH
Confidence            99999999999999998874

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.94  E-value=6.9e-26  Score=157.09  Aligned_cols=131  Identities=18%  Similarity=0.241  Sum_probs=101.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.|++.||+|||+.|++|+||+|+||+++.+   ..++++||+...                        
T Consensus        98 ~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~  174 (260)
T cd05069          98 YLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDN---LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA  174 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC---CeEEECCCccceEccCCcccccCCCccchhhCCHHH
Confidence            47889999999999999999999999999999999999877   455666665221                        


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        +...+.++|+||+|+++|++++ |..|+.+.      ...+....... ...+..+...+..+.+++.+||..+|++|
T Consensus       175 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05069         175 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM------VNREVLEQVER-GYRMPCPQGCPESLHELMKLCWKKDPDER  247 (260)
T ss_pred             hccCCcChHHHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHc-CCCCCCCcccCHHHHHHHHHHccCCcccC
Confidence              1223567999999999999999 77555543      33334444332 22334566788999999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       248 p~~~~i~~  255 (260)
T cd05069         248 PTFEYIQS  255 (260)
T ss_pred             cCHHHHHH
Confidence            99998764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.94  E-value=6.6e-26  Score=156.39  Aligned_cols=132  Identities=17%  Similarity=0.185  Sum_probs=101.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.|++.||+|||+++++|+||||+||+++.+   +.++++||+...                       
T Consensus        89 ~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  165 (252)
T cd05084          89 PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEK---NVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAP  165 (252)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCC---CcEEECccccCcccccccccccCCCCCCceeecCc
Confidence            458899999999999999999999999999999999999876   456777775321                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++|+||+|+++|++++ |..|+...      ........... ......+..++..+.+++.+||..+|+
T Consensus       166 E~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~  238 (252)
T cd05084         166 EALNYGRYSSESDVWSFGILLWEAFSLGAVPYANL------SNQQTREAIEQ-GVRLPCPELCPDAVYRLMERCWEYDPG  238 (252)
T ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc------CHHHHHHHHHc-CCCCCCcccCCHHHHHHHHHHcCCChh
Confidence                1223557899999999999998 66444332      33333333332 223345667889999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       239 ~Rps~~~~~~  248 (252)
T cd05084         239 QRPSFSTVHQ  248 (252)
T ss_pred             hCcCHHHHHH
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=3e-26  Score=159.25  Aligned_cols=134  Identities=15%  Similarity=0.126  Sum_probs=95.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCc----hhHHHHHHHHh--------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA----HEAEISAFLQR--------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~----~~~~l~~~~~~--------------------   58 (152)
                      .++++..+..++.|++.||+|||+++++||||||+||+++.++..    ..+++.+|+..                    
T Consensus       100 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~  179 (262)
T cd05077         100 DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPEC  179 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhh
Confidence            468999999999999999999999999999999999999754321    11455555411                    


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++||||+||++|++++ |..|+...      ...+......   .........+.++.+++.+||+.||++
T Consensus       180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~  250 (262)
T cd05077         180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK------TLAEKERFYE---GQCMLVTPSCKELADLMTHCMNYDPNQ  250 (262)
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc------chhHHHHHHh---cCccCCCCChHHHHHHHHHHcCCChhh
Confidence              12335667999999999999985 55443332      2222211111   111222345678999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       251 Rp~~~~il~~  260 (262)
T cd05077         251 RPFFRAIMRD  260 (262)
T ss_pred             CcCHHHHHHh
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=2.2e-26  Score=151.18  Aligned_cols=132  Identities=23%  Similarity=0.231  Sum_probs=95.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH--------------------HhhcC
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL--------------------QRHGL   61 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~--------------------~~~~~   61 (152)
                      +++|++.+++.++.|++.||+|||+.+      ||+||+++.++   .+++  ||                    ...+.
T Consensus        11 ~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~---~~~~--fG~~~~~~~~~~~g~~~y~aPE~~~~~   79 (176)
T smart00750       11 GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDG---LLKL--DGSVAFKTPEQSRVDPYFMAPEVIQGQ   79 (176)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCcc---ceee--ccceEeeccccCCCcccccChHHhcCC
Confidence            456999999999999999999999998      99999998763   3333  33                    23344


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC-----CCCCCCCh--hHHHHHHHhhccccC
Q 039869           62 LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP-----EFPSNISE--DGRDFLSKCFIRVHQ  134 (152)
Q Consensus        62 ~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~ll~~~l~~~p~  134 (152)
                      .++.++||||+||++|++++|+.|+....     ................     ..+..++.  ++.+++.+||..+|+
T Consensus        80 ~~~~~~DiwSlG~il~elltg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~  154 (176)
T smart00750       80 SYTEKADIYSLGITLYEALDYELPYNEER-----ELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQ  154 (176)
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCCccccc-----hhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccc
Confidence            56788999999999999999997765432     1112221111111100     11222333  689999999999999


Q ss_pred             CCcCHHHHhcCCCCC
Q 039869          135 LRWTAKHVLAHPFPS  149 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~  149 (152)
                      +||++.++++|+|+.
T Consensus       155 ~Rp~~~~ll~~~~~~  169 (176)
T smart00750      155 RREAANHYLAHCRAL  169 (176)
T ss_pred             cccCHHHHHHHHHHH
Confidence            999999999999864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.94  E-value=6.6e-26  Score=156.65  Aligned_cols=132  Identities=17%  Similarity=0.225  Sum_probs=103.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~   60 (152)
                      ..+++..+..++.|++.||++||++|++||||||+||+++.+   +.++++||+..                      .+
T Consensus        95 ~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~  171 (254)
T cd05083          95 ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSED---GVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKH  171 (254)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC---CcEEECCCccceeccccCCCCCCCceecCHHHhcc
Confidence            357889999999999999999999999999999999999876   45667776622                      12


Q ss_pred             CCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           61 LLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      ..++.++|+||+|+++|++++ |..|+...      ...+........ ..+..+..++..+.+++.+||+.+|++||++
T Consensus       172 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  244 (254)
T cd05083         172 KKFSSKSDVWSYGVLLWEVFSYGRAPYPKM------SLKEVKECVEKG-YRMEPPEGCPADVYVLMTSCWETEPKKRPSF  244 (254)
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCccC------CHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcCCChhhCcCH
Confidence            234567999999999999998 77555443      344444444433 3344456788999999999999999999999


Q ss_pred             HHHhc
Q 039869          140 KHVLA  144 (152)
Q Consensus       140 ~~~l~  144 (152)
                      .++++
T Consensus       245 ~~l~~  249 (254)
T cd05083         245 HKLRE  249 (254)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=8.5e-26  Score=156.65  Aligned_cols=132  Identities=14%  Similarity=0.233  Sum_probs=102.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||.+||+.|++|+||||+||+++.+   +.++++||+..                        
T Consensus        98 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  174 (261)
T cd05068          98 RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGEN---NICKVADFGLARVIKEDIYEAREGAKFPIKWTAPE  174 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCC---CCEEECCcceEEEccCCcccccCCCcCceeccCcc
Confidence            358899999999999999999999999999999999999877   45666666521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||||+++|++++ |+.|+.+.      ........+... .....+...+..+.+++.+|++.+|++
T Consensus       175 ~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~  247 (261)
T cd05068         175 AALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM------TNAEVLQQVDQG-YRMPCPPGCPKELYDIMLDCWKEDPDD  247 (261)
T ss_pred             ccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHhhcCccc
Confidence              11223567999999999999999 77555443      334444444322 233455678899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++.+
T Consensus       248 Rp~~~~l~~  256 (261)
T cd05068         248 RPTFETLQW  256 (261)
T ss_pred             CCCHHHHHH
Confidence            999998863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=2.9e-26  Score=157.83  Aligned_cols=142  Identities=24%  Similarity=0.348  Sum_probs=103.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------hhc
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------RHG   60 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~~~   60 (152)
                      ++-..+.++..|+++|+.+||+.||+||||||+||++...   ..+++.|||.                        ..|
T Consensus       115 lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~---~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~  191 (369)
T KOG0665|consen  115 LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD---CTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILG  191 (369)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch---hheeeccchhhcccCcccccCchhheeeccCchheec
Confidence            4557889999999999999999999999999999999877   6677777772                        234


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC----------ChH------HHHHH----------HHhcCCCCC--
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA----------SRD------DLLEL----------IAFSSEVPE--  112 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~----------~~~------~~~~~----------~~~~~~~~~--  112 (152)
                      ..+...+||||+||++.||++|...|.|....+..          +..      .....          ..+....++  
T Consensus       192 ~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~  271 (369)
T KOG0665|consen  192 MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSL  271 (369)
T ss_pred             cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCccc
Confidence            44678899999999999999999888765432110          000      00000          000010110  


Q ss_pred             C------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          113 F------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       113 ~------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                      +      +..-..-+++++.+||..+|++|.+++++|.|||++
T Consensus       272 f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  272 FPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             ccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            0      111234478999999999999999999999999996

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.94  E-value=3.4e-26  Score=151.92  Aligned_cols=140  Identities=26%  Similarity=0.412  Sum_probs=104.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------hhc-----
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------RHG-----   60 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------~~~-----   60 (152)
                      .|+.-.++.++.|+++||.|+|+.||.|||+||.|++|+...  +.+.+.|+|.                  +.|     
T Consensus       128 tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~--rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLV  205 (338)
T KOG0668|consen  128 TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL--RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV  205 (338)
T ss_pred             hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh--ceeeeeecchHhhcCCCceeeeeeehhhcCCchhee
Confidence            467788999999999999999999999999999999998542  4555666651                  122     


Q ss_pred             --CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH------------HHhcCC--CC-------------
Q 039869           61 --LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL------------IAFSSE--VP-------------  111 (152)
Q Consensus        61 --~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~--~~-------------  111 (152)
                        ..++.+.|+|||||.+++|+..+.||+....    +.+.+...            +..-..  .+             
T Consensus       206 dy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d----N~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~  281 (338)
T KOG0668|consen  206 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD----NYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKP  281 (338)
T ss_pred             echhccccHHHHHHHHHHHHHHhccCcccCCCC----CHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccccc
Confidence              2247889999999999999999989986543    22222211            110000  00             


Q ss_pred             -------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          112 -------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       112 -------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                             .-..-.++++.+|+.++|.+|-++|+|+.+++.||||.
T Consensus       282 w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~  326 (338)
T KOG0668|consen  282 WSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA  326 (338)
T ss_pred             HHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence                   01122568999999999999999999999999999996

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=2.4e-26  Score=162.77  Aligned_cols=131  Identities=16%  Similarity=0.177  Sum_probs=97.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.|++.||+|||+.|++||||||+||+++.+   +.++++|||...                        
T Consensus       134 ~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~---~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE  210 (304)
T cd05096         134 AISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGEN---LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWE  210 (304)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCC---ccEEECCCccceecccCceeEecCcCCCCccccCHH
Confidence            46778899999999999999999999999999999999877   566777776321                        


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHhc--CcccCCccCCCCCChHHHHHHHHh------cCCCCCCCCCCChhHHHHHHHh
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMTA--EISAWGSFGRGLASRDDLLELIAF------SSEVPEFPSNISEDGRDFLSKC  128 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ll~~~  128 (152)
                         +..++.++|+||||+++|+++++  ..|+...      ...........      .......+..++..+.+++.+|
T Consensus       211 ~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  284 (304)
T cd05096         211 CILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL------TDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQC  284 (304)
T ss_pred             HHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC------CHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHH
Confidence               22346689999999999999874  3333332      22222221110      1111233456789999999999


Q ss_pred             hccccCCCcCHHHHh
Q 039869          129 FIRVHQLRWTAKHVL  143 (152)
Q Consensus       129 l~~~p~~R~~~~~~l  143 (152)
                      |..+|++||++.++.
T Consensus       285 l~~~p~~RPs~~~i~  299 (304)
T cd05096         285 WSRDCRERPSFSDIH  299 (304)
T ss_pred             ccCCchhCcCHHHHH
Confidence            999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.93  E-value=5.2e-26  Score=162.84  Aligned_cols=146  Identities=27%  Similarity=0.332  Sum_probs=105.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------H   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------~   59 (152)
                      .++++..+..++.|++.||++||+.+++|+||+|+||+++.+   +.+++++|+..                       .
T Consensus       103 ~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         103 RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN---CDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCC---CCEEeCccccccccCCCcCCCcccccccCceeeec
Confidence            467889999999999999999999999999999999999876   45666666521                       1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---------CChHHHHHH---------HHhcCCCC-----CCCCC
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---------ASRDDLLEL---------IAFSSEVP-----EFPSN  116 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~---------~~~~~~~~-----~~~~~  116 (152)
                      +..++.++|+||+|+++|++++|..||.+......         ....++...         ........     .....
T Consensus       180 ~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (328)
T cd07856         180 WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKN  259 (328)
T ss_pred             cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCC
Confidence            12346779999999999999999977654321000         000000000         00000001     11234


Q ss_pred             CChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          117 ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       117 ~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ++.++.+++.+||+.+|++||++.+++.||||+..
T Consensus       260 ~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         260 ADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence            67889999999999999999999999999999753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=3.7e-26  Score=160.73  Aligned_cols=142  Identities=22%  Similarity=0.333  Sum_probs=108.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------------   60 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~---------------------   60 (152)
                      ++++++..+..++.|++.||.|||+.|++|+||+|+||+++.+   +.++++||+....                     
T Consensus        99 ~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aP  175 (290)
T cd05613          99 RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSN---GHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAP  175 (290)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCC---CCEEEeeCccceecccccccccccccCCcccCCh
Confidence            3568899999999999999999999999999999999999876   4566777652110                     


Q ss_pred             -------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           61 -------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        61 -------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                             ...+.++|+||+|+++|++++|..|+.....  ......+......  ..+..+..++..+.+++.+||..+|
T Consensus       176 E~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~l~~~p  251 (290)
T cd05613         176 DIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE--KNSQAEISRRILK--SEPPYPQEMSALAKDIIQRLLMKDP  251 (290)
T ss_pred             hhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc--cccHHHHHHHhhc--cCCCCCccCCHHHHHHHHHHhcCCH
Confidence                   1134579999999999999999966643211  1122233332222  2334566788999999999999999


Q ss_pred             CCCc-----CHHHHhcCCCCCC
Q 039869          134 QLRW-----TAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~-----~~~~~l~h~~~~~  150 (152)
                      ++||     ++.+++.||||+.
T Consensus       252 ~~R~~~~~~~~~~l~~~~~~~~  273 (290)
T cd05613         252 KKRLGCGPSDADEIKKHPFFQK  273 (290)
T ss_pred             HHhcCCCCCCHHHHHcCccccc
Confidence            9997     8899999999975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.93  E-value=7.5e-26  Score=158.21  Aligned_cols=132  Identities=17%  Similarity=0.295  Sum_probs=101.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .++...+..++.|++.||+|||+.+++|+||||+||+++.+   +.++++||+..                         
T Consensus       115 ~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05062         115 PPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE  191 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC---CCEEECCCCCccccCCcceeecCCCCccCHhhcChh
Confidence            35678899999999999999999999999999999999876   45566666521                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||||+++|++++ |..|+.+.      ........+... ..+..+..++..+.+++.+||..+|++
T Consensus       192 ~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~  264 (277)
T cd05062         192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM------SNEQVLRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNPKM  264 (277)
T ss_pred             HhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCChhh
Confidence              12234677999999999999999 55444333      334444444332 234556778899999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       265 Rps~~e~l~~  274 (277)
T cd05062         265 RPSFLEIISS  274 (277)
T ss_pred             CcCHHHHHHH
Confidence            9999998864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=6.4e-26  Score=159.01  Aligned_cols=138  Identities=20%  Similarity=0.276  Sum_probs=101.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++.+++.++.|++.||.|||+++++|+||||+||+++.+   ..++++|||...                       
T Consensus       102 ~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (283)
T cd05080         102 HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA  178 (283)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCC---CcEEEeecccccccCCcchhhccCCCCCCCceeeC
Confidence            358899999999999999999999999999999999999876   556666665221                       


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCC---------CCChHHHHHHHHhcCCCCCCCCCCChhHHHHH
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG---------LASRDDLLELIAFSSEVPEFPSNISEDGRDFL  125 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  125 (152)
                           +...+.++|+||||+++|++++|..|+.......         ............ .....+.+..++.++.+++
T Consensus       179 PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li  257 (283)
T cd05080         179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE-RGMRLPCPKNCPQEVYILM  257 (283)
T ss_pred             HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh-cCCCCCCCCCCCHHHHHHH
Confidence                 1223567999999999999999986654332100         000111111111 1223345667889999999


Q ss_pred             HHhhccccCCCcCHHHHhc
Q 039869          126 SKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~~~l~  144 (152)
                      ..||..+|++||++.++++
T Consensus       258 ~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         258 KNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHhccChhhCCCHHHHHH
Confidence            9999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.93  E-value=1.1e-25  Score=158.17  Aligned_cols=131  Identities=18%  Similarity=0.238  Sum_probs=102.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++.+++.++.|++.||++||+++++|+||||+||+++.+   ..++++|||..                         
T Consensus       126 ~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  202 (288)
T cd05050         126 PLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPE  202 (288)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC---CceEECccccceecccCccccccCCCccChhhcCHH
Confidence            47888999999999999999999999999999999999876   45566666521                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+|||||++|++++ |..|+.+.      ...+....+.... ....+..++.++.+++.+||+.+|++
T Consensus       203 ~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~  275 (288)
T cd05050         203 SIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM------AHEEVIYYVRDGN-VLSCPDNCPLELYNLMRLCWSKLPSD  275 (288)
T ss_pred             HHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccCccc
Confidence              22334567999999999999997 66566554      4445555444333 23345678899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.+++.
T Consensus       276 Rpt~~el~~  284 (288)
T cd05050         276 RPSFASINR  284 (288)
T ss_pred             CCCHHHHHH
Confidence            999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=3.5e-26  Score=173.28  Aligned_cols=131  Identities=21%  Similarity=0.293  Sum_probs=115.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .+|+..+.+.||.||+.|+.||-++.+|||||...|+||+++   ..|||+|||..                        
T Consensus       598 ~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~---l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMpp  674 (774)
T KOG1026|consen  598 PPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN---LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPP  674 (774)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc---eEEEecccccchhhhhhhhhcccCCceeeeecCCH
Confidence            458999999999999999999999999999999999999988   88899999822                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         ....++..+||||+||+|||+++ |++|+++.      ...++.+.+..+.. .+-|..+|.++.+|+..||+..|+
T Consensus       675 EsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl------Sn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~  747 (774)
T KOG1026|consen  675 ESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL------SNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPK  747 (774)
T ss_pred             HHhhcCcccchhhhhhhhhhhhhhhccccCccccc------chHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcc
Confidence               23335889999999999999988 56666665      77888888887776 677899999999999999999999


Q ss_pred             CCcCHHHHh
Q 039869          135 LRWTAKHVL  143 (152)
Q Consensus       135 ~R~~~~~~l  143 (152)
                      +||++.++-
T Consensus       748 ~RPsF~eI~  756 (774)
T KOG1026|consen  748 RRPSFKEIH  756 (774)
T ss_pred             cCCCHHHHH
Confidence            999999863

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=1.1e-25  Score=155.74  Aligned_cols=131  Identities=18%  Similarity=0.233  Sum_probs=102.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..+..++.|++.||.|||+++++|+||+|+||+++.+   ..++++||+..                         
T Consensus        96 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~  172 (256)
T cd05114          96 KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV  172 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCC---CeEEECCCCCccccCCCceeccCCCCCchhhCChhh
Confidence            47889999999999999999999999999999999999876   44556665511                         


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+|+++|++++ |+.|+...      +..+....+.... .+..+...+.++.+++.+||..+|++|
T Consensus       173 ~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~------~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~c~~~~p~~R  245 (256)
T cd05114         173 FNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK------SNYEVVEMISRGF-RLYRPKLASMTVYEVMYSCWHEKPEGR  245 (256)
T ss_pred             cccCccchhhhhHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHccCCcccC
Confidence             12234678999999999999999 77555443      3344444443322 233456678889999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       246 ps~~~l~~  253 (256)
T cd05114         246 PTFAELLR  253 (256)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.93  E-value=9.7e-26  Score=156.29  Aligned_cols=132  Identities=17%  Similarity=0.252  Sum_probs=102.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.++..++.|++.||++||+.|++|+||+|+||+++.+   ..++++||+..                        
T Consensus        97 ~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe  173 (260)
T cd05067          97 IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSET---LCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE  173 (260)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCC---CCEEEccCcceeecCCCCcccccCCcccccccCHH
Confidence            467889999999999999999999999999999999999876   45566666522                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      +..+........ .....+...+.++.+++.+|+..+|++
T Consensus       174 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~  246 (260)
T cd05067         174 AINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM------TNPEVIQNLERG-YRMPRPDNCPEELYELMRLCWKEKPEE  246 (260)
T ss_pred             HhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC------ChHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhh
Confidence              11223567999999999999998 88666443      334444443322 233456678899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++++++.
T Consensus       247 Rp~~~~l~~  255 (260)
T cd05067         247 RPTFEYLRS  255 (260)
T ss_pred             CCCHHHHHH
Confidence            999998764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.93  E-value=1.3e-25  Score=158.17  Aligned_cols=133  Identities=20%  Similarity=0.215  Sum_probs=99.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||+++++|+||||+||+++..   ..++++|||..                        
T Consensus       125 ~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (296)
T cd05051         125 KSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN---YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAW  201 (296)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC---CceEEccccceeecccCcceeecCcCCCCceecCH
Confidence            368999999999999999999999999999999999999876   55566666521                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh--cCcccCCccCCCCCChHHHHHHHHhc------CCCCCCCCCCChhHHHHHHH
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT--AEISAWGSFGRGLASRDDLLELIAFS------SEVPEFPSNISEDGRDFLSK  127 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ll~~  127 (152)
                         .+..++.++||||+|+++|++++  +..|+...      ............      ......+..++.++.+++.+
T Consensus       202 E~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  275 (296)
T cd05051         202 ESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL------TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLE  275 (296)
T ss_pred             HHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc------ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHH
Confidence               12234678999999999999998  44333222      223333322211      11123345678899999999


Q ss_pred             hhccccCCCcCHHHHhc
Q 039869          128 CFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       128 ~l~~~p~~R~~~~~~l~  144 (152)
                      ||..+|++||++.++++
T Consensus       276 cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         276 CWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HhccChhcCCCHHHHHH
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.93  E-value=1.3e-25  Score=156.18  Aligned_cols=133  Identities=17%  Similarity=0.260  Sum_probs=103.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.++..++.|++.||++||+++++|+||||+||+++.+   ..++++||+..                        
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~P  177 (266)
T cd05033         101 GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN---LVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAP  177 (266)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC---CCEEECccchhhcccccccceeccCCCCCccccCh
Confidence            468899999999999999999999999999999999999876   44556665522                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++|++++ |..|+...      ...+....+.... ..+.+..++..+.+++..|+..+|+
T Consensus       178 e~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~  250 (266)
T cd05033         178 EAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM------SNQDVIKAVEDGY-RLPPPMDCPSALYQLMLDCWQKDRN  250 (266)
T ss_pred             hhhccCCCccccchHHHHHHHHHHHccCCCCCCCC------CHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcc
Confidence               11223567999999999999998 77555443      3344444443322 3344567899999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       251 ~Rp~~~ei~~~  261 (266)
T cd05033         251 ERPTFSQIVST  261 (266)
T ss_pred             cCcCHHHHHHH
Confidence            99999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=5.8e-26  Score=176.29  Aligned_cols=139  Identities=29%  Similarity=0.406  Sum_probs=115.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh--------------h----------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR--------------H----------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~--------------~----------   59 (152)
                      +++++.++.|+..|+.||.-||+.|+|||||||+|+|+|..   +.++++|||+.              .          
T Consensus       171 ~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~---GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEv  247 (1317)
T KOG0612|consen  171 RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS---GHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEV  247 (1317)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc---CcEeeccchhHHhcCCCCcEEeccccCCCCccCHHH
Confidence            68999999999999999999999999999999999999998   89999999821              1          


Q ss_pred             ------c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC--CCCChhHHHHHHHhhc
Q 039869           60 ------G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFI  130 (152)
Q Consensus        60 ------~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~  130 (152)
                            | ..|..-+|-||+||++|||+.|..|||..      .-.+...++..-.....+|  ..+|++..+||..++.
T Consensus       248 Lqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------slveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~  321 (1317)
T KOG0612|consen  248 LQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------SLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC  321 (1317)
T ss_pred             HHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------HHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc
Confidence                  1 23456789999999999999999999876      4455555554444455555  5699999999997664


Q ss_pred             cccCCCcC---HHHHhcCCCCCCCC
Q 039869          131 RVHQLRWT---AKHVLAHPFPSVDE  152 (152)
Q Consensus       131 ~~p~~R~~---~~~~l~h~~~~~~~  152 (152)
                       +|+.|..   ++++..||||.+.+
T Consensus       322 -~~e~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  322 -DREVRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             -ChhhhcccccHHHHHhCccccCCC
Confidence             5888887   99999999999864

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=1.3e-25  Score=155.62  Aligned_cols=132  Identities=17%  Similarity=0.240  Sum_probs=101.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||+|||+.+++|+||||+||+++..   +.++++||+..                        
T Consensus        98 ~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  174 (261)
T cd05072          98 GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSES---LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE  174 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCC---CcEEECCCccceecCCCceeccCCCccceecCCHH
Confidence            457788999999999999999999999999999999999876   45556665521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+...      ........+... ...+.+..++.++.+++.+|+..+|++
T Consensus       175 ~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~  247 (261)
T cd05072         175 AINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM------SNSDVMSALQRG-YRMPRMENCPDELYDIMKTCWKEKAEE  247 (261)
T ss_pred             HhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCCccc
Confidence              12223557999999999999998 77665443      333444443322 223344568899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++.+
T Consensus       248 Rp~~~~i~~  256 (261)
T cd05072         248 RPTFDYLQS  256 (261)
T ss_pred             CcCHHHHHH
Confidence            999998763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.93  E-value=8.1e-26  Score=158.86  Aligned_cols=141  Identities=27%  Similarity=0.380  Sum_probs=106.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.+|++||+.+++|+||+|+||+++.+   +.++++||+..                        
T Consensus       100 ~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  176 (288)
T cd05583         100 EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSE---GHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPE  176 (288)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC---CCEEEEECccccccccccccccccccCCccccCHH
Confidence            568899999999999999999999999999999999999876   44555555411                        


Q ss_pred             --hcC--CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 --HGL--LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 --~~~--~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        .+.  ..+.++|+||+|+++|++++|..|+.....  .....++.+...  ...+..+..++..+.+++.+||..+|+
T Consensus       177 ~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~  252 (288)
T cd05583         177 VIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE--QNSQSEISRRIL--KSKPPFPKTMSAEARDFIQKLLEKDPK  252 (288)
T ss_pred             HhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc--cchHHHHHHHHH--ccCCCCCcccCHHHHHHHHHHhcCCHh
Confidence              111  135679999999999999999966643211  011223333222  223455677889999999999999999


Q ss_pred             CCcC---HHHHhcCCCCCC
Q 039869          135 LRWT---AKHVLAHPFPSV  150 (152)
Q Consensus       135 ~R~~---~~~~l~h~~~~~  150 (152)
                      +|||   +.+++.||||+.
T Consensus       253 ~R~t~~~~~~~l~~~~~~~  271 (288)
T cd05583         253 KRLGANGADEIKNHPFFQG  271 (288)
T ss_pred             hccCcchHHHHhcCccccc
Confidence            9998   457799999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.93  E-value=1.4e-25  Score=160.90  Aligned_cols=132  Identities=19%  Similarity=0.311  Sum_probs=103.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .++..++..++.|++.||+|||++|++||||||+||+++.+   ..++++||+..                         
T Consensus       130 ~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  206 (334)
T cd05100         130 QLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED---NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPE  206 (334)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC---CcEEECCcccceecccccccccccCCCcCceEcCHH
Confidence            46788899999999999999999999999999999999876   45566666521                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||||+++|++++ |..|+.+.      ...+....+.. ....+.+..++.++.+++.+||..+|++
T Consensus       207 ~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~  279 (334)
T cd05100         207 ALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI------PVEELFKLLKE-GHRMDKPANCTHELYMIMRECWHAVPSQ  279 (334)
T ss_pred             HhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcccChhh
Confidence              12224567999999999999998 66555443      44455444433 3344556778899999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       280 Rps~~ell~~  289 (334)
T cd05100         280 RPTFKQLVED  289 (334)
T ss_pred             CcCHHHHHHH
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.93  E-value=1.7e-25  Score=155.63  Aligned_cols=132  Identities=17%  Similarity=0.260  Sum_probs=102.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.++..++.|++.|++|||+.|++|+||||+||+++.+   ..++++||+..                        
T Consensus       102 ~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~  178 (268)
T cd05063         102 GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSN---LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTA  178 (268)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCC---CcEEECCCccceecccccccceeccCCCcCceecC
Confidence            468899999999999999999999999999999999999876   44555665511                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||+|+++|++++ |..|++..      ...+....+... ...+.+..++.++.+++.+|+..+|
T Consensus       179 PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~c~~~~p  251 (268)
T cd05063         179 PEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDM------SNHEVMKAINDG-FRLPAPMDCPSAVYQLMLQCWQQDR  251 (268)
T ss_pred             HHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcC------CHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCCc
Confidence                12223567999999999999997 88777554      334444444332 2333456688999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       252 ~~Rp~~~~i~~  262 (268)
T cd05063         252 ARRPRFVDIVN  262 (268)
T ss_pred             ccCcCHHHHHH
Confidence            99999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.93  E-value=1.2e-25  Score=157.28  Aligned_cols=132  Identities=15%  Similarity=0.214  Sum_probs=102.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.+++.++.|++.||+|||+++++|+||||+||+++.+   ..+++++|+..                        
T Consensus       112 ~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~ap  188 (280)
T cd05043         112 QALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE---LQVKITDNALSRDLFPMDYHCLGDNENRPVKWMAL  188 (280)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC---CcEEECCCCCcccccCCceEEeCCCCCcchhccCH
Confidence            458899999999999999999999999999999999999766   44455555422                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++|++++ |+.|+...      ...++....... .....+..+++++.+++.+|+..+|+
T Consensus       189 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~  261 (280)
T cd05043         189 ESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI------DPFEMAAYLKDG-YRLAQPINCPDELFAVMACCWALDPE  261 (280)
T ss_pred             HHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC------CHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCChh
Confidence               22334678999999999999998 88666443      344444444332 23344566789999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.+++.
T Consensus       262 ~Rps~~~~~~  271 (280)
T cd05043         262 ERPSFSQLVQ  271 (280)
T ss_pred             hCCCHHHHHH
Confidence            9999999863

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.93  E-value=1e-25  Score=162.13  Aligned_cols=134  Identities=16%  Similarity=0.267  Sum_probs=101.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.++..++..++.|++.||+|||+++++||||||+||+++.+   ..++++||+...                       
T Consensus       174 ~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  250 (343)
T cd05103         174 KVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEN---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  250 (343)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCC---CcEEEEecccccccccCcchhhcCCCCCCcceECc
Confidence            357889999999999999999999999999999999999876   456677766221                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++|+||+|+++|++++ |..|+....     .......... .......+...++++.+++..||..+|+
T Consensus       251 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~cl~~~p~  324 (343)
T cd05103         251 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPS  324 (343)
T ss_pred             HHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcc-----ccHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHccCChh
Confidence                2224567899999999999997 665554331     1222222222 2223445566788999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.++++|
T Consensus       325 ~Rps~~eil~~  335 (343)
T cd05103         325 QRPTFSELVEH  335 (343)
T ss_pred             hCcCHHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.93  E-value=8.5e-26  Score=159.40  Aligned_cols=132  Identities=18%  Similarity=0.179  Sum_probs=97.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++.++..++.|++.||+|||+.|++|+||||+||+++.+   ..++++|||..                         
T Consensus       126 ~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe  202 (296)
T cd05095         126 TISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN---YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWE  202 (296)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC---CCEEeccCcccccccCCcceeccCcCcCccccCCHH
Confidence            46788999999999999999999999999999999999866   45566666522                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh--cCcccCCccCCCCCChHHHHHHHH------hcCCCCCCCCCCChhHHHHHHHh
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT--AEISAWGSFGRGLASRDDLLELIA------FSSEVPEFPSNISEDGRDFLSKC  128 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ll~~~  128 (152)
                        .+..++.++|+||+||++|++++  +..|+...      ...+......      ......+.+..++..+.+++..|
T Consensus       203 ~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  276 (296)
T cd05095         203 SILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL------SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSC  276 (296)
T ss_pred             HHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc------ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHH
Confidence              11223568999999999999998  45444332      2222222111      01112234566789999999999


Q ss_pred             hccccCCCcCHHHHhc
Q 039869          129 FIRVHQLRWTAKHVLA  144 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~  144 (152)
                      |..||++||++.++++
T Consensus       277 l~~~p~~Rp~~~~i~~  292 (296)
T cd05095         277 WRRNAKERPSFQEIHA  292 (296)
T ss_pred             cCCCcccCCCHHHHHH
Confidence            9999999999998864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.93  E-value=2.5e-25  Score=155.31  Aligned_cols=133  Identities=18%  Similarity=0.300  Sum_probs=101.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      ++++..+..++.|++.||+|||+++++|+||||+||+++..   ..+++++++.                          
T Consensus       113 ~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  189 (275)
T cd05046         113 PLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ---REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEA  189 (275)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC---CcEEEcccccccccCcccccccCCceeEEeecChhh
Confidence            68999999999999999999999999999999999999876   3444444432                          


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+...+.++|+||+|+++|++++ |..|+...      ..................+..++..+.+++.+||..+|++|
T Consensus       190 ~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R  263 (275)
T cd05046         190 VQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL------SDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDR  263 (275)
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCCcccc------chHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            122234567999999999999998 55454332      33344444443333334456788999999999999999999


Q ss_pred             cCHHHHhcC
Q 039869          137 WTAKHVLAH  145 (152)
Q Consensus       137 ~~~~~~l~h  145 (152)
                      |++.+++..
T Consensus       264 p~~~~~l~~  272 (275)
T cd05046         264 PSFSELVSA  272 (275)
T ss_pred             CCHHHHHHH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.93  E-value=1.1e-25  Score=164.96  Aligned_cols=133  Identities=22%  Similarity=0.330  Sum_probs=102.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..+..++.|++.||+|||+.+++|+||||+||+++.+   ..++++|||..                        
T Consensus       232 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~---~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  308 (400)
T cd05105         232 EGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG---KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAP  308 (400)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC---CEEEEEeCCcceeccccccccccCCcCCCcceECh
Confidence            468899999999999999999999999999999999999876   44566666521                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||||+++|++++ |..|+....     ....+...+. ....+..+..++.++.+++.+||+.+|+
T Consensus       309 E~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~  382 (400)
T cd05105         309 ESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI-----VDSTFYNKIK-SGYRMAKPDHATQEVYDIMVKCWNSEPE  382 (400)
T ss_pred             hhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc-----hhHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHCccCHh
Confidence               12234678999999999999997 776665432     2223333333 2233445677899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++.+
T Consensus       383 ~RPt~~~l~~  392 (400)
T cd05105         383 KRPSFLHLSD  392 (400)
T ss_pred             HCcCHHHHHH
Confidence            9999988754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4.7e-26  Score=165.22  Aligned_cols=140  Identities=21%  Similarity=0.246  Sum_probs=121.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------hhcC--------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------RHGL--------   61 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------~~~~--------   61 (152)
                      ++.|++..++.|+..+++|++|||++||++|||||+|++++.++   =+++.|||.            +.|+        
T Consensus       514 Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G---y~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEI  590 (732)
T KOG0614|consen  514 RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG---YLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEI  590 (732)
T ss_pred             cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC---ceEEeehhhHHHhccCCceeeecCCcccccchh
Confidence            56799999999999999999999999999999999999999984   445556652            2222        


Q ss_pred             ----CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           62 ----LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        62 ----~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                          ..+.++|.||||+++||+++|.+||.+.      ++......+..+-....+|..++....++++++...+|.+|.
T Consensus       591 ILnKGHD~avDyWaLGIli~ELL~G~pPFs~~------dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  591 ILNKGHDRAVDYWALGILIYELLTGSPPFSGV------DPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             hhccCcchhhHHHHHHHHHHHHHcCCCCCCCC------chHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhh
Confidence                2367899999999999999999888776      778888888888888899999999999999999999999998


Q ss_pred             C-----HHHHhcCCCCCC
Q 039869          138 T-----AKHVLAHPFPSV  150 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~  150 (152)
                      .     +.++-.|.||.+
T Consensus       665 G~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             ccccCChHHHHhhhhhhc
Confidence            5     778999999975

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=2.8e-25  Score=154.28  Aligned_cols=131  Identities=18%  Similarity=0.245  Sum_probs=100.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||++||+.+++|+||||+||+++.+   +.++++||+..                        
T Consensus        97 ~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~---~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE  173 (262)
T cd05071          97 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE  173 (262)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCC---CcEEeccCCceeeccccccccccCCcccceecCHh
Confidence            347889999999999999999999999999999999999876   45566666521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      ............ .....+..++..+.+++.+|+..+|++
T Consensus       174 ~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~  246 (262)
T cd05071         174 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------VNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEE  246 (262)
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC------ChHHHHHHHhcC-CCCCCccccCHHHHHHHHHHccCCccc
Confidence              11223568999999999999999 66444333      333333333322 223345678899999999999999999


Q ss_pred             CcCHHHHh
Q 039869          136 RWTAKHVL  143 (152)
Q Consensus       136 R~~~~~~l  143 (152)
                      ||++.+++
T Consensus       247 Rp~~~~~~  254 (262)
T cd05071         247 RPTFEYLQ  254 (262)
T ss_pred             CCCHHHHH
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=3.4e-25  Score=153.19  Aligned_cols=131  Identities=16%  Similarity=0.215  Sum_probs=102.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hcC
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HGL   61 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~~   61 (152)
                      .+++..+..++.|++.||.|||.++++|+||||+||+++.+   ..++++||+..                      .+.
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~  174 (256)
T cd05039          98 VITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSED---LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREK  174 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCC---CCEEEcccccccccccccccCCCcccccCchhhcCC
Confidence            68899999999999999999999999999999999999877   45566776521                      112


Q ss_pred             CCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHH
Q 039869           62 LLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK  140 (152)
Q Consensus        62 ~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~  140 (152)
                      .++.++|+||+|+++|++++ |..|+...      ....+...+... .....+..+++++.+++.+||..+|++||++.
T Consensus       175 ~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  247 (256)
T cd05039         175 KFSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDVVPHVEKG-YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFK  247 (256)
T ss_pred             cCCcHHHHHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHhcC-CCCCCccCCCHHHHHHHHHHhccChhhCcCHH
Confidence            23457999999999999997 77554333      444444444322 23445667899999999999999999999999


Q ss_pred             HHhc
Q 039869          141 HVLA  144 (152)
Q Consensus       141 ~~l~  144 (152)
                      ++++
T Consensus       248 ~l~~  251 (256)
T cd05039         248 QLRE  251 (256)
T ss_pred             HHHH
Confidence            9874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=1.7e-25  Score=155.02  Aligned_cols=134  Identities=14%  Similarity=0.224  Sum_probs=99.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCc-----hhHHHHHHHHh--------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA-----HEAEISAFLQR--------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~-----~~~~l~~~~~~--------------------   58 (152)
                      .+++..++.++.||+.||+|||+++++||||||+||+++.+...     ..+++.+|+..                    
T Consensus        96 ~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~  175 (258)
T cd05078          96 LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPEC  175 (258)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchh
Confidence            47899999999999999999999999999999999999765322     12455555411                    


Q ss_pred             -h-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -H-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       . +..++.++|+||+|+++|++++|..+++...     .........   .....+|...+.++.+++.+||+.+|++|
T Consensus       176 ~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~R  247 (258)
T cd05078         176 IENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL-----DSQKKLQFY---EDRHQLPAPKWTELANLINQCMDYEPDFR  247 (258)
T ss_pred             ccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc-----cHHHHHHHH---HccccCCCCCcHHHHHHHHHHhccChhhC
Confidence             1 1224667999999999999999964554432     222222221   12334556677889999999999999999


Q ss_pred             cCHHHHhcC
Q 039869          137 WTAKHVLAH  145 (152)
Q Consensus       137 ~~~~~~l~h  145 (152)
                      |++.++++.
T Consensus       248 ps~~~il~~  256 (258)
T cd05078         248 PSFRAIIRD  256 (258)
T ss_pred             CCHHHHHHh
Confidence            999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-25  Score=144.57  Aligned_cols=140  Identities=26%  Similarity=0.423  Sum_probs=107.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++.++.+.+++++.|++.||.|+|++++.|||+||.|.+|+.|   +.++++|||..+                      
T Consensus        95 ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~n---gelkladfglarafgipvrcysaevvtlwyrppd  171 (292)
T KOG0662|consen   95 NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRN---GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPD  171 (292)
T ss_pred             CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccC---CcEEecccchhhhcCCceEeeeceeeeeeccCcc
Confidence            4568899999999999999999999999999999999999999   788889988332                      


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHH-Hh-cCCC----C---C-------------
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELI-AF-SSEV----P---E-------------  112 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~----~---~-------------  112 (152)
                          ...|+.+.|+||-||+++|+.. |++.|.+.      +.++....+ .. +...    |   .             
T Consensus       172 vlfgakly~tsidmwsagcifaelanagrplfpg~------dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypat  245 (292)
T KOG0662|consen  172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN------DVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPAT  245 (292)
T ss_pred             eeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC------cHHHHHHHHHHHhCCCccccCCccccCCCCcccCCcccc
Confidence                2224778999999999999987 45555555      322222221 11 1110    0   0             


Q ss_pred             -----CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 -----FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 -----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                           +-..++...+++++++|..+|.+|.+++.+++||||.+
T Consensus       246 tswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  246 TSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             chHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence                 01234556799999999999999999999999999976

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.93  E-value=3.1e-25  Score=157.12  Aligned_cols=131  Identities=20%  Similarity=0.249  Sum_probs=101.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.|++.||+|||+++++|+||||+||+++.+   +.++++|||...                        
T Consensus       105 ~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE  181 (303)
T cd05110         105 NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE  181 (303)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCC---CceEEccccccccccCcccccccCCCccccccCCHH
Confidence            57889999999999999999999999999999999999876   456777776221                        


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         +..++.++|+||||+++|++++ |+.|+.+.      ........... ......+..++..+.+++..|+..+|++
T Consensus       182 ~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~  254 (303)
T cd05110         182 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI------PTREIPDLLEK-GERLPQPPICTIDVYMVMVKCWMIDADS  254 (303)
T ss_pred             HhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence               1223567999999999999997 77555443      33334333332 3333445667889999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       255 Rp~~~~l~~  263 (303)
T cd05110         255 RPKFKELAA  263 (303)
T ss_pred             CcCHHHHHH
Confidence            999999764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=2.1e-25  Score=155.40  Aligned_cols=131  Identities=21%  Similarity=0.366  Sum_probs=100.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..++.++.|++.||+|||+++++|+||||+||+++.+   ..++++||+...                        
T Consensus       109 ~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe  185 (273)
T cd05074         109 TLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN---MTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALE  185 (273)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC---CCEEECcccccccccCCcceecCCCccCchhhcCHh
Confidence            36788999999999999999999999999999999999876   455677765221                        


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         +..++.++|+||+|+++|++++ |+.|+.+.      ........+.... ....+...+..+.+++.+|++.+|+.
T Consensus       186 ~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~  258 (273)
T cd05074         186 SLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV------ENSEIYNYLIKGN-RLKQPPDCLEDVYELMCQCWSPEPKC  258 (273)
T ss_pred             HHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC------CHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhh
Confidence               1223567999999999999999 66554433      3444444443322 22344567899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       259 Rps~~~~~~  267 (273)
T cd05074         259 RPSFQHLRD  267 (273)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.93  E-value=1.6e-25  Score=174.83  Aligned_cols=132  Identities=23%  Similarity=0.264  Sum_probs=101.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------------
Q 039869            7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------------   57 (152)
Q Consensus         7 ~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------------   57 (152)
                      ...++.+++||++||+|+|+.|||||||||.||++++.   ..++|+|||.                             
T Consensus       696 ~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~---~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~  772 (1351)
T KOG1035|consen  696 RDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR---NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDL  772 (1351)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC---CCeeecccccchhhhhhhhhHhhccCccccccCCCCccc
Confidence            67899999999999999999999999999999999977   7888888871                             


Q ss_pred             --------------hhc---CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC--CCCCCC
Q 039869           58 --------------RHG---LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE--FPSNIS  118 (152)
Q Consensus        58 --------------~~~---~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  118 (152)
                                    ..+   ..|+.|+||||+|++++||+.   ||...+     ....+......+..+.+  +..+.-
T Consensus       773 Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM-----ERa~iL~~LR~g~iP~~~~f~~~~~  844 (1351)
T KOG1035|consen  773 TSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM-----ERASILTNLRKGSIPEPADFFDPEH  844 (1351)
T ss_pred             ccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchH-----HHHHHHHhcccCCCCCCcccccccc
Confidence                          111   236789999999999999997   543332     33344444432222111  123344


Q ss_pred             hhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          119 EDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       119 ~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                      +....+|+.+++.||++|||+.++|.+.|+.
T Consensus       845 ~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  845 PEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             hHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            5568899999999999999999999999986

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.93  E-value=3.5e-25  Score=152.61  Aligned_cols=132  Identities=17%  Similarity=0.200  Sum_probs=101.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.+|++||+++++|+||+|+||+++.+   +.++++||+..                        
T Consensus        88 ~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~P  164 (251)
T cd05041          88 NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGEN---NVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAP  164 (251)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCC---CcEEEeeccccccccCCcceeccccCcceeccCCh
Confidence            357889999999999999999999999999999999999876   45566665521                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++|++++ |..|+...      ........+.. ......+...+.++.+++.+|+..+|+
T Consensus       165 E~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~  237 (251)
T cd05041         165 EALNYGRYTSESDVWSYGILLWETFSLGDTPYPGM------SNQQTRERIES-GYRMPAPQLCPEEIYRLMLQCWAYDPE  237 (251)
T ss_pred             HhhccCCCCcchhHHHHHHHHHHHHhccCCCCccC------CHHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHhccChh
Confidence               12234567999999999999999 56444333      33333333332 223345667889999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       238 ~Rp~~~ell~  247 (251)
T cd05041         238 NRPSFSEIYN  247 (251)
T ss_pred             hCcCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.3e-25  Score=152.54  Aligned_cols=132  Identities=20%  Similarity=0.273  Sum_probs=102.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++..+..++.|++.|+++||+++++|+||+|+||+++.+   ..++++||+.                         
T Consensus        98 ~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE  174 (261)
T cd05034          98 KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGEN---LVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPE  174 (261)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCC---CCEEECccccceeccchhhhhhhccCCCccccCHH
Confidence            357899999999999999999999999999999999999877   4555555542                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+...+.++|+||+|+++|++++ |+.|+.+.      ........... ......+...+.++.+++.+|+..+|++
T Consensus       175 ~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~  247 (261)
T cd05034         175 AANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM------TNREVLEQVER-GYRMPRPPNCPEELYDLMLQCWDKDPEE  247 (261)
T ss_pred             HhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcccCccc
Confidence             112334668999999999999998 77665443      33444444432 2233445667899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       248 Rp~~~~l~~  256 (261)
T cd05034         248 RPTFEYLQS  256 (261)
T ss_pred             CCCHHHHHH
Confidence            999998763

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=4.6e-25  Score=151.98  Aligned_cols=132  Identities=16%  Similarity=0.205  Sum_probs=102.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.+|.|+|++|++|+||+|+||+++.+   ..++++||+..                        
T Consensus        88 ~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE  164 (250)
T cd05085          88 DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGEN---NVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPE  164 (250)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCC---CeEEECCCccceeccccccccCCCCCCcccccCHH
Confidence            357899999999999999999999999999999999999876   45566666521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      ........+.. ......+..++..+.+++.+|++.+|++
T Consensus       165 ~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~  237 (250)
T cd05085         165 ALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM------TNQQAREQVEK-GYRMSCPQKCPDDVYKVMQRCWDYKPEN  237 (250)
T ss_pred             HhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC------CHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcccCccc
Confidence              12223567999999999999998 77565443      33333333332 2233456678899999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       238 Rp~~~~l~~  246 (250)
T cd05085         238 RPKFSELQK  246 (250)
T ss_pred             CCCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=1.6e-25  Score=159.14  Aligned_cols=136  Identities=19%  Similarity=0.293  Sum_probs=113.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------H
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------Q   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~   57 (152)
                      ++.|++.+++.+++||+.|+.|+|.++++|||||.+|||++.|   ..++|+|||                        .
T Consensus       147 r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N---~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEI  223 (668)
T KOG0611|consen  147 RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQN---NNIKIADFGLSNLYADKKFLQTFCGSPLYASPEI  223 (668)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCC---CCeeeeccchhhhhccccHHHHhcCCcccCCccc
Confidence            3568999999999999999999999999999999999999999   777888887                        2


Q ss_pred             hhcCCCC-cchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLI-YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~-~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..|.+|. .-+|.||||++||-++.|-.||.+-      +-..+.+++..+.+..   ..-+.....+|+.||..+|++|
T Consensus       224 vNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~------Dhk~lvrQIs~GaYrE---P~~PSdA~gLIRwmLmVNP~RR  294 (668)
T KOG0611|consen  224 VNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR------DHKRLVRQISRGAYRE---PETPSDASGLIRWMLMVNPERR  294 (668)
T ss_pred             cCCCCCCCCccchhhHHHHHHHHhhcccccCCc------hHHHHHHHhhcccccC---CCCCchHHHHHHHHHhcCcccc
Confidence            2333332 4589999999999999999888776      5566677777666543   2456678899999999999999


Q ss_pred             cCHHHHhcCCCCC
Q 039869          137 WTAKHVLAHPFPS  149 (152)
Q Consensus       137 ~~~~~~l~h~~~~  149 (152)
                      -|+.++..|=|..
T Consensus       295 ATieDiAsHWWvN  307 (668)
T KOG0611|consen  295 ATIEDIASHWWVN  307 (668)
T ss_pred             hhHHHHhhhheee
Confidence            9999999998864

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.93  E-value=9.7e-27  Score=169.15  Aligned_cols=141  Identities=28%  Similarity=0.452  Sum_probs=109.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hhh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QRH   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~~   59 (152)
                      -+|....++.|+.|++.||..|..+|++|.||||+|||++++.  .++++.|||                       ...
T Consensus       531 vGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k--~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiL  608 (752)
T KOG0670|consen  531 VGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK--NILKLCDFGSASFASENEITPYLVSRFYRAPEIIL  608 (752)
T ss_pred             cceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc--ceeeeccCccccccccccccHHHHHHhccCcceee
Confidence            3567789999999999999999999999999999999997652  456788887                       345


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC---------------------------
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE---------------------------  112 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  112 (152)
                      |.+|+...|+||+||.|||+-||+..|.|.+     +.+-+...+......|.                           
T Consensus       609 G~~yd~~iD~WSvgctLYElYtGkIlFpG~T-----NN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~v  683 (752)
T KOG0670|consen  609 GLPYDYPIDTWSVGCTLYELYTGKILFPGRT-----NNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKV  683 (752)
T ss_pred             cCcccCCccceeeceeeEEeeccceecCCCC-----cHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecccc
Confidence            7788999999999999999999999998765     22222111111110000                           


Q ss_pred             ---------------------------CC---CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 ---------------------------FP---SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 ---------------------------~~---~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                                 +|   ......+.+||.+||..||++|.++.++|.||||++
T Consensus       684 T~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  684 TEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             ccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                                       11   112345899999999999999999999999999985

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=5.5e-25  Score=153.07  Aligned_cols=134  Identities=16%  Similarity=0.219  Sum_probs=102.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC--CchhHHHHHHHHh-----------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK--DAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~--~~~~~~l~~~~~~-----------------------   58 (152)
                      .+++.++..++.|++.||+|||+.+++|+||+|+||+++.+.  ....++++||+..                       
T Consensus       102 ~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  181 (269)
T cd05044         102 LLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMA  181 (269)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccC
Confidence            477899999999999999999999999999999999998753  1225566666522                       


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||||+++|++++ |..|+...      ...+....+.. ......+..++..+.+++.+||..+|
T Consensus       182 PE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p  254 (269)
T cd05044         182 PESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL------NNQEVLQHVTA-GGRLQKPENCPDKIYQLMTNCWAQDP  254 (269)
T ss_pred             HHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc------CHHHHHHHHhc-CCccCCcccchHHHHHHHHHHcCCCc
Confidence                12234667999999999999998 88665433      33344444332 22334566788999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       255 ~~Rp~~~~i~~  265 (269)
T cd05044         255 SERPTFDRIQE  265 (269)
T ss_pred             ccCCCHHHHHH
Confidence            99999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.93  E-value=5.4e-25  Score=153.32  Aligned_cols=131  Identities=18%  Similarity=0.224  Sum_probs=102.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..++.++.|++.||+|||+.+++|+||||+||+++.+   +.+++.||+..                         
T Consensus       103 ~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~  179 (270)
T cd05056         103 SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSP---DCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPES  179 (270)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecC---CCeEEccCceeeecccccceecCCCCccccccChhh
Confidence            57899999999999999999999999999999999999876   45566665521                         


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||||+++|++++ |..||.+.      ...+....+..+. ....+..++.++.+++.+|+..+|++|
T Consensus       180 ~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R  252 (270)
T cd05056         180 INFRRFTSASDVWMFGVCMWEILMLGVKPFQGV------KNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSKR  252 (270)
T ss_pred             hccCCCCchhhhHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence             12234567999999999999986 88665443      3333333333322 334567889999999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       253 pt~~~~~~  260 (270)
T cd05056         253 PRFTELKA  260 (270)
T ss_pred             cCHHHHHH
Confidence            99998874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.8e-25  Score=153.86  Aligned_cols=131  Identities=21%  Similarity=0.274  Sum_probs=103.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||+|||+++++|+||||+||+++.+   ..++++||+..                        
T Consensus       104 ~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (279)
T cd05057         104 DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMAL  180 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCC---CeEEECCCcccccccCcccceecCCCcccccccCH
Confidence            458899999999999999999999999999999999999866   44566665521                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++|++++ |..|+.+.      ...++...+... .....+..++.++.+++.+||..+|+
T Consensus       181 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~p~  253 (279)
T cd05057         181 ESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI------PAVEIPDLLEKG-ERLPQPPICTIDVYMVLVKCWMIDAE  253 (279)
T ss_pred             HHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC------CHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHcCCChh
Confidence               12234567999999999999998 88665443      445555555433 23445567889999999999999999


Q ss_pred             CCcCHHHHh
Q 039869          135 LRWTAKHVL  143 (152)
Q Consensus       135 ~R~~~~~~l  143 (152)
                      .||++.+++
T Consensus       254 ~Rp~~~~l~  262 (279)
T cd05057         254 SRPTFKELI  262 (279)
T ss_pred             hCCCHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=4.3e-25  Score=153.71  Aligned_cols=132  Identities=17%  Similarity=0.254  Sum_probs=102.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +.+++.+++.++.|++.||++||++|++|+||||+||+++.+   ..+++.||+.                         
T Consensus       101 ~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y  177 (269)
T cd05065         101 GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRW  177 (269)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCC---CcEEECCCccccccccCccccccccccCCCcceee
Confidence            457899999999999999999999999999999999999866   3445555541                         


Q ss_pred             -----hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           58 -----RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        58 -----~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                           ..+..++.++|+||+||++|++++ |..|++..      +..+....+... ...+.+..++..+.+++..||..
T Consensus       178 ~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~~l~~  250 (269)
T cd05065         178 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM------SNQDVINAIEQD-YRLPPPMDCPTALHQLMLDCWQK  250 (269)
T ss_pred             cCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC------CHHHHHHHHHcC-CcCCCcccCCHHHHHHHHHHcCC
Confidence                 112233567999999999999886 87666554      444454444322 23344567889999999999999


Q ss_pred             ccCCCcCHHHHhc
Q 039869          132 VHQLRWTAKHVLA  144 (152)
Q Consensus       132 ~p~~R~~~~~~l~  144 (152)
                      +|++||++.+++.
T Consensus       251 ~p~~Rp~~~~i~~  263 (269)
T cd05065         251 DRNARPKFGQIVS  263 (269)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=2.6e-25  Score=164.04  Aligned_cols=141  Identities=23%  Similarity=0.366  Sum_probs=121.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC--CCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------hcCC-------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH--GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------HGLL-------   62 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~--~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------~~~~-------   62 (152)
                      +.++.+.++.+++||++||.|||++  -|+|||||=+||+|+  +..+.|||+|.|..           -|++       
T Consensus       138 ~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEm  215 (632)
T KOG0584|consen  138 RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEM  215 (632)
T ss_pred             ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhccccceeccCccccChHH
Confidence            4578889999999999999999988  599999999999995  55689999999832           1222       


Q ss_pred             ----CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           63 ----LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        63 ----~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                          |...+||||||.++.||+|+..|+.-..     ++..+.+++..+..+..+-.--.+++++||.+||.. .+.|++
T Consensus       216 YEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-----n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s  289 (632)
T KOG0584|consen  216 YEENYNELVDVYAFGMCMLEMVTSEYPYSECT-----NPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS  289 (632)
T ss_pred             HhhhcchhhhhhhhhHHHHHHHhccCChhhhC-----CHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC
Confidence                4678999999999999999998887775     888999999887776666555678899999999999 889999


Q ss_pred             HHHHhcCCCCCCC
Q 039869          139 AKHVLAHPFPSVD  151 (152)
Q Consensus       139 ~~~~l~h~~~~~~  151 (152)
                      +.++|.||||+.+
T Consensus       290 a~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  290 AKELLKDPFFDED  302 (632)
T ss_pred             HHHHhhChhhccc
Confidence            9999999999986

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.92  E-value=5.3e-25  Score=161.34  Aligned_cols=133  Identities=17%  Similarity=0.287  Sum_probs=101.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||+|||+.+++||||||+||+++.+   ..++++|||..                        
T Consensus       234 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~---~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  310 (401)
T cd05107         234 PALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEG---KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAP  310 (401)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCC---CEEEEEecCcceecccccccccCCCcCCCCceeCh
Confidence            357889999999999999999999999999999999999876   45566666522                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++||+++ |..|+....     ........+. ....+..+..++.++.+++.+||..+|+
T Consensus       311 E~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~-----~~~~~~~~~~-~~~~~~~p~~~~~~l~~li~~cl~~~P~  384 (401)
T cd05107         311 ESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP-----MNEQFYNAIK-RGYRMAKPAHASDEIYEIMQKCWEEKFE  384 (401)
T ss_pred             HHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC-----chHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence               11223567899999999999998 665543331     2222223222 3334456677899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.+++.
T Consensus       385 ~RPs~~ell~  394 (401)
T cd05107         385 IRPDFSQLVH  394 (401)
T ss_pred             HCcCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.92  E-value=7.7e-25  Score=151.33  Aligned_cols=133  Identities=16%  Similarity=0.208  Sum_probs=101.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++..++.++.|++.|+++||+++++|+||||+||+++.+   ..+++.||+.                         
T Consensus        95 ~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe  171 (256)
T cd05112          95 GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGEN---QVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPE  171 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCC---CeEEECCCcceeecccCcccccCCCccchhhcCHh
Confidence            457899999999999999999999999999999999999866   3445555541                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||+|+++|++++ |..|+...      ............. ....+...+.++.+++.+||..+|++
T Consensus       172 ~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~  244 (256)
T cd05112         172 VFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR------SNSEVVETINAGF-RLYKPRLASQSVYELMQHCWKERPED  244 (256)
T ss_pred             HhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC------CHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHHcccChhh
Confidence             122334567999999999999998 77555433      3344444443222 22345567899999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.++++.
T Consensus       245 Rp~~~~~l~~  254 (256)
T cd05112         245 RPSFSLLLHQ  254 (256)
T ss_pred             CCCHHHHHHh
Confidence            9999998853

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.92  E-value=5.5e-25  Score=153.11  Aligned_cols=132  Identities=18%  Similarity=0.272  Sum_probs=101.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +.+++.++..++.|++.||++||+.+++|+||||+||+++.+   ..++++||+.                         
T Consensus       101 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~  177 (267)
T cd05066         101 GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA  177 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCC---CeEEeCCCCcccccccccceeeecCCCccceeecC
Confidence            457899999999999999999999999999999999999876   4455555541                         


Q ss_pred             ---hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           58 ---RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        58 ---~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                         ..+..++.++|+||+|+++|++++ |..|+...      ...+....+... ...+.+..+++.+.+++.+|+..+|
T Consensus       178 pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p  250 (267)
T cd05066         178 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEM------SNQDVIKAIEEG-YRLPAPMDCPAALHQLMLDCWQKDR  250 (267)
T ss_pred             HhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccC------CHHHHHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCc
Confidence               112234567999999999999886 88666554      333343333322 2334456788999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       251 ~~Rp~~~~i~~  261 (267)
T cd05066         251 NERPKFEQIVS  261 (267)
T ss_pred             hhCCCHHHHHH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=7.1e-25  Score=153.73  Aligned_cols=138  Identities=17%  Similarity=0.235  Sum_probs=100.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+...                       
T Consensus       103 ~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  179 (284)
T cd05081         103 ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESE---NRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYA  179 (284)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCC---CeEEECCCcccccccCCCcceeecCCCCCceEeeC
Confidence            457899999999999999999999999999999999999876   455666665211                       


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCC----------CCChHHHHHHHHhcCCCCCCCCCCChhHHHH
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG----------LASRDDLLELIAFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (152)
                           +..++.++|+||+|+++|+++++..+.......-          ......+..... .....+.+..++.++.++
T Consensus       180 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l  258 (284)
T cd05081         180 PESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK-NNGRLPAPPGCPAEIYAI  258 (284)
T ss_pred             HHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh-cCCcCCCCCCCCHHHHHH
Confidence                 2234567999999999999999874443221100          000011111121 222334456788999999


Q ss_pred             HHHhhccccCCCcCHHHHhc
Q 039869          125 LSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~  144 (152)
                      +.+||..+|++|||+.+++.
T Consensus       259 i~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         259 MKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHccCChhhCCCHHHHHH
Confidence            99999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=5.1e-25  Score=153.31  Aligned_cols=134  Identities=21%  Similarity=0.237  Sum_probs=102.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ..+++..++.++.|++.||.+||. .+++|+||+|+||+++.+   +.++++||+..                       
T Consensus       108 ~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~  184 (269)
T cd08528         108 QRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED---DKVTITDFGLAKQKQPESKLTSVVGTILYSCPEI  184 (269)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC---CcEEEecccceeecccccccccccCcccCcChhh
Confidence            457899999999999999999996 789999999999999877   45666666621                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+|+++|++++|+.|+...      +.......+......+.....++.++.+++.+||..||++||
T Consensus       185 ~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  258 (269)
T cd08528         185 VKNEPYGEKADVWAFGCILYQMCTLQPPFYST------NMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARP  258 (269)
T ss_pred             hcCCCCchHHHHHHHHHHHHHHHhCCCccccc------CHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCC
Confidence             1223467899999999999999999666443      333333333333333333346789999999999999999999


Q ss_pred             CHHHHhcC
Q 039869          138 TAKHVLAH  145 (152)
Q Consensus       138 ~~~~~l~h  145 (152)
                      ++.++..+
T Consensus       259 ~~~e~~~~  266 (269)
T cd08528         259 DIIQVSAM  266 (269)
T ss_pred             CHHHHHHH
Confidence            99998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=5.7e-25  Score=154.34  Aligned_cols=137  Identities=20%  Similarity=0.292  Sum_probs=99.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++.++..++.|++.||+|||++|++||||||+||+++.+   +.++++||+..                         
T Consensus       105 ~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~ap  181 (284)
T cd05079         105 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAP  181 (284)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCC---CCEEECCCccccccccCccceeecCCCCCCccccCH
Confidence            57889999999999999999999999999999999999876   44566665521                         


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCC---------CCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHH
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGR---------GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLS  126 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  126 (152)
                         .+..++.++|+||+|+++|++++++.+.......         .............. ....+.+..++..+.+++.
T Consensus       182 E~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~  260 (284)
T cd05079         182 ECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE-GKRLPRPPNCPEEVYQLMR  260 (284)
T ss_pred             HHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHc-CccCCCCCCCCHHHHHHHH
Confidence               1223456799999999999999987544332110         00011112222221 2233445678999999999


Q ss_pred             HhhccccCCCcCHHHHhc
Q 039869          127 KCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       127 ~~l~~~p~~R~~~~~~l~  144 (152)
                      +||+.+|++||++.++++
T Consensus       261 ~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         261 KCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             HHccCCcccCcCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=8.7e-25  Score=152.88  Aligned_cols=135  Identities=16%  Similarity=0.187  Sum_probs=97.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCC----chhHHHHHHHHh-------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD----AHEAEISAFLQR-------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~----~~~~~l~~~~~~-------------------   58 (152)
                      ++++++..+..++.|++.||+|||+++++||||||+||+++..+.    ...+++.+|+..                   
T Consensus       111 ~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe  190 (274)
T cd05076         111 KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPE  190 (274)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCch
Confidence            356889999999999999999999999999999999999975321    122455555421                   


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHH-hcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMM-TAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||||+++|+++ +|..|+...      ...........   ....+...+..+.+++.+||..+|+
T Consensus       191 ~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~  261 (274)
T cd05076         191 CVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER------TPSEKERFYEK---KHRLPEPSCKELATLISQCLTYEPT  261 (274)
T ss_pred             hhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc------ChHHHHHHHHh---ccCCCCCCChHHHHHHHHHcccChh
Confidence               1123467899999999999995 577555443      22222222211   1223445667899999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       262 ~Rps~~~il~~  272 (274)
T cd05076         262 QRPSFRTILRD  272 (274)
T ss_pred             hCcCHHHHHHh
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.92  E-value=1.1e-24  Score=148.58  Aligned_cols=136  Identities=29%  Similarity=0.416  Sum_probs=106.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------hhc
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------RHG   60 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~~~   60 (152)
                      ++...+..++.+++.++.+||..+++|+||+|+||+++.+   +.+++.|++.                        ..+
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~  160 (244)
T smart00220       84 LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED---GHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLG  160 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC---CcEEEccccceeeeccccccccccCCcCCCCHHHHcc
Confidence            7889999999999999999999999999999999999877   5556666652                        112


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCC-CChhHHHHHHHhhccccCCCcCH
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      ...+.++|+||+|++++++++|..|+....     ..................... ++.++.+++.+|+..+|++||++
T Consensus       161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  235 (244)
T smart00220      161 KGYGKAVDVWSLGVILYELLTGKPPFPGDD-----QLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTA  235 (244)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCH
Confidence            334668999999999999999986664421     444444444433332222222 88999999999999999999999


Q ss_pred             HHHhcCCCC
Q 039869          140 KHVLAHPFP  148 (152)
Q Consensus       140 ~~~l~h~~~  148 (152)
                      .++++||||
T Consensus       236 ~~~~~~~~~  244 (244)
T smart00220      236 EEALQHPFF  244 (244)
T ss_pred             HHHhhCCCC
Confidence            999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.2e-24  Score=153.43  Aligned_cols=131  Identities=18%  Similarity=0.141  Sum_probs=97.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-------------------------   59 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-------------------------   59 (152)
                      +++..++.++.|++.||+|||+.+++|+||||+||+++.+   ..++++||+...                         
T Consensus       126 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  202 (295)
T cd05097         126 VSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH---YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWES  202 (295)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC---CcEEecccccccccccCcceeccCcCcCceeecChhh
Confidence            6788999999999999999999999999999999999876   456777766221                         


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhc--CcccCCccCCCCCChHHHHHHHHh------cCCCCCCCCCCChhHHHHHHHhh
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTA--EISAWGSFGRGLASRDDLLELIAF------SSEVPEFPSNISEDGRDFLSKCF  129 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ll~~~l  129 (152)
                        +..++.++|+||||+++|+++++  ..|+...      ...........      .......+...+..+.+++.+|+
T Consensus       203 ~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  276 (295)
T cd05097         203 ILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL------SDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCW  276 (295)
T ss_pred             hccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc------ChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHc
Confidence              12236789999999999999984  3333332      22332222110      11122345567899999999999


Q ss_pred             ccccCCCcCHHHHhc
Q 039869          130 IRVHQLRWTAKHVLA  144 (152)
Q Consensus       130 ~~~p~~R~~~~~~l~  144 (152)
                      ..+|++||++.++++
T Consensus       277 ~~~p~~RPs~~~i~~  291 (295)
T cd05097         277 SRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCchhCcCHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.92  E-value=1.3e-24  Score=150.67  Aligned_cols=131  Identities=19%  Similarity=0.298  Sum_probs=100.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..+..++.|++.||++||+.+++|+||+|+||+++..   ..++++||+..                         
T Consensus        98 ~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  174 (260)
T cd05073          98 KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA  174 (260)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC---CcEEECCCcceeeccCCCcccccCCcccccccCHhH
Confidence            46788999999999999999999999999999999999876   45666666521                         


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+|+++|++++ |..|+.+.      +.......... ....+.+...+.++.+++.+|+..+|++|
T Consensus       175 ~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  247 (260)
T cd05073         175 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM------SNPEVIRALER-GYRMPRPENCPEELYNIMMRCWKNRPEER  247 (260)
T ss_pred             hccCCcCccccchHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHhC-CCCCCCcccCCHHHHHHHHHHcccCcccC
Confidence             11223557999999999999998 77655443      33334443332 23334556788999999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       248 p~~~~l~~  255 (260)
T cd05073         248 PTFEYIQS  255 (260)
T ss_pred             cCHHHHHH
Confidence            99988753

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=5.1e-25  Score=154.12  Aligned_cols=137  Identities=20%  Similarity=0.256  Sum_probs=101.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.|++.||++||++|++|+||||+||+++.+   ..++++||+...                        
T Consensus       105 ~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~P  181 (284)
T cd05038         105 QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE---DLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAP  181 (284)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC---CCEEEcccccccccccCCcceeccCCCCCcccccCc
Confidence            47889999999999999999999999999999999999877   556666665221                        


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCC---------ChHHHHHHHHhcCCCCCCCCCCChhHHHHHH
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA---------SRDDLLELIAFSSEVPEFPSNISEDGRDFLS  126 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  126 (152)
                          +..++.++|+||+|+++|++++|..|+.........         ....+..... .......+..++.++.+++.
T Consensus       182 e~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~  260 (284)
T cd05038         182 ECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-EGERLPRPPSCPDEVYDLMK  260 (284)
T ss_pred             HHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH-cCCcCCCCccCCHHHHHHHH
Confidence                122356799999999999999999776543221100         0111222222 22233345667889999999


Q ss_pred             HhhccccCCCcCHHHHhc
Q 039869          127 KCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       127 ~~l~~~p~~R~~~~~~l~  144 (152)
                      +||..+|++||++.++++
T Consensus       261 ~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         261 LCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHhccChhhCCCHHHHHH
Confidence            999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.92  E-value=9.6e-25  Score=151.98  Aligned_cols=131  Identities=19%  Similarity=0.268  Sum_probs=95.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-------------------------   59 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-------------------------   59 (152)
                      +++..++.++.|++.||+|||+++++||||||+||+++.+   +.++++||+...                         
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  173 (269)
T cd05042          97 AQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD---LSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPEL  173 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC---CcEEEeccccccccccchheeccCCCCCcccccCHHH
Confidence            4577889999999999999999999999999999999877   455666665221                         


Q ss_pred             ---------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHhcC---CCCCCCCCCChhHHHHHH
Q 039869           60 ---------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAFSS---EVPEFPSNISEDGRDFLS  126 (152)
Q Consensus        60 ---------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~ll~  126 (152)
                               +..++.++|+||+||++|+++++..+++...     ...+.... .....   ..+..+..++....+++.
T Consensus       174 ~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (269)
T cd05042         174 VEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL-----SDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQ  248 (269)
T ss_pred             HhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC-----CHHHHHHHHhhccCccCCCCcccccCCHHHHHHHH
Confidence                     1123557999999999999999433444332     22222222 22111   123345568888999999


Q ss_pred             HhhccccCCCcCHHHHhc
Q 039869          127 KCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       127 ~~l~~~p~~R~~~~~~l~  144 (152)
                      .|+ .||++||++.++++
T Consensus       249 ~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         249 FCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHh-cCcccccCHHHHHH
Confidence            998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=1.1e-24  Score=150.56  Aligned_cols=133  Identities=15%  Similarity=0.189  Sum_probs=96.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC----CchhHHHHHHHHh---------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK----DAHEAEISAFLQR---------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~----~~~~~~l~~~~~~---------------------   58 (152)
                      .+++..+..++.|++.||+|||+++++|+||||+||+++..+    ....++++||+..                     
T Consensus        97 ~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~  176 (259)
T cd05037          97 NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECI  176 (259)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhh
Confidence            588899999999999999999999999999999999998663    1224566666521                     


Q ss_pred             hcC--CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGL--LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~--~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+.  .++.++|+||+|+++|+++++..+++...     .............   ..+......+.+++.+||..+|++|
T Consensus       177 ~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R  248 (259)
T cd05037         177 RNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL-----SSSEKERFYQDQH---RLPMPDCAELANLINQCWTYDPTKR  248 (259)
T ss_pred             cCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC-----CchhHHHHHhcCC---CCCCCCchHHHHHHHHHhccChhhC
Confidence            111  35667999999999999999643443332     1222222222111   1222334789999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       249 pt~~~il~  256 (259)
T cd05037         249 PSFRAILR  256 (259)
T ss_pred             CCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.92  E-value=2e-24  Score=149.08  Aligned_cols=130  Identities=21%  Similarity=0.309  Sum_probs=103.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh--------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR--------------------------   58 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~--------------------------   58 (152)
                      +++.++..++.|++.||++||+.+++|+||+|+||+++.+   +.++++||+..                          
T Consensus       100 ~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~  176 (258)
T smart00219      100 LSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGEN---LVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESL  176 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccC---CeEEEcccCCceecccccccccccCCCcccccChHHh
Confidence            8899999999999999999999999999999999999877   45566665521                          


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..++.++|+||+|+++|++++ |..|+...      ......+...... ....+..++.++.+++.+|+..+|++||
T Consensus       177 ~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  249 (258)
T smart00219      177 KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM------SNEEVLEYLKKGY-RLPKPENCPPEIYKLMLQCWAEDPEDRP  249 (258)
T ss_pred             ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhcCC-CCCCCCcCCHHHHHHHHHHCcCChhhCc
Confidence            12334678999999999999998 55444332      4455555554433 3455667899999999999999999999


Q ss_pred             CHHHHhc
Q 039869          138 TAKHVLA  144 (152)
Q Consensus       138 ~~~~~l~  144 (152)
                      ++.++++
T Consensus       250 t~~~ll~  256 (258)
T smart00219      250 TFSELVE  256 (258)
T ss_pred             CHHHHHh
Confidence            9999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=5.6e-25  Score=156.76  Aligned_cols=138  Identities=22%  Similarity=0.296  Sum_probs=119.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------H
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------Q   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------~   57 (152)
                      ++|.+..+..||.+|+.||-|||++||++||||.+|++++.+   +.++|.|||                         .
T Consensus       445 GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~e---GHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEI  521 (683)
T KOG0696|consen  445 GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEI  521 (683)
T ss_pred             cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccC---CceEeeecccccccccCCcceeeecCCCcccccce
Confidence            468899999999999999999999999999999999999999   788899987                         2


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ....+|..++|-||+||+||||+.|++||.+.      +.+++.+.+....  ..+|..+|.++.++....|...|.+|.
T Consensus       522 i~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe------DE~elF~aI~ehn--vsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  522 IAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE------DEDELFQAIMEHN--VSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             EEecccccchhHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHHcc--CcCcccccHHHHHHHHHHhhcCCcccc
Confidence            23445678899999999999999999888887      7788887776433  357889999999999999999999997


Q ss_pred             CH-----HHHhcCCCCCCC
Q 039869          138 TA-----KHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~-----~~~l~h~~~~~~  151 (152)
                      .+     .++-+||||+.-
T Consensus       594 Gcg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  594 GCGPEGERDIREHPFFRRI  612 (683)
T ss_pred             CCCCccccchhhCcchhhc
Confidence            53     468999999853

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.92  E-value=3.4e-24  Score=149.30  Aligned_cols=132  Identities=20%  Similarity=0.286  Sum_probs=95.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..++.++.||+.||+|||+.+++|+||||+||+++.+   +.++++|||...                        
T Consensus        95 ~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  171 (268)
T cd05086          95 NSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD---LTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPE  171 (268)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC---ccEEecccccccccCcchhhhcccCCcCcccccCch
Confidence            35667888999999999999999999999999999999876   456666665211                        


Q ss_pred             ----------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC----CCCCCCCCCChhHHHHH
Q 039869           60 ----------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS----EVPEFPSNISEDGRDFL  125 (152)
Q Consensus        60 ----------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ll  125 (152)
                                +..++.++|+||||+++|+++++..+++...     ...+....+....    ..+..+..+++.+.+++
T Consensus       172 ~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  246 (268)
T cd05086         172 LVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL-----SDREVLNHVIKDQQVKLFKPQLELPYSERWYEVL  246 (268)
T ss_pred             hcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhhcccccCCCccCCCCcHHHHHHH
Confidence                      0112457999999999999997644444332     3333333221111    22344556888999999


Q ss_pred             HHhhccccCCCcCHHHHhc
Q 039869          126 SKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~~~l~  144 (152)
                      .+|+ .+|++||++.++++
T Consensus       247 ~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         247 QFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHh-hCcccCCCHHHHHH
Confidence            9999 67999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.91  E-value=7.3e-26  Score=152.95  Aligned_cols=142  Identities=20%  Similarity=0.234  Sum_probs=109.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ..++|..+-.|+.-.+.||.||.+ .+|+|||+||+|||++..   +.+++.|||.                        
T Consensus       162 ~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~---G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPER  238 (361)
T KOG1006|consen  162 SRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRH---GDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPER  238 (361)
T ss_pred             ccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecC---CCEeeecccchHhHHHHHHhhhccCCccccChhc
Confidence            357888888999999999999995 599999999999999998   6666666661                        


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC-CC---CCCChhHHHHHHHhhcc
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE-FP---SNISEDGRDFLSKCFIR  131 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~ll~~~l~~  131 (152)
                        ..+..++.++|+||||+.|||++||+.|+..=.     +..+....+..+..+.- .+   ..++..+..++..||..
T Consensus       239 i~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K  313 (361)
T KOG1006|consen  239 IDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK  313 (361)
T ss_pred             cCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence              123346788999999999999999996664432     23333444444443321 22   33788999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSVDE  152 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~~~  152 (152)
                      |-+.||.+.+++++||.+.++
T Consensus       314 d~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  314 DRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             ccccCcchhhhhcCchhhhhh
Confidence            999999999999999998653

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=7e-25  Score=152.20  Aligned_cols=138  Identities=26%  Similarity=0.399  Sum_probs=117.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------HhhcCC-------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------QRHGLL-------   62 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------~~~~~~-------   62 (152)
                      +.|++..++.|..+|+.||.|||+++|++||+|.+|++++..   +.++++|||             ++.|++       
T Consensus       263 r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkD---GHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEV  339 (516)
T KOG0690|consen  263 RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKD---GHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEV  339 (516)
T ss_pred             hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccC---CceEeeecccchhcccccceeccccCChhhcCchh
Confidence            458999999999999999999999999999999999999988   888999998             223333       


Q ss_pred             -----CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           63 -----LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        63 -----~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                           |..++|-|.+||++|||++|+.||+..      +...+.+.+....  ..+|..+++++..++..+|..||.+|.
T Consensus       340 leDnDYgraVDWWG~GVVMYEMmCGRLPFyn~------dh~kLFeLIl~ed--~kFPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  340 LEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK------DHEKLFELILMED--LKFPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             hccccccceeehhhhhHHHHHHHhccCccccc------chhHHHHHHHhhh--ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence                 467899999999999999999999887      5556665554322  357889999999999999999999997


Q ss_pred             -----CHHHHhcCCCCCCC
Q 039869          138 -----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 -----~~~~~l~h~~~~~~  151 (152)
                           .+.++.+|+||..-
T Consensus       412 GgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  412 GGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             CCCchhHHHHHhhhhhccC
Confidence                 47789999999763

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=3.2e-24  Score=144.35  Aligned_cols=146  Identities=21%  Similarity=0.246  Sum_probs=106.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG----------------------   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~----------------------   60 (152)
                      .+|+..++..++.+++.||.|+|++.|+|||+|++|+||+..   +.++++|||..+.                      
T Consensus       119 vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d---gilklADFGlar~fs~~~n~~kprytnrvvTLwYr  195 (376)
T KOG0669|consen  119 VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD---GILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYR  195 (376)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC---ceEEeeccccccceecccccCCCCcccceeeeecC
Confidence            468899999999999999999999999999999999999987   7889999983311                      


Q ss_pred             --------CCCCcchhHHHHHHHHHHHHhcCcccCCccC---------------CCC---CChHHHHHHHHhcCCCC---
Q 039869           61 --------LLLIYHVDTWALGRVFVEMMTAEISAWGSFG---------------RGL---ASRDDLLELIAFSSEVP---  111 (152)
Q Consensus        61 --------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~---------------~~~---~~~~~~~~~~~~~~~~~---  111 (152)
                              ..+..+.|+|.-||++.||+++.+.+.+...               .+.   .+...+.+.++......   
T Consensus       196 ppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~  275 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQK  275 (376)
T ss_pred             CHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchh
Confidence                    1135679999999999999999855544321               000   01111111111100000   


Q ss_pred             ------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          112 ------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       112 ------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                            ..|..-.++..+++.++|..||.+|+++.+++.|.||..+
T Consensus       276 rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  276 RKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             hhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence                  0011124478999999999999999999999999999765

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.91  E-value=2.2e-25  Score=153.46  Aligned_cols=141  Identities=26%  Similarity=0.360  Sum_probs=111.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------HhhcCC------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------QRHGLL------   62 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------~~~~~~------   62 (152)
                      +++|+++++..+.+.-++||+|||..+-+|||||..|||++..   +..+++|||             +.-|++      
T Consensus       123 ~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~---G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE  199 (502)
T KOG0574|consen  123 RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD---GIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE  199 (502)
T ss_pred             cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc---chhhhhhccccchhhhhHHhhCccccCcccccHH
Confidence            5789999999999999999999999999999999999999988   788999998             122222      


Q ss_pred             ------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           63 ------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        63 ------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                            |....|+||||+...||+.|++ ++....    .++.+...-.........|..++.++-+|++.||..+|++|
T Consensus       200 VI~EIGY~~~ADIWSLGITaIEMAEG~P-PYsDIH----PMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R  274 (502)
T KOG0574|consen  200 VIEEIGYDTKADIWSLGITAIEMAEGRP-PYSDIH----PMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEER  274 (502)
T ss_pred             HHHHhccchhhhHhhhcchhhhhhcCCC-Cccccc----ccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHH
Confidence                  4678999999999999999994 444321    22222211111111123467799999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      -|+.++++|||+++
T Consensus       275 ~TA~~L~~H~Fikn  288 (502)
T KOG0574|consen  275 KTALRLCEHTFIKN  288 (502)
T ss_pred             HHHHHHhhhhhhcC
Confidence            99999999999875

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.9e-24  Score=166.98  Aligned_cols=133  Identities=18%  Similarity=0.285  Sum_probs=113.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..++..+...++.+|++|..||+++++|||||...|+|++..   +.+|++|||..                        
T Consensus       797 ~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~---r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~P  873 (1025)
T KOG1095|consen  797 SNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER---RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPP  873 (1025)
T ss_pred             CCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc---CcEEEcccchhHhhhhchheeccCccccceecCCH
Confidence            457889999999999999999999999999999999999988   88999999832                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         ....++.++|||||||++||+++...+||+..     +..++...+..+. +.+.|..+++.+.+++..||..+|++
T Consensus       874 Esl~d~iFtskSDvWsFGVllWEifslG~~PY~~~-----~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~  947 (1025)
T KOG1095|consen  874 ESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR-----SNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPED  947 (1025)
T ss_pred             HHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc-----chHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhh
Confidence               22335789999999999999999766777665     6666666444444 66778999999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++..+++
T Consensus       948 RP~F~~i~~  956 (1025)
T KOG1095|consen  948 RPSFRTIVE  956 (1025)
T ss_pred             CccHHHHHh
Confidence            999998875

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-25  Score=164.09  Aligned_cols=145  Identities=21%  Similarity=0.299  Sum_probs=120.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      .++|++...+.+..||+.||.|||.++|+|+||||+|+|+.+....-.+++.|||.                        
T Consensus       658 kgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEV  737 (888)
T KOG4236|consen  658 KGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEV  737 (888)
T ss_pred             cccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHH
Confidence            46799999999999999999999999999999999999999888888899999982                        


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .....|.++.||||+|+++|--++|-.||....     +..+..++..+- +++.-+..+++++.+||..+|+.+-.+|.
T Consensus       738 LrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE-----dIndQIQNAaFM-yPp~PW~eis~~AidlIn~LLqVkm~kRy  811 (888)
T KOG4236|consen  738 LRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE-----DINDQIQNAAFM-YPPNPWSEISPEAIDLINNLLQVKMRKRY  811 (888)
T ss_pred             HhhccccccccceeeeEEEEEEecccccCCCcc-----chhHHhhccccc-cCCCchhhcCHHHHHHHHHHHHHHHHHhc
Confidence            233445788999999999999999987775432     334444444432 24445678999999999999999999999


Q ss_pred             CHHHHhcCCCCCCCC
Q 039869          138 TAKHVLAHPFPSVDE  152 (152)
Q Consensus       138 ~~~~~l~h~~~~~~~  152 (152)
                      +..+.+.|||+|+++
T Consensus       812 svdk~lsh~Wlq~yq  826 (888)
T KOG4236|consen  812 SVDKSLSHPWLQDYQ  826 (888)
T ss_pred             chHhhccchhhhcch
Confidence            999999999999863

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.90  E-value=1.7e-23  Score=145.80  Aligned_cols=131  Identities=20%  Similarity=0.281  Sum_probs=94.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..++.++.|++.|++|||+++++|+||||+||+++.+   ..++++||+...                        
T Consensus        96 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  172 (269)
T cd05087          96 TPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTAD---LTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPE  172 (269)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC---CcEEECCccccccccCcceeecCCCcCCcccccCHh
Confidence            34567888999999999999999999999999999999876   556677765221                        


Q ss_pred             ----------cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHH-HHhcC---CCCCCCCCCChhHHHH
Q 039869           60 ----------GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLEL-IAFSS---EVPEFPSNISEDGRDF  124 (152)
Q Consensus        60 ----------~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~l  124 (152)
                                ...++.++|+||+|+++|++++ |..|+...      ...+.... +....   ..+......+..+.++
T Consensus       173 ~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (269)
T cd05087         173 LVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL------SDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEV  246 (269)
T ss_pred             HhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC------ChHHHHHHHhhcccCCCCCCccCCCCChHHHHH
Confidence                      0112467999999999999996 88666433      22222222 21111   1223334567889999


Q ss_pred             HHHhhccccCCCcCHHHHhc
Q 039869          125 LSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~  144 (152)
                      +.+|+ .+|++||++.+++.
T Consensus       247 ~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         247 MQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHh-cCcccCCCHHHHHH
Confidence            99998 68999999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.90  E-value=2.1e-23  Score=155.68  Aligned_cols=144  Identities=18%  Similarity=0.202  Sum_probs=99.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc---------------CCC------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------LLL------   63 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~---------------~~~------   63 (152)
                      +++..++.++.|++.+|.|||..+++||||||+||+++.+   ..++++|||....               ..|      
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l  382 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVD---GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL  382 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCC---CcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence            4677899999999999999999999999999999999876   4566666652210               000      


Q ss_pred             ---------------------------CcchhHHHHHHHHHHHHhcCcccCCcc-CCCC-----CChHHHHHHHHhcCCC
Q 039869           64 ---------------------------IYHVDTWALGRVFVEMMTAEISAWGSF-GRGL-----ASRDDLLELIAFSSEV  110 (152)
Q Consensus        64 ---------------------------~~~~DvwslG~~l~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~  110 (152)
                                                 ..+.|+||+||++|+|+++..+++... ....     .......+........
T Consensus       383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~  462 (507)
T PLN03224        383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD  462 (507)
T ss_pred             cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence                                       123699999999999999875333211 0000     0011111111111212


Q ss_pred             CCCCCCCChhHHHHHHHhhcccc---CCCcCHHHHhcCCCCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVH---QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p---~~R~~~~~~l~h~~~~~~  151 (152)
                      .......++...+++.++|..+|   .+|+++.++|+||||..+
T Consensus       463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence            22334578889999999999866   689999999999999865

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.90  E-value=1.3e-24  Score=164.67  Aligned_cols=138  Identities=25%  Similarity=0.269  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC--CchhHHHHHHHHhh--------------------------
Q 039869            8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK--DAHEAEISAFLQRH--------------------------   59 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~--~~~~~~l~~~~~~~--------------------------   59 (152)
                      .....+..|++.||++||+.+|+||||||.||||....  ....++|+|||...                          
T Consensus       606 i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~  685 (903)
T KOG1027|consen  606 IDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ  685 (903)
T ss_pred             ccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHH
Confidence            34578889999999999999999999999999998642  22355788887221                          


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC-CCCCCCChhHHHHHHHhhccccCCC
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        ...-..++||+|+||++|..++|..-+++..      ..+. .++..+.... .+......++.+||.+|++++|..|
T Consensus       686 L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~------~~R~-~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~R  758 (903)
T KOG1027|consen  686 LREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS------LERQ-ANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLR  758 (903)
T ss_pred             HhccccCcccchhhcCceEEEEecCCccCCCch------HHhh-hhhhcCccceeeeccCchHHHHHHHHHhcCCCcccC
Confidence              1111456899999999999999865666642      1111 1121111111 1111111288999999999999999


Q ss_pred             cCHHHHhcCCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVDE  152 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~~  152 (152)
                      |++.++|.||+|...|
T Consensus       759 Psa~~VL~HPlFW~~e  774 (903)
T KOG1027|consen  759 PSATDVLNHPLFWDSE  774 (903)
T ss_pred             CCHHHHhCCCccCChH
Confidence            9999999999998653

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.7e-23  Score=145.14  Aligned_cols=144  Identities=23%  Similarity=0.308  Sum_probs=115.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------H
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------Q   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------~   57 (152)
                      ++++++.++.|..+|..||.|||++||++||+|.+|+|++.+   +.++++|+|                         .
T Consensus       346 rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae---ghikltdygmcke~l~~gd~tstfcgtpnyiapei  422 (593)
T KOG0695|consen  346 RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE---GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEI  422 (593)
T ss_pred             hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC---CceeecccchhhcCCCCCcccccccCCCcccchhh
Confidence            568999999999999999999999999999999999999998   777888876                         3


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccC--CccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAW--GSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                      .+|-.|..++|-|++|++++||+.|+.||.  +... ...+.++...++... ....+|..++.....+++..|+.||.+
T Consensus       423 lrgeeygfsvdwwalgvlmfemmagrspfdivgm~n-~d~ntedylfqvile-kqiriprslsvkas~vlkgflnkdp~e  500 (593)
T KOG0695|consen  423 LRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN-PDMNTEDYLFQVILE-KQIRIPRSLSVKASHVLKGFLNKDPKE  500 (593)
T ss_pred             hcccccCceehHHHHHHHHHHHHcCCCCcceecCCC-cccchhHHHHHHHhh-hcccccceeehhhHHHHHHhhcCCcHH
Confidence            445556788999999999999999998884  2211 112333343333332 244578899999999999999999999


Q ss_pred             Cc------CHHHHhcCCCCCCC
Q 039869          136 RW------TAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~------~~~~~l~h~~~~~~  151 (152)
                      |.      .+.++..|+||+.-
T Consensus       501 rlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  501 RLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             hcCCCcccchhhhhcchhhhhC
Confidence            97      36689999999853

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.89  E-value=2.7e-23  Score=162.50  Aligned_cols=131  Identities=18%  Similarity=0.113  Sum_probs=93.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      +++...+..++.||+.||+|||+.|++||||||+||+++.+   +.++++|||..                         
T Consensus       109 ~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d---g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~  185 (932)
T PRK13184        109 KTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLF---GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSM  185 (932)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCC---CCEEEEecCcceeccccccccccccccccccccccc
Confidence            34567789999999999999999999999999999999876   34445555421                         


Q ss_pred             ------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-CCCCCCCCCh
Q 039869           59 ------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-VPEFPSNISE  119 (152)
Q Consensus        59 ------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  119 (152)
                                        .+..++.++|+||+||++|++++|..|+....      ............. .......++.
T Consensus       186 t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~------~~ki~~~~~i~~P~~~~p~~~iP~  259 (932)
T PRK13184        186 TIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK------GRKISYRDVILSPIEVAPYREIPP  259 (932)
T ss_pred             ccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc------hhhhhhhhhccChhhccccccCCH
Confidence                              12234678999999999999999997775532      1211111110110 0111246788


Q ss_pred             hHHHHHHHhhccccCCCcCHHHHh
Q 039869          120 DGRDFLSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       120 ~~~~ll~~~l~~~p~~R~~~~~~l  143 (152)
                      .+.+++.+|+..||++|++..+.+
T Consensus       260 ~L~~LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        260 FLSQIAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHH
Confidence            999999999999999998765543

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3e-23  Score=141.29  Aligned_cols=148  Identities=20%  Similarity=0.292  Sum_probs=107.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------
Q 039869            1 SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------   57 (152)
Q Consensus         1 ~~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------   57 (152)
                      |-++++.+.++...+||+.||.|||+.+|.||||||.|+++++|   -.++|.|||.                       
T Consensus       149 SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSN---CvLKICDFGLARvee~d~~~hMTqEVVTQYYRA  225 (449)
T KOG0664|consen  149 SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSN---CILKICDFGLARTWDQRDRLNMTHEVVTQYYRA  225 (449)
T ss_pred             cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccC---ceEEecccccccccchhhhhhhHHHHHHHHhcc
Confidence            34678899999999999999999999999999999999999988   6678888871                       


Q ss_pred             ----hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----------CChHHHH-------HHHH-hcCCCCCCC-
Q 039869           58 ----RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----------ASRDDLL-------ELIA-FSSEVPEFP-  114 (152)
Q Consensus        58 ----~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~-------~~~~-~~~~~~~~~-  114 (152)
                          .....|+..+||||+||++.|++-.+..|....+-..          ...+...       ..+. .....|..+ 
T Consensus       226 PEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~v  305 (449)
T KOG0664|consen  226 PELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQR  305 (449)
T ss_pred             HHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccc
Confidence                2233468899999999999999998877754421100          0111110       0011 111122221 


Q ss_pred             -------CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          115 -------SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       115 -------~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                             ..-..+...++..++..||++|.+..+++.|+|..+.
T Consensus       306 LYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  306 LYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             eeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence                   2234457888999999999999999999999998653

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.89  E-value=1.5e-22  Score=143.38  Aligned_cols=135  Identities=13%  Similarity=0.232  Sum_probs=108.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCc------------------------hhHHHHHHHHh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA------------------------HEAEISAFLQR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~------------------------~~~~l~~~~~~   58 (152)
                      +.++-.++..++.|++.|++|||+.|++|.||...|++|++.-++                        +.++....+..
T Consensus       391 qtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal  470 (563)
T KOG1024|consen  391 QTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEAL  470 (563)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHH
Confidence            346778999999999999999999999999999999999765221                        22333333355


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      ....++.++|+||||+++||+++-...|+...     ++.+...++..+. +...|.+++++++.++.-||...|++||+
T Consensus       471 ~n~~yssasDvWsfGVllWELmtlg~~PyaeI-----DPfEm~~ylkdGy-RlaQP~NCPDeLf~vMacCWallpeeRPs  544 (563)
T KOG1024|consen  471 QNSHYSSASDVWSFGVLLWELMTLGKLPYAEI-----DPFEMEHYLKDGY-RLAQPFNCPDELFTVMACCWALLPEERPS  544 (563)
T ss_pred             hhhhhcchhhhHHHHHHHHHHHhcCCCCcccc-----CHHHHHHHHhccc-eecCCCCCcHHHHHHHHHHHhcCcccCCC
Confidence            55667899999999999999999544555443     7788887777554 56678999999999999999999999999


Q ss_pred             HHHHh
Q 039869          139 AKHVL  143 (152)
Q Consensus       139 ~~~~l  143 (152)
                      ++|+.
T Consensus       545 f~Qlv  549 (563)
T KOG1024|consen  545 FSQLV  549 (563)
T ss_pred             HHHHH
Confidence            99976

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.88  E-value=1e-23  Score=155.31  Aligned_cols=138  Identities=21%  Similarity=0.287  Sum_probs=113.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++...+..++.++.|++.+++|+|+++|+|||||.+|++++.+   ..++|+|||..                       
T Consensus       149 ~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~---mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl  225 (596)
T KOG0586|consen  149 HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN---MNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPEL  225 (596)
T ss_pred             cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc---cceeeeccccceeecccccccccCCCCCccChHh
Confidence            3456778999999999999999999999999999999999988   77899999822                       


Q ss_pred             -hcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .|..+ ...+|+||+|+++|.++.|..||.+..      ..++...+..+..  .+|..++.+..++|+++|..+|.+|
T Consensus       226 ~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~------lk~Lr~rvl~gk~--rIp~~ms~dce~lLrk~lvl~Pskr  297 (596)
T KOG0586|consen  226 FNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN------LKELRPRVLRGKY--RIPFYMSCDCEDLLRKFLVLNPSKR  297 (596)
T ss_pred             hcCcccCCcceehhhhhhhheeeeecccccCCcc------cccccchheeeee--cccceeechhHHHHHHhhccCcccc
Confidence             22222 356999999999999999999998874      3333333333333  3456788999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      +++.++.+|.|.-.
T Consensus       298 ~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  298 GPCDQIMKDRWRND  311 (596)
T ss_pred             CCHHHhhhhcccch
Confidence            99999999999753

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.88  E-value=2.3e-23  Score=152.71  Aligned_cols=131  Identities=22%  Similarity=0.315  Sum_probs=112.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .++..+...++.+.+.||+|||.++++||||..+|||++.+   ..++++|||...                        
T Consensus       258 ~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~---~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl  334 (474)
T KOG0194|consen  258 SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKK---GVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETL  334 (474)
T ss_pred             CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCC---CeEEeCccccccCCcceeeccccccCcceecChhhh
Confidence            48899999999999999999999999999999999999887   568999998322                        


Q ss_pred             -cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 -GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 -~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       ...++.++|||||||++||+.+ |..|+.+.      ...++...+.....+...+...+.+...++.+|+..+|+.||
T Consensus       335 ~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~------~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~  408 (474)
T KOG0194|consen  335 NTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM------KNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRP  408 (474)
T ss_pred             ccCccccccchhheeeeEEeeeccCCCCCCCC------CHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhcc
Confidence             2235789999999999999998 56666665      677888888666666677788999999999999999999999


Q ss_pred             CHHHHh
Q 039869          138 TAKHVL  143 (152)
Q Consensus       138 ~~~~~l  143 (152)
                      ++.++.
T Consensus       409 tm~~i~  414 (474)
T KOG0194|consen  409 TMSTIK  414 (474)
T ss_pred             CHHHHH
Confidence            998864

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=2.5e-22  Score=153.64  Aligned_cols=132  Identities=20%  Similarity=0.337  Sum_probs=109.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .++..+...++.||+.|++||++.+++||||...|||+..+   +.++++|||..+                        
T Consensus       414 ~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~---~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmAp  490 (609)
T KOG0200|consen  414 ALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN---KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAP  490 (609)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC---CEEEEccccceeccCCCCceEecCCCCccceeecCH
Confidence            48889999999999999999999999999999999999988   888999998332                        


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                          ...++.++||||+|++|||+++...+|+....    ...++.+.+. .....+.|..++.++.++++.||+.+|++
T Consensus       491 Esl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~----~~~~l~~~l~-~G~r~~~P~~c~~eiY~iM~~CW~~~p~~  565 (609)
T KOG0200|consen  491 ESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP----PTEELLEFLK-EGNRMEQPEHCSDEIYDLMKSCWNADPED  565 (609)
T ss_pred             HHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC----cHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHhCCCccc
Confidence                12347789999999999999996655555421    3556655444 34456778899999999999999999999


Q ss_pred             CcCHHHHh
Q 039869          136 RWTAKHVL  143 (152)
Q Consensus       136 R~~~~~~l  143 (152)
                      ||++.++.
T Consensus       566 RP~F~~~~  573 (609)
T KOG0200|consen  566 RPTFSECV  573 (609)
T ss_pred             CCCHHHHH
Confidence            99999865

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=6.1e-23  Score=152.67  Aligned_cols=139  Identities=20%  Similarity=0.264  Sum_probs=107.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCC-------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL-------------------   63 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~-------------------   63 (152)
                      +-|.|..++.|+.++.+|+++.|..|+|||||||+|||||..   +.++++|||...|+.+                   
T Consensus       724 gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd---GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSme  800 (1034)
T KOG0608|consen  724 GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD---GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSME  800 (1034)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccC---CceeeeeccccccceeccccccccCCCccccccCC
Confidence            458899999999999999999999999999999999999998   8999999983333332                   


Q ss_pred             ------------------------------------------------CcchhHHHHHHHHHHHHhcCcccCCccCCCCC
Q 039869           64 ------------------------------------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA   95 (152)
Q Consensus        64 ------------------------------------------------~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~   95 (152)
                                                                      +...|-||.|||||||+.|+.||....+... 
T Consensus       801 p~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~t-  879 (1034)
T KOG0608|consen  801 PSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGET-  879 (1034)
T ss_pred             CchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcc-
Confidence                                                            4568999999999999999988877754322 


Q ss_pred             ChHHHHHHHHhcCC--CCCCCCCCChhHHHHHHHhhccccCCCc---CHHHHhcCCCCCCC
Q 039869           96 SRDDLLELIAFSSE--VPEFPSNISEDGRDFLSKCFIRVHQLRW---TAKHVLAHPFPSVD  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~l~~~p~~R~---~~~~~l~h~~~~~~  151 (152)
                           ..++...+.  ....+.+++.+..++|.++. .+++.|.   ...++..||||+.-
T Consensus       880 -----q~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  880 -----QYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             -----eeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCcccccc
Confidence                 111111111  22345679999999998744 4567776   45679999999863

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=1.6e-22  Score=151.62  Aligned_cols=133  Identities=23%  Similarity=0.237  Sum_probs=113.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..|-......|+.||++|++||..+++|||||...|+++...   +.+||+|||..                        
T Consensus       207 ~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasp---rtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCa  283 (1039)
T KOG0199|consen  207 AILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASP---RTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCA  283 (1039)
T ss_pred             cceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheeccc---ceeeeecccceeccCCCCcceEecCCCcCcccccC
Confidence            346678889999999999999999999999999999999877   88999999832                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCc-ccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEI-SAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          ....++.++|+|++||.+|||+++.. |+.+.      ....+++++. .....+.|..++++..+++..||..+|
T Consensus       284 PEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~------~g~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~p  356 (1039)
T KOG0199|consen  284 PESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC------RGIQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNP  356 (1039)
T ss_pred             HhHhccccccccchhhhhhhhHHhhhccCCCCCCCC------CHHHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCc
Confidence                23335889999999999999999654 44444      7788888888 566677889999999999999999999


Q ss_pred             CCCcCHHHHhcC
Q 039869          134 QLRWTAKHVLAH  145 (152)
Q Consensus       134 ~~R~~~~~~l~h  145 (152)
                      ++||++..+.+.
T Consensus       357 aDRptFsair~~  368 (1039)
T KOG0199|consen  357 ADRPTFSAIRED  368 (1039)
T ss_pred             cccccHHHHHHh
Confidence            999999988543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.1e-21  Score=141.76  Aligned_cols=39  Identities=36%  Similarity=0.746  Sum_probs=36.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCeee
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLL   41 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh-~~~i~h~dlk~~Nil~   41 (152)
                      +.++...++.|++||+.||.||| ++||||.||||+|||+
T Consensus       182 rGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  182 RGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence            56889999999999999999999 5699999999999998

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.8e-22  Score=148.47  Aligned_cols=129  Identities=16%  Similarity=0.222  Sum_probs=105.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------c-------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------G-------------   60 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------~-------------   60 (152)
                      ++.-..+.++-||..|+.||..+++|||||...|+|+.++   ..++++|||..+           |             
T Consensus       362 v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEn---hiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsL  438 (1157)
T KOG4278|consen  362 VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---HIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL  438 (1157)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccc---ceEEeeccchhhhhcCCceecccCccCcccccCcccc
Confidence            4566788999999999999999999999999999999998   889999998321           1             


Q ss_pred             --CCCCcchhHHHHHHHHHHHHhc-CcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           61 --LLLIYHVDTWALGRVFVEMMTA-EISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        61 --~~~~~~~DvwslG~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                        ..++.++|||+|||+|||++|- ..|+.+.      +...+...+..+ +.-+-|..|++.+.+|++.||++.|..||
T Consensus       439 AyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi------dlSqVY~LLEkg-yRM~~PeGCPpkVYeLMraCW~WsPsDRP  511 (1157)
T KOG4278|consen  439 AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYGLLEKG-YRMDGPEGCPPKVYELMRACWNWSPSDRP  511 (1157)
T ss_pred             cccccccchhhHHHHHHHHHHHhcCCCCCCCc------cHHHHHHHHhcc-ccccCCCCCCHHHHHHHHHHhcCCcccCc
Confidence              1136789999999999999985 4455454      555565555543 34567889999999999999999999999


Q ss_pred             CHHHHh
Q 039869          138 TAKHVL  143 (152)
Q Consensus       138 ~~~~~l  143 (152)
                      ++.++.
T Consensus       512 sFaeiH  517 (1157)
T KOG4278|consen  512 SFAEIH  517 (1157)
T ss_pred             cHHHHH
Confidence            998764

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.87  E-value=2.1e-22  Score=149.57  Aligned_cols=131  Identities=21%  Similarity=0.272  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCC--------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL--------------------   62 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~--------------------   62 (152)
                      .-|+......|+.||..+|+|||+.++|||||...|||+.+.   ..++++|||..+...                    
T Consensus       486 ~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp---~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPE  562 (974)
T KOG4257|consen  486 DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSP---QCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPE  562 (974)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCc---ceeeecccchhhhccccchhhccccccceeecCcc
Confidence            447788899999999999999999999999999999999988   889999999432211                    


Q ss_pred             ------CCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           63 ------LIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        63 ------~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                            ++.++|||-|||++||++. |..||.+-.      ..++.-.++. ....+.|.++++.+..++.+||.++|.+
T Consensus       563 SINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk------NsDVI~~iEn-GeRlP~P~nCPp~LYslmskcWayeP~k  635 (974)
T KOG4257|consen  563 SINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK------NSDVIGHIEN-GERLPCPPNCPPALYSLMSKCWAYEPSK  635 (974)
T ss_pred             ccchhcccchhhHHHHHHHHHHHHHhcCCcccccc------ccceEEEecC-CCCCCCCCCCChHHHHHHHHHhccCccc
Confidence                  2678999999999999966 777887763      2233333333 3456688999999999999999999999


Q ss_pred             CcCHHHHh
Q 039869          136 RWTAKHVL  143 (152)
Q Consensus       136 R~~~~~~l  143 (152)
                      ||.+.++.
T Consensus       636 RPrftei~  643 (974)
T KOG4257|consen  636 RPRFTEIK  643 (974)
T ss_pred             CCcHHHHH
Confidence            99988764

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.86  E-value=1.6e-21  Score=150.90  Aligned_cols=82  Identities=20%  Similarity=0.164  Sum_probs=62.8

Q ss_pred             CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhccccCCCcCHHHH
Q 039869           64 IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHV  142 (152)
Q Consensus        64 ~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~  142 (152)
                      +.++||||+||++||+++|+.||.+.      ....+...+.... ..+.....++..+.+++..||..||.+||++.++
T Consensus       558 ~~~~DiwSlG~il~ElltG~~pf~~~------~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~  631 (669)
T cd05610         558 GPAVDWWALGVCLFEFLTGIPPFNDE------TPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKEL  631 (669)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHH
Confidence            34689999999999999999777654      3444444432222 2233344678889999999999999999999999


Q ss_pred             hcCCCCCCC
Q 039869          143 LAHPFPSVD  151 (152)
Q Consensus       143 l~h~~~~~~  151 (152)
                      +.||||...
T Consensus       632 l~h~~~~~~  640 (669)
T cd05610         632 KQHPLFHGV  640 (669)
T ss_pred             HhCHhhcCC
Confidence            999999763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=3.8e-21  Score=146.33  Aligned_cols=132  Identities=19%  Similarity=0.277  Sum_probs=110.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      +.++-.+..+.+..||++|+.|||+.+++||||...|+|+.+.   ..+++.|||                         
T Consensus       792 r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP---~hvkitdfgla~ll~~d~~ey~~~~gK~pikwma  868 (1177)
T KOG1025|consen  792 RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP---NHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMA  868 (1177)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC---CeEEEEecchhhccCcccccccccccccCcHHHH
Confidence            4567788999999999999999999999999999999999766   566777776                         


Q ss_pred             --HhhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           57 --QRHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        57 --~~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                        ......++.++||||+||.+||++| |..|+.+.      ..+++...+..+.. ...|..++-++.-++.+||+.|+
T Consensus       869 le~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi------~~~eI~dlle~geR-LsqPpiCtiDVy~~mvkCwmid~  941 (1177)
T KOG1025|consen  869 LESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI------PAEEIPDLLEKGER-LSQPPICTIDVYMVMVKCWMIDA  941 (1177)
T ss_pred             HHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC------CHHHhhHHHhcccc-CCCCCCccHHHHHHHHHHhccCc
Confidence              3344456888999999999999998 45566555      67777777776554 66788899999999999999999


Q ss_pred             CCCcCHHHHh
Q 039869          134 QLRWTAKHVL  143 (152)
Q Consensus       134 ~~R~~~~~~l  143 (152)
                      ..||+++++.
T Consensus       942 ~~rp~fkel~  951 (1177)
T KOG1025|consen  942 DSRPTFKELA  951 (1177)
T ss_pred             ccCccHHHHH
Confidence            9999998864

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.85  E-value=1.7e-22  Score=152.73  Aligned_cols=133  Identities=17%  Similarity=0.264  Sum_probs=112.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      .+.|+..++..+.+.|+.|+.||.+.++|||||...|||+++|   -.+|++|||..+                      
T Consensus       725 DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn---LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWT  801 (996)
T KOG0196|consen  725 DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWT  801 (996)
T ss_pred             CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc---eEEEeccccceeecccCCCccccccCCccceeec
Confidence            3568889999999999999999999999999999999999999   778889998331                      


Q ss_pred             ------cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           60 ------GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        60 ------~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                            ..+++.++||||+|+++||.++ |..|+|..      ...++...++.+.. .+-|.+++..+.+|+..||++|
T Consensus       802 APEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm------SNQdVIkaIe~gyR-LPpPmDCP~aL~qLMldCWqkd  874 (996)
T KOG0196|consen  802 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM------SNQDVIKAIEQGYR-LPPPMDCPAALYQLMLDCWQKD  874 (996)
T ss_pred             ChhHhhhcccCchhhccccceEEEEecccCCCccccc------chHHHHHHHHhccC-CCCCCCCcHHHHHHHHHHHHHH
Confidence                  1123678999999999999876 66677776      77888888876554 4457899999999999999999


Q ss_pred             cCCCcCHHHHhc
Q 039869          133 HQLRWTAKHVLA  144 (152)
Q Consensus       133 p~~R~~~~~~l~  144 (152)
                      -.+||++.|++.
T Consensus       875 R~~RP~F~qiV~  886 (996)
T KOG0196|consen  875 RNRRPKFAQIVS  886 (996)
T ss_pred             hhcCCCHHHHHH
Confidence            999999999863

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=4.5e-22  Score=151.66  Aligned_cols=138  Identities=30%  Similarity=0.475  Sum_probs=112.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------HhhcCC------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------QRHGLL------   62 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------~~~~~~------   62 (152)
                      +..+.|..+..|++.++.|+++||.+.++|||+|-.|||+..+   +.+++.|||             +..|.+      
T Consensus       117 g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e---~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPE  193 (953)
T KOG0587|consen  117 GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPE  193 (953)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc---CcEEEeeeeeeeeeecccccccCcCCCcccccce
Confidence            4568899999999999999999999999999999999999999   667777776             222333      


Q ss_pred             -----------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC---CCCCCCChhHHHHHHHh
Q 039869           63 -----------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKC  128 (152)
Q Consensus        63 -----------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~  128 (152)
                                 ++..+|+||||++..|+.-|.+|+.+.      -+...+..+.  +++|   ..|..+++++-+||..|
T Consensus       194 Viac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm------HPmraLF~Ip--RNPPPkLkrp~kWs~~FndFIs~c  265 (953)
T KOG0587|consen  194 VIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM------HPMRALFLIP--RNPPPKLKRPKKWSKKFNDFISTC  265 (953)
T ss_pred             eeecccCCCCCcccccchhhccceeehhcCCCCCccCc------chhhhhccCC--CCCCccccchhhHHHHHHHHHHHH
Confidence                       367799999999999999999776665      3333333332  2222   23677999999999999


Q ss_pred             hccccCCCcCHHHHhcCCCCCC
Q 039869          129 FIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      |..|..+||+..++++|||+.+
T Consensus       266 L~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  266 LVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             HhhccccCcchhhhccCCcccc
Confidence            9999999999999999999974

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1.9e-21  Score=140.45  Aligned_cols=137  Identities=23%  Similarity=0.241  Sum_probs=94.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC---CccCCCCCCCeeeecCCCchhHHHHHHHHh--------------hc------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHG---LVHCDIQGDNTLLVAGKDAHEAEISAFLQR--------------HG------   60 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~---i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~--------------~~------   60 (152)
                      ++++.+...||.+++.||+|||...   |+|||||++|||+|.+   ...+++|||..              .|      
T Consensus       170 ~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~---~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~  246 (361)
T KOG1187|consen  170 PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED---FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLA  246 (361)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC---CCEEccCccCcccCCccccceeeecCCCCccCC
Confidence            7899999999999999999999753   9999999999999988   55566666521              11      


Q ss_pred             ------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH-HHHHhcCC----CCCCC-CCCC-----hhHHH
Q 039869           61 ------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL-ELIAFSSE----VPEFP-SNIS-----EDGRD  123 (152)
Q Consensus        61 ------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~-~~~~-----~~~~~  123 (152)
                            ...+.++||||||+++.|+++|+.+.....+.......+.. .....+..    -+.+. ..+.     ..+..
T Consensus       247 PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~  326 (361)
T KOG1187|consen  247 PEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAE  326 (361)
T ss_pred             hhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHH
Confidence                  11356899999999999999999555543322222222221 11111110    01111 2223     22567


Q ss_pred             HHHHhhccccCCCcCHHHHh
Q 039869          124 FLSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       124 ll~~~l~~~p~~R~~~~~~l  143 (152)
                      +..+|+..+|+.||++.+++
T Consensus       327 ~a~~C~~~~~~~RP~m~~Vv  346 (361)
T KOG1187|consen  327 LALRCLRPDPKERPTMSQVV  346 (361)
T ss_pred             HHHHHcCcCCCcCcCHHHHH
Confidence            78889999999999999875

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.85  E-value=3.9e-21  Score=154.06  Aligned_cols=139  Identities=17%  Similarity=0.179  Sum_probs=92.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCCccCCCCCCCeeeecCCCchh-----------------HHHHHHHHhhcCCCC
Q 039869            5 LPEHEIGRYTKDILRGLDHIH---SHGLVHCDIQGDNTLLVAGKDAHE-----------------AEISAFLQRHGLLLI   64 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh---~~~i~h~dlk~~Nil~~~~~~~~~-----------------~~l~~~~~~~~~~~~   64 (152)
                      +++.++..++.|++.|++|||   +.+++|||+||+||+++.+...+.                 ..+...+...+..++
T Consensus       777 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  856 (968)
T PLN00113        777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDIT  856 (968)
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCCC
Confidence            678899999999999999999   669999999999999976533221                 111122233344567


Q ss_pred             cchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-----CCCC------CCCCCChhHHHHHHHhhcccc
Q 039869           65 YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-----EVPE------FPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        65 ~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~ll~~~l~~~p  133 (152)
                      .++||||+||++||+++|+.|+...... .....+.........     ..+.      .+.....++.+++.+|+..+|
T Consensus       857 ~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P  935 (968)
T PLN00113        857 EKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDP  935 (968)
T ss_pred             cccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCc
Confidence            8999999999999999999777433221 111111111110000     0011      111123356789999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       936 ~~RPt~~evl~  946 (968)
T PLN00113        936 TARPCANDVLK  946 (968)
T ss_pred             hhCcCHHHHHH
Confidence            99999999874

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.9e-21  Score=140.02  Aligned_cols=142  Identities=21%  Similarity=0.353  Sum_probs=111.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC--CCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH--GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~--~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------------------   59 (152)
                      +-+++.+++.|+-||+.||.||.+.  -|+|-||||.|||+-.+..++.++|+|||...                     
T Consensus       563 klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAG  642 (775)
T KOG1151|consen  563 KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAG  642 (775)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCc
Confidence            3468999999999999999999976  69999999999999888888899999998211                     


Q ss_pred             ---------------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHh-cCCC-CCCCCCCChhH
Q 039869           60 ---------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAF-SSEV-PEFPSNISEDG  121 (152)
Q Consensus        60 ---------------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~  121 (152)
                                     .+..+.++||||+||++|+++.|+.||-...     ...++++. ... .+.. .+.-.-.+.+.
T Consensus       643 TYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq-----sQQdILqeNTIlkAtEVqFP~KPvVsseA  717 (775)
T KOG1151|consen  643 TYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ-----SQQDILQENTILKATEVQFPPKPVVSSEA  717 (775)
T ss_pred             eeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch-----hHHHHHhhhchhcceeccCCCCCccCHHH
Confidence                           1112678999999999999999998886654     33344332 211 1111 12224478899


Q ss_pred             HHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          122 RDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       122 ~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                      .+||++||.+.-+.|....++..||||.
T Consensus       718 kaFIRRCLaYRKeDR~DV~qLA~dpyll  745 (775)
T KOG1151|consen  718 KAFIRRCLAYRKEDRIDVQQLACDPYLL  745 (775)
T ss_pred             HHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence            9999999999999999999999999985

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.82  E-value=2.5e-20  Score=122.27  Aligned_cols=84  Identities=21%  Similarity=0.401  Sum_probs=70.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------   56 (152)
                      ++.++|..+-+|+..++.||.|||++ .++|||+||+|||++..   +.+++.|||                        
T Consensus       142 g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~---GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPE  218 (282)
T KOG0984|consen  142 GGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYD---GQVKICDFGISGYLVDSIAKTMDAGCKPYMAPE  218 (282)
T ss_pred             CCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccC---CcEEEcccccceeehhhhHHHHhcCCCccCChh
Confidence            56789999999999999999999965 89999999999999998   555666665                        


Q ss_pred             ----HhhcCCCCcchhHHHHHHHHHHHHhcCcccCC
Q 039869           57 ----QRHGLLLIYHVDTWALGRVFVEMMTAEISAWG   88 (152)
Q Consensus        57 ----~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~   88 (152)
                          ......|+.++|+||||+.+.|+++++.|+..
T Consensus       219 ri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  219 RINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             hcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence                11223568899999999999999999966643

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.80  E-value=1.1e-19  Score=136.29  Aligned_cols=134  Identities=22%  Similarity=0.301  Sum_probs=95.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC-CchhHHHHHHHHhh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK-DAHEAEISAFLQRH---------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~-~~~~~~l~~~~~~~---------------------   59 (152)
                      ..+|++.+++.+...+..|+.|||++||+||||||.||++-.+. ....-|++|||...                     
T Consensus       114 ~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPe  193 (732)
T KOG4250|consen  114 AYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPE  193 (732)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChH
Confidence            46799999999999999999999999999999999999985443 33455889998221                     


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-------------------CCCCCCC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-------------------VPEFPSN  116 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~  116 (152)
                          ...++..+|.||+||++|+++||..||..-....  +..++.........                   ..+.|..
T Consensus       194 l~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk--~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~  271 (732)
T KOG4250|consen  194 LYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK--NNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNH  271 (732)
T ss_pred             HHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc--ccchhhhhhhccCCCceeEeeecccCCceeeeccCCCccc
Confidence                3456778999999999999999998886543221  11122211111110                   0112333


Q ss_pred             C----ChhHHHHHHHhhccccCCCc
Q 039869          117 I----SEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus       117 ~----~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .    ...+-..+..+|.++|.+|+
T Consensus       272 Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  272 LSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             ccHHHHhhhhHHHHHHHhhhHHHhC
Confidence            3    33456788899999999999

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.80  E-value=1.3e-19  Score=133.82  Aligned_cols=129  Identities=19%  Similarity=0.247  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----c----------------------
Q 039869            7 EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----G----------------------   60 (152)
Q Consensus         7 ~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----~----------------------   60 (152)
                      -.....|+.||+.|++||.+.++||||+.+.|||++.+   ..+|+.|||..+    |                      
T Consensus       636 t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e---~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsil  712 (807)
T KOG1094|consen  636 TAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGE---FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESIL  712 (807)
T ss_pred             cchhHHHHHHHHHHHHHHHhhchhhccccccceeecCc---ccEEecCcccccccccCCceeeecceeeeeeehhHHHHH
Confidence            34566799999999999999999999999999999999   788888887332    1                      


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhc--CcccCCccCCCCCChHHHHHHHH-hcCC-----CCCCCCCCChhHHHHHHHhhcc
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTA--EISAWGSFGRGLASRDDLLELIA-FSSE-----VPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                       .+++.++|+|+||+.+||+++-  ..|+...      ..+.+.++.. ....     .+..|.-++..+.+++..||..
T Consensus       713 lgkFttaSDvWafgvTlwE~~~~C~e~Py~~l------t~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~  786 (807)
T KOG1094|consen  713 LGKFTTASDVWAFGVTLWEVFMLCREQPYSQL------TDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRR  786 (807)
T ss_pred             hccccchhhhhhhHHHHHHHHHHHhhCchhhh------hHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhch
Confidence             2247899999999999999763  3344332      3344443321 1111     2346778999999999999999


Q ss_pred             ccCCCcCHHHHhc
Q 039869          132 VHQLRWTAKHVLA  144 (152)
Q Consensus       132 ~p~~R~~~~~~l~  144 (152)
                      +..+||+++++..
T Consensus       787 es~~RPsFe~lh~  799 (807)
T KOG1094|consen  787 ESEQRPSFEQLHL  799 (807)
T ss_pred             hhhcCCCHHHHHH
Confidence            9999999999754

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=5.1e-21  Score=145.61  Aligned_cols=146  Identities=18%  Similarity=0.210  Sum_probs=108.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.++..++..+++|++.||+|+|..|+.|||+|++|+++..+   +.+++.|||...                       
T Consensus       415 ~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~---g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~  491 (601)
T KOG0590|consen  415 GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTEN---GILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYL  491 (601)
T ss_pred             cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecC---CceEEeecCcceeeccCcchhhhhhcCcccCCcCc
Confidence            368889999999999999999999999999999999999988   677888887211                       


Q ss_pred             ------cCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCC-hHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           60 ------GLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS-RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        60 ------~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                            +..| ....||||.|+++..|.+|+.|+-.....+... ................+...++.+.+.+|.++|+.
T Consensus       492 apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~  571 (601)
T KOG0590|consen  492 APEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQL  571 (601)
T ss_pred             CcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccC
Confidence                  1111 355899999999999999986665443222111 00000000001111123456888999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~~  151 (152)
                      +|.+|.|++++++.+||+.-
T Consensus       572 ~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  572 DPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             ChhheecHHHHhhChHhhhc
Confidence            99999999999999999864

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.80  E-value=6.7e-20  Score=130.25  Aligned_cols=145  Identities=25%  Similarity=0.364  Sum_probs=97.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .++..+++.|.+.++.||+++|.+||+||||||+|++++...+.+  .+.|||...                        
T Consensus       128 ~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg--~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g  205 (418)
T KOG1167|consen  128 SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRG--VLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMG  205 (418)
T ss_pred             cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCc--eEEechhHHHHHhhhhhhhhhhhhcccCCcccc
Confidence            367789999999999999999999999999999999996433222  233333000                        


Q ss_pred             ---------------------------------cCC-------------CCcchhHHHHHHHHHHHHhcCcccCCccCCC
Q 039869           60 ---------------------------------GLL-------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRG   93 (152)
Q Consensus        60 ---------------------------------~~~-------------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~   93 (152)
                                                       |++             .+.++||||.|+++..+++++.||+-.....
T Consensus       206 ~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~  285 (418)
T KOG1167|consen  206 KDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDA  285 (418)
T ss_pred             CcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCcccc
Confidence                                             000             1567999999999999999998887543311


Q ss_pred             CCCh--------HH---------------------HHH-HHHhcCC-------------CCCCC-CCCChhHHHHHHHhh
Q 039869           94 LASR--------DD---------------------LLE-LIAFSSE-------------VPEFP-SNISEDGRDFLSKCF  129 (152)
Q Consensus        94 ~~~~--------~~---------------------~~~-~~~~~~~-------------~~~~~-~~~~~~~~~ll~~~l  129 (152)
                      ..-.        .+                     +.. ...+...             ..... ...+..+.+++.+|+
T Consensus       286 ~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~l  365 (418)
T KOG1167|consen  286 DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCL  365 (418)
T ss_pred             chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHc
Confidence            1000        00                     000 0000000             00001 123447899999999


Q ss_pred             ccccCCCcCHHHHhcCCCCCC
Q 039869          130 IRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       130 ~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ..+|.+|.+++++|+||||.+
T Consensus       366 e~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  366 ELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             cCChhhcccHHHHhcCcCCcc
Confidence            999999999999999999974

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-19  Score=123.67  Aligned_cols=132  Identities=17%  Similarity=0.245  Sum_probs=95.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCC---------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL---------------------   62 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~---------------------   62 (152)
                      ++.|.-.+.++.|++.|+.|+|++++||||||.+||||-.. +...+++.|||......                     
T Consensus       117 GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~  195 (378)
T KOG1345|consen  117 GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTV  195 (378)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeecccccccCceehhhhhhcccCCcHHHhhc
Confidence            46688889999999999999999999999999999999543 22377889998332221                     


Q ss_pred             ------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH-hcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           63 ------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA-FSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        63 ------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                            ...++|+|.||+++|.+++|+.|+. .........-+..+... .....|...+.+++.+..+.++.|..+|+.
T Consensus       196 ~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ-ka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~d  274 (378)
T KOG1345|consen  196 VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ-KASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKD  274 (378)
T ss_pred             cccceEecccccchheeeeeeeeecCCCcch-hhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccc
Confidence                  1456899999999999999995554 32222222222222221 112234455668999999999999999999


Q ss_pred             Cc
Q 039869          136 RW  137 (152)
Q Consensus       136 R~  137 (152)
                      |.
T Consensus       275 rc  276 (378)
T KOG1345|consen  275 RC  276 (378)
T ss_pred             cc
Confidence            93

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.76  E-value=6.4e-19  Score=131.68  Aligned_cols=142  Identities=26%  Similarity=0.347  Sum_probs=111.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------HhhcCC------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------QRHGLL------   62 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------~~~~~~------   62 (152)
                      .+++++.++..++++.+.||.|||+.|-+|||||-+||++..+   +.+++.|||             .+-|++      
T Consensus       106 TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~---gDvklaDfgvsaqitati~KrksfiGtpywmapE  182 (829)
T KOG0576|consen  106 TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE---GDVKLADFGVSAQITATIAKRKSFIGTPYWMAPE  182 (829)
T ss_pred             cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc---CceeecccCchhhhhhhhhhhhcccCCccccchh
Confidence            3679999999999999999999999999999999999999988   677777776             122333      


Q ss_pred             ---------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC--CCCCCChhHHHHHHHhhcc
Q 039869           63 ---------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE--FPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        63 ---------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~  131 (152)
                               |...+|+|++|+...|+.--++|.+...     .+..+......+..++.  -+..+++.+.+|++.++-.
T Consensus       183 vaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-----pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altk  257 (829)
T KOG0576|consen  183 VAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-----PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTK  257 (829)
T ss_pred             HHHHHhcccccccccccccccchhhhhhcCCcccccc-----hHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcC
Confidence                     3567999999998888888774544442     33333333333333333  3455889999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~~  151 (152)
                      +|++||+++.+|.|||..+.
T Consensus       258 npKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  258 NPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             CCccCCChhhheeceeeccc
Confidence            99999999999999998764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.76  E-value=2.8e-18  Score=114.27  Aligned_cols=101  Identities=31%  Similarity=0.496  Sum_probs=85.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec-CCCchhHHHHHHHHh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++...+..++.+++.++++||+.|++|+||+|.||+++. .   ..+.++|++..                        
T Consensus        88 ~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~  164 (215)
T cd00180          88 KLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDN---GKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEV  164 (215)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCC---CcEEEecCCceEEccCCcchhhcccCCCCccChhH
Confidence            5788999999999999999999999999999999999987 5   45555555411                        


Q ss_pred             -hcC-CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGL-LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~-~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+. ..+.+.|+|++|++++++                                       ..+.+++..|+..+|++|
T Consensus       165 ~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------~~~~~~l~~~l~~~p~~R  205 (215)
T cd00180         165 LLGKGYYSEKSDIWSLGVILYEL---------------------------------------PELKDLIRKMLQKDPEKR  205 (215)
T ss_pred             hcccCCCCchhhhHHHHHHHHHH---------------------------------------HHHHHHHHHHhhCCcccC
Confidence             111 345779999999999998                                       788999999999999999


Q ss_pred             cCHHHHhcCC
Q 039869          137 WTAKHVLAHP  146 (152)
Q Consensus       137 ~~~~~~l~h~  146 (152)
                      |++.++++++
T Consensus       206 ~~~~~l~~~~  215 (215)
T cd00180         206 PSAKEILEHL  215 (215)
T ss_pred             cCHHHHhhCC
Confidence            9999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=1.9e-18  Score=123.96  Aligned_cols=138  Identities=16%  Similarity=0.216  Sum_probs=104.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhC--------CCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCC----------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSH--------GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL----------   63 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~--------~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~----------   63 (152)
                      ..+++.....+++..++.||++||..        .|.|||||+.|||+..+   +.+.|+|+|.......          
T Consensus       302 r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn---~~C~IADLGLAv~h~~~t~~idi~~N  378 (513)
T KOG2052|consen  302 RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSDTDTIDIPPN  378 (513)
T ss_pred             hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC---CcEEEeeceeeEEecccCCcccCCCC
Confidence            35678899999999999999999975        68999999999999988   7888888873211110          


Q ss_pred             -------------------------CcchhHHHHHHHHHHHHhcC---------cccCCccCCCCCChHHHHHHHHhcCC
Q 039869           64 -------------------------IYHVDTWALGRVFVEMMTAE---------ISAWGSFGRGLASRDDLLELIAFSSE  109 (152)
Q Consensus        64 -------------------------~~~~DvwslG~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (152)
                                               ...+||||||.++||++...         .+|+......+.+.++...-++..+.
T Consensus       379 ~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~  458 (513)
T KOG2052|consen  379 PRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKL  458 (513)
T ss_pred             CccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeeccc
Confidence                                     23589999999999998742         34444444444556666677777777


Q ss_pred             CCCCCCCCCh-----hHHHHHHHhhccccCCCcCHHHH
Q 039869          110 VPEFPSNISE-----DGRDFLSKCFIRVHQLRWTAKHV  142 (152)
Q Consensus       110 ~~~~~~~~~~-----~~~~ll~~~l~~~p~~R~~~~~~  142 (152)
                      .|.+|+.+..     .+..+++.||..+|..|.|+-.+
T Consensus       459 RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri  496 (513)
T KOG2052|consen  459 RPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI  496 (513)
T ss_pred             CCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence            7777765443     36788999999999999987654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.73  E-value=7.4e-18  Score=117.39  Aligned_cols=112  Identities=20%  Similarity=0.183  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------------h
Q 039869           10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------------H   59 (152)
Q Consensus        10 ~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------------~   59 (152)
                      ...+..|++..+++||..|++|+||+|+|++++.+   +.+.+++|+..                              .
T Consensus       147 rl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~---G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~  223 (288)
T PF14531_consen  147 RLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQD---GGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQN  223 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TT---S-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHS
T ss_pred             HHHHHHHHHHHHHHHhhcceEecccceeeEEEcCC---CCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcc
Confidence            35666999999999999999999999999999988   78888888610                              1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ...++.+.|.|++|+++|.++++..|+-..........            ....+.++++.+..+|..+|+.+|.+|
T Consensus       224 ~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  224 NAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             EEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             cceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            22346788999999999999999977754432111111            112334789999999999999999987

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.72  E-value=2.7e-17  Score=128.80  Aligned_cols=129  Identities=20%  Similarity=0.208  Sum_probs=89.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG------------------------   60 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~------------------------   60 (152)
                      +...+-+.|+.|+++||..+|..||+|||||.+||||.+=   .=+.++||..+..                        
T Consensus       117 L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW---NW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCY  193 (1431)
T KOG1240|consen  117 LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW---NWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCY  193 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee---chhhhhcccccCCccCCCCCcccceEEEecCCceeee
Confidence            4677889999999999999999999999999999999653   2335666652110                        


Q ss_pred             -------------------CCCCcchhHHHHHHHHHHHHhc-CcccCCccCCCCCChHHHHHHHHhcCCCC-C-CCCCCC
Q 039869           61 -------------------LLLIYHVDTWALGRVFVEMMTA-EISAWGSFGRGLASRDDLLELIAFSSEVP-E-FPSNIS  118 (152)
Q Consensus        61 -------------------~~~~~~~DvwslG~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~  118 (152)
                                         ...+.++||+|+||+++|+++- +++|--         ..+..+..-...-+ . +..-..
T Consensus       194 iAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---------SQL~aYr~~~~~~~e~~Le~Ied  264 (1431)
T KOG1240|consen  194 IAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---------SQLLAYRSGNADDPEQLLEKIED  264 (1431)
T ss_pred             cChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---------HHHHhHhccCccCHHHHHHhCcC
Confidence                               0135679999999999999874 544421         11111111100000 0 011123


Q ss_pred             hhHHHHHHHhhccccCCCcCHHHHhcC
Q 039869          119 EDGRDFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       119 ~~~~~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      ...++++..|++.||++|.++++.|+-
T Consensus       265 ~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  265 VSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ccHHHHHHHHHccCchhccCHHHHHHh
Confidence            468999999999999999999998853

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=3.8e-17  Score=116.64  Aligned_cols=131  Identities=20%  Similarity=0.239  Sum_probs=95.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC-CchhHHHHHHHHh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK-DAHEAEISAFLQR------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~-~~~~~~l~~~~~~------------------------   58 (152)
                      ..+......+..|+++|+.|||.+|+.|||+|++|||+.... ..-.+.++|||..                        
T Consensus       337 ~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~  416 (598)
T KOG4158|consen  337 HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAK  416 (598)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcce
Confidence            355677888999999999999999999999999999995332 2233456777611                        


Q ss_pred             -------hcCC------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHH
Q 039869           59 -------HGLL------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFL  125 (152)
Q Consensus        59 -------~~~~------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  125 (152)
                             ...+      ...+.|.|+.|.+.||++....||++.-      ...+....=.....|.+|..+++.+++++
T Consensus       417 lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG------em~L~~r~Yqe~qLPalp~~vpp~~rqlV  490 (598)
T KOG4158|consen  417 LMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG------EMLLDTRTYQESQLPALPSRVPPVARQLV  490 (598)
T ss_pred             ecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc------hheechhhhhhhhCCCCcccCChHHHHHH
Confidence                   0000      1467999999999999999998998731      11111111112234678889999999999


Q ss_pred             HHhhccccCCCcCHH
Q 039869          126 SKCFIRVHQLRWTAK  140 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~  140 (152)
                      ..+|+.||++|++..
T Consensus       491 ~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  491 FDLLKRDPSKRVSPN  505 (598)
T ss_pred             HHHhcCCccccCCcc
Confidence            999999999999754

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.69  E-value=6.3e-17  Score=116.98  Aligned_cols=136  Identities=21%  Similarity=0.301  Sum_probs=100.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC---------CCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCC-----------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH---------GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL-----------   62 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~---------~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~-----------   62 (152)
                      ..+++.....++..++.||+|||+.         .|+|||||+.|||+.+.   ..+.|+|||......           
T Consensus       302 ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D---lTccIaDFGLAl~~~p~~~~~d~~~q  378 (534)
T KOG3653|consen  302 NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND---LTCCIADFGLALRLEPGKPQGDTHGQ  378 (534)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC---CcEEeeccceeEEecCCCCCcchhhh
Confidence            3578899999999999999999974         79999999999999877   778888888221111           


Q ss_pred             ----------------------CCcchhHHHHHHHHHHHHhcCcccC-CccCCC----------CCChHHHHHHHHhcCC
Q 039869           63 ----------------------LIYHVDTWALGRVFVEMMTAEISAW-GSFGRG----------LASRDDLLELIAFSSE  109 (152)
Q Consensus        63 ----------------------~~~~~DvwslG~~l~~~~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~  109 (152)
                                            .-.+.||||+|.+|||++++....+ +..+..          ...-+++...+...+.
T Consensus       379 VGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~  458 (534)
T KOG3653|consen  379 VGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQ  458 (534)
T ss_pred             hhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhcc
Confidence                                  1245899999999999999763332 222111          1234556666666666


Q ss_pred             CCCCCCCC-----ChhHHHHHHHhhccccCCCcCHHH
Q 039869          110 VPEFPSNI-----SEDGRDFLSKCFIRVHQLRWTAKH  141 (152)
Q Consensus       110 ~~~~~~~~-----~~~~~~ll~~~l~~~p~~R~~~~~  141 (152)
                      +|.+|..+     ..-+.+.+..||+-||+.|.|+.=
T Consensus       459 RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~C  495 (534)
T KOG3653|consen  459 RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGC  495 (534)
T ss_pred             CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence            77666443     334789999999999999998763

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.60  E-value=4e-16  Score=104.94  Aligned_cols=138  Identities=13%  Similarity=0.134  Sum_probs=103.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.|+..+++.++.|++.-++|+|.++++||||||+|+|.+-+..+..+.+.|||..                        
T Consensus       106 R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTa  185 (341)
T KOG1163|consen  106 RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTA  185 (341)
T ss_pred             hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceee
Confidence            46889999999999999999999999999999999999988877777788888722                        


Q ss_pred             --------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhc
Q 039869           59 --------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 --------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                              .|..-++..|+-|+|.+|..+-.|..|+.+-.+.+..+..+.............++..+|.++.-.+.=|-.
T Consensus       186 RYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~  265 (341)
T KOG1163|consen  186 RYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRG  265 (341)
T ss_pred             eehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhh
Confidence                    122226778999999999988999978777654322222222222222344445678899999888888877


Q ss_pred             cccCCCcCHH
Q 039869          131 RVHQLRWTAK  140 (152)
Q Consensus       131 ~~p~~R~~~~  140 (152)
                      .--++.|...
T Consensus       266 L~F~E~Pdy~  275 (341)
T KOG1163|consen  266 LGFEEKPDYM  275 (341)
T ss_pred             cCCCCCCcHH
Confidence            7776766543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.59  E-value=1.5e-15  Score=106.23  Aligned_cols=136  Identities=18%  Similarity=0.151  Sum_probs=99.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC--CchhHHHHHHH-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK--DAHEAEISAFL-----------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~--~~~~~~l~~~~-----------------------   56 (152)
                      ++.|+.+.++.+|.|++.-++++|++.+|+|||||+|+||+..+  +...+.+.|||                       
T Consensus       118 gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLs  197 (449)
T KOG1165|consen  118 GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLS  197 (449)
T ss_pred             cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccc
Confidence            56799999999999999999999999999999999999997532  34456778887                       


Q ss_pred             ---------HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH---HhcCCCCCCCCCCChhHHHH
Q 039869           57 ---------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        57 ---------~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l  124 (152)
                               +..|..-++..|+.|+|.++..++.|..|+.+-.+..+   .+..+++   ........+..+++.++...
T Consensus       198 GTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn---K~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Y  274 (449)
T KOG1165|consen  198 GTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN---KEKYEKIGETKRSTPIEVLCEGFPEEFATY  274 (449)
T ss_pred             cceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch---HHHHHHhccccccCCHHHHHhcCHHHHHHH
Confidence                     22233337789999999999999999988877644322   2222222   22223335567788888887


Q ss_pred             HHHhhccccCCCcCHH
Q 039869          125 LSKCFIRVHQLRWTAK  140 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~  140 (152)
                      +.-.-..+-.+-|...
T Consensus       275 l~yvR~L~F~E~PDYd  290 (449)
T KOG1165|consen  275 LRYVRRLDFFETPDYD  290 (449)
T ss_pred             HHHHHhcCcccCCCHH
Confidence            7776666666666544

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.57  E-value=7.8e-15  Score=99.10  Aligned_cols=81  Identities=31%  Similarity=0.427  Sum_probs=66.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------h
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------R   58 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------~   58 (152)
                      +++..+..++.+++.++.+||..+++|+|++|+|++++.+   ..++++||+.                          .
T Consensus        95 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~  171 (225)
T smart00221       95 LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMD---GLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVL  171 (225)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEeeCceeeEecCcccccccceeccCCcCCHhHh
Confidence            7889999999999999999999999999999999999876   4455555541                          1


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWG   88 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~   88 (152)
                       .+..++.++|+|++|++++++++|+.||..
T Consensus       172 ~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      172 LGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence             223334689999999999999999977755

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.56  E-value=2.7e-14  Score=102.32  Aligned_cols=138  Identities=13%  Similarity=0.063  Sum_probs=95.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC--CchhHHHHHHHHhh---------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK--DAHEAEISAFLQRH---------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~--~~~~~~l~~~~~~~---------------------   59 (152)
                      +.|+..++..++.|++.+|.++|+.|++||||||+|++++...  ....+.+.|||...                     
T Consensus       117 ~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~  196 (322)
T KOG1164|consen  117 GRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGL  196 (322)
T ss_pred             CCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccC
Confidence            6799999999999999999999999999999999999998653  23556677776332                     


Q ss_pred             --------------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHH
Q 039869           60 --------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFL  125 (152)
Q Consensus        60 --------------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  125 (152)
                                    +...+.+.|+||++.++.++..|..|+.+.....  ....+..... ...........+.++.++.
T Consensus       197 ~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  273 (322)
T KOG1164|consen  197 FRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD--LKSKFEKDPR-KLLTDRFGDLKPEEFAKIL  273 (322)
T ss_pred             CCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc--hHHHHHHHhh-hhccccccCCChHHHHHHH
Confidence                          1112567899999999999999984543332100  1111111111 1111113445667788888


Q ss_pred             HHhhccccCCCcCHHHHh
Q 039869          126 SKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~~~l  143 (152)
                      ..+-..+...+|....+.
T Consensus       274 ~~~~~~~~~~~Pdy~~~~  291 (322)
T KOG1164|consen  274 EYIDSLDYEDKPDYEKLA  291 (322)
T ss_pred             HHhhccCCcCCCCHHHHH
Confidence            888888999999877653

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.56  E-value=1.4e-14  Score=113.48  Aligned_cols=126  Identities=23%  Similarity=0.360  Sum_probs=98.1

Q ss_pred             HHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------------hcCC------
Q 039869           17 ILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------------HGLL------   62 (152)
Q Consensus        17 i~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------------~~~~------   62 (152)
                      ++.+++|||+.||+|||+||+|.+|..=   +.++++||+..                            .|++      
T Consensus       152 mvla~Eylh~ygivhrdlkpdnllIT~m---GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe  228 (1205)
T KOG0606|consen  152 MVLAVEYLHSYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE  228 (1205)
T ss_pred             hhHHhHhhccCCeecCCCCCCcceeeec---ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence            4788999999999999999999999765   66777777611                            1111      


Q ss_pred             ------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           63 ------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        63 ------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                            |...+|=|++|+++|+++-|+.||++.      .+++++.. +......++-....+.++.+++..+|..+|..
T Consensus       229 VilrqgygkpvdwwamGiIlyeFLVgcvpffGd------tpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~  302 (1205)
T KOG0606|consen  229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD------TPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLC  302 (1205)
T ss_pred             hhhhhccCCCccHHHHHHHHHHHheeeeeccCC------CHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHh
Confidence                  345689999999999999999999998      44555443 33334455556678999999999999999999


Q ss_pred             Cc---CHHHHhcCCCCCCC
Q 039869          136 RW---TAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~---~~~~~l~h~~~~~~  151 (152)
                      |.   .+-++.+|+||+.-
T Consensus       303 Rlgt~ga~evk~h~ff~~L  321 (1205)
T KOG0606|consen  303 RLGTGGALEVKQHGFFQLL  321 (1205)
T ss_pred             hcccchhhhhhhccceeec
Confidence            96   34467899999863

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.56  E-value=6.4e-16  Score=114.47  Aligned_cols=83  Identities=24%  Similarity=0.394  Sum_probs=69.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------H   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------~   59 (152)
                      ..++|.+++.|++||+-|+++||+.||+|||||=+|+.++.+   +-+++.|||..                       .
T Consensus       665 p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~---g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~  741 (772)
T KOG1152|consen  665 PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN---GFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLG  741 (772)
T ss_pred             CccchHHHHHHHHHHHhccccccccCceecccccccEEEecC---CeEEEeeccchhhhcCCCcceeeeeccccchhhhC
Confidence            468899999999999999999999999999999999999999   67777777622                       2


Q ss_pred             cCCC-CcchhHHHHHHHHHHHHhcCcccCC
Q 039869           60 GLLL-IYHVDTWALGRVFVEMMTAEISAWG   88 (152)
Q Consensus        60 ~~~~-~~~~DvwslG~~l~~~~~~~~~~~~   88 (152)
                      |.+| ....|||++|++||.++....|++.
T Consensus       742 g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  742 GEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             CCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            2222 3458999999999999988877764

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.55  E-value=6.8e-15  Score=109.68  Aligned_cols=133  Identities=23%  Similarity=0.368  Sum_probs=106.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------cC----------CC
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------GL----------LL   63 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------~~----------~~   63 (152)
                      ..+++...+.+...++.+++++|..+++|+|+|++||+++.+   +.+++.||+...         |.          ..
T Consensus        92 ~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~---Ghi~~tdfglske~v~~~~~cgt~eymApEI~~gh  168 (612)
T KOG0603|consen   92 VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE---GHIKLTDFGLSKEAVKEKIACGTYEYRAPEIINGH  168 (612)
T ss_pred             CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc---CccccCCchhhhHhHhhhhcccchhhhhhHhhhcc
Confidence            357788999999999999999999999999999999999988   666777766211         00          23


Q ss_pred             CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC-----
Q 039869           64 IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT-----  138 (152)
Q Consensus        64 ~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~-----  138 (152)
                      ..+.|.||+|++.+|+++|-.||.+          +....+.  .....+|...+..+.+++..++..+|..|..     
T Consensus       169 ~~a~D~ws~gvl~felltg~~pf~~----------~~~~~Il--~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~  236 (612)
T KOG0603|consen  169 LSAADWWSFGVLAFELLTGTLPFGG----------DTMKRIL--KAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDG  236 (612)
T ss_pred             CCcccchhhhhhHHHHhhCCCCCch----------HHHHHHh--hhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcch
Confidence            5679999999999999999977755          2233332  2234567788999999999999999999975     


Q ss_pred             HHHHhcCCCCCC
Q 039869          139 AKHVLAHPFPSV  150 (152)
Q Consensus       139 ~~~~l~h~~~~~  150 (152)
                      ..++++|+||+.
T Consensus       237 ~~eik~h~f~~~  248 (612)
T KOG0603|consen  237 VDEIKQHEFFQS  248 (612)
T ss_pred             hHHHhccchhee
Confidence            458899999975

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.50  E-value=8.9e-14  Score=95.42  Aligned_cols=132  Identities=17%  Similarity=0.188  Sum_probs=100.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhC--CCccCCCCCCCeeeecCCCchhHHHHHHH------------------HhhcCC--
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSH--GLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------QRHGLL--   62 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~--~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------~~~~~~--   62 (152)
                      .+..++.+++.+++.|++|||+.  -|.--.+.+..+++++.-..+ +.++|-.                  .....+  
T Consensus       286 vd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltar-ismad~kfsfqe~gr~y~pawmspealqrkped  364 (448)
T KOG0195|consen  286 VDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTAR-ISMADTKFSFQEVGRAYSPAWMSPEALQRKPED  364 (448)
T ss_pred             EecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhh-eecccceeeeeccccccCcccCCHHHHhcCchh
Confidence            34578999999999999999976  455667888889998652111 1112211                  111111  


Q ss_pred             -CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHH
Q 039869           63 -LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH  141 (152)
Q Consensus        63 -~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~  141 (152)
                       .-.+.|+|||.+++||+.|...||..-      .+.+...++........+|..++..+..++.-|++.||.+||.+..
T Consensus       365 ~n~raadmwsfaillwel~trevpfadl------spmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdm  438 (448)
T KOG0195|consen  365 LNIRAADMWSFAILLWELNTREVPFADL------SPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDM  438 (448)
T ss_pred             cchhhhhHHHHHHHHHHhhccccccccC------CchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcce
Confidence             135689999999999999999777654      7778888888888899999999999999999999999999999876


Q ss_pred             Hh
Q 039869          142 VL  143 (152)
Q Consensus       142 ~l  143 (152)
                      ++
T Consensus       439 iv  440 (448)
T KOG0195|consen  439 IV  440 (448)
T ss_pred             eh
Confidence            54

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.48  E-value=1.7e-13  Score=101.41  Aligned_cols=135  Identities=15%  Similarity=0.198  Sum_probs=99.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCC-ccCCCCCCCeeeecCCCchhHHHHHHHHhhcC---------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGL-VHCDIQGDNTLLVAGKDAHEAEISAFLQRHGL---------------------   61 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i-~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~---------------------   61 (152)
                      .++.-......++++.|++|||.--+ .|+.+++.|++++..   ..+++++||...-.                     
T Consensus        44 ~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~---w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aP  120 (484)
T KOG1023|consen   44 KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSR---WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAP  120 (484)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeee---EEEEechhhhcccccccccccccchhHHHHhccCH
Confidence            45667788899999999999997654 999999999999988   88888888721111                     


Q ss_pred             -------------CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC---CCCCC--CCCChhHHH
Q 039869           62 -------------LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE---VPEFP--SNISEDGRD  123 (152)
Q Consensus        62 -------------~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~  123 (152)
                                   ..+.+.|+||+|++++|+++.+.||.......  ...++...+.....   .|...  ....+++..
T Consensus       121 ellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~--~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~  198 (484)
T KOG1023|consen  121 ELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE--DPDEIILRVKKGGSNPFRPSIELLNELPPELLL  198 (484)
T ss_pred             HHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccC--ChHHHHHHHHhcCCCCcCcchhhhhhcchHHHH
Confidence                         12556899999999999999997775533211  22555555544222   22222  145557899


Q ss_pred             HHHHhhccccCCCcCHHHHh
Q 039869          124 FLSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       124 ll~~~l~~~p~~R~~~~~~l  143 (152)
                      ++..||..+|.+||++.++-
T Consensus       199 l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  199 LVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             HHHHhcccChhhCccHHHHH
Confidence            99999999999999998763

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.47  E-value=1.7e-13  Score=100.58  Aligned_cols=127  Identities=22%  Similarity=0.262  Sum_probs=92.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------------
Q 039869            6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------------   56 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------------   56 (152)
                      +....+.++.|++.|+.|   ++.+|+|+||.||....+   ..++++||+                             
T Consensus       357 s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d---~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Yms  430 (516)
T KOG1033|consen  357 SLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDD---DQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMS  430 (516)
T ss_pred             chhHHHHHHHhhccchhh---ccchhhhccccccccccc---hhhhhhhhhheeecccCCcccchhhhhhhcccccccCC
Confidence            456788899999999999   999999999999999777   678999998                             


Q ss_pred             --HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH--HHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           57 --QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL--IAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        57 --~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                        ...|..++.++|+||||++|+|+++...   .       ........  +..+..++.+..+. +.-..|+..++.+.
T Consensus       431 PEQi~g~~y~~kvdIyaLGlil~EL~~~f~---T-------~~er~~t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~  499 (516)
T KOG1033|consen  431 PEQIRGQQYSEKVDIYALGLILAELLIQFS---T-------QFERIATLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPS  499 (516)
T ss_pred             HHHHhhhhhhhhcchhhHHHHHHHHHHHhc---c-------HHHHHHhhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCC
Confidence              2234456789999999999999998321   1       22222222  22222222232333 34568999999999


Q ss_pred             cCCCcCHHHHhcCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~  149 (152)
                      |.+||++.+.-.|.|.+
T Consensus       500 p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  500 PEERPSAIEVALHEFLQ  516 (516)
T ss_pred             cccCchHHHHhhhhhcC
Confidence            99999877777777653

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.46  E-value=1e-12  Score=92.53  Aligned_cols=142  Identities=23%  Similarity=0.290  Sum_probs=98.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH---------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL---------------------------   56 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~---------------------------   56 (152)
                      .++...+..+..|++.++.++|+.+++|||+||+|++++....  .+++.|||                           
T Consensus        97 ~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~  174 (384)
T COG0515          97 PLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR--VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGY  174 (384)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC--eEEEeccCcceecCCCCcccccccccccccccccc
Confidence            5788999999999999999999999999999999999986631  34444444                           


Q ss_pred             ----Hhhc---CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC---CCCCCCC----ChhHH
Q 039869           57 ----QRHG---LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV---PEFPSNI----SEDGR  122 (152)
Q Consensus        57 ----~~~~---~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~  122 (152)
                          ...+   .......|+||+|+++++++++..|+......  .........+......   .......    .....
T Consensus       175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (384)
T COG0515         175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS--SATSQTLKIILELPTPSLASPLSPSNPELISKAAS  252 (384)
T ss_pred             CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc--ccHHHHHHHHHhcCCcccccccCccccchhhHHHH
Confidence                1112   34566799999999999999999774333210  0123333333322211   1111111    25789


Q ss_pred             HHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          123 DFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       123 ~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                      +++..++..+|..|.+..+...+++..
T Consensus       253 ~~~~~~~~~~~~~r~~~~~~~~~~~~~  279 (384)
T COG0515         253 DLLKKLLAKDPKNRLSSSSDLSHDLLA  279 (384)
T ss_pred             HHHHHHHhcCchhcCCHHHHhhchHhh
Confidence            999999999999999988877765543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.24  E-value=1.2e-11  Score=97.89  Aligned_cols=82  Identities=27%  Similarity=0.403  Sum_probs=70.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC----CCchhHHHHHHH---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG----KDAHEAEISAFL---------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~----~~~~~~~l~~~~---------------------   56 (152)
                      ++.+++..+..++.|++..|..||..+||||||||+|+++...    .....++|.|||                     
T Consensus       788 ~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td  867 (974)
T KOG1166|consen  788 NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTD  867 (974)
T ss_pred             CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccc
Confidence            4678899999999999999999999999999999999999532    123556788887                     


Q ss_pred             ------HhhcCCCCcchhHHHHHHHHHHHHhcC
Q 039869           57 ------QRHGLLLIYHVDTWALGRVFVEMMTAE   83 (152)
Q Consensus        57 ------~~~~~~~~~~~DvwslG~~l~~~~~~~   83 (152)
                            ...|.++++..|.|-++.++|-|+.|+
T Consensus       868 ~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  868 LFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             cchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence                  456777899999999999999999987

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.19  E-value=8e-12  Score=83.20  Aligned_cols=54  Identities=19%  Similarity=0.160  Sum_probs=47.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHH-HhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~l-h~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~   60 (152)
                      +++++..+..++.|++.+|.++ |+.|++||||||+||+++.    +.+++.|||....
T Consensus       112 ~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~----~~v~LiDFG~a~~  166 (190)
T cd05147         112 APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD----GKLYIIDVSQSVE  166 (190)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC----CcEEEEEcccccc
Confidence            5688899999999999999999 6999999999999999983    3578899986653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.13  E-value=5.8e-12  Score=85.66  Aligned_cols=64  Identities=16%  Similarity=0.184  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-------------cCCCCcchhHHHHHHHHHHH
Q 039869           13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-------------GLLLIYHVDTWALGRVFVEM   79 (152)
Q Consensus        13 i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-------------~~~~~~~~DvwslG~~l~~~   79 (152)
                      ...+++.++..+|+.|++|||++|+|++++.+   + +.+.||+...             ...+..+.|+|+||+.+.-+
T Consensus       140 ~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~---g-i~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        140 VKAKIKASIESLHQHGMVSGDPHKGNFIVSKN---G-LRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCChHHEEEeCC---C-EEEEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHH
Confidence            46699999999999999999999999999876   3 6777776222             22234679999999876544


Q ss_pred             H
Q 039869           80 M   80 (152)
Q Consensus        80 ~   80 (152)
                      .
T Consensus       216 ~  216 (232)
T PRK10359        216 K  216 (232)
T ss_pred             H
Confidence            3

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.11  E-value=4.7e-11  Score=80.02  Aligned_cols=77  Identities=21%  Similarity=0.322  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHhCCCccCCC-CCCCeeeecCCCchhHHHHHHHHhhcCC---------------------------
Q 039869           11 GRYTKDILRGLDHIHSHGLVHCDI-QGDNTLLVAGKDAHEAEISAFLQRHGLL---------------------------   62 (152)
Q Consensus        11 ~~i~~qi~~~l~~lh~~~i~h~dl-k~~Nil~~~~~~~~~~~l~~~~~~~~~~---------------------------   62 (152)
                      ..++.|++.+|.++|++|++|||| ||+||+++.+   +.++++||+...-..                           
T Consensus        94 ~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~---g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~  170 (218)
T PRK12274         94 LAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQED---GSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPA  170 (218)
T ss_pred             HHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCC---CCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCC
Confidence            467889999999999999999999 7999999866   445566665221000                           


Q ss_pred             -C-----------CcchhHH-HHHHHHHHHHhcCcccCCcc
Q 039869           63 -L-----------IYHVDTW-ALGRVFVEMMTAEISAWGSF   90 (152)
Q Consensus        63 -~-----------~~~~Dvw-slG~~l~~~~~~~~~~~~~~   90 (152)
                       .           +.-.-+| +.|+-+|.++|++.+.++..
T Consensus       171 ~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        171 ALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             CCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence             0           1123445 78999999999987777653

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.10  E-value=3.9e-11  Score=79.90  Aligned_cols=54  Identities=24%  Similarity=0.273  Sum_probs=47.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcC
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGL   61 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~   61 (152)
                      +++...+..++.|++.++.++|. .|++||||||+||+++ +   +.+++.|||.....
T Consensus       113 ~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~---~~~~liDFG~a~~~  167 (190)
T cd05145         113 PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-D---GKPYIIDVSQAVEL  167 (190)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-C---CCEEEEEcccceec
Confidence            56778999999999999999999 9999999999999998 4   56788898865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.03  E-value=2.8e-11  Score=92.91  Aligned_cols=141  Identities=22%  Similarity=0.249  Sum_probs=103.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCC------------------C-
Q 039869            4 GLPEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL------------------L-   63 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh-~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~------------------~-   63 (152)
                      ..+...+..+..|+..++.|+| ..++.|+|+||+|.+++.++.  ..++.+|+......                  + 
T Consensus       119 ~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~--~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~  196 (601)
T KOG0590|consen  119 GTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS--ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYG  196 (601)
T ss_pred             CCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC--cccCCCchhhccccccCCcceeeecccCCCCCCC
Confidence            3456778899999999999999 999999999999999987742  56667776221111                  1 


Q ss_pred             -----------CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           64 -----------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        64 -----------~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                                 ....|+||.|+++..+++|..|........    ......... ..........++....+++.+++..
T Consensus       197 a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~  272 (601)
T KOG0590|consen  197 APEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD----GRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKE  272 (601)
T ss_pred             CcccccchhhcCCCcccccccccccccccCCCCcccccccc----ccceeecccccccccCccccCChhhhhcccccccC
Confidence                       245899999999999999996554432211    111111111 1112345577888999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~  150 (152)
                      +|+.|.+.+++..++|+..
T Consensus       273 ~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  273 NPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             Cchhccccccccccccccc
Confidence            9999999999999999865

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=5.3e-11  Score=90.36  Aligned_cols=131  Identities=21%  Similarity=0.230  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHH-hCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------------------h
Q 039869           15 KDILRGLDHIH-SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------------------H   59 (152)
Q Consensus        15 ~qi~~~l~~lh-~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------------------~   59 (152)
                      .+++.|+.|+| +.++||++|.|++|.++.+   +.+++..|...                                  .
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~---~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNAN---GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccC---cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            34558999999 5699999999999999988   77777776521                                  1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      +.....++|++|+|+++|.+..+..+.........  .... ......-........++.++.+=+.+++..++..||++
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~--~~~~-~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~  259 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL--SYSF-SRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL  259 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcc--hhhh-hhcccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence            22225679999999999988854434332211000  0001 00111111122347789999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q 039869          140 KHVLAHPFPSVD  151 (152)
Q Consensus       140 ~~~l~h~~~~~~  151 (152)
                      ..++..+||++.
T Consensus       260 ~~l~~~~ff~D~  271 (700)
T KOG2137|consen  260 DLLLSIPFFSDP  271 (700)
T ss_pred             hhhhcccccCCc
Confidence            999999999864

>smart00090 RIO RIO-like kinase

Probab=98.92  E-value=1.4e-09  Score=74.82  Aligned_cols=52  Identities=27%  Similarity=0.253  Sum_probs=44.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC-CccCCCCCCCeeeecCCCchhHHHHHHHHhh
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHG-LVHCDIQGDNTLLVAGKDAHEAEISAFLQRH   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~-i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~   59 (152)
                      ++...++..++.|++.++++||..| ++|+|+||+||+++ +   ..+++.||+...
T Consensus       144 ~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~---~~i~LiDFg~a~  196 (237)
T smart00090      144 EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-D---GKVVIIDVSQSV  196 (237)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-C---CCEEEEEChhhh
Confidence            3556678899999999999999999 99999999999998 4   456777887554

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.87  E-value=6.7e-10  Score=80.62  Aligned_cols=46  Identities=24%  Similarity=0.378  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHhCCCccCCC-CCCCeeeecCCCchhHHHHHHHHhh
Q 039869           11 GRYTKDILRGLDHIHSHGLVHCDI-QGDNTLLVAGKDAHEAEISAFLQRH   59 (152)
Q Consensus        11 ~~i~~qi~~~l~~lh~~~i~h~dl-k~~Nil~~~~~~~~~~~l~~~~~~~   59 (152)
                      ..++.|++.+|.+||+.||+|||| ||+||+++.+   +.++++|||...
T Consensus       114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~---~~ikLiDFGlA~  160 (365)
T PRK09188        114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPD---GEAAVIDFQLAS  160 (365)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCC---CCEEEEECccce
Confidence            568899999999999999999999 9999999766   567889988544

>PRK10345 hypothetical protein; Provisional

Probab=98.74  E-value=3e-09  Score=71.81  Aligned_cols=49  Identities=12%  Similarity=0.112  Sum_probs=37.4

Q ss_pred             CCHHHHHHHHHHHHHHH-HHHHhCCCccCCCCCCCeeeecCC-CchhHHHHHH
Q 039869            5 LPEHEIGRYTKDILRGL-DHIHSHGLVHCDIQGDNTLLVAGK-DAHEAEISAF   55 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l-~~lh~~~i~h~dlk~~Nil~~~~~-~~~~~~l~~~   55 (152)
                      +++.  ..++.|++.++ +|||+++|+||||||+||+++.+. ....+++.|+
T Consensus       103 ~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345        103 YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            4444  35678888888 899999999999999999997543 2235677773

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=9.4e-09  Score=72.71  Aligned_cols=133  Identities=20%  Similarity=0.248  Sum_probs=86.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC--CCccCCCCCCCeeeecCCCchhHHHHHH---------------HH-----hhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH--GLVHCDIQGDNTLLVAGKDAHEAEISAF---------------LQ-----RHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~--~i~h~dlk~~Nil~~~~~~~~~~~l~~~---------------~~-----~~~   60 (152)
                      +.+....-.+++.||+.||.|||+.  -++|+++.-+.+.+..+   +.++++.-               ..     ..|
T Consensus       171 ~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~n---gLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g  247 (458)
T KOG1266|consen  171 KALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHN---GLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPG  247 (458)
T ss_pred             hhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCC---ceEEecccCccccchhhhhhhHhhhhccccCCc
Confidence            3456777889999999999999987  69999999998888655   33333211               11     011


Q ss_pred             CC---------CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           61 LL---------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        61 ~~---------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                      +.         ....+|||++|....++..+....-.....  ....+....+..        ......-++++.+|+..
T Consensus       248 ~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~--~~~ee~ia~~i~--------~len~lqr~~i~kcl~~  317 (458)
T KOG1266|consen  248 FSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESK--VEVEENIANVII--------GLENGLQRGSITKCLEG  317 (458)
T ss_pred             cccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcce--eehhhhhhhhee--------eccCccccCcCcccccC
Confidence            11         145689999999999998876433222110  011111111111        11223345778999999


Q ss_pred             ccCCCcCHHHHhcCCCC
Q 039869          132 VHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~  148 (152)
                      .|+.||++..++.||..
T Consensus       318 eP~~rp~ar~llfHpll  334 (458)
T KOG1266|consen  318 EPNGRPDARLLLFHPLL  334 (458)
T ss_pred             CCCCCcchhhhhcCcee
Confidence            99999999999999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.71  E-value=1.2e-08  Score=81.09  Aligned_cols=139  Identities=21%  Similarity=0.221  Sum_probs=103.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH---------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL---------------------------   56 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~---------------------------   56 (152)
                      +.++.-++.+...++.++++||...+.|+|++|.|.++...   +...+.+++                           
T Consensus       900 ~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~---gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~  976 (1205)
T KOG0606|consen  900 CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYD---GHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLS  976 (1205)
T ss_pred             CcccccccchhHHHHhhhhccccchhhcccccccchhhccc---CCcccCccccccccccccCcCCcccccccCcccccc
Confidence            45667788888899999999999999999999999998654   222333321                           


Q ss_pred             -----------------------------HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc
Q 039869           57 -----------------------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS  107 (152)
Q Consensus        57 -----------------------------~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (152)
                                                   ...|.......|.|+.|+++++.++|.+||-..      ....+.+.+..+
T Consensus       977 ~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~------tpq~~f~ni~~~ 1050 (1205)
T KOG0606|consen  977 RSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE------TPQQIFENILNR 1050 (1205)
T ss_pred             ccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc------chhhhhhccccC
Confidence                                         011111134589999999999999999777665      445555554433


Q ss_pred             C-CCCCCCCCCChhHHHHHHHhhccccCCCcCHH---HHhcCCCCCCC
Q 039869          108 S-EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK---HVLAHPFPSVD  151 (152)
Q Consensus       108 ~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~---~~l~h~~~~~~  151 (152)
                      . ..+.-+...+.++.+++...+..+|.+|..+.   ++-.|+||+..
T Consensus      1051 ~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1051 DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             CCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence            3 33455677889999999999999999998877   88899999874

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.66  E-value=7.7e-09  Score=71.28  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh
Q 039869           13 YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH   59 (152)
Q Consensus        13 i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~   59 (152)
                      .+.|++.+|.+||++||+|+||||+||+++.+   ..+.+.||+...
T Consensus       147 ~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~---~~v~LIDfg~~~  190 (239)
T PRK01723        147 QWQAIGQLIARFHDAGVYHADLNAHNILLDPD---GKFWLIDFDRGE  190 (239)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCC---CCEEEEECCCcc
Confidence            36789999999999999999999999999876   456777877443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.64  E-value=1.2e-08  Score=68.34  Aligned_cols=52  Identities=19%  Similarity=0.209  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCC
Q 039869            8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL   62 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~   62 (152)
                      .....++.+++.++.++|+.|++|+||+|+||+++.+   +.++++|||......
T Consensus       125 ~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~---~~~~liDfg~~~~~~  176 (198)
T cd05144         125 EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDD---EKIYIIDWPQMVSTD  176 (198)
T ss_pred             ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCC---CcEEEEECCccccCC
Confidence            4466789999999999999999999999999999876   677788888554433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.59  E-value=1.6e-08  Score=66.91  Aligned_cols=49  Identities=22%  Similarity=0.211  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc
Q 039869            8 HEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG   60 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~   60 (152)
                      .+++.++.+++.++.++|. .+++|+|+||+||+++ +   +.+.+.||+....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~---~~~~liDfg~a~~  163 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D---GKVYIIDVPQAVE  163 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C---CcEEEEECccccc
Confidence            5678999999999999999 9999999999999998 4   5667788875543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.51  E-value=4.7e-08  Score=73.28  Aligned_cols=136  Identities=23%  Similarity=0.225  Sum_probs=98.3

Q ss_pred             CCHHHHHHHHHHHHH----HHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------
Q 039869            5 LPEHEIGRYTKDILR----GLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------   57 (152)
Q Consensus         5 l~~~~~~~i~~qi~~----~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------   57 (152)
                      ++...++.+..+...    ||.++|..+++|-|+||+|+....+.  +.+++++|+.                       
T Consensus       215 ~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~--~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~  292 (524)
T KOG0601|consen  215 LPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDW--TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDC  292 (524)
T ss_pred             CCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccc--ceeecCCcceeEEccCCccccceeeeecCCCCc
Confidence            567888999999999    99999999999999999999997553  4445555541                       


Q ss_pred             ------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           58 ------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        58 ------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                            .....+....|++++|-++.+...+...+.....   ..+..+    ..+..+.++....+.++...+..++..
T Consensus       293 ~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~---~~W~~~----r~~~ip~e~~~~~s~~l~~~~~~~~d~  365 (524)
T KOG0601|consen  293 IYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN---SSWSQL----RQGYIPLEFCEGGSSSLRSVTSQMLDE  365 (524)
T ss_pred             eEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC---CCcccc----ccccCchhhhcCcchhhhhHHHHhcCc
Confidence                  1112235678999999999988887645543310   011111    112234455566777788899999999


Q ss_pred             ccCCCcCHHHHhcCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~  149 (152)
                      +|-.|++++.+..|+++.
T Consensus       366 ~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  366 DPRLRLTAQILTALNVIH  383 (524)
T ss_pred             chhhhhHHHHHhcccccc
Confidence            999999999999998875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.46  E-value=6.3e-08  Score=64.70  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869           12 RYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus        12 ~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      .++.+++.+|.++|+.|++|+|++|+|++++ +   ..+.+.||+..
T Consensus        94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~---~~~~liDfg~a  136 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-D---DKLYLIDFGLG  136 (199)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-C---CcEEEEECCCC
Confidence            7899999999999999999999999999998 4   45667787743

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.45  E-value=7.8e-08  Score=64.79  Aligned_cols=46  Identities=26%  Similarity=0.384  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869            9 EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus         9 ~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      ....++.+++.+|.++|..+++|+|++|+||+++ +   ..+.+.||+..
T Consensus        96 ~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~---~~~~liDf~~a  141 (211)
T PRK14879         96 EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-G---GKIYLIDFGLA  141 (211)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-C---CCEEEEECCcc
Confidence            4568999999999999999999999999999998 4   45567787744

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.45  E-value=3.4e-07  Score=70.01  Aligned_cols=75  Identities=20%  Similarity=0.346  Sum_probs=60.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh---cCC-------------------
Q 039869            6 PEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---GLL-------------------   62 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh-~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---~~~-------------------   62 (152)
                      ....+...+.||+.||.||| +++++|+++.-+.++++..   +.++++++....   +..                   
T Consensus       102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~---GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~  178 (690)
T KOG1243|consen  102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNES---GEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID  178 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCC---CcEEEeeeEEEeccccCCcccccchhhhcccChhhcC
Confidence            35678889999999999998 7799999999999999888   788888776331   111                   


Q ss_pred             -CCcchhHHHHHHHHHHHHhcC
Q 039869           63 -LIYHVDTWALGRVFVEMMTAE   83 (152)
Q Consensus        63 -~~~~~DvwslG~~l~~~~~~~   83 (152)
                       .....|.|-|||++++++.|.
T Consensus       179 ~s~~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  179 PSEWSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             ccccchhhhhHHHHHHHHhCcc
Confidence             012459999999999999983

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.44  E-value=6.6e-08  Score=73.97  Aligned_cols=46  Identities=15%  Similarity=0.221  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh
Q 039869           10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH   59 (152)
Q Consensus        10 ~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~   59 (152)
                      ...++.|++.+|.+||+.+++|||+||+||+++ +   ..+++.||+...
T Consensus       430 ~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~---~~~~liDFGla~  475 (535)
T PRK09605        430 NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-D---DRLYLIDFGLGK  475 (535)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-C---CcEEEEeCcccc
Confidence            577899999999999999999999999999994 4   456788888654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.37  E-value=4e-06  Score=61.74  Aligned_cols=138  Identities=15%  Similarity=0.130  Sum_probs=90.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHH--------------------------HH
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF--------------------------LQ   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~--------------------------~~   57 (152)
                      .++++.++..++.++.+.+-||..|..-||+.++|+|++..+.+..+.--+|                          +.
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~s  192 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPS  192 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhcccc
Confidence            4678899999999999999999999999999999999976643332221111                          13


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhc-CcccCCccCCCCCC-hHH--HH-----HHHHhcCC----CCCCC-CCCChhHHH
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTA-EISAWGSFGRGLAS-RDD--LL-----ELIAFSSE----VPEFP-SNISEDGRD  123 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~-~~~~~~~~~~~~~~-~~~--~~-----~~~~~~~~----~~~~~-~~~~~~~~~  123 (152)
                      +.|...+...|.+-||+++++++.| +-||.+........ +.+  +.     .....+..    +...| ..+++++..
T Consensus       193 f~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqA  272 (637)
T COG4248         193 FVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQA  272 (637)
T ss_pred             ccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHH
Confidence            4455556778999999999999987 55665543332211 111  10     01111111    11122 336788888


Q ss_pred             HHHHhhccc--cCCCcCHHH
Q 039869          124 FLSKCFIRV--HQLRWTAKH  141 (152)
Q Consensus       124 ll~~~l~~~--p~~R~~~~~  141 (152)
                      +...|+..-  +.-||+++.
T Consensus       273 lF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         273 LFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             HHHHHhcccCCCCCCCCHHH
Confidence            888888753  557998763

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.19  E-value=1.5e-06  Score=54.77  Aligned_cols=63  Identities=19%  Similarity=0.205  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhC---CCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHH
Q 039869            7 EHEIGRYTKDILRGLDHIHSH---GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFV   77 (152)
Q Consensus         7 ~~~~~~i~~qi~~~l~~lh~~---~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~   77 (152)
                      ......++.+++.+++.+|..   +++|+|++|+|++++..   ..+.+.||+....     ....+.++.+++
T Consensus        85 ~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~---~~~~l~Df~~~~~-----~~~~~d~~~~~~  150 (155)
T cd05120          85 EEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG---KILGIIDWEYAGY-----GPPAFDLAAALL  150 (155)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC---cEEEEEecccccC-----CChHHHHHHHHH
Confidence            467788999999999999984   79999999999999875   5667778764432     123455555544

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.17  E-value=7.3e-07  Score=59.58  Aligned_cols=51  Identities=22%  Similarity=0.263  Sum_probs=41.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHH-HhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh
Q 039869            5 LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH   59 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~l-h~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~   59 (152)
                      +++.++..+..+++.++..+ |..|++|+|+++.||++..+    .+.+.||+...
T Consensus       121 ~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~~----~v~iIDF~qav  172 (197)
T cd05146         121 LNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHDG----KVWFIDVSQSV  172 (197)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEECC----cEEEEECCCce
Confidence            44556778889999999988 89999999999999999743    46677877443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.15  E-value=2e-06  Score=58.02  Aligned_cols=55  Identities=15%  Similarity=0.211  Sum_probs=44.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH   59 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~   59 (152)
                      .+......++.+++..++-||++|++|+|+++.|||++.......+.+.|+....
T Consensus       115 ~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~  169 (206)
T PF06293_consen  115 LDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR  169 (206)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence            4566778999999999999999999999999999999877433456677776443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.10  E-value=1e-06  Score=66.32  Aligned_cols=132  Identities=20%  Similarity=0.172  Sum_probs=90.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc-----------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG-----------------------   60 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~-----------------------   60 (152)
                      .+++...+.+..|++.++.++|+..++|.|++|+||++..++  ....+++++...+                       
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e  439 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLE  439 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch--hhhhccccccccccceecccccccccccccchhhcc
Confidence            356788899999999999999999999999999999997643  3344555542211                       


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                       ..+-.+.|++|+|.-+.+.+++....+...     ....+.     ....+.. ......+..+.+.+...++..|+.+
T Consensus       440 ~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-----~~~~i~-----~~~~p~~-~~~~~~~q~~~kv~~~~~~~~~~l~  508 (524)
T KOG0601|consen  440 DYPHLSKADIFSLGLSVDEAITGSPLSESGV-----QSLTIR-----SGDTPNL-PGLKLQLQVLLKVMINPDRKRRPSA  508 (524)
T ss_pred             ccccccccccccccccccccccCcccCcccc-----cceeee-----cccccCC-CchHHhhhhhhhhhcCCccccchhh
Confidence             111346899999998888888874433321     111111     1112222 3334778888899999999999998


Q ss_pred             HHHhcCCCC
Q 039869          140 KHVLAHPFP  148 (152)
Q Consensus       140 ~~~l~h~~~  148 (152)
                      .++..|+=|
T Consensus       509 ~~l~~~~~~  517 (524)
T KOG0601|consen  509 VELSLHSEF  517 (524)
T ss_pred             hhhcccchh
Confidence            888776543

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.08  E-value=2.4e-06  Score=59.90  Aligned_cols=54  Identities=13%  Similarity=0.076  Sum_probs=42.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC----CCchhHHHHHHHHh
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG----KDAHEAEISAFLQR   58 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~----~~~~~~~l~~~~~~   58 (152)
                      .+......++.+++..+..||.+|++|+|+++.||+++..    .....+.+.|++..
T Consensus       135 ~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~  192 (268)
T PRK15123        135 PDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA  192 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence            4456777899999999999999999999999999999751    22244566777644

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.98  E-value=4.2e-06  Score=55.14  Aligned_cols=60  Identities=17%  Similarity=0.176  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcC--CCCcchhHH
Q 039869           11 GRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGL--LLIYHVDTW   70 (152)
Q Consensus        11 ~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~--~~~~~~Dvw   70 (152)
                      ...++.|-..+.-||.++++||||..+|+++...+....+.+.||+.....  +-+..+|+|
T Consensus       116 ~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~EDKgVDLY  177 (229)
T KOG3087|consen  116 AELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLPEDKGVDLY  177 (229)
T ss_pred             HHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcccCcccccceee
Confidence            678888888999999999999999999999988776677678888854432  224556665

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.98  E-value=7.4e-06  Score=53.15  Aligned_cols=58  Identities=21%  Similarity=0.155  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHhCCC-----ccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHH
Q 039869           11 GRYTKDILRGLDHIHSHGL-----VHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFV   77 (152)
Q Consensus        11 ~~i~~qi~~~l~~lh~~~i-----~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~   77 (152)
                      ..+..+++.+|+.||..++     +|+|++|.|++++ +   +.+.+.||+.....     .-.|-++.++.
T Consensus        86 ~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~---~~~~liDf~~a~~~-----~~~~Dla~~~~  148 (170)
T cd05151          86 PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-D---GRLWLIDWEYAGMN-----DPLFDLANFFS  148 (170)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-C---CeEEEEecccccCC-----ChHHHHHHHHH
Confidence            4567899999999999885     9999999999998 3   34568887754321     22455665544

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.91  E-value=7.2e-05  Score=56.46  Aligned_cols=125  Identities=18%  Similarity=0.137  Sum_probs=81.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----hhc-CCC--CcchhHHHHH
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----RHG-LLL--IYHVDTWALG   73 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----~~~-~~~--~~~~DvwslG   73 (152)
                      +...+|..+|.|+.|+..||.++|+.|+.-+-|.|.+|++..+   ..+.+...+.     ... .+.  ..+.|.-.||
T Consensus       387 ~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~---~RIriS~C~i~Dvl~~d~~~~le~~Qq~D~~~lG  463 (655)
T KOG3741|consen  387 NLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGK---MRIRISGCGIMDVLQEDPTEPLESQQQNDLRDLG  463 (655)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCc---ceEEEecccceeeecCCCCcchhHHhhhhHHHHH
Confidence            3457899999999999999999999999999999999999755   2333333321     111 111  2457999999


Q ss_pred             HHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHh
Q 039869           74 RVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus        74 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l  143 (152)
                      .++..+.+|..--+-..    .......+.         +-..++.++++++.-+....++. -++.+++
T Consensus       464 ~ll~aLAt~~~ns~~~d----~~~~s~~~~---------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~ll  519 (655)
T KOG3741|consen  464 LLLLALATGTENSNRTD----STQSSHLTR---------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLL  519 (655)
T ss_pred             HHHHHHhhccccccccc----chHHHHHHH---------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHH
Confidence            99999999962111110    011111111         12346777777777777777765 3555554

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.84  E-value=7.7e-06  Score=53.87  Aligned_cols=42  Identities=24%  Similarity=0.398  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           12 RYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        12 ~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      .+++.+=.-+.-||.+||+|+|+.++|+++...    .+.+.|||.
T Consensus        96 ~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~----~i~~IDfGL  137 (204)
T COG3642          96 DLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG----RIYFIDFGL  137 (204)
T ss_pred             HHHHHHHHHHHHHHhcCeecCCCccceEEEeCC----cEEEEECCc
Confidence            467777778889999999999999999999865    266777774

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.68  E-value=0.00017  Score=54.17  Aligned_cols=47  Identities=15%  Similarity=0.232  Sum_probs=36.8

Q ss_pred             HHHHHHHHH-HHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc
Q 039869           11 GRYTKDILR-GLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG   60 (152)
Q Consensus        11 ~~i~~qi~~-~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~   60 (152)
                      ..++.+++. .+..+|..|++|+|++|.||+++.+   +.+.+.|||....
T Consensus       259 ~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~---g~i~liDfG~~~~  306 (437)
T TIGR01982       259 KALAENLARSFLNQVLRDGFFHADLHPGNIFVLKD---GKIIALDFGIVGR  306 (437)
T ss_pred             HHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCC---CcEEEEeCCCeeE
Confidence            346666655 4678999999999999999999877   5677888885543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.52  E-value=0.00029  Score=57.81  Aligned_cols=129  Identities=22%  Similarity=0.273  Sum_probs=79.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCC---CeeeecCCCchhHHHH--HHHHh-------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGD---NTLLVAGKDAHEAEIS--AFLQR-------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~---Nil~~~~~~~~~~~l~--~~~~~-------------------   58 (152)
                      +..+...++.+..+.++|++++|+..+.|.-+.-+   +-..+..   ..+.++  ++...                   
T Consensus       281 ~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e---~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~  357 (1351)
T KOG1035|consen  281 GSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGE---GVVAISLSDFDSSKPLPDNEKSFSDLLAEIRN  357 (1351)
T ss_pred             cccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCcc---ceeecchhhhcccccCCCcccchhhcCccccc
Confidence            35678889999999999999999885544433322   1111111   111111  22210                   


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                             .....+...|+|.+|.....+..+..+.-...                 .....++........+.+.+|+.-
T Consensus       358 ~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~-----------------~~~~~l~~~~~~~~~d~~~~~~~~  420 (1351)
T KOG1035|consen  358 ADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA-----------------VPVSLLDVLSTSELLDALPKCLDE  420 (1351)
T ss_pred             cccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc-----------------chhhhhccccchhhhhhhhhhcch
Confidence                   11111345799999999888888762221110                 001112222223678889999999


Q ss_pred             ccCCCcCHHHHhcCCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ++++|+.+.+++.|+|.+-+
T Consensus       421 ~~~~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  421 DSEERLSALELLTHPFLRFP  440 (1351)
T ss_pred             hhhhccchhhhhhchhcccc
Confidence            99999999999999998754

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.34  E-value=8.4e-05  Score=49.44  Aligned_cols=49  Identities=29%  Similarity=0.377  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHHHHH-HHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc
Q 039869            8 HEIGRYTKDILRGLDH-IHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG   60 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~-lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~   60 (152)
                      .....++.+++..+.. +|..|++|||+.+.||+++.+    .+.+.||+....
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~----~~~iIDf~qav~  155 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG----KVYIIDFGQAVD  155 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT----CEEE--GTTEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc----eEEEEecCccee
Confidence            3566788888885555 579999999999999999865    567788875443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=97.32  E-value=0.00018  Score=48.61  Aligned_cols=53  Identities=11%  Similarity=0.037  Sum_probs=42.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      .++.+-..+..+++..++-||+.|+.|+|+-+.||+++..+. -.+.++|++..
T Consensus       125 ~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~-~~v~lIDlEk~  177 (216)
T PRK09902        125 YSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGK-AEAGFLDLEKS  177 (216)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCC-eeEEEEEhhcc
Confidence            355666799999999999999999999999999999985532 23667777633

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.18  E-value=0.00068  Score=46.17  Aligned_cols=41  Identities=22%  Similarity=0.366  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           12 RYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        12 ~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      .++..++.++..+|..|+.|+|..|.|+++..+    .+.+.|++
T Consensus       139 ~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~----~i~iID~~  179 (229)
T PF06176_consen  139 DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN----GIRIIDTQ  179 (229)
T ss_pred             HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC----cEEEEECc
Confidence            355678888999999999999999999999865    24555554

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.09  E-value=0.00068  Score=52.10  Aligned_cols=37  Identities=14%  Similarity=0.188  Sum_probs=27.9

Q ss_pred             HHHhCCCccCCCCCCCeeeecCC-CchhHHHHHHHHhh
Q 039869           23 HIHSHGLVHCDIQGDNTLLVAGK-DAHEAEISAFLQRH   59 (152)
Q Consensus        23 ~lh~~~i~h~dlk~~Nil~~~~~-~~~~~~l~~~~~~~   59 (152)
                      .+...|++|+|++|.||+++.++ ..+.+.+.|||...
T Consensus       275 Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg  312 (537)
T PRK04750        275 QVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVG  312 (537)
T ss_pred             HHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence            34568999999999999998662 22367788888553

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.93  E-value=0.0056  Score=41.20  Aligned_cols=29  Identities=24%  Similarity=0.336  Sum_probs=20.3

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      .++|+|+++.|++++.+ ..+.+.+.||+.
T Consensus       175 ~l~HgD~~~~Nil~~~~-~~~~~~iID~e~  203 (223)
T cd05154         175 GLVHGDYRLGNVLFHPD-EPRVVAVLDWEL  203 (223)
T ss_pred             EEEECCCCcccEEEcCC-CCcEEEEEeccc
Confidence            46999999999999863 113455666653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.48  E-value=0.0076  Score=42.43  Aligned_cols=48  Identities=17%  Similarity=0.223  Sum_probs=38.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869            6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      +...+..+...|++-+.-+-..|++|+|+.+=||+++.+   +.+.+.|+-
T Consensus       200 ~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~d---g~~~vIDwP  247 (304)
T COG0478         200 DVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTED---GDIVVIDWP  247 (304)
T ss_pred             cccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecC---CCEEEEeCc
Confidence            356677788888888888889999999999999999987   555666654

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=94.45  E-value=0.023  Score=43.69  Aligned_cols=79  Identities=14%  Similarity=0.174  Sum_probs=50.1

Q ss_pred             cchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHhcCCCC---------CCCCCCChhHHHHHHHhhccccC
Q 039869           65 YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAFSSEVP---------EFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        65 ~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                      .++||||+|.++.++.-|...+...      ...+.... ........         .+...++....+++.+|+...|.
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~------~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~  183 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAEL------TESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPI  183 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHH------HHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccc
Confidence            5899999999999998876333211      11111111 11111110         11234667788999999999999


Q ss_pred             CCcCHHHHhcCCCCC
Q 039869          135 LRWTAKHVLAHPFPS  149 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~  149 (152)
                      .||...++.+++-|.
T Consensus       184 ir~l~~~~~k~~i~~  198 (725)
T KOG1093|consen  184 IRPLPMELSKRCSFT  198 (725)
T ss_pred             cccchhHHhcCccHH
Confidence            999888888877654

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.21  E-value=0.03  Score=37.35  Aligned_cols=43  Identities=16%  Similarity=0.214  Sum_probs=37.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHh---CCCccCCCCCCCeeeecCCCch
Q 039869            6 PEHEIGRYTKDILRGLDHIHS---HGLVHCDIQGDNTLLVAGKDAH   48 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh~---~~i~h~dlk~~Nil~~~~~~~~   48 (152)
                      ++.....||.+++..+.+|+.   ..+...|++++|+.++.+++.+
T Consensus        57 ~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk  102 (188)
T PF12260_consen   57 PWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLK  102 (188)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEE
Confidence            688999999999999999997   4688899999999998774433

Proteins in this uncharacterised family are described as transmembrane proteins.

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.63  E-value=0.18  Score=36.94  Aligned_cols=37  Identities=22%  Similarity=0.193  Sum_probs=25.6

Q ss_pred             HHHHHHHHHHHHHHHHHHh----CCCccCCCCCCCeeeecC
Q 039869            8 HEIGRYTKDILRGLDHIHS----HGLVHCDIQGDNTLLVAG   44 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~----~~i~h~dlk~~Nil~~~~   44 (152)
                      +-++.+..||+.-.-.+-+    .+.+|-||||+|||+-.+
T Consensus       279 ~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        279 EYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            4567777787654323322    378999999999999443

>PRK05231 homoserine kinase; Provisional

Probab=92.24  E-value=0.12  Score=37.04  Aligned_cols=28  Identities=25%  Similarity=0.443  Sum_probs=21.5

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      .+++|+|+++.|++++.+   +...+.||+.
T Consensus       187 ~~liHgD~~~~Nil~~~~---~~~~iIDf~~  214 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGD---RLSGFIDFYF  214 (319)
T ss_pred             cccCCCCCCCCcEEEECC---ceEEEEeccc
Confidence            489999999999999855   3345667653

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=92.03  E-value=0.043  Score=37.67  Aligned_cols=28  Identities=21%  Similarity=0.216  Sum_probs=21.0

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      .+++|+|+.+.|++++.+   +...+.||+.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~---~i~giIDw~~  191 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDG---RLSAVIDFGC  191 (235)
T ss_pred             ceEEeCCCCCCcEEEECC---CEEEEEeCcc
Confidence            358999999999999865   3344666663

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=92.00  E-value=0.087  Score=36.00  Aligned_cols=47  Identities=13%  Similarity=0.125  Sum_probs=30.2

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMM   80 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~~   80 (152)
                      .+++|+|+.+.||+++.+.  +.+.+.|+....-.     .=.|-+|.++.|+.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~--~~~~lIDwe~a~~~-----~~~~Dla~~~~e~~  216 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEK--NSVKFIDYEYAGYN-----YRAFDIANHFNEWA  216 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCC--CCEEEEEcccCCcC-----chheeHHHHHHHHc
Confidence            3689999999999998621  34667777633211     12345676666654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=91.82  E-value=0.12  Score=36.96  Aligned_cols=28  Identities=25%  Similarity=0.432  Sum_probs=22.1

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      .+++|+|+++.|++++.+   +...+.||+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~---~~~~vIDfd~  214 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGD---SVKGVIDFYF  214 (307)
T ss_pred             CccCCCCCCcCcEEEECC---ceEEEeeccc
Confidence            589999999999999876   4445667653

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=91.43  E-value=0.51  Score=33.09  Aligned_cols=49  Identities=29%  Similarity=0.339  Sum_probs=38.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869            5 LPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      +...++..+..+++..+.-|-. .++||+||..=|||+..+    .+.++|++.
T Consensus       163 ~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~----~p~iID~~Q  212 (268)
T COG1718         163 LELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDG----EPYIIDVSQ  212 (268)
T ss_pred             cCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECC----eEEEEECcc
Confidence            3444788889999999998886 899999999999999833    445555553

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=91.22  E-value=0.18  Score=35.71  Aligned_cols=29  Identities=24%  Similarity=0.431  Sum_probs=22.7

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      .+++|+|+.|.|++++.+   +.+.+.||+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~---~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGD---ELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCC---ceEEEeehhhh
Confidence            479999999999999876   44457777644

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=91.09  E-value=0.091  Score=36.35  Aligned_cols=36  Identities=19%  Similarity=0.171  Sum_probs=27.6

Q ss_pred             HHHHHHHHhC--CCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           18 LRGLDHIHSH--GLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        18 ~~~l~~lh~~--~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      +..|...|+.  +.+|||-.|+||+-+..   +.+|+-|++
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~---G~lKlVDP~  188 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKF---GYLKLVDPV  188 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCC---CCEEecChh
Confidence            3567788843  79999999999999998   455555554

The function of this family is unknown.

>PRK12396 5-methylribose kinase; Reviewed

Probab=90.35  E-value=0.29  Score=36.66  Aligned_cols=46  Identities=13%  Similarity=0.232  Sum_probs=29.0

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHh
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMT   81 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~~~   81 (152)
                      ..++|||+.|.||+++.+    ..++.|++.....+.     -|-+|.++..++.
T Consensus       227 ~aLlHGDlHtGSI~v~~~----~~kvIDpEFAfyGP~-----gFDiG~~lanll~  272 (409)
T PRK12396        227 QALIHGDLHTGSVFVKND----STKVIDPEFAFYGPM-----GYDIGNVMANLMF  272 (409)
T ss_pred             hhhccCcCCCCCEEecCC----ceEEEcccccccCCc-----HHHHHHHHHHHHH
Confidence            478999999999999865    345666554332221     2445666555543

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=90.15  E-value=0.35  Score=34.21  Aligned_cols=65  Identities=15%  Similarity=0.166  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHHhC--CCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHh
Q 039869            9 EIGRYTKDILRGLDHIHSH--GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMT   81 (152)
Q Consensus         9 ~~~~i~~qi~~~l~~lh~~--~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~~~   81 (152)
                      .+...+..+-.++.-.+..  -++|+|+.|+|++.+..   +.+.+.|++...-     ..-+|-+|.++.+-..
T Consensus       133 ~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~---~~l~LIDWEyAg~-----~D~~~DLA~~~~e~~~  199 (269)
T COG0510         133 LLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDK---GGLFLIDWEYAGL-----NDPAFDLAALLSEYIF  199 (269)
T ss_pred             HHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCC---CcEEEEecccCCC-----ccHHHHHHHHHHHhcc
Confidence            3444555555566655544  68999999999999874   4667777763321     1234566666666554

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=89.58  E-value=0.15  Score=37.41  Aligned_cols=37  Identities=19%  Similarity=0.178  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHHH----hCCCccCCCCCCCeeeecC
Q 039869            8 HEIGRYTKDILRGLDHIH----SHGLVHCDIQGDNTLLVAG   44 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh----~~~i~h~dlk~~Nil~~~~   44 (152)
                      +-++.+..||+.-.--+-    ..+.+|-||||+|||+-.+
T Consensus       275 ~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  315 (434)
T PF05445_consen  275 EYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDS  315 (434)
T ss_pred             HHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecC
Confidence            345566666643221121    2378999999999999443

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=89.31  E-value=3.3  Score=32.30  Aligned_cols=34  Identities=18%  Similarity=0.213  Sum_probs=26.8

Q ss_pred             HHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh
Q 039869           23 HIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH   59 (152)
Q Consensus        23 ~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~   59 (152)
                      .+-..|++|.|.+|.|+++...   +.+.+.|||...
T Consensus       280 q~~~dgffHaDpHpGNi~v~~~---g~i~~lDfGi~g  313 (517)
T COG0661         280 QLLRDGFFHADPHPGNILVRSD---GRIVLLDFGIVG  313 (517)
T ss_pred             HHHhcCccccCCCccceEEecC---CcEEEEcCccee
Confidence            4445899999999999999887   666677777543

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=88.71  E-value=0.11  Score=35.11  Aligned_cols=29  Identities=24%  Similarity=0.289  Sum_probs=17.5

Q ss_pred             CCCccCCCCCCCeeee-cCCCchhHHHHHHHHh
Q 039869           27 HGLVHCDIQGDNTLLV-AGKDAHEAEISAFLQR   58 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~-~~~~~~~~~l~~~~~~   58 (152)
                      ..++|+|+.|.||+++ .+   +.+.+.||+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~~---~~i~iID~e~a  195 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSD---GRIGIIDFEDA  195 (239)
T ss_dssp             EEEE-SS-SGGGEEEESST---TEEEE--GTT-
T ss_pred             cEEEEeccccccceeeecc---ceeEEEecccc
Confidence            4789999999999999 33   22257777643

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=88.26  E-value=1.2  Score=31.81  Aligned_cols=26  Identities=31%  Similarity=0.355  Sum_probs=19.8

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      .+++|+|+.+.|++++.+    .+.+.||+
T Consensus       187 ~~liHgD~~~~Nil~~~~----~i~lIDfd  212 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKDN----EVYVIDFD  212 (313)
T ss_pred             CceEcCCCCcccEEEeCC----cEEEEECc
Confidence            478999999999999753    23466665

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=87.75  E-value=0.32  Score=35.47  Aligned_cols=26  Identities=27%  Similarity=0.431  Sum_probs=20.1

Q ss_pred             CccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           29 LVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        29 i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      +||+|+.|.||+++....  .+.+.||+
T Consensus       199 iIH~D~~~~NVl~d~~~~--~~g~iDFd  224 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTD--VSGFIDFD  224 (331)
T ss_pred             eeecCCCccceeEcCCCC--eeeEEEcc
Confidence            999999999999997743  34455655

>PLN02236 choline kinase

Probab=87.11  E-value=0.75  Score=33.71  Aligned_cols=46  Identities=20%  Similarity=0.239  Sum_probs=29.9

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEM   79 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~   79 (152)
                      ..++|+|+++.||+++...  +.+.+.|++...-.     .-.|-+|..+.+.
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~--~~~~lID~Eya~~~-----~~~~Dia~~~~e~  245 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEET--RAITIIDYEYASYN-----PVAYDIANHFCEM  245 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCC--CcEEEEeehhcccc-----chHHHHHHHHHHH
Confidence            3689999999999997531  45677787644321     1235566655554

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=86.42  E-value=0.2  Score=34.44  Aligned_cols=27  Identities=15%  Similarity=-0.028  Sum_probs=21.2

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      .++|+|+.|.|++++.+   + +.+.|++..
T Consensus       154 ~~~HgD~~~~Nii~~~~---~-~~iIDwe~a  180 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGK---G-TYWIDLGDF  180 (226)
T ss_pred             ceEecCCCCCcEEEcCC---C-cEEEechhc
Confidence            56899999999999876   3 557777643

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=86.19  E-value=0.46  Score=34.08  Aligned_cols=27  Identities=19%  Similarity=0.112  Sum_probs=20.6

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      +++|+|+.+.|++++.+   +.+.+.||..
T Consensus       197 ~lcHgD~~~~Nvl~~~~---~~~~iIDfd~  223 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDET---RGGYFINFEK  223 (309)
T ss_pred             eeeCCCCcHHhEEEcCC---CCEEEEEhhh
Confidence            79999999999999866   3344556553

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=86.13  E-value=0.4  Score=35.91  Aligned_cols=45  Identities=13%  Similarity=0.305  Sum_probs=29.3

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHh-hcCCCCcchhHHHHHHHHHHHHh
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-HGLLLIYHVDTWALGRVFVEMMT   81 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-~~~~~~~~~DvwslG~~l~~~~~   81 (152)
                      ..++|||+.+.||++..+    .+.+.|+... .|.+      -+-+|.++..++.
T Consensus       223 ~~l~HgDl~~gni~~~~~----~~~viD~E~a~~G~~------~~Dlg~~lanl~~  268 (401)
T PRK09550        223 EALLHGDLHTGSIFVTEE----ETKVIDPEFAFYGPI------GFDIGTFIANLLL  268 (401)
T ss_pred             CceeeccCCcccEEeeCC----CcEEEeccccccCCh------HHHHHHHHHHHHH
Confidence            468999999999999765    3567777622 2321      3445666655543

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=86.09  E-value=0.37  Score=34.30  Aligned_cols=48  Identities=21%  Similarity=0.253  Sum_probs=29.8

Q ss_pred             CCccCCCCCCCeeeecC-CCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAG-KDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMM   80 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~-~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~~   80 (152)
                      .++|+|+.+.||+++.+ ...+.+.+.||+...-.  ..   .|-+|..+.++.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~--~p---~~DlA~~~~e~~  228 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYN--YR---GFDIANHFCEWM  228 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCC--Cc---HHHHHHHHHHHH
Confidence            67999999999999752 00134567887644321  22   345566666654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2464 consensus Serine/threonine kinase (haspin family) [Cell cycle control, cell division, chromosome partitioning]

Probab=85.89  E-value=2.1  Score=29.83  Aligned_cols=40  Identities=18%  Similarity=0.155  Sum_probs=35.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCeeeecCC
Q 039869            6 PEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLLVAGK   45 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh-~~~i~h~dlk~~Nil~~~~~   45 (152)
                      +..++..++.|+...+.-.. ..++.|+|+.+.||+++.++
T Consensus       135 ~~~~~~si~~q~~~~l~i~~~~~~~~hrdl~~gnili~k~~  175 (246)
T KOG2464|consen  135 SKNQALSIFWQLVLSLAIAEKSLGFEHRDLHLGNILIKKTG  175 (246)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhhhcccccccCcCcEEEeccc
Confidence            46789999999999998888 45999999999999998763

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=85.50  E-value=0.15  Score=35.16  Aligned_cols=29  Identities=14%  Similarity=0.021  Sum_probs=21.9

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      ..++|+|+.|.|++++..   +.+.+.|++..
T Consensus       163 ~~l~HgD~~~~Nil~~~~---~~~~iIDwe~a  191 (244)
T cd05150         163 LVVTHGDACLPNIIVDPG---KFSGFIDLGRL  191 (244)
T ss_pred             eEEECCCCCCccEEEeCC---cEEEEEEcccc
Confidence            358999999999999875   44556676533

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=84.44  E-value=0.24  Score=35.07  Aligned_cols=28  Identities=18%  Similarity=0.272  Sum_probs=20.4

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      .++|+|+++.|++++.++  +...+.|++.
T Consensus       186 ~lvHGD~~~~Nilv~~~~--~~~gviDWe~  213 (276)
T cd05152         186 VLVHGDLHPGHILIDEDA--RVTGLIDWTE  213 (276)
T ss_pred             eeEeCCCCCCcEEEeCCC--CEEEEECcHh
Confidence            579999999999998631  3344666663

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK06149 hypothetical protein; Provisional

Probab=83.47  E-value=0.61  Score=39.03  Aligned_cols=31  Identities=23%  Similarity=0.177  Sum_probs=21.3

Q ss_pred             hCCCccCCCCCCCeeeecCC--CchhHHHHHHH
Q 039869           26 SHGLVHCDIQGDNTLLVAGK--DAHEAEISAFL   56 (152)
Q Consensus        26 ~~~i~h~dlk~~Nil~~~~~--~~~~~~l~~~~   56 (152)
                      ..++||+|+.+.||+++.+.  ......+.||+
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFg  239 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFG  239 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcc
Confidence            45899999999999998542  22223455555

>TIGR02721 ycfN_thiK thiamine kinase

Probab=83.24  E-value=0.32  Score=33.81  Aligned_cols=26  Identities=12%  Similarity=0.206  Sum_probs=20.7

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      .++|+|+.|.|++++.++    +.+.|++.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~----~~lIDwE~  172 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG----LKLIDWEY  172 (256)
T ss_pred             eeecCCCCcCcEEEeCCC----CEEEeccc
Confidence            589999999999998762    45777663

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=82.58  E-value=0.41  Score=32.24  Aligned_cols=47  Identities=17%  Similarity=0.191  Sum_probs=27.1

Q ss_pred             CCCccCCCCCCCeee-ecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHh
Q 039869           27 HGLVHCDIQGDNTLL-VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMT   81 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~-~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~~~   81 (152)
                      ..++|+|+.+.||++ +.+   +.+.+.||....-     ..-.|-+|.++.+...
T Consensus       143 ~v~cHnDl~~~Nil~~~~~---~~~~lIDfEya~~-----n~~~fDia~~f~e~~~  190 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKD---GEVKLIDFEYAGY-----NDRAFDIANFFCEWNF  190 (211)
T ss_dssp             EEEE-S--SGGGEEETSSS---SCEEE--GTT-EE-----EEHHHHHHHHHHHTTE
T ss_pred             ceEeeccCccccEEeccCC---CeEEEecHHHHhh-----ccchhhHHHHHHHHcC
Confidence            367999999999999 445   6778888874422     2235667776665543

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=82.40  E-value=3.3  Score=27.98  Aligned_cols=26  Identities=15%  Similarity=0.120  Sum_probs=21.4

Q ss_pred             HHHHHHhCCCccCCCCCCCeeeecCC
Q 039869           20 GLDHIHSHGLVHCDIQGDNTLLVAGK   45 (152)
Q Consensus        20 ~l~~lh~~~i~h~dlk~~Nil~~~~~   45 (152)
                      -..+|-+.+|+.+|++|.||++..+.
T Consensus       130 f~~~l~~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen  130 FKRYLLDHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             HHHHHHHcCCeecCCCcccEEEEecC
Confidence            34577889999999999999997543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=80.44  E-value=0.82  Score=33.86  Aligned_cols=26  Identities=15%  Similarity=0.256  Sum_probs=20.1

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      ..++|||+.+.||++...    ...+.|+.
T Consensus       192 ~~llHGDl~~gNi~~~~~----~~~~iD~e  217 (370)
T TIGR01767       192 ETLLHGDLHSGSIFVSEH----ETKVIDPE  217 (370)
T ss_pred             ceeeeccCCcccEEEcCC----CCEEEcCc
Confidence            478999999999999755    24466665

This enzyme is involved in the methionine salvage pathway in certain bacteria.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-09
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		6e-09
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-08
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-08
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-08
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-08
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-07
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-07
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-07
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-07
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-07
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-07
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-07
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		5e-07
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-07
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		5e-07
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-07
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		6e-07
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-07
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		6e-07
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-07
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-07
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-07
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-07
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		6e-07
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		6e-07
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		6e-07
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-07
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-07
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-07
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-07
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-07
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		6e-07
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		6e-07
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-07
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		6e-07
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		6e-07
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		6e-07
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-07
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		6e-07
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-07
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		7e-07
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-06
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		1e-06
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-06
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-06
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-06
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		8e-06
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-05
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-05
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		5e-05
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-05
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		8e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		9e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-04
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-04
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-04
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-04
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-04
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-04
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-04
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-04
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		5e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		5e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		6e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		6e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		6e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		7e-04
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		7e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-04
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		8e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		8e-04
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		8e-04

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----------------VAGKDAHE 49
           E  IG YTK IL GL ++H + +VH DI+GDN L+                 +AG +   
Sbjct: 121 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180
Query: 50  AEISAFLQRHGLLLI--------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
              +  LQ     +I           D W+LG   +EM T +   +   G   A+   + 
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGEPQAA---MF 236
Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
           ++  F    PE P ++S + + F+ KCF      R  A  +L   F  V
Sbjct: 237 KVGMFKVH-PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV 284

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----------------VAGKDAHE 49
           E  IG YTK IL GL ++H + +VH DI+GDN L+                 +AG +   
Sbjct: 107 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 166
Query: 50  AEISAFLQRHGLLLI--------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
              +  LQ     +I           D W+LG   +EM T +   +   G   A+   + 
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGEPQAA---MF 222
Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           ++  F    PE P ++S + + F+ KCF      R  A  +L   F
Sbjct: 223 KVGMFKVH-PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 267

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
           + L E +I    K  L  L+++H + ++H D++  N L     D   A+  +SA     +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 57  QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           QR    +                      Y  D W+LG   +EM  AEI         L 
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEP---PHHELN 244
Query: 96  SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
               LL++    SE P    PS  S + +DFL KC  +    RWT   +L HPF +VD
Sbjct: 245 PMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
           + L E +I    K  L  L+++H + ++H D++  N L     D   A+  +SA     +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 57  QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           QR    +                      Y  D W+LG   +EM  AEI         L 
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEP---PHHELN 244
Query: 96  SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
               LL++    SE P    PS  S + +DFL KC  +    RWT   +L HPF +VD
Sbjct: 245 PMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
           + L E +I    K  L  L+++H + ++H D++  N L     D   A+  +SA     +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 57  QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           QR    +                      Y  D W+LG   +EM  AEI         L 
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEP---PHHELN 244
Query: 96  SRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
               LL++    SE P    PS  S + +DFL KC  +    RWT   +L HPF +VD
Sbjct: 245 PMRVLLKIA--KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAF--- 55
           G+P   I      +LRGLD +HSH +VH D++  N L+ +       D   A I +F   
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 56  LQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGS-----FGR----- 92
           L    + L Y              VD W++G +F EM   +    GS      G+     
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 93  GLA-----SRDDLLELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
           GL       RD  L   AF S+    + +F ++I E G+D L KC       R +A   L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 144 AHPF 147
           +HP+
Sbjct: 296 SHPY 299

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAF--- 55
           G+P   I      +LRGLD +HSH +VH D++  N L+ +       D   A I +F   
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 56  LQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGS-----FGR----- 92
           L    + L Y              VD W++G +F EM   +    GS      G+     
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 93  GLA-----SRDDLLELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
           GL       RD  L   AF S+    + +F ++I E G+D L KC       R +A   L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 144 AHPF 147
           +HP+
Sbjct: 296 SHPY 299

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAF--- 55
           G+P   I      +LRGLD +HSH +VH D++  N L+ +       D   A I +F   
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 56  LQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGS-----FGR----- 92
           L    + L Y              VD W++G +F EM   +    GS      G+     
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 93  GLA-----SRDDLLELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
           GL       RD  L   AF S+    + +F ++I E G+D L KC       R +A   L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 144 AHPF 147
           +HP+
Sbjct: 296 SHPY 299

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++ +N LL+  + A                
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 281 AKAALAHPF 289

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++ +N LL+  + A                
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 280 AKAALAHPF 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++ +N LL+  + A                
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 279 AKAALAHPF 287

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++ +N LL+  + A                
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 279 AKAALAHPF 287

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++ +N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 98  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 277 AKAALAHPF 285

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 106 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 164
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 165 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 225 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 284
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 285 AKAALAHPF 293

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 159 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 279 AKAALAHPF 287

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 98  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 277 AKAALAHPF 285

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 106 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 164
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 225 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 284
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 285 AKAALAHPF 293

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 281 AKAALAHPF 289

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 98  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 277 AKAALAHPF 285

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 161
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 162 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 222 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 281
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 282 AKAALAHPF 290

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 98  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 277 AKAALAHPF 285

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 98  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 277 AKAALAHPF 285

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 281 AKAALAHPF 289

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 280 AKAALAHPF 288

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 280 AKAALAHPF 288

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 98  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 156
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 277 AKAALAHPF 285

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 279 AKAALAHPF 287

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 159
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 220 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 279
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 280 AKAALAHPF 288

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 158
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 219 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 278
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 279 AKAALAHPF 287

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 281 AKAALAHPF 289

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 281 AKAALAHPF 289

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 99  GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 157
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 277
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 278 AKAALAHPF 286

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 160
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 221 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 280
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 281 AKAALAHPF 289

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA---------------- 47
           G+P   I  Y   +L+GL   HSH ++H D++  N LL+  + A                
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGAIKLADFGLARAFGVPV 161
Query: 48  --HEAEISAFLQRHGLLLI---YH---VDTWALGRVFVEMMT--------AEISAWGSFG 91
             +  E+     R   +L+   Y+   VD W+LG +F EM+T        +EI       
Sbjct: 162 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 92  RGLASRDDLL--ELIAFSSEVPEFPS-----------NISEDGRDFLSKCFIRVHQLRWT 138
           R L + D+++   + +     P FP             + EDGR  LS+        R +
Sbjct: 222 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 281
Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 282 AKAALAHPF 290

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAH----- 48
           + E E   Y + + +GL H+H +  VH D++ +N +              G  AH     
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
Query: 49  -------EAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFG-----RGLAS 96
                   AE +A     G  + Y+ D W++G V   ++ + +S +G        R + S
Sbjct: 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG-VLSYILLSGLSPFGGENDDETLRNVKS 370
Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            D  ++  AFS         ISEDG+DF+ K  +     R T    L HP+
Sbjct: 371 CDWNMDDSAFSG--------ISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 31/167 (18%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE------AEISAFLQR 58
           L E +I    + +L+ L ++H+ G++H DI+ D+ LL              A+IS  + +
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197
Query: 59  HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              L+              +Y   VD W+LG + +EM+  E   +         R     
Sbjct: 198 RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR----- 252
Query: 103 LIAFSSEVPEFPSN--ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                S  P+  ++  +S   RDFL +  +R  Q R TA+ +L HPF
Sbjct: 253 --LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAH----- 48
           + E E   Y + + +GL H+H +  VH D++ +N +              G  AH     
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205
Query: 49  -------EAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFG-----RGLAS 96
                   AE +A     G  + Y+ D W++G V   ++ + +S +G        R + S
Sbjct: 206 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG-VLSYILLSGLSPFGGENDDETLRNVKS 264
Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            D  ++  AFS         ISEDG+DF+ K  +     R T    L HP+
Sbjct: 265 CDWNMDDSAFSG--------ISEDGKDFIRKLLLADPNTRMTIHQALEHPW 307

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-----SAFLQ 57
           K   EH+  R  K +  G+ ++H H +VH D++ +N LL + +   + +I     S   Q
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 58  RHGLL-----LIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           ++  +       Y++             D W+ G +   +++     +G     +  R  
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR-- 233
Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +E   ++ ++P++ + IS+D +D + K       LR TA   L HP+
Sbjct: 234 -VETGKYAFDLPQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-----SAFLQ 57
           K   EH+  R  K +  G+ ++H H +VH D++ +N LL + +   + +I     S   Q
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 58  RHGLL-----LIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           ++  +       Y++             D W+ G +   +++     +G     +  R  
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR-- 233
Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +E   ++ ++P++ + IS+D +D + K       LR TA   L HP+
Sbjct: 234 -VETGKYAFDLPQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
           K   EH+  R  K +  G+ ++H H +VH D++ +N LL + +   + +I  F      Q
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 58  RHGLL-----LIYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           ++  +       Y++             D W+ G +   +++     +G     +  R  
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR-- 233
Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +E   ++ ++P++ + IS+D +D + K       LR TA   L HP+
Sbjct: 234 -VETGKYAFDLPQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 43/175 (24%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH------EAEISAFLQR 58
           L E  I    ++ILRGL H+H H ++H DI+G N LL    +         A++   + R
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 59  HGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
               +                      +  D W+LG   +EM             G    
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM-----------AEGAPPL 234
Query: 98  DDLLELIAF----SSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            D+  + A      +  P   S   S+  + F+  C ++ H  R   + ++ HPF
Sbjct: 235 CDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
           E +I    ++ L+ L+ +HS+ ++H DI+ DN LL  G D           A+I+    +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 172
Query: 59  HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              ++               Y   VD W+LG + +EM+  E            +    L 
Sbjct: 173 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 226
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           LIA ++  PE   P  +S   RDFL++C     + R +AK +L H F
Sbjct: 227 LIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF 272

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
           E +I    ++ L+ L+ +HS+ ++H DI+ DN LL  G D           A+I+    +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 172
Query: 59  HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              ++               Y   VD W+LG + +EM+  E            +    L 
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 226
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           LIA ++  PE   P  +S   RDFL++C     + R +AK +L H F
Sbjct: 227 LIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
           E +I    ++ L+ L+ +HS+ ++H DI+ DN LL  G D           A+I+    +
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 172
Query: 59  HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              ++               Y   VD W+LG + +EM+  E            +    L 
Sbjct: 173 RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 226
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           LIA ++  PE   P  +S   RDFL++C     + R +AK +L H F
Sbjct: 227 LIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
           E +I    ++ L+ L+ +HS+ ++H DI+ DN LL  G D           A+I+    +
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 173
Query: 59  HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              ++               Y   VD W+LG + +EM+  E            +    L 
Sbjct: 174 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 227
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           LIA ++  PE   P  +S   RDFL++C     + R +AK ++ H F
Sbjct: 228 LIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQF 273

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 5   LPEHEIGRYTKDILRGLDHI-HSHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
           +PE  +G+ +  +++GL ++   H ++H D++  N L+            V+G+   E  
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA 163
Query: 52  ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
                 R         G       D W++G   VEM      A G + R   +  +LL+ 
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM------AVGRYPRPPMAIFELLDY 217
Query: 104 IAFSSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           I  +   P+ PS + S + +DF++KC I+    R   K ++ H F
Sbjct: 218 IV-NEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 261

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 39/168 (23%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQRH 59
           E +I    K+IL+GLD++HS   +H DI+  N LL    D   A+           ++R+
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 178
Query: 60  GLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL---- 100
             +         +I         D W+LG   +E+            +G     D+    
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL-----------AKGEPPNSDMHPMR 227
Query: 101 -LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            L LI   +  P    + ++  ++F+  C  +    R TAK +L H F
Sbjct: 228 VLFLIP-KNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 39/173 (22%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISA-------F 55
           K L E EI    +  L+GL+++H    +H DI+  N LL     A  A+           
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXM 179
Query: 56  LQRHGLL---------LIYHV------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
            +R+ ++         +I  +      D W+LG   +EM             G     D+
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM-----------AEGKPPYADI 228
Query: 101 LELIAF----SSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             + A     ++  P F  P   S++  DF+ +C ++  + R TA  +L HPF
Sbjct: 229 HPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 52/191 (27%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLL--- 63
           E E  R  +D+   LD +H+ G+ H D++ +N L  + +     +I  F    G+ L   
Sbjct: 110 EREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS 169
Query: 64  --------------------------------IY--HVDTWALGRVFVEMMTAEISAWGS 89
                                            Y    D W+LG V   M++      G 
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
Query: 90  FG------RGLASR---DDLLELIAFSSEVPEFP----SNISEDGRDFLSKCFIRVHQLR 136
            G      RG   R   + L E I       EFP    ++IS + +D +SK  +R  + R
Sbjct: 230 CGADCGWDRGEVCRVCQNKLFESIQEGKY--EFPDKDWAHISSEAKDLISKLLVRDAKQR 287
Query: 137 WTAKHVLAHPF 147
            +A  VL HP+
Sbjct: 288 LSAAQVLQHPW 298

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 39/170 (22%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
           L E  I    ++IL+GLD++HS   +H DI+  N LL    D   A+           ++
Sbjct: 113 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 172
Query: 58  RHGLL---------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
           R+  +                 +  D W+LG   +E+            +G     DL  
Sbjct: 173 RNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL-----------AKGEPPNSDLHP 221
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              L LI  +S  P      S+  ++F+  C  +  + R TAK +L H F
Sbjct: 222 MRVLFLIPKNSP-PTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE--------AEISAFLQR 58
           E +I    ++ L+ L+ +HS+ ++H +I+ DN LL  G D           A+I+    +
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL--GMDGSVKLTDFGFCAQITPEQSK 173
Query: 59  HGLLL--------------IY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              ++               Y   VD W+LG + +EM+  E            +    L 
Sbjct: 174 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALY 227
Query: 103 LIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           LIA ++  PE   P  +S   RDFL++C     + R +AK ++ H F
Sbjct: 228 LIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQF 273

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHE-----AEISAFLQRHG 60
           E +I      +LR L ++H+ G++H DI+ D+ LL + G+         A++S  + +  
Sbjct: 140 EEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 199
Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 200 XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF--------NEPPLQAMR 251
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    +   +S   R FL    +R    R TA+ +L HPF
Sbjct: 252 RIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPF 297

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 5   LPEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLL------------VAGKDAHEAE 51
           +PE  +G+ +  +++GL ++   H ++H D++  N L+            V+G+      
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 179
Query: 52  ISAFLQR--------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
            S    R         G       D W++G   VEM        GS G G  +  +LL+ 
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY-PIGS-GSGSMAIFELLDY 237
Query: 104 IAFSSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           I  +   P+ PS + S + +DF++KC I+    R   K ++ H F
Sbjct: 238 IV-NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 281

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
           L E +I    ++IL+GLD++HS   +H DI+  N LL    +   A+           ++
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 58  RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
           R+  +         +I         D W+LG   +E+            RG     +L  
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 229
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              L LI   +  P    N S+  ++F+  C  +    R TAK +L H F
Sbjct: 230 MKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 278

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
           L E +I    ++IL+GLD++HS   +H DI+  N LL    +   A+           ++
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 58  RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
           R+  +         +I         D W+LG   +E+            RG     +L  
Sbjct: 161 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 209
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              L LI   +  P    N S+  ++F+  C  +    R TAK +L H F
Sbjct: 210 MKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 67/174 (38%), Gaps = 32/174 (18%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
           +GL E +I    + +L  L+ +HS  ++H D++  N L+    D   A+  +SA     L
Sbjct: 104 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 163
Query: 57  QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           Q+    +                      Y  D W+LG   +EM   E          L 
Sbjct: 164 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-----HHELN 218
Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
               LL++          PS  S + RDFL     +  + R +A  +L HPF S
Sbjct: 219 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 272

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 72/193 (37%), Gaps = 50/193 (25%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNT-----------------LLVAGK 45
           +G+PEH +   T   L+ ++  H H  +H D++ +N                  LL    
Sbjct: 97  RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156
Query: 46  DAHEAEISAFLQRHGLLLI------YHVDTWALGRVFVEMMTAEISAW---GSFGRGLAS 96
           D ++ E++    R   LL+        VD WA+G VF E+++  +  W       +    
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLI 215
Query: 97  RDDLLELIAFSSEV--------------PE--------FPSNISEDGRDFLSKCFIRVHQ 134
           R  L +LI    +V              PE        FP NIS      L  C      
Sbjct: 216 RKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFP-NISYPALGLLKGCLHMDPT 274
Query: 135 LRWTAKHVLAHPF 147
            R T + +L HP+
Sbjct: 275 ERLTCEQLLHHPY 287

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 37/169 (21%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
           L E +I    ++IL+GLD++HS   +H DI+  N LL    +   A+           ++
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 58  RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
           R+  +         +I         D W+LG   +E+            RG     +L  
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 224
Query: 103 LIAF----SSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +        +  P    N S+  ++F+  C  +    R TAK +L H F
Sbjct: 225 MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-------LQ 57
           L E +I    ++IL+GLD++HS   +H DI+  N LL    +   A+           ++
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 58  RHGLL---------LIYH------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-- 100
           R+  +         +I         D W+LG   +E+            RG     +L  
Sbjct: 161 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----------ARGEPPHSELHP 209
Query: 101 ---LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              L LI   +  P    N S+  ++F+  C  +    R TAK +L H F
Sbjct: 210 MKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 67/174 (38%), Gaps = 32/174 (18%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISA----FL 56
           +GL E +I    + +L  L+ +HS  ++H D++  N L+    D   A+  +SA     L
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171
Query: 57  QRHGLLL---------------------IYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           Q+    +                      Y  D W+LG   +EM   E          L 
Sbjct: 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-----HHELN 226
Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
               LL++          PS  S + RDFL     +  + R +A  +L HPF S
Sbjct: 227 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 41/176 (23%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF------LQ 57
            L E +   + K I  G+ H+H   ++H D++ +N L V  +DA + +I  F        
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCV-NRDAKQIKIIDFGLARRYKP 241
Query: 58  RHGL------------------LLIYHVDTWALGRVFVEMMTAEISAW------GSFGRG 93
           R  L                   + +  D W++G V   M+ + +S +       +    
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVG-VIAYMLLSGLSPFLGDNDAETLNNI 300
Query: 94  LASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS 149
           LA R DL        E  EF  +ISE+ ++F+SK  I+    R +A   L HP+ S
Sbjct: 301 LACRWDL--------EDEEF-QDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
           E +I      +L+ L  +H+ G++H DI+ D+ LL     V   D    A++S  + R  
Sbjct: 169 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228
Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 229 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 280
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    N   +S   + FL +  +R    R TA  +L HPF
Sbjct: 281 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 326

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
           E +I      +L+ L  +H+ G++H DI+ D+ LL     V   D    A++S  + R  
Sbjct: 246 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305
Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 306 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 357
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    N   +S   + FL +  +R    R TA  +L HPF
Sbjct: 358 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 403

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
           E +I      +L+ L  +H+ G++H DI+ D+ LL     V   D    A++S  + R  
Sbjct: 126 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 185
Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 186 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 237
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    N   +S   + FL +  +R    R TA  +L HPF
Sbjct: 238 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 283

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
           E +I      +L+ L  +H+ G++H DI+ D+ LL     V   D    A++S  + R  
Sbjct: 124 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 183
Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 184 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 235
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    N   +S   + FL +  +R    R TA  +L HPF
Sbjct: 236 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 281

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AH 48
             + L E E   + K IL G++++H+  + H D++ +N +L+                AH
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 49  EAEISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           E E    F    G        ++ Y       D W++G     ++T  + +  S   G  
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDT 222
Query: 96  SRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            ++ L  + A S +   EF S  SE  +DF+ K  ++  + R T +  L HP
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
           + L E E   + K IL G++++H+  + H D++ +N +L+                AHE 
Sbjct: 110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 51  EISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           E    F    G        ++ Y       D W++G     ++T  + +  S   G   +
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 224
Query: 98  DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           + L  + A S +   EF S  SE  +DF+ K  ++  + R T +  L HP
Sbjct: 225 ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
           E +I      +L+ L  +H+ G++H DI+ D+ LL     V   D    A++S  + R  
Sbjct: 115 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174
Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 175 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 226
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    N   +S   + FL +  +R    R TA  +L HPF
Sbjct: 227 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKD-AHEAEISAFLQRHG 60
           E +I      +L+ L  +H+ G++H DI+ D+ LL     V   D    A++S  + R  
Sbjct: 119 EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 178
Query: 61  LL--------------LIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
            L              L Y   VD W+LG + +EM+  E   +        +   L  + 
Sbjct: 179 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF--------NEPPLKAMK 230
Query: 105 AFSSEVPEFPSN---ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +P    N   +S   + FL +  +R    R TA  +L HPF
Sbjct: 231 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 276

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 41/178 (23%)
Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVA---------------- 43
             + +PE  +G+    I++ L+H+HS   ++H D++  N L+ A                
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161
Query: 44  ---GKDAHEA--------EISAFLQRHGLLLIYHV--DTWALGRVFVEMMTAEISAWGSF 90
               KD             I+  L + G    Y V  D W+LG   +E+       + S+
Sbjct: 162 DDVAKDIDAGCKPYMAPERINPELNQKG----YSVKSDIWSLGITMIELAILRF-PYDSW 216
Query: 91  GRGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           G        ++E        P+ P++  S +  DF S+C  +  + R T   ++ HPF
Sbjct: 217 GTPFQQLKQVVE-----EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
           + L E E   + K IL G++++H+  + H D++ +N +L+                AHE 
Sbjct: 110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 51  EISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           E    F    G        ++ Y       D W++G     ++T  + +  S   G   +
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 224
Query: 98  DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           + L  + A S +   EF S  SE  +DF+ K  ++  + R T +  L HP
Sbjct: 225 ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 21/100 (21%)
Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--------- 51
              GLP   I    +  LRGLD +H++ +VH D++ +N L+ +G     A+         
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY 172
Query: 52  --------ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
                   ++ + +   +LL       VD W++G +F EM
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 41/177 (23%)
Query: 2   AKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLV------------------ 42
            + +PE  +G+    I++ L+H+HS   ++H D++  N L+                   
Sbjct: 147 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206
Query: 43  -------AGKDAHEA--EISAFLQRHGLLLIYHV--DTWALGRVFVEMMTAEISAWGSFG 91
                  AG   + A   I+  L + G    Y V  D W+LG   +E+       + S+G
Sbjct: 207 SVAKTIDAGCKPYMAPERINPELNQKG----YSVKSDIWSLGITMIELAILRF-PYDSWG 261
Query: 92  RGLASRDDLLELIAFSSEVPEFPSN-ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                   ++E        P+ P++  S +  DF S+C  +  + R T   ++ HPF
Sbjct: 262 TPFQQLKQVVE-----EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE------------ 51
           GLP   I    +  LRGLD +H++ +VH D++ +N L+ +G     A+            
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 52  -----ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
                ++ + +   +LL       VD W++G +F EM
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE------------ 51
           GLP   I    +  LRGLD +H++ +VH D++ +N L+ +G     A+            
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 52  -----ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
                ++ + +   +LL       VD W++G +F EM
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE------------ 51
           GLP   I    +  LRGLD +H++ +VH D++ +N L+ +G     A+            
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 52  -----ISAFLQRHGLLL----IYHVDTWALGRVFVEM 79
                ++ + +   +LL       VD W++G +F EM
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
           +A GLPE E     +D++ G++H+  +G+VH +I+  N + V G+D  
Sbjct: 105 NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH 48
           +A GLPE E     +D++ G++H+  +G+VH +I+  N + V G+D  
Sbjct: 105 NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 43/174 (24%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----LVAGKDAHEAEISA--- 54
           K L E EI   T   L+GL ++HSH ++H D++  N L     LV   D   A I A   
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208
Query: 55  ------FLQRHGLLLIY-------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
                 +     ++L          VD W+LG   +E+                 +  L 
Sbjct: 209 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--------------RKPPLF 254
Query: 102 ELIAFSS-------EVPEFPS-NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            + A S+       E P   S + SE  R+F+  C  ++ Q R T++ +L H F
Sbjct: 255 NMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 39/179 (21%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
           K +   E   Y K++L  +  IH HG+VH D++  N L+V G          +  + + +
Sbjct: 106 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 165
Query: 54  AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
           + ++   +  + ++                         D W+LG +   M   +     
Sbjct: 166 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 221
Query: 89  SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            F + +     L  +I  + E+ EFP    +D +D L  C  R  + R +   +LAHP+
Sbjct: 222 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 279

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 71/179 (39%), Gaps = 39/179 (21%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
           K +   E   Y K++L  +  IH HG+VH D++  N L+V G          +  + + +
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 209
Query: 54  AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
           + ++   +  + ++                         D W+LG +   M   +     
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 265
Query: 89  SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            F + +     L  +I  + E+ EFP    +D +D L  C  R  + R +   +LAHP+
Sbjct: 266 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 39/182 (21%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
           K +   E   Y K++L  +  IH HG+VH D++  N L+V G          +  + + +
Sbjct: 102 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 161
Query: 54  AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
           + ++   +  + ++                         D W+LG +   M   +     
Sbjct: 162 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 217
Query: 89  SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP 148
            F + +     L  +I  + E+ EFP    +D +D L  C  R  + R +   +LAHP+ 
Sbjct: 218 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
Query: 149 SV 150
            +
Sbjct: 277 QI 278

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 39/182 (21%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEIS 53
           K +   E   Y K++L  +  IH HG+VH D++  N L+V G          +  + + +
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 181
Query: 54  AFLQRHGLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWG 88
           + ++   +  + ++                         D W+LG +   M   +     
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT---- 237
Query: 89  SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFP 148
            F + +     L  +I  + E+ EFP    +D +D L  C  R  + R +   +LAHP+ 
Sbjct: 238 PFQQIINQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
Query: 149 SV 150
            +
Sbjct: 297 QI 298

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 9   EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEISAFLQRH 59
           E   Y K++L  +  IH HG+VH D++  N L+V G          +  + + ++ ++  
Sbjct: 109 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 168
Query: 60  GLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWGSFGRGL 94
            +  + ++                         D W+LG +   M   +      F + +
Sbjct: 169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT----PFQQII 224
Query: 95  ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
                L  +I  + E+ EFP    +D +D L  C  R  + R +   +LAHP+  +
Sbjct: 225 NQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 31/172 (18%)
Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AH 48
             + L E E   + K IL G++++H+  + H D++ +N +L+                AH
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 49  EAEISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           E E    F    G        ++ Y       D W++G     ++T  + +  S   G  
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDT 222
Query: 96  SRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            ++ L  + + S +   EF S+ SE  +DF+ K  ++  + R T +  L HP
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 43/174 (24%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTL-----LVAGKDAHEAEISA--- 54
           K L E EI   T   L+GL ++HSH ++H D++  N L     LV   D   A I A   
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169
Query: 55  ------FLQRHGLLLIY-------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
                 +     ++L          VD W+LG   +E+                 +  L 
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE--------------RKPPLF 215
Query: 102 ELIAFSS-------EVPEFPS-NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            + A S+       E P   S + SE  R+F+  C  ++ Q R T++ +L H F
Sbjct: 216 NMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 31/172 (18%)
Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AH 48
             + L E E   + K IL G++++H+  + H D++ +N +L+                AH
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 49  EAEISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
           E E    F    G        ++ Y       D W++G     ++T  + +  S   G  
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDT 222
Query: 96  SRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            ++ L  + + S +   EF S+ SE  +DF+ K  ++  + R T +  L HP
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 39/173 (22%)
Query: 9   EIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG---------KDAHEAEISAFLQRH 59
           E   Y K++L  +  IH HG+VH D++  N L+V G          +  + + ++ ++  
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 215
Query: 60  GLLLIYHV-------------------------DTWALGRVFVEMMTAEISAWGSFGRGL 94
            +  + ++                         D W+LG +   M   +      F + +
Sbjct: 216 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT----PFQQII 271
Query: 95  ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                L  +I  + E+ EFP    +D +D L  C  R  + R +   +LAHP+
Sbjct: 272 NQISKLHAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD------------AHEA 50
           + L E E   + K IL G++++H+  + H D++ +N +L+                AHE 
Sbjct: 110 ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 51  EISA-FLQRHGL-------LLIY-----HVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           E    F    G        ++ Y       D W++G     ++T  + +  S   G   +
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-----VITYILLSGASPFLGDTKQ 224
Query: 98  DDLLELIAFSSEV-PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           + L  + + S +   EF S+ SE  +DF+ K  ++  + R T +  L HP
Sbjct: 225 ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-26
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-23
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-22
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-22
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-21
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-21
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-21
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-21
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-16
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-16
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-15
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-15
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	8e-15
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-14
3an0_A	340	Dual specificity mitogen-activated protein kinase;	8e-14
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-13
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-13
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-13
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-13
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-13
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-12
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-12
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-11
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	9e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-09
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-08
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-08
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-08
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-08
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-07
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	8e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	9e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-06
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-06
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-06
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-06
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-06
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	5e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	7e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-05
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-05
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	6e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-04

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 98.5 bits (246), Expect = 6e-26
 Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 38/172 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-------------VAGKDAHEAE 51
             E  IG YTK IL GL ++H + +VH DI+GDN L+              + + A    
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178

Query: 52  ----------------ISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
                           I    + +G       D W+LG   +EM T +   +   G   A
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKA----ADIWSLGCTIIEMATGKPP-FYELGEPQA 233

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +  +      PE P ++S + + F+ KCF      R  A  +L   F
Sbjct: 234 ----AMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 91.3 bits (227), Expect = 5e-23
 Identities = 29/182 (15%), Positives = 55/182 (30%), Gaps = 45/182 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-------------VAGKDAHEAE 51
           LPE     Y    L GL+++H+  ++H D++ DN LL              A     +  
Sbjct: 147 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206

Query: 52  ISAFLQRHGLL-LIYH--------------VDTWALGRVFVEMMT-----AEISAWGSFG 91
             + L    +     H              VD W+   + + M+       +        
Sbjct: 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--- 263

Query: 92  RGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV 150
                   L   IA     + E P + +      + +   +    R +A  +      ++
Sbjct: 264 --------LCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315

Query: 151 DE 152
            E
Sbjct: 316 QE 317

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 90.3 bits (224), Expect = 2e-22
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 47/183 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK----D------------ 46
           K +   E   Y K++L  +  IH HG+VH D++  N L+V G     D            
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 209

Query: 47  --------------AHEA-EISAFLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWG 88
                           EA +  +  + +G          D W+LG +   M         
Sbjct: 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------- 262

Query: 89  SFGR----GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
             G+     + ++   L  I   +   EFP    +D +D L  C  R  + R +   +LA
Sbjct: 263 --GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320

Query: 145 HPF 147
           HP+
Sbjct: 321 HPY 323

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 89.0 bits (221), Expect = 4e-22
 Identities = 38/187 (20%), Positives = 61/187 (32%), Gaps = 55/187 (29%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK----------------- 45
           K +   E   Y K++L  +  IH HG+VH D++  N L+V G                  
Sbjct: 103 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 162

Query: 46  ---------------------DAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEI 84
                                 +   E      +         D W+LG +   M     
Sbjct: 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS----PKSDVWSLGCILYYMTY--- 215

Query: 85  SAWGSFGR----GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK 140
                 G+     + ++   L  I   +   EFP    +D +D L  C  R  + R +  
Sbjct: 216 ------GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIP 269

Query: 141 HVLAHPF 147
            +LAHP+
Sbjct: 270 ELLAHPY 276

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 87.4 bits (217), Expect = 1e-21
 Identities = 29/181 (16%), Positives = 46/181 (25%), Gaps = 48/181 (26%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLI 64
             E E+      + RGL +IHS  LVH DI+  N  +      + A             +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171

Query: 65  --------------------------------------YHVDTWALGRVFVEMMTAEISA 86
                                                    D +AL    V         
Sbjct: 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG----- 226

Query: 87  WGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
                  L    D    I     +P  P  +S++  + L        + R +A  ++ H 
Sbjct: 227 ----AEPLPRNGDQWHEIR-QGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281

Query: 147 F 147
            
Sbjct: 282 V 282

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 87.0 bits (216), Expect = 2e-21
 Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 37/169 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEA 50
             LPE ++  Y +D L  L H+HS GLVH D++  N  L            +  +     
Sbjct: 152 ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211

Query: 51  EISAF-----------LQ-RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
                           LQ  +G       D ++LG   +E+              L    
Sbjct: 212 AGEVQEGDPRYMAPELLQGSYG----TAADVFSLGLTILEVAC---------NMELPHGG 258

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +  + +      PEF + +S + R  L        +LR TA+ +LA P 
Sbjct: 259 EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 86.6 bits (215), Expect = 2e-21
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 47/183 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK----D------------ 46
           K +   E   Y K++L  +  IH HG+VH D++  N L+V G     D            
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTT 181

Query: 47  --------------AHEA-EISAFLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWG 88
                           EA +  +  + +G          D W+LG +   M         
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY------- 234

Query: 89  SFGR----GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
             G+     + ++   L  I   +   EFP    +D +D L  C  R  + R +   +LA
Sbjct: 235 --GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292

Query: 145 HPF 147
           HP+
Sbjct: 293 HPY 295

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 85.9 bits (213), Expect = 3e-21
 Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 37/172 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKDAHEAEI-------S 53
           K +    +  + + IL+GL  +H+    ++H D++ DN  +          +       +
Sbjct: 124 KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI----TGPTGSVKIGDLGLA 179

Query: 54  AFLQRHGLLLI-----------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
              +      +                   VD +A G   +EM T+E   +         
Sbjct: 180 TLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEY-PYSECQNAAQ- 237

Query: 97  RDDLLELIAFSSEVPE-FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               +     S   P  F      + ++ +  C  +    R++ K +L H F
Sbjct: 238 ----IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 74.0 bits (182), Expect = 2e-16
 Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 43/181 (23%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-------------- 48
                 E     +    GL H+HS  +VH D++  N +L++  +AH              
Sbjct: 113 FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHN-ILISMPNAHGKIKAMISDFGLCK 171

Query: 49  --EAEISAFLQRHGLL--LIYH----------------VDTWALGRVFVEMMTAEISAWG 88
                  +F +R G+     +                 VD ++ G VF  +++      G
Sbjct: 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE-----G 226

Query: 89  S--FGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           S  FG     R   + L A S +      +     R+ + K      Q R +AKHVL HP
Sbjct: 227 SHPFG-KSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285

Query: 147 F 147
           F
Sbjct: 286 F 286

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 71.6 bits (176), Expect = 7e-16
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 28/166 (16%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
           +PE  + +Y   +   L+H+HS  ++H DI+  N  + A       +  +  F       
Sbjct: 133 IPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192

Query: 63  LI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
                                 +  D W+LG +  EM   + S +      L S   L +
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ-SPFYGDKMNLYS---LCK 248

Query: 103 LIAFSSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            I    + P  PS+  SE+ R  ++ C     + R    +V     
Sbjct: 249 KIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 70.4 bits (173), Expect = 2e-15
 Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 51/181 (28%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--------EAEI 52
           +   + E +I    ++ L+ L+ +HS+ ++H DI+ DN LL  G D           A+I
Sbjct: 109 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQI 166

Query: 53  SAFLQRHGLL----------LI------YHVDTWALGRVFVEMMTAE--------ISAWG 88
           +    +   +          ++        VD W+LG + +EM+  E        + A  
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-- 224

Query: 89  SFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
                       L LIA ++  PE   P  +S   RDFL++C     + R +AK +L H 
Sbjct: 225 ------------LYLIA-TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271

Query: 147 F 147
           F
Sbjct: 272 F 272

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 69.7 bits (171), Expect = 4e-15
 Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 29/165 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
             E +I  +   I   L H+H   ++H DI+  N  L         +  I+  L     L
Sbjct: 122 FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181

Query: 63  LI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
                                    D WALG V  E+ T + +          S  +L+ 
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG------SMKNLVL 235

Query: 103 LIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            I  S   P    + S D R  +S+ F R  + R +   +L   F
Sbjct: 236 KII-SGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGF 279

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 68.9 bits (169), Expect = 8e-15
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 51/177 (28%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--------EAEISAFL 56
           L E +I    + +L+ L ++H+ G++H DI+ D+ LL    D           A+IS  +
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL--TLDGRVKLSDFGFCAQISKDV 195

Query: 57  QRHGLL----------LI------YHVDTWALGRVFVEMMTAE--------ISAWGSFGR 92
            +   L          +I        VD W+LG + +EM+  E        + A      
Sbjct: 196 PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA------ 249

Query: 93  GLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                   ++ +   S  P+      +S   RDFL +  +R  Q R TA+ +L HPF
Sbjct: 250 --------MKRLR-DSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 66.6 bits (163), Expect = 4e-14
 Identities = 42/179 (23%), Positives = 66/179 (36%), Gaps = 46/179 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEA 50
           +GL E +I    + +L  L+ +HS  ++H D++  N L+            V+ K+    
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171

Query: 51  ---------------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
                          E+            Y  D W+LG   +EM  A+            
Sbjct: 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM--AQ---------IEP 220

Query: 96  SRDDL-----LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              +L     L  IA  S+ P    PS  S + RDFL     +  + R +A  +L HPF
Sbjct: 221 PHHELNPMRVLLKIA-KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 66.2 bits (162), Expect = 6e-14
 Identities = 24/170 (14%), Positives = 52/170 (30%), Gaps = 41/170 (24%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEA 50
           + L +       + I +G+D+IHS  L++ D++  N  L            +     ++ 
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 176

Query: 51  EISAFL-------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           + +                Q +G      VD +ALG +  E++    +A+          
Sbjct: 177 KRTRSKGTLRYMSPEQISSQDYG----KEVDLYALGLILAELLHVCDTAF--------ET 224

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                 +              +  +  L K   +  + R     +L    
Sbjct: 225 SKFFTDL----RDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 45/176 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--------EAEISA 54
           K L E EI    +  L+GL+++H    +H DI+  N LL    + H          +++ 
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL--NTEGHAKLADFGVAGQLTD 177

Query: 55  FLQRHGLL----------LI------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
            + +   +          +I         D W+LG   +EM  AE         G     
Sbjct: 178 TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM--AE---------GKPPYA 226

Query: 99  DL-----LELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           D+     + +I  ++  P F  P   S++  DF+ +C ++  + R TA  +L HPF
Sbjct: 227 DIHPMRAIFMIP-TNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 37/176 (21%)

Query: 2   AKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLL------------VAGK-DA 47
              +PE  +G+ T  I++ L ++   HG++H D++  N LL            ++G+   
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177

Query: 48  HEA-------------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSF-GRG 93
            +A             E                D W+LG   VE+      A G F  + 
Sbjct: 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL------ATGQFPYKN 231

Query: 94  LASRDDLLELIAFSSEVPEFPSNI--SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +  ++L  +    E P  P ++  S D + F+  C  + H+ R     +L H F
Sbjct: 232 CKTDFEVLTKVL-QEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 64.3 bits (157), Expect = 3e-13
 Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 45/179 (25%)

Query: 2   AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHE 49
              L E  I    ++ILRGL H+H H ++H DI+G N LL            V+ +    
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182

Query: 50  A---------------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL 94
                           E+ A  +       +  D W+LG   +EM  AE         G 
Sbjct: 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM--AE---------GA 231

Query: 95  ASRDDL-----LELIAFSSEVPEF-PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               D+     L LI   +  P       S+  + F+  C ++ H  R   + ++ HPF
Sbjct: 232 PPLCDMHPMRALFLIP-RNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 64.7 bits (157), Expect = 3e-13
 Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 24/166 (14%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGKDAHE 49
                +   T  ++R   ++ S GLVH     DN  +                 G     
Sbjct: 191 EGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPA 250

Query: 50  AEISA------FLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
           + +        FL        + ++ W LG     +       +G    G+        L
Sbjct: 251 SSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF-LPFGLVTPGIKGSWKRPSL 309

Query: 104 IAFSSEVPEFPS--NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               ++   F S   + +  +  + +      + R      +  P 
Sbjct: 310 RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE 355

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 63.8 bits (156), Expect = 4e-13
 Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 45/179 (25%)

Query: 2   AKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLL------------VAGK-DA 47
            + +PE  +G+    I++ L+H+HS   ++H D++  N L+            ++G    
Sbjct: 103 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162

Query: 48  HEAE--------------ISAFLQRHGLLLIYHV--DTWALGRVFVEMMTAE--ISAWGS 89
             A+              I+  L + G    Y V  D W+LG   +E+        +WG+
Sbjct: 163 DVAKDIDAGCKPYMAPERINPELNQKG----YSVKSDIWSLGITMIELAILRFPYDSWGT 218

Query: 90  FGRGLASRDDLLELIAFSSEVPEFPSNI-SEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                      L+ +      P+ P++  S +  DF S+C  +  + R T   ++ HPF
Sbjct: 219 P-------FQQLKQVV-EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 63.6 bits (155), Expect = 6e-13
 Identities = 45/176 (25%), Positives = 68/176 (38%), Gaps = 47/176 (26%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEA 50
           K L E EI   T   L+GL ++HSH ++H D++  N LL             A   A   
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208

Query: 51  -----------EISAFLQRHGLLLIYH--VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                      E+   +        Y   VD W+LG   +E+  AE              
Sbjct: 209 SFVGTPYWMAPEVILAMDEGQ----YDGKVDVWSLGITCIEL--AE---------RKPPL 253

Query: 98  DDL-----LELIAFSSEVPEF-PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            ++     L  IA  +E P     + SE  R+F+  C  ++ Q R T++ +L H F
Sbjct: 254 FNMNAMSALYHIA-QNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 43/175 (24%)

Query: 2   AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--------EAEIS 53
              L E +I    ++IL+GLD++HS   +H DI+  N LL   +             +++
Sbjct: 113 PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL--SEHGEVKLADFGVAGQLT 170

Query: 54  AFLQRHGLL----------LI------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
               +              +I         D W+LG   +E+  A          G    
Sbjct: 171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL--AR---------GEPPH 219

Query: 98  DDL-----LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +L     L LI   +  P    N S+  ++F+  C  +    R TAK +L H F
Sbjct: 220 SELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 61.7 bits (150), Expect = 4e-12
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 56/197 (28%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
           + K   E+      + I  G+ H+HS  ++H D++  N +LV+      A+     +   
Sbjct: 108 NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN-ILVSTSSRFTADQQTGAENLR 166

Query: 61  LLLI---------------------------YH--------------------VDTWALG 73
           +L+                            +                     +D +++G
Sbjct: 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226

Query: 74  RVFVEMMTAEISAWGS--FGRGLASRDDLLELI-AFSSEVPEFPSNISEDGRDFLSKCFI 130
            VF  +++      G   FG   +   +++  I +          ++  +  D +S+   
Sbjct: 227 CVFYYILSK-----GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMID 281

Query: 131 RVHQLRWTAKHVLAHPF 147
                R TA  VL HP 
Sbjct: 282 HDPLKRPTAMKVLRHPL 298

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 39/181 (21%), Positives = 65/181 (35%), Gaps = 48/181 (26%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLL------------VAGK---- 45
             +PE  +G+ T   ++ L+H+     ++H DI+  N LL            ++G+    
Sbjct: 120 DVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179

Query: 46  --DAHEA--------E-ISAFLQRHGLLLIYHV--DTWALGRVFVEMMTAE--ISAWGSF 90
                +A        E I     R G    Y V  D W+LG    E+ T       W S 
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQG----YDVRSDVWSLGITLYELATGRFPYPKWNSV 235

Query: 91  GRGLASRDDLLELIAFSSEVPEFPSNI----SEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
                     L  +    + P+  ++     S    +F++ C  +    R   K +L HP
Sbjct: 236 FD-------QLTQVV-KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHP 287

Query: 147 F 147
           F
Sbjct: 288 F 288

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 60.4 bits (147), Expect = 8e-12
 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 47/182 (25%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEI 52
               E  R  + IL  L +IHS G++H D++  N  +            +A       +I
Sbjct: 113 QQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172

Query: 53  SAFLQRHGLLLIYH-------------------------VDTWALGRVFVEMMTAEISAW 87
                ++      +                         +D ++LG +F EM+    +  
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG- 231

Query: 88  GSFGRGLASRDDLLELI--AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
                    R ++L+ +        P+F  N  +  +  +          R  A+ +L  
Sbjct: 232 -------MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284

Query: 146 PF 147
            +
Sbjct: 285 GW 286

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 36/188 (19%), Positives = 61/188 (32%), Gaps = 52/188 (27%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAH 48
            +  L E  I    +++L GL+++H +G +H D++  N LL            V+   A 
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173

Query: 49  EAEISAFLQRH----------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGR 92
             +I+    R                      +  D W+ G   +E+ T           
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT----------- 222

Query: 93  GLASRDDL-----LELIAFSS--------EVPEFPSNISEDGRDFLSKCFIRVHQLRWTA 139
           G A          L L   +         +  E      +  R  +S C  +  + R TA
Sbjct: 223 GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTA 282

Query: 140 KHVLAHPF 147
             +L H F
Sbjct: 283 AELLRHKF 290

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 58.5 bits (141), Expect = 5e-11
 Identities = 28/172 (16%), Positives = 50/172 (29%), Gaps = 41/172 (23%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAH---- 48
           L  H   + T  ++R L  +H +GLVH  ++  + +L               +D      
Sbjct: 203 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVS 262

Query: 49  -------------EAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
                             ++ +    L+ +  D WALG V   +  A++           
Sbjct: 263 SVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKD------ 316

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           +     E I           NI +  R  L        + R      +  P 
Sbjct: 317 AALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 362

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 20/177 (11%), Positives = 46/177 (25%), Gaps = 43/177 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDN-----------------TLLVAGKDA 47
                       I   ++ +HS GL+H D++  N                 T +   ++ 
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174

Query: 48  HEAEISAFLQRHGLLLI-----------------YHVDTWALGRVFVEMMTAEISAWGSF 90
                           +                 + VD ++LG +  E++         F
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP-------F 227

Query: 91  GRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
              +  R   L  +  + + P   +         +          R  A +++ +  
Sbjct: 228 STQM-ERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV 282

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 54.6 bits (132), Expect = 9e-10
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 34/170 (20%)

Query: 5   LPEHEIGRYTKDILRGLDHIHS-----HGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQ 57
           L E  + R    +   L   H      H ++H D++  N  L   ++    +  ++  L 
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167

Query: 58  RHGLLLI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                                         D W+LG +  E+       + +F     S+
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM-PPFTAF-----SQ 221

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +L   I    +    P   S++  + +++        R + + +L +P 
Sbjct: 222 KELAGKIR-EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 54.8 bits (132), Expect = 9e-10
 Identities = 31/200 (15%), Positives = 57/200 (28%), Gaps = 54/200 (27%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------- 50
           +A GLPE E     +D++ G++H+  +G+VH +I+  N + V G+D              
Sbjct: 105 NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164

Query: 51  --------------------EISAFLQRHGLLLIYH---VDTWALGRVFVEMMT------ 81
                               ++             +   VD W++G  F    T      
Sbjct: 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224

Query: 82  ------------AEISAWGSFGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLS 126
                        +I      G     +      I +S ++P        +       L+
Sbjct: 225 PFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA 284

Query: 127 KCFIRVHQLRWTAKHVLAHP 146
                  +  W      A  
Sbjct: 285 NILEADQEKCWGFDQFFAET 304

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 53.7 bits (129), Expect = 2e-09
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 41/172 (23%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-----SAFLQRH 59
           + E E   Y + + +GL H+H +  VH D++ +N ++   K ++E ++     +A L   
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN-IMFTTKRSNELKLIDFGLTAHLDPK 310

Query: 60  GLLLI-------------------YHVDTWALGRVFVEMMTAEISA-WGSFGRGLASRDD 99
             + +                   Y+ D W++G V   ++ + +S   G       + D+
Sbjct: 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG-VLSYILLSGLSPFGG------ENDDE 363

Query: 100 LLELIA-----FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            L  +             F   ISEDG+DF+ K  +     R T    L HP
Sbjct: 364 TLRNVKSCDWNMDDS--AFS-GISEDGKDFIRKLLLADPNTRMTIHQALEHP 412

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 36/163 (22%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEISAF----- 55
           +  +++  LD++ +  ++H D++ DN LL            +A     E +I+       
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP 179

Query: 56  -------LQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGS---FGRGLASRDDLLELIA 105
                    R G    + VD W+LG    E++       G      R   S  +++    
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR------GRRPYHIRSSTSSKEIVHTFE 233

Query: 106 FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-TAKHVLAHPF 147
            +     +PS  S++    L K        R+     V   P+
Sbjct: 234 TTV--VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 52.0 bits (125), Expect = 7e-09
 Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 41/172 (23%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-----SAFLQRH 59
           + E E+  Y +    GL H+H H +VH DI+ +N ++   K A   +I     +  L   
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN-IMCETKKASSVKIIDFGLATKLNPD 204

Query: 60  GLLLI-------------------YHVDTWALGRVFVEMMTAEISA-WGSFGRGLASRDD 99
            ++ +                   ++ D WA+G V   ++ + +S   G          +
Sbjct: 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIG-VLGYVLLSGLSPFAG------EDDLE 257

Query: 100 LLELIA-----FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            L+ +      F  +   F  ++S + +DF+     +  + R T    L HP
Sbjct: 258 TLQNVKRCDWEFDED--AFS-SVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.0 bits (125), Expect = 8e-09
 Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 47/180 (26%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------------VAGKD 46
           L E +I      I RGL+ IH+ G  H D++  N LL                  +  + 
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190

Query: 47  AHEA-EISAFLQRHG--------LLLIYH-------VDTWALGRVFVEMMTAEISAWGSF 90
           + +A  +  +  +          L  +          D W+LG V   MM         F
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM---------F 241

Query: 91  GR----GLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           G      +  + D + L   +          S      L+         R     +L+  
Sbjct: 242 GEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 51.8 bits (124), Expect = 1e-08
 Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 57/203 (28%)

Query: 2   AKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQR 58
           A  +PE  +G+ +  +++GL ++   H ++H D++  N L+ +  +    +  +S  L  
Sbjct: 125 AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184

Query: 59  ------------------HGLLLIYHVDTWALGRVFVEMMTAE----------------- 83
                              G       D W++G   VEM                     
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 244

Query: 84  ----------------ISAWGSFGRGLASRDDLLELIAF--SSEVPEFPSNI-SEDGRDF 124
                                 FG        + EL+ +  +   P+ PS + S + +DF
Sbjct: 245 QVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 304

Query: 125 LSKCFIRVHQLRWTAKHVLAHPF 147
           ++KC I+    R   K ++ H F
Sbjct: 305 VNKCLIKNPAERADLKQLMVHAF 327

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 19/176 (10%), Positives = 45/176 (25%), Gaps = 43/176 (24%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEIS 53
                      I   ++ +HS GL+H D++  N               +      + E  
Sbjct: 162 EHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221

Query: 54  AFLQRHGLLLIYH----------------------VDTWALGRVFVEMMTAEISAWGSFG 91
             L        +                       VD ++LG +  E++ +  +      
Sbjct: 222 TVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ----- 276

Query: 92  RGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                R  ++  +  + + P   +         +          R  A  ++ +  
Sbjct: 277 ---MERVRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI 328

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
            G+ E  I    + +L+ LD+IH  G VH  ++  + L+
Sbjct: 123 DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI 161

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 12/70 (17%), Positives = 22/70 (31%)

Query: 78  EMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW 137
           E+  +   +  + G   +            S    +    S     F+ +C  R    R 
Sbjct: 267 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 326

Query: 138 TAKHVLAHPF 147
           +A  +L H F
Sbjct: 327 SASTLLNHSF 336

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 51.2 bits (122), Expect = 2e-08
 Identities = 30/171 (17%), Positives = 49/171 (28%), Gaps = 40/171 (23%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGKDAHE 49
           L  H   + T  ++R L  +H +GLVH  ++  + +L                 G  A  
Sbjct: 208 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVS 267

Query: 50  A-------------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
                          +  F Q H  L+ +  DTW LG     +                +
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC---------ADLPNT 318

Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            D  L    +   +     NI +  R  L        + R      +  P 
Sbjct: 319 DDAALGGSEW---IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 366

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 54/199 (27%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------- 50
           +A GLPE E     +D++ G++H+  +G+VH +I+  N + V G+D              
Sbjct: 105 NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164

Query: 51  --------------------EISAFLQRHGLLLIYH---VDTWALGRVFVEMMT------ 81
                               ++             +   VD W++G  F    T      
Sbjct: 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224

Query: 82  ------------AEISAWGSFGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLS 126
                        +I      G     +      I +S ++P        +       L+
Sbjct: 225 PFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA 284

Query: 127 KCFIRVHQLRWTAKHVLAH 145
                  +  W      A 
Sbjct: 285 NILEADQEKCWGFDQFFAE 303

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 41/172 (23%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLI 64
             E +     K +L G+ ++H H +VH D++ +N LL + +     +I  F    GL  +
Sbjct: 133 FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDF----GLSAV 188

Query: 65  YH---------------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           +                             D W++G +   ++       G       + 
Sbjct: 189 FENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQ------TD 242

Query: 98  DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            ++L  +    ++ + PE+  N+SE  +D + +      Q R +A+  L HP
Sbjct: 243 QEILRKVEKGKYTFDSPEWK-NVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 32/172 (18%), Positives = 67/172 (38%), Gaps = 39/172 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
           L E E   + K IL G++++H+  + H D++ +N +++  K+     I       +  ++
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN-IMLLDKNIPIPHIKLIDFGLAHEIE 170

Query: 58  RHGLLLI-------------------YHVDTWALGRVFVEMMTAEISA-WGSFGRGLASR 97
                                        D W++G V   ++ +  S   G       ++
Sbjct: 171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-VITYILLSGASPFLGD------TK 223

Query: 98  DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            + L  I   ++  +   F  + SE  +DF+ K  ++  + R T +  L HP
Sbjct: 224 QETLANITSVSYDFDEEFFS-HTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 37/206 (17%), Positives = 62/206 (30%), Gaps = 68/206 (33%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAF-LQ 57
               +    I  +   ++ G++  HS   +H D++  N LL     +      I  F L 
Sbjct: 125 KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184

Query: 58  R----------HG----------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGR 92
           R          H           +LL    Y   VD W++  ++ EM+            
Sbjct: 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM---------KT 235

Query: 93  GL---ASRDDLLELI-------------------AFSSEVP---------EFPSNISEDG 121
            L    S  D L  I                    +    P            + + ++G
Sbjct: 236 PLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEG 295

Query: 122 RDFLSKCFIRVHQLRWTAKHVLAHPF 147
            D L+         R +AK+ L HP+
Sbjct: 296 LDLLTAMLEMDPVKRISAKNALEHPY 321

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 50.1 bits (120), Expect = 4e-08
 Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 41/172 (23%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLI 64
             E +  R  + +L G+ ++H + +VH D++ +N LL +        I  F    GL   
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF----GLSTH 178

Query: 65  YH---------------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           +                             D W+ G +   +++      G+      + 
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGA------NE 232

Query: 98  DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            D+L+ +    ++ E+P++   +SE  +D + K    V  +R +A+  L H 
Sbjct: 233 YDILKKVEKGKYTFELPQWK-KVSESAKDLIRKMLTYVPSMRISARDALDHE 283

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 49.7 bits (119), Expect = 5e-08
 Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 45/174 (25%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLI 64
           L E +   + K I  G+ H+H   ++H D++ +N +L   +DA + +I  F    GL   
Sbjct: 184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPEN-ILCVNRDAKQIKIIDF----GLARR 238

Query: 65  YH----------------------------VDTWALGRVFVEMMTAEISA-WGSFGRGLA 95
           Y                              D W++G V   M+ + +S   G       
Sbjct: 239 YKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVG-VIAYMLLSGLSPFLG------D 291

Query: 96  SRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           +  + L  I    +  E  EF  +ISE+ ++F+SK  I+    R +A   L HP
Sbjct: 292 NDAETLNNILACRWDLEDEEFQ-DISEEAKEFISKLLIKEKSWRISASEALKHP 344

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 49.9 bits (119), Expect = 5e-08
 Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 41/173 (23%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEA---- 50
            E ++  Y  +I+ GL+H+H+  +V+ D++  N LL               D  +     
Sbjct: 290 SEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349

Query: 51  ----------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSF-GRGLASRDD 99
                     E+      +        D ++LG +  +++         F       + +
Sbjct: 350 SVGTHGYMAPEVLQKGVAYD----SSADWFSLGCMLFKLLRG----HSPFRQHKTKDKHE 401

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
           +  +    +   E P + S + R  L     R    R       A+ V   PF
Sbjct: 402 IDRMTL--TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 49.3 bits (118), Expect = 7e-08
 Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 39/172 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
           L E E   + K IL G++++H+  + H D++ +N +++  K+     I       +  ++
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN-IMLLDKNIPIPHIKLIDFGLAHEIE 170

Query: 58  RHGLLLI-------------------YHVDTWALGRVFVEMMTAEISA-WGSFGRGLASR 97
                                        D W++G V   ++ +  S   G       ++
Sbjct: 171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-VITYILLSGASPFLG------DTK 223

Query: 98  DDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            + L  I   ++  +   F    SE  +DF+ K  ++  + R T +  L HP
Sbjct: 224 QETLANITAVSYDFDEEFFS-QTSELAKDFIRKLLVKETRKRLTIQEALRHP 274

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 66/211 (31%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEA----------- 50
           +G+P   + + +K +L GLD++H   G++H DI+ +N L+                    
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185

Query: 51  -----EISAFLQ-RH--------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
                  +  +Q R         G       D W+   +  E++T +       G     
Sbjct: 186 CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245

Query: 97  RDDLL------------ELIAFSSEVPEF------PSNISEDGR---------------- 122
            DD +             L+        F        NIS+                   
Sbjct: 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305

Query: 123 ------DFLSKCFIRVHQLRWTAKHVLAHPF 147
                 DFLS       + R  A  ++ HP+
Sbjct: 306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPW 336

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 21/103 (20%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA-----------HEAE 51
           +G     + ++   IL+ LD +H + ++HCD++ +N LL     +           +E +
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254

Query: 52  -ISAFLQ-RH--------GLLLIYHVDTWALGRVFVEMMTAEI 84
            +  ++Q R         G      +D W+LG +  E++T   
Sbjct: 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 33/176 (18%), Positives = 53/176 (30%), Gaps = 40/176 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------- 48
             E  I    + I   L ++H+ G+ H DI+ +N L    K                   
Sbjct: 165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN 224

Query: 49  EAEISAFLQRHG---------LLLIYH-----VDTWALGRVFVEMMTAEISAWGSFGRGL 94
             E      + G         L           D W+ G +   ++   +   G      
Sbjct: 225 NGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGV----- 279

Query: 95  ASRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +  D +  +       E P +   +S   RD LS    R    R+ A   L HP+
Sbjct: 280 -NDADTISQVLNKKLCFENPNYNV-LSPLARDLLSNLLNRNVDERFDAMRALQHPW 333

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 32/174 (18%), Positives = 65/174 (37%), Gaps = 43/174 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
           L E E   + K IL G+ ++HS  + H D++ +N +++  ++  +  I       +  + 
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN-IMLLDRNVPKPRIKIIDFGLAHKID 169

Query: 58  RHGLLLI-------------------YHVDTWALGRVFVEMMTAEISA-WGSFGRGLASR 97
                                        D W++G V   ++ +  S   G       ++
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-VITYILLSGASPFLGD------TK 222

Query: 98  DDLLELIA-----FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            + L  ++     F  E   F  N S   +DF+ +  ++  + R T +  L HP
Sbjct: 223 QETLANVSAVNYEFEDE--YFS-NTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 44/204 (21%), Positives = 66/204 (32%), Gaps = 72/204 (35%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHG- 60
           +G+PEH +   T   L+ ++  H H  +H D++ +N +L+        ++  F   R   
Sbjct: 97  RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPEN-ILITKHS--VIKLCDFGFARLLT 153

Query: 61  -------------------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                              LL+    Y   VD WA+G VF E+++         G  L  
Sbjct: 154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS---------GVPLWP 204

Query: 95  -ASRDDLLELIAFS-------------SEVPEFPS-----------------NISEDGRD 123
             S  D L LI                S    F                   NIS     
Sbjct: 205 GKSDVDQLYLI-RKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALG 263

Query: 124 FLSKCFIRVHQLRWTAKHVLAHPF 147
            L  C       R T + +L HP+
Sbjct: 264 LLKGCLHMDPTERLTCEQLLHHPY 287

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 35/172 (20%), Positives = 56/172 (32%), Gaps = 45/172 (26%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y+ +I   L+++H  G+++ D++ DN LL    + H                   S F  
Sbjct: 115 YSAEISLALNYLHERGIIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLRPGDTTSTFCG 172

Query: 56  ---------LQRHGLLLIY--HVDTWALGRVFVEMMTAE---ISAWGSFGRGLASRDDLL 101
                    L+       Y   VD WALG +  EMM           S      + D L 
Sbjct: 173 TPNYIAPEILRGED----YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 228

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR------WTAKHVLAHPF 147
           ++I         P ++S      L     +  + R           +  HPF
Sbjct: 229 QVILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 41/173 (23%), Positives = 62/173 (35%), Gaps = 57/173 (32%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y  +I+  L+++HS  +V+ DI+ +N +L   KD H                A +  F  
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCG 167

Query: 56  ---------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLA-----SRDD 99
                    L+ +     Y   VD W LG V  EMM            G         + 
Sbjct: 168 TPEYLAPEVLEDND----YGRAVDWWGLGVVMYEMMC-----------GRLPFYNQDHER 212

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
           L ELI        FP  +S + +  L+    +  + R       AK V+ H F
Sbjct: 213 LFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 48/176 (27%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLI 64
           + E+++ R  K IL G+ ++H + +VH D++  N LL +     + +I  F    G+   
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF----GMSRK 183

Query: 65  YH----------------------------VDTWALGRVFVEMMTAEISA-WGSFGRGLA 95
                                          D W +G +   M+    S   G       
Sbjct: 184 IGHACELREIMGTPEYLAPEILNYDPITTATDMWNIG-IIAYMLLTHTSPFVG------E 236

Query: 96  SRDDLLELIA-----FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
              +    I+     +S     F  ++S+   DF+    ++  + R TA+  L+H 
Sbjct: 237 DNQETYLNISQVNVDYSE--ETFS-SVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 35/172 (20%), Positives = 56/172 (32%), Gaps = 45/172 (26%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y+ +I   L+++H  G+++ D++ DN LL    + H                   S F  
Sbjct: 158 YSAEISLALNYLHERGIIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLRPGDTTSTFCG 215

Query: 56  ---------LQRHGLLLIY--HVDTWALGRVFVEMMTAE---ISAWGSFGRGLASRDDLL 101
                    L+       Y   VD WALG +  EMM           S      + D L 
Sbjct: 216 TPNYIAPEILRGED----YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR------WTAKHVLAHPF 147
           ++I         P ++S      L     +  + R           +  HPF
Sbjct: 272 QVILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 321

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.5 bits (111), Expect = 5e-07
 Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 41/172 (23%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-----SAFLQRH 59
           L E EI  Y   +   L  +HSH + H DI+ +N ++   + +   +I     +  L+  
Sbjct: 99  LNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN-IIYQTRRSSTIKIIEFGQARQLKPG 157

Query: 60  GLLLI-------------------YHVDTWALGRVFVEMMTAEISA-WGSFGRGLASRDD 99
               +                      D W+LG   V ++ + I+           +   
Sbjct: 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG-TLVYVLLSGINPFLA------ETNQQ 210

Query: 100 LLELI-----AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           ++E I      F  E   F   IS +  DF+ +  ++  + R TA   L HP
Sbjct: 211 IIENIMNAEYTFDEE--AFK-EISIEAMDFVDRLLVKERKSRMTASEALQHP 259

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 62/182 (34%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E     Y + IL  L + H + ++H D++    +L+A K+ + A +       +  L   
Sbjct: 129 EAVASHYMRQILEALRYCHDNNIIHRDVKPHC-VLLASKE-NSAPVKLGGFGVAIQLGES 186

Query: 60  GLLL------------------IYH--VDTWALGRV-----------FVEMMTAEISAWG 88
           GL+                    Y   VD W  G V           F          +G
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCG-VILFILLSGCLPF----------YG 235

Query: 89  SFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
           +       ++ L E I    +     ++  +ISE  +D + +  +     R T    L H
Sbjct: 236 T-------KERLFEGIIKGKYKMNPRQWS-HISESAKDLVRRMLMLDPAERITVYEALNH 287

Query: 146 PF 147
           P+
Sbjct: 288 PW 289

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 46.7 bits (111), Expect = 6e-07
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 43/178 (24%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-------------- 48
            G  E     YT  I+ GL+H+H   +++ D++ +N LL    D +              
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL--DDDGNVRISDLGLAVELKA 341

Query: 49  -EAEISAFL-------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL 94
            + +   +              + +     + VD +ALG    EM+ A    + + G  +
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYD----FSVDYFALGVTLYEMIAAR-GPFRARGEKV 396

Query: 95  ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
               +L + +    +   +P   S   +DF      +  + R      +   +  HP 
Sbjct: 397 -ENKELKQRVL--EQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 43/174 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
           L E E  ++ K IL G+ ++HS  + H D++ +N +++  K+     I       +  ++
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPEN-IMLLDKNVPNPRIKLIDFGIAHKIE 163

Query: 58  RHGLL--------------LIYH-----VDTWALGRVFVEMMTAEISA-WGSFGRGLASR 97
                              + Y       D W++G V   ++ +  S   G       ++
Sbjct: 164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG-VITYILLSGASPFLG------ETK 216

Query: 98  DDLLELIA-----FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
            + L  I+     F      F  N SE  +DF+ +  ++  + R T    L H 
Sbjct: 217 QETLTNISAVNYDFDE--EYFS-NTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 46.1 bits (110), Expect = 8e-07
 Identities = 37/199 (18%), Positives = 70/199 (35%), Gaps = 59/199 (29%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRHG--- 60
           L +++I  Y  +IL+ LD+ HS G++H D++  N ++    +  +  +  + L       
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPG 184

Query: 61  ----------------LLLIYH-----VDTWALGRVFVEMM------------------- 80
                           LL+ Y      +D W+LG +   M+                   
Sbjct: 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 244

Query: 81  -----TAEISAWGSFGRGLASRDDLLELIAFSSEVP-------EFPSNISEDGRDFLSKC 128
                T ++  +      +       +++   S          E    +S +  DFL K 
Sbjct: 245 AKVLGTEDLYDYIDK-YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKL 303

Query: 129 FIRVHQLRWTAKHVLAHPF 147
               HQ R TA+  + HP+
Sbjct: 304 LRYDHQSRLTAREAMEHPY 322

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 46.1 bits (109), Expect = 9e-07
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL 62
           K +P+  +  +   +L  ++ +H   ++H DI+ DN +L    +    +        GL 
Sbjct: 167 KVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFIL---GNGFLEQDDEDDLSAGLA 223

Query: 63  LI 64
           LI
Sbjct: 224 LI 225

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 46.2 bits (110), Expect = 9e-07
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 39/171 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
             E +     K IL G+ ++H H +VH DI+ +N LL          I       S+F  
Sbjct: 143 FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS--LLNIKIVDFGLSSFFS 200

Query: 58  RHGLLL-----IYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           +   L       Y++             D W+ G +   ++       G       +  D
Sbjct: 201 KDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQ------NDQD 254

Query: 100 LLELIAFSSEVPEFPS----NISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           +++ +        F      NIS++ ++ +       +  R TA+  L   
Sbjct: 255 IIKKV--EKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 38/175 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAE 51
            G PE     Y  +I  GL+ +H   +V+ D++ +N LL                  E +
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340

Query: 52  -ISAFL-------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
            I   +             +R+     +  D WALG +  EM+  + S +    + +  R
Sbjct: 341 TIKGRVGTVGYMAPEVVKNERYT----FSPDWWALGCLLYEMIAGQ-SPFQQRKKKI-KR 394

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
           +++  L+       E+    S   R   S+   +    R      +A+ V  HP 
Sbjct: 395 EEVERLVK--EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 37/168 (22%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           EH+  R  K +  G+ ++H H +VH D++ +N LL + +   + +I       S   Q++
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK--DCDIKIIDFGLSTCFQQN 177

Query: 60  GLLL-----IYHV-------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
             +       Y++             D W+ G +   +++     +G       +  D+L
Sbjct: 178 TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGK------NEYDIL 231

Query: 102 ELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           + +    ++ ++P++   IS+D +D + K       LR TA   L HP
Sbjct: 232 KRVETGKYAFDLPQWR-TISDDAKDLIRKMLTFHPSLRITATQCLEHP 278

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 47/168 (27%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y  +I  GL  + S G+++ D++ DN +L    + H                     F  
Sbjct: 447 YAAEIAIGLFFLQSKGIIYRDLKLDNVML--DSEGHIKIADFGMCKENIWDGVTTKTFCG 504

Query: 56  ---------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
                    +        Y   VD WA G +  EM+  +    G         D+L + I
Sbjct: 505 TPDYIAPEIIAYQP----YGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELFQSI 554

Query: 105 AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
              +    +P ++S++          +    R        + +  H F
Sbjct: 555 MEHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 600

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 44/203 (21%), Positives = 63/203 (31%), Gaps = 70/203 (34%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR--- 58
            GL    + +Y   I+ G+   HSH ++H DI+ +N +LV+       ++  F   R   
Sbjct: 119 NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPEN-ILVSQSG--VVKLCDFGFARTLA 175

Query: 59  -------HG----------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                              LL+    Y   VD WA+G +  EM           G  L  
Sbjct: 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM---------GEPLFP 226

Query: 95  -ASRDDLLELI-------------AFSS-------EVPEFP---------SNISEDGRDF 124
             S  D L  I              F+         +PE             +SE   D 
Sbjct: 227 GDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDL 286

Query: 125 LSKCFIRVHQLRWTAKHVLAHPF 147
             KC       R     +L H F
Sbjct: 287 AKKCLHIDPDKRPFCAELLHHDF 309

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 41/174 (23%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E E       I + ++++H+ G+VH D++  N +L   +  +   I       +  L+  
Sbjct: 115 EREASAVLFTITKTVEYLHAQGVVHRDLKPSN-ILYVDESGNPESIRICDFGFAKQLRAE 173

Query: 60  GLLL------------------IYH--VDTWALGRVFVEMMTAEISAWGS---FGRGLAS 96
             LL                   Y    D W+LG V +  M       G          +
Sbjct: 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLG-VLLYTMLT-----GYTPFANGPDDT 227

Query: 97  RDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +++L  I    FS     +  ++S+  +D +SK        R TA  VL HP+
Sbjct: 228 PEEILARIGSGKFSLSGGYWN-SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 48/169 (28%)

Query: 13  YTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF- 55
           Y  +I+  LD++HS   +V+ D++ +N +L   KD H                A +  F 
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFC 310

Query: 56  ----------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
                     L+ +     Y   VD W LG V  EMM   +  +          + L EL
Sbjct: 311 GTPEYLAPEVLEDND----YGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFEL 360

Query: 104 IAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
           I    E   FP  +  + +  LS    +  + R       AK ++ H F
Sbjct: 361 IL--MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 38/174 (21%), Positives = 58/174 (33%), Gaps = 58/174 (33%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y  +I+  L  +H  G+++ D++ DN LL    + H                   + F  
Sbjct: 129 YAAEIISALMFLHDKGIIYRDLKLDNVLL--DHEGHCKLADFGMCKEGICNGVTTATFCG 186

Query: 56  ---------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLA-----SRDD 99
                    LQ       Y   VD WA+G +  EM+            G A     + DD
Sbjct: 187 TPDYIAPEILQEML----YGPAVDWWAMGVLLYEMLC-----------GHAPFEAENEDD 231

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR------WTAKHVLAHPF 147
           L E I        +P+ + ED    L     +   +R           +L HPF
Sbjct: 232 LFEAILNDE--VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 49/183 (26%)

Query: 2   AKG-LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
               L E     Y   +L  + ++H +G++H D++ +N LL + ++    +I+ F    G
Sbjct: 232 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF----G 287

Query: 61  LLLIYH-------------------------------VDTWALGRVFVEMMTAEISAWGS 89
              I                                 VD W+LG +    ++      G 
Sbjct: 288 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS------GY 341

Query: 90  --FGRGLASRDDLLELIA---FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
             F     ++  L + I    ++     +   +SE   D + K  +   + R+T +  L 
Sbjct: 342 PPFSEHR-TQVSLKDQITSGKYNFIPEVWA-EVSEKALDLVKKLLVVDPKARFTTEEALR 399

Query: 145 HPF 147
           HP+
Sbjct: 400 HPW 402

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG 44
           LP  E   Y  +IL  L ++HS GLV+ D++ +N +L   
Sbjct: 179 LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 56/183 (30%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E E     + ++  + H+H  G+VH D++ +N LL   ++    EI       +      
Sbjct: 105 ETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN-LLFTDEN-DNLEIKIIDFGFARLKPPD 162

Query: 60  GLLL------------------IYH--VDTWALGRV-----------FVEMMTAEISAWG 88
              L                   Y    D W+LG V           F            
Sbjct: 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLG-VILYTMLSGQVPF----------QS 211

Query: 89  -SFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
                   S  ++++ I    FS E   +  N+S++ +D +          R     +  
Sbjct: 212 HDRSLTCTSAVEIMKKIKKGDFSFEGEAWK-NVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270

Query: 145 HPF 147
           + +
Sbjct: 271 NEW 273

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 45/204 (22%), Positives = 66/204 (32%), Gaps = 70/204 (34%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------SA 54
             + +P   I  Y   +LR L +IHS G+ H DI+  N LL    D     +      SA
Sbjct: 134 LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL----DPPSGVLKLIDFGSA 189

Query: 55  FLQRHG----------------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGR- 92
            +   G                L+     Y  ++D W+ G V  E+M          G+ 
Sbjct: 190 KILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ---------GQP 240

Query: 93  ---GLASRDDLLELIAF-----SSEVPE---------------------FPSNISEDGRD 123
              G +  D L+E+I         ++                       F      D  D
Sbjct: 241 LFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAID 300

Query: 124 FLSKCFIRVHQLRWTAKHVLAHPF 147
            +S+        R TA   L HPF
Sbjct: 301 LISRLLEYTPSARLTAIEALCHPF 324

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 55/172 (31%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y  ++   LDH+HS G+++ D++ +N LL   ++ H               E +  +F  
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEKKAYSFCG 188

Query: 56  ---------LQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGS---FGRGLASRDDL 100
                    + R G     H    D W+ G +  EM+T      G+    G+    R + 
Sbjct: 189 TVEYMAPEVVNRRG-----HTQSADWWSFGVLMFEMLT------GTLPFQGK---DRKET 234

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
           + +I  +      P  +S + +  L   F R    R        + +  H F
Sbjct: 235 MTMILKAK--LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 54/176 (30%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-EAEISAF-------- 55
             E     Y  ++   L + HS  ++H DI+ +N LL     +  E +I+ F        
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPS 161

Query: 56  -----------------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLA- 95
                            ++       +   VD W+LG +  E +            G   
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRM----HDEKVDLWSLGVLCYEFLV-----------GKPP 206

Query: 96  ----SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               +  +  + I    E   FP  ++E  RD +S+        R   + VL HP+
Sbjct: 207 FEANTYQETYKRI-SRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 44/174 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-EAEI-----SAFL 56
           K L E E   Y + I+ G  ++H + ++H D++  N  L    +   E +I     +  +
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 191

Query: 57  QRHGLLLI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
           +  G                        + VD W++G +   ++          G+    
Sbjct: 192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV---------GK-PPF 241

Query: 97  RDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               L+        +E    P +I+      + K        R T   +L   F
Sbjct: 242 ETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 35/156 (22%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAH 48
           S   +PE     YT +++  LD IHS G +H D++ DN LL               K   
Sbjct: 161 SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220

Query: 49  EAEISAF-------------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRG 93
           E  +                L+  G    Y    D W++G    EM+  +   +      
Sbjct: 221 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD---- 276

Query: 94  LASRDDLLELIAFSSEVPEFPSN--ISEDGRDFLSK 127
             S       I        FP +  IS++ ++ +  
Sbjct: 277 --SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA 310

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 31/176 (17%), Positives = 54/176 (30%), Gaps = 63/176 (35%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------------------- 50
           Y  +I  GL  + S G+++ D++ DN +L    + H                        
Sbjct: 126 YAAEIAIGLFFLQSKGIIYRDLKLDNVML--DSEGHIKIADFGMCKENIWDGVTTKTFCG 183

Query: 51  -------EISAFLQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLA-----S 96
                  EI   +        Y   VD WA G +  EM+            G A      
Sbjct: 184 TPDYIAPEI---IAYQP----YGKSVDWWAFGVLLYEMLA-----------GQAPFEGED 225

Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
            D+L + I   +    +P ++S++          +    R        + +  H F
Sbjct: 226 EDELFQSIMEHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 279

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 41/204 (20%), Positives = 62/204 (30%), Gaps = 70/204 (34%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI------SA 54
           + + LP   +  Y   + R L +IHS G+ H DI+  N LL    D   A +      SA
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL----DPDTAVLKLCDFGSA 204

Query: 55  FLQRHG----------------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGR- 92
                G                L+     Y   +D W+ G V  E++          G+ 
Sbjct: 205 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL---------GQP 255

Query: 93  ---GLASRDDLLELIAF-----SSEVPE---------------------FPSNISEDGRD 123
              G +  D L+E+I         ++ E                     F      +   
Sbjct: 256 IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA 315

Query: 124 FLSKCFIRVHQLRWTAKHVLAHPF 147
             S+        R T     AH F
Sbjct: 316 LCSRLLEYTPTARLTPLEACAHSF 339

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 26/181 (14%), Positives = 50/181 (27%), Gaps = 63/181 (34%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH 66
           E +  R  KD+L  + + H   + H D++ +N L +        ++  F    GL   + 
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDF----GLAARFK 160

Query: 67  ---------------------------VDTWALGRV----------FVEMMTAEISAWGS 89
                                       D W+ G +          F             
Sbjct: 161 PGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPF----------SAP 210

Query: 90  FGRGLASRDDLLELIAFSSEVPEFPS----NISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
                 +  +++  I        FP     N+S      + +   +  + R T+   L H
Sbjct: 211 ------TDSEVMLKI--REGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262

Query: 146 P 146
            
Sbjct: 263 E 263

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 42/201 (20%), Positives = 65/201 (32%), Gaps = 68/201 (33%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR--- 58
            GL       +   +L G+ + H   ++H D++  N LL+  +   E +I+ F L R   
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN-LLINREG--ELKIADFGLARAFG 151

Query: 59  -------HG----------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                  H           +L+    Y   +D W++G +F EM+          G  L  
Sbjct: 152 IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN---------GTPLFP 202

Query: 95  -ASRDDLLELI-------------------AFSSEVPEFP--------SNISEDGRDFLS 126
             S  D L  I                    +      +           + E G D LS
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLS 262

Query: 127 KCFIRVHQLRWTAKHVLAHPF 147
           K        R TAK  L H +
Sbjct: 263 KMLKLDPNQRITAKQALEHAY 283

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 53/169 (31%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH---------------EAEISAF-- 55
           Y  +I+ GL  +HS G+V+ D++ DN LL   KD H               +A+ + F  
Sbjct: 123 YAAEIILGLQFLHSKGIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNTFCG 180

Query: 56  ---------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLA-----SRDD 99
                    L        Y   VD W+ G +  EM+            G +       ++
Sbjct: 181 TPDYIAPEILLGQK----YNHSVDWWSFGVLLYEMLI-----------GQSPFHGQDEEE 225

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH-VLAHPF 147
           L   I   +  P +P  + ++ +D L K F+R  + R   +  +  HP 
Sbjct: 226 LFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 272

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 30/176 (17%), Positives = 57/176 (32%), Gaps = 54/176 (30%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-EAEISAF-------- 55
             E     + +++   L + H   ++H DI+ +N L+        E +I+ F        
Sbjct: 111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM----GYKGELKIADFGWSVHAPS 166

Query: 56  -----------------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLA- 95
                            ++       +   VD W  G +  E +            G+  
Sbjct: 167 LRRRTMCGTLDYLPPEMIEGKT----HDEKVDLWCAGVLCYEFLV-----------GMPP 211

Query: 96  ----SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               S  +    I   +   +FP  +S+  +D +SK        R   K V+ HP+
Sbjct: 212 FDSPSHTETHRRI--VNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 39/177 (22%), Positives = 59/177 (33%), Gaps = 65/177 (36%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------------------- 50
           Y  +I   L H+H  G+++ D++ +N +L      H                        
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIML--NHQGHVKLTDFGLCKESIHDGTVTHTFCG 183

Query: 51  -------EISAFLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLA----- 95
                  EI   L R G     H   VD W+LG +  +M+T           G       
Sbjct: 184 TIEYMAPEI---LMRSG-----HNRAVDWWSLGALMYDMLT-----------GAPPFTGE 224

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
           +R   ++ I         P  ++++ RD L K   R    R       A  V AHPF
Sbjct: 225 NRKKTIDKILKCK--LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 66/184 (35%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLI 64
           L E  +    K ++  L + HS  +VH D++ +N L          +I  F    GL  +
Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDF----GLAEL 176

Query: 65  YH---------------------------VDTWALGRV----------FVEMMTAEISAW 87
           +                             D W+ G V          F           
Sbjct: 177 FKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPF----------T 226

Query: 88  GSFGRGLASRDDLLELI-----AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHV 142
           G+      S +++ +        ++ E       ++    D L +   +  + R +A  V
Sbjct: 227 GT------SLEEVQQKATYKEPNYAVE----CRPLTPQAVDLLKQMLTKDPERRPSAAQV 276

Query: 143 LAHP 146
           L H 
Sbjct: 277 LHHE 280

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 43/163 (26%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF------LQRHG 60
           E E     K I   + ++HS  + H D++ +N L  + +     +++ F           
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK- 174

Query: 61  LLLIYH--VDTWALGRV-----------FVEMMTAEISAWGSFGRGLASRDDLLELIAFS 107
               Y    D W+LG V           F          + +   GLA    +   I   
Sbjct: 175 ----YDKSCDMWSLG-VIMYILLCGYPPF----------YSN--HGLAISPGMKTRIR-- 215

Query: 108 SEVPEFPS----NISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
               EFP+     +SE+ +  +          R T    + HP
Sbjct: 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 38/171 (22%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH-EAEI-----SAFL 56
           K L E E   Y + I+ G  ++H + ++H D++  N  L    +   E +I     +  +
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIGDFGLATKV 165

Query: 57  QRHGLLLI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
           +  G                        + VD W++G +   ++       G      + 
Sbjct: 166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV------GKPPFETSC 219

Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +    I         P +I+      + K        R T   +L   F
Sbjct: 220 LKETYLRI--KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 36/181 (19%), Positives = 59/181 (32%), Gaps = 61/181 (33%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E +     + IL  + H H  G+VH +++ +N LL+A K    A +       +  ++  
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPEN-LLLASKLKG-AAVKLADFGLAIEVEGE 166

Query: 60  GLLL------------------IYH--VDTWALGRV-----------FVEMMTAEISAWG 88
                                  Y   VD WA G V           F          W 
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG-VILYILLVGYPPF----------WD 215

Query: 89  SFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
                   +  L + I   A+    PE+   ++ + +D ++K        R TA   L H
Sbjct: 216 E------DQHRLYQQIKAGAYDFPSPEWD-TVTPEAKDLINKMLTINPSKRITAAEALKH 268

Query: 146 P 146
           P
Sbjct: 269 P 269

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 43.6 bits (103), Expect = 6e-06
 Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 39/176 (22%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEI 52
           LPE     Y  +++  +D +H    VH DI+ DN L+               K   +  +
Sbjct: 172 LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 231

Query: 53  SAF-------------LQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
            +              LQ        +    D W+LG    EM+  E   +        S
Sbjct: 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------S 285

Query: 97  RDDLLELIAFSSE---VPEFPSNISEDGRDFLSKCFIR-VHQL-RWTAKHVLAHPF 147
             +    I    E    P   +++SE+ +D + +      H+L +   +    HPF
Sbjct: 286 LVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 38/179 (21%), Positives = 57/179 (31%), Gaps = 43/179 (24%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEI 52
           +P      Y  +I+  +D +H  G VH DI+ DN LL               K   +  +
Sbjct: 159 IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218

Query: 53  SAF-------------LQRHGLLLIYH-----VDTWALGRVFVEMMTAEISAWGSFGRGL 94
            +              LQ  G            D WALG    EM   +   +       
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD----- 273

Query: 95  ASRDDLLELIAFSSE---VPEFPSNISEDGRDFLSKCFIRVHQLRWT---AKHVLAHPF 147
            S  +    I    E   +P     + E+ RDF+ +  +   + R     A     HPF
Sbjct: 274 -STAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQR-LLCPPETRLGRGGAGDFRTHPF 330

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.4 bits (103), Expect = 7e-06
 Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 56/174 (32%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGKDAHEAEISAF-- 55
           YT +I+  L+++H  G++H D++ +N LL               V   ++ +A  ++F  
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 194

Query: 56  ---------LQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-----ASRDD 99
                    L             D WALG +  +++            GL      +   
Sbjct: 195 TAQYVSPELLTEKS----ACKSSDLWALGCIIYQLVA-----------GLPPFRAGNEYL 239

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT------AKHVLAHPF 147
           + + I       +FP       RD + K  +     R           + AHPF
Sbjct: 240 IFQKII--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 32/175 (18%), Positives = 52/175 (29%), Gaps = 62/175 (35%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------------------- 50
           Y  +I   L ++HS  +V+ D++ +N LL      H                        
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILL--DSQGHIVLTDFGLCKENIEHNSTTSTFCG 201

Query: 51  -------EISAFLQRHGLLLIY--HVDTWALGRVFVEMMTAEISAWGSFGRGLA-----S 96
                  E+   L +      Y   VD W LG V  EM+            GL      +
Sbjct: 202 TPEYLAPEV---LHKQP----YDRTVDWWCLGAVLYEMLY-----------GLPPFYSRN 243

Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR----WTAKHVLAHPF 147
             ++ + I       +   NI+   R  L     +    R         + +H F
Sbjct: 244 TAEMYDNILNKP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 45/200 (22%), Positives = 67/200 (33%), Gaps = 66/200 (33%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR- 58
              GLP   I    +  LRGLD +H++ +VH D++ +N +LV        +++ F L R 
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN-ILVTSGG--TVKLADFGLARI 169

Query: 59  --------HG----------LLL--IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                               +LL   Y   VD W++G +F EM            + L  
Sbjct: 170 YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR---------RKPLFC 220

Query: 95  -ASRDDLLELIAFS-------------SEVP--EFP-----------SNISEDGRDFLSK 127
             S  D L  I F                +P   FP             + E G   L +
Sbjct: 221 GNSEADQLGKI-FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLE 279

Query: 128 CFIRVHQLRWTAKHVLAHPF 147
                   R +A   L H +
Sbjct: 280 MLTFNPHKRISAFRALQHSY 299

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           +          D  + L+  H +G++H D++  N ++
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI 149

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 64/183 (34%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF----------- 55
           E +     + IL  + + HS+G+VH +++ +N LL +       +++ F           
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186

Query: 56  ---------------LQRHGLLLIYH--VDTWALGRV-----------FVEMMTAEISAW 87
                          L++      Y   VD WA G V           F          W
Sbjct: 187 WHGFAGTPGYLSPEVLKKDP----YSKPVDIWACG-VILYILLVGYPPF----------W 231

Query: 88  GSFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
                    +  L   I   A+    PE+   ++ + +  +        + R TA   L 
Sbjct: 232 DE------DQHRLYAQIKAGAYDYPSPEWD-TVTPEAKSLIDSMLTVNPKKRITADQALK 284

Query: 145 HPF 147
            P+
Sbjct: 285 VPW 287

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           L       +T  IL G+ H H   +VH DI+  N L+
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI 144

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 73/206 (35%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR--- 58
           +GL  + +  +   +L+GL   H + ++H D++  N LL+  +   + ++  F L R   
Sbjct: 103 RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQN-LLINKRG--QLKLGDFGLARAFG 159

Query: 59  -------HG----------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                              +L+    Y   +D W+ G +  EM+T         G+ L  
Sbjct: 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT---------GKPLFP 210

Query: 95  -ASRDDLLELI-------------------AFSSEVPEFPSN-------------ISEDG 121
             + ++ L+LI                    ++  + + P               +  + 
Sbjct: 211 GTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNL 270

Query: 122 RDFLSKCFIRVHQLRWTAKHVLAHPF 147
            DFL         +R +AK  L HP+
Sbjct: 271 MDFLHGLLQLNPDMRLSAKQALHHPW 296

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 59/179 (32%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E +     + +L  + ++H +G+VH D++ +N LL    +   ++I       S   Q  
Sbjct: 105 EKDASLVIQQVLSAVKYLHENGIVHRDLKPEN-LLYLTPEE-NSKIMITDFGLSKMEQNG 162

Query: 60  GL-------------LLIYH-----VDTWALGRV----------FVEMMTAEISAWGSFG 91
            +             +L        VD W++G +          F          +    
Sbjct: 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF----------YEE-- 210

Query: 92  RGLASRDDLLELIAFSSEVPEFPS----NISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
               +   L E I       EF S    +ISE  +DF+     +    R+T +  L+HP
Sbjct: 211 ----TESKLFEKI--KEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 35/181 (19%), Positives = 54/181 (29%), Gaps = 58/181 (32%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E E     K I   + ++HS  + H D++ +N LL   K    A +       +     H
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPEN-LLYTSKR-PNAILKLTDFGFAKETTSH 217

Query: 60  GLLLI-----------------YH--VDTWALGRV-----------FVEMMTAEISAWGS 89
             L                   Y    D W+LG V           F          + +
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG-VIMYILLCGYPPF----------YSN 266

Query: 90  FGRGLASRDDLLELIAFSSEVPEFPS----NISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
              GLA    +   I       EFP+     +SE+ +  +          R T    + H
Sbjct: 267 --HGLAISPGMKTRI--RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322

Query: 146 P 146
           P
Sbjct: 323 P 323

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 42/202 (20%), Positives = 70/202 (34%), Gaps = 69/202 (34%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR--- 58
             L    +  +   +L+GL   HS  ++H D++  N LL+      E +++ F L R   
Sbjct: 96  GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN-LLINRNG--ELKLANFGLARAFG 152

Query: 59  -------HG----------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                              +L    +Y   +D W+ G +F E+  A        GR L  
Sbjct: 153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA--------GRPLFP 204

Query: 95  -ASRDDLLELIAFS-------------SEVP---EFP------------SNISEDGRDFL 125
               DD L+ I F              +++P    +P              ++  GRD L
Sbjct: 205 GNDVDDQLKRI-FRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263

Query: 126 SKCFIRVHQLRWTAKHVLAHPF 147
                     R +A+  L HP+
Sbjct: 264 QNLLKCNPVQRISAEEALQHPY 285

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 9/40 (22%), Positives = 17/40 (42%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
           +  P   +      +   L  +H + L H D++ +N L V
Sbjct: 118 QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 157

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 48/176 (27%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAF 55
           K   E+E   +   I+ G+ ++HSHG++H D+   N LL      +   I       +  
Sbjct: 107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL----TRNM-NIKIADFGLATQ 161

Query: 56  LQRHGLLLI--------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGL- 94
           L+                              D W+LG +F  ++          GR   
Sbjct: 162 LKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI---------GR-PP 211

Query: 95  ---ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
               +  + L  +   ++  E PS +S + +D + +   R    R +   VL HPF
Sbjct: 212 FDTDTVKNTLNKV-VLADY-EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 23/105 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSH--GLVHCDIQGDNTLLVAGKDA-----------HE 49
           +G+  +   ++ + +   L  + +    ++HCD++ +N LL   K +             
Sbjct: 152 RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211

Query: 50  AE-ISAFLQ-RH--------GLLLIYHVDTWALGRVFVEMMTAEI 84
            + I  ++Q R         G+     +D W+LG + VEM T E 
Sbjct: 212 GQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP 256

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD 46
           GL E  I     DI   L ++H + ++H D++ +N +L  G  
Sbjct: 117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ 159

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
            G    +I  Y  +IL+ L+++    L H D++ +N LL 
Sbjct: 132 NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLD 171

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 48/203 (23%), Positives = 75/203 (36%), Gaps = 71/203 (34%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR--- 58
            GL + +I  Y   +LRG+ H H H ++H D++  N LL+        +++ F L R   
Sbjct: 114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN-LLINSDG--ALKLADFGLARAFG 170

Query: 59  -------HG----------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                  H           +L+    Y   VD W++G +F EM+T         G+ L  
Sbjct: 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT---------GKPLFP 221

Query: 95  -ASRDDLLELIAFS-------------SEVPE-----FP-----------SNISEDGRDF 124
             + DD L  I FS              E+P      F                ++G D 
Sbjct: 222 GVTDDDQLPKI-FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDL 280

Query: 125 LSKCFIRVHQLRWTAKHVLAHPF 147
           LS         R +A+  + HP+
Sbjct: 281 LSNMLCFDPNKRISARDAMNHPY 303

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV 42
                  I +    I + ++ +HS+ L H D++ +N L V
Sbjct: 113 LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFV 152

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 55/179 (30%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E E     +DI   +  +HSH + H D++ +N LL   K+  +A +       +    ++
Sbjct: 127 EREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN-LLYTSKE-KDAVLKLTDFGFAKETTQN 184

Query: 60  GLLLI----------------YH--VDTWALGRV----------FVEMMTAEISAWGSFG 91
            L                   Y    D W+LG +          F          + + G
Sbjct: 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF----------YSNTG 234

Query: 92  RGLASRDDLLELIAFSSEVPEFPS----NISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           + ++    +   I        FP+     +SED +  +          R T    + HP
Sbjct: 235 QAIS--PGMKRRIR--LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 40/191 (20%), Positives = 60/191 (31%), Gaps = 54/191 (28%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV--------------------AGKD 46
           E E     +D+   LD +H+ G+ H D++ +N L                         D
Sbjct: 110 ELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169

Query: 47  AHEAEISAFLQR---------------HGLLLIYH--VDTWALGRVFVEMM--------- 80
                    L                      IY    D W+LG V + ++         
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG-VILYILLSGYPPFVG 228

Query: 81  -TAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPS----NISEDGRDFLSKCFIRVHQL 135
                  W       A ++ L E I       EFP     +IS   +D +SK  +R  + 
Sbjct: 229 RCGSDCGWDRGEACPACQNMLFESI--QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQ 286

Query: 136 RWTAKHVLAHP 146
           R +A  VL HP
Sbjct: 287 RLSAAQVLQHP 297

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 49/200 (24%), Positives = 73/200 (36%), Gaps = 66/200 (33%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR- 58
              G+P   I      +LRGLD +HSH +VH D++  N +LV      + +++ F L R 
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN-ILVTSSG--QIKLADFGLARI 169

Query: 59  --------HG----------LLL--IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                               +LL   Y   VD W++G +F EM            + L  
Sbjct: 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR---------RKPLFR 220

Query: 95  -ASRDDLLELIAFS-------------SEVP--EFP-----------SNISEDGRDFLSK 127
            +S  D L  I                  +P   F            ++I E G+D L K
Sbjct: 221 GSSDVDQLGKI-LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLK 279

Query: 128 CFIRVHQLRWTAKHVLAHPF 147
           C       R +A   L+HP+
Sbjct: 280 CLTFNPAKRISAYSALSHPY 299

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 37/181 (20%), Positives = 62/181 (34%), Gaps = 63/181 (34%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYH 66
           EH+  R  K +  G+ ++H H +VH D++ +N LL + +   + +I  F    GL   + 
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF----GLSTCFQ 175

Query: 67  ---------------------------VDTWALGRV----------FVEMMTAEISAWGS 89
                                       D W+ G +          F          +G 
Sbjct: 176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF----------YGK 225

Query: 90  FGRGLASRDDLLELIAFSSEVPEFPS----NISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
                 +  D+L+ +   +    F       IS+D +D + K       LR TA   L H
Sbjct: 226 ------NEYDILKRV--ETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277

Query: 146 P 146
           P
Sbjct: 278 P 278

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 33/186 (17%), Positives = 59/186 (31%), Gaps = 59/186 (31%)

Query: 2   AKG-LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------S 53
           A+    E +     + IL  + + HS+G+VH +++ +N LL+A K    A +       +
Sbjct: 98  AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN-LLLASKA-KGAAVKLADFGLA 155

Query: 54  AFLQRHGLL--------------LIYH-----VDTWALGRV----------FVEMMTAEI 84
             +                    L        VD WA G +          F        
Sbjct: 156 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF-------- 207

Query: 85  SAWGSFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH 141
             W         +  L   I   A+    PE+   ++ + +  +        + R TA  
Sbjct: 208 --WDE------DQHRLYAQIKAGAYDYPSPEWD-TVTPEAKSLIDSMLTVNPKKRITADQ 258

Query: 142 VLAHPF 147
            L  P+
Sbjct: 259 ALKVPW 264

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 40/202 (19%), Positives = 65/202 (32%), Gaps = 67/202 (33%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRH 59
           ++  L    I  Y    L+GL+++H H ++H D++ +N LL+        +++ F L + 
Sbjct: 105 NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNN-LLLDENG--VLKLADFGLAKS 161

Query: 60  -G-------------------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL 94
            G                   LL    +Y   VD WA+G +  E++              
Sbjct: 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL---------RVPF 212

Query: 95  ---ASRDDLLELI-------------AFSS-----EVPEFP--------SNISEDGRDFL 125
               S  D L  I                S         FP        S   +D  D +
Sbjct: 213 LPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLI 272

Query: 126 SKCFIRVHQLRWTAKHVLAHPF 147
              F+     R TA   L   +
Sbjct: 273 QGLFLFNPCARITATQALKMKY 294

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 40.6 bits (96), Expect = 7e-05
 Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 62/174 (35%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------------------- 50
           Y  ++   L+++HS  +++ D++ +N LL   K+ H                        
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILL--DKNGHIKITDFGFAKYVPDVTYTLCGTPD 168

Query: 51  ----EISAFLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLA-----SRD 98
               E+   +         +   +D W+ G +  EM+            G       +  
Sbjct: 169 YIAPEV---VSTKP-----YNKSIDWWSFGILIYEMLA-----------GYTPFYDSNTM 209

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
              E I   +    FP   +ED +D LS+   R    R        + V  HP+
Sbjct: 210 KTYEKIL--NAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 37/218 (16%), Positives = 64/218 (29%), Gaps = 81/218 (37%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAF-LQR--- 58
           LP   +      IL G+ ++H++ ++H D++  N +LV G+        I+     R   
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPAN-ILVMGEGPERGRVKIADMGFARLFN 183

Query: 59  -------HG-------------LLL---IYH--VDTWALGRVFVEMMT--------AEIS 85
                                 LLL    Y   +D WA+G +F E++T         E  
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI 243

Query: 86  AWGSFGRGLASRDDLLELI-------------------AFSSEVPEFPSN---------- 116
              +         D L+ I                     S+ + +F  N          
Sbjct: 244 KTSN-----PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKY 298

Query: 117 -------ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                          L K        R T++  +  P+
Sbjct: 299 MEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 336

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 43/203 (21%), Positives = 73/203 (35%), Gaps = 71/203 (34%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQR--- 58
             +  H +  +   +LRGL + H   ++H D++  N LL+  +   E +++ F L R   
Sbjct: 95  NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQN-LLINERG--ELKLADFGLARAKS 151

Query: 59  -------HG----------LLL---IY--HVDTWALGRVFVEMMTAEISAWGSFGRGL-- 94
                  +           +LL    Y   +D W +G +F EM T         GR L  
Sbjct: 152 IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT---------GRPLFP 202

Query: 95  -ASRDDLLELIAFS-------------SEVPE-----FP-----------SNISEDGRDF 124
            ++ ++ L  I F                  E     +P             +  DG D 
Sbjct: 203 GSTVEEQLHFI-FRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADL 261

Query: 125 LSKCFIRVHQLRWTAKHVLAHPF 147
           L+K      + R +A+  + HPF
Sbjct: 262 LTKLLQFEGRNRISAEDAMKHPF 284

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           L         + I   LD  H+ G  H D++ +N L+
Sbjct: 131 LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV 167

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 57/179 (31%)

Query: 7   EHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQRH 59
           E +     K IL  + ++H +G+VH D++ +N LL A     +A +       S  ++  
Sbjct: 147 ERDAADAVKQILEAVAYLHENGIVHRDLKPEN-LLYATPAP-DAPLKIADFGLSKIVEHQ 204

Query: 60  GLL--------------LIYH-----VDTWALGRV----------FVEMMTAEISAWGSF 90
            L+              L        VD W++G +          F              
Sbjct: 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF-------------- 250

Query: 91  GRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
                    +   I    +    P +   +S + +D + K  +   + R T    L HP
Sbjct: 251 -YDERGDQFMFRRILNCEYYFISPWWD-EVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 46/169 (27%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
           L E     +   +L  + H H+ G++H DI+ +N L+    D +  E+        A L+
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 201

Query: 58  RHGLL-------------LI----YH---VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
              +               I    YH      W+LG +  +M+  +I     F       
Sbjct: 202 D-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI----PF------- 249

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           +   E+I        F   +S + +  +  C       R T + +  HP
Sbjct: 250 EHDEEII---RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 295

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 43/178 (24%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQR 58
           + K L E +   Y +D+++G++++H   ++H DI+  N L+        A+  +S   + 
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189

Query: 59  HGLLL--------------------IYH---VDTWALGRVFVEMMTAEISAWGSFGRGLA 95
              LL                    I+    +D WA+G      +         FG+   
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV---------FGQ-CP 239

Query: 96  SRDD----LLELIAFSSEVPEFPS--NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             D+    L   I   S+  EFP   +I+ED +D +++   +  + R     +  HP+
Sbjct: 240 FMDERIMCLHSKI--KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 44/170 (25%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVA--------------GKDAHEAEISAF--- 55
           Y  +I+  L+H+H  G+++ DI+ +N LL +                         F   
Sbjct: 164 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223

Query: 56  ----------LQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
                         G     H   VD W+LG +  E++T   S +   G    S+ ++  
Sbjct: 224 IEYMAPDIVRGGDSG-----HDKAVDWWSLGVLMYELLTGA-SPFTVDGEK-NSQAEISR 276

Query: 103 LIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR-----WTAKHVLAHPF 147
            I  S   P +P  +S   +D + +  ++  + R       A  +  H F
Sbjct: 277 RILKSE--PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 32/169 (18%), Positives = 56/169 (33%), Gaps = 46/169 (27%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------SAFLQ 57
           L E     +   ++  + H HS G+VH DI+ +N L+    D              A L 
Sbjct: 136 LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI----DLRRGCAKLIDFGSGALLH 191

Query: 58  RHGLLL-----------------IYH---VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                                   YH      W+LG +  +M+  +I     F       
Sbjct: 192 D-EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI----PF------- 239

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP 146
           +   E++        FP+++S D    + +C       R + + +L  P
Sbjct: 240 ERDQEIL---EAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
           K  P  +   Y   ++ GL+++HS G+VH DI+  N LL
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL 142

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 32/174 (18%), Positives = 53/174 (30%), Gaps = 62/174 (35%)

Query: 13  YTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------------------- 50
           Y   I+   +++HS  L++ D++ +N L+   +  +                        
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWTLCGTPE 203

Query: 51  ----EISAFLQRHGLLLIYH---VDTWALGRVFVEMMTAEISAWGSFGRGL-----ASRD 98
               EI   +   G     +   VD WALG +  EM             G          
Sbjct: 204 ALAPEI---ILSKG-----YNKAVDWWALGVLIYEMAA-----------GYPPFFADQPI 244

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
            + E I   S    FPS+ S D +D L          R+         +  H +
Sbjct: 245 QIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 38.3 bits (89), Expect = 4e-04
 Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLL 41
           +GLP   + +  + +L+GLD++H+   ++H DI+ +N LL
Sbjct: 141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL 41
               EI R  + +L GL +IH + ++H D++  N L+
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 37.8 bits (88), Expect = 5e-04
 Identities = 43/202 (21%), Positives = 66/202 (32%), Gaps = 66/202 (32%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-LQRH 59
           S + +P + I  Y   + R +  IHS G+ H DI+  N LLV  KD +  ++  F   + 
Sbjct: 134 SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQN-LLVNSKD-NTLKLCDFGSAKK 191

Query: 60  G-------------------LLLIYH-----VDTWALGRVFVEMMTAEISAWGSFGR--- 92
                               L+L        +D W++G VF E++          G+   
Sbjct: 192 LIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL---------GKPLF 242

Query: 93  -GLASRDDLLELI------------AFSSEVPE--------------FPSNISEDGRDFL 125
            G  S D L+ +I              +    E               P        D L
Sbjct: 243 SGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLL 302

Query: 126 SKCFIRVHQLRWTAKHVLAHPF 147
            +       LR      +AHPF
Sbjct: 303 EQILRYEPDLRINPYEAMAHPF 324

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.98
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.98
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.98
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.98
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.98
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.98
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.98
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.98
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.98
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.98
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.98
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.98
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.98
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.98
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.98
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.98
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.98
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.98
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.98
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.96
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.95
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.95
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.94
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.94
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.93
3uqc_A	286	Probable conserved transmembrane protein; structur	99.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.93
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.9
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.64
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.09
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.05
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.96
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.63
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.82
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.19
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.02
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.01
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.92
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.21
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	94.49
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	92.75
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	92.01
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	87.27
3ats_A	357	Putative uncharacterized protein; hypothetical pro	84.83
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	84.46
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	81.38
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	80.89

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-40  Score=231.34  Aligned_cols=141  Identities=18%  Similarity=0.315  Sum_probs=117.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeec-CCCchhHHHHHHHHhh--------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH--------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~~--------------------   59 (152)
                      +++++..++.++.||+.||+|||+++  |+||||||+|||++. +   +.++++|||...                    
T Consensus       124 ~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~---g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE  200 (290)
T 3fpq_A          124 KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---GSVKIGDLGLATLKRASFAKAVIGTPEFMAPE  200 (290)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTT---SCEEECCTTGGGGCCTTSBEESCSSCCCCCGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCC---CCEEEEeCcCCEeCCCCccCCcccCccccCHH
Confidence            57899999999999999999999998  999999999999974 4   568899998321                    


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                        ...++.++||||+||++|||++|+.||.+..     ....+...+.....++..+...++++.+|+.+||..||++||
T Consensus       201 ~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  275 (290)
T 3fpq_A          201 MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY  275 (290)
T ss_dssp             GGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----cHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCc
Confidence              1235788999999999999999998876543     555666666555555556677889999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      |+.++++||||+++
T Consensus       276 s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          276 SIKDLLNHAFFQEE  289 (290)
T ss_dssp             CHHHHHTSGGGC--
T ss_pred             CHHHHhcCccccCC
Confidence            99999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.7e-40  Score=228.45  Aligned_cols=139  Identities=22%  Similarity=0.314  Sum_probs=117.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------H
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------Q   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~   57 (152)
                      ++++++.+++.+++||+.||+|||++||+||||||+|||++.+   +.++++|||                        .
T Consensus       106 ~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~---~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~  182 (275)
T 3hyh_A          106 RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH---LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV  182 (275)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTT---CCEEECCSSCC---------------CTTSCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCC---CCEEEeecCCCeecCCCCccCCeeECcccCChhh
Confidence            4679999999999999999999999999999999999999887   567777776                        1


Q ss_pred             hhcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+..+ +.++||||+||++|+|++|+.||.+.      +...+...+....  ..+|..+++++.+++.+||..||++|
T Consensus       183 ~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~R  254 (275)
T 3hyh_A          183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE------SIPVLFKNISNGV--YTLPKFLSPGAAGLIKRMLIVNPLNR  254 (275)
T ss_dssp             HSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTC--CCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             hcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCChhHC
Confidence            223333 46899999999999999999888664      5566666665433  45678899999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      ||+.|+++||||+.+
T Consensus       255 ~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          255 ISIHEIMQDDWFKVD  269 (275)
T ss_dssp             CCHHHHHHCHHHHTT
T ss_pred             cCHHHHHcCcccccC
Confidence            999999999999753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.8e-40  Score=234.50  Aligned_cols=140  Identities=25%  Similarity=0.365  Sum_probs=117.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||.                         
T Consensus       165 ~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEv  241 (346)
T 4fih_A          165 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEL  241 (346)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCC---CCEEEecCcCceecCCCCCcccccccCcCcCCHHH
Confidence            569999999999999999999999999999999999999887   6788889882                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+..++.++||||+||++|||++|+.||.+.      +..+....+.... .....+..+++++.+||.+||..||++|
T Consensus       242 l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R  315 (346)
T 4fih_A          242 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR  315 (346)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             HCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHC
Confidence            23444678999999999999999999888765      5555555554332 2233445789999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      ||+.|+++||||++.
T Consensus       316 ~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          316 ATAAELLKHPFLAKA  330 (346)
T ss_dssp             CCHHHHTTCGGGGGC
T ss_pred             cCHHHHhcCHhhcCC
Confidence            999999999999753

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3e-39  Score=227.14  Aligned_cols=138  Identities=22%  Similarity=0.346  Sum_probs=118.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------H
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------Q   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------~   57 (152)
                      +++++.+++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||                         .
T Consensus       121 ~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~  197 (304)
T 3ubd_A          121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE---GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV  197 (304)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT---SCEEEESSEEEEC-----CCCCSCCCCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCC---CCEEecccccceeccCCCccccccccCcccCCHHH
Confidence            579999999999999999999999999999999999999887   567788887                         2


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+||++|+|++|+.||.+.      +..++...+....  +.+|..+++++.+||.+||..||++||
T Consensus       198 ~~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~R~  269 (304)
T 3ubd_A          198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK------DRKETMTMILKAK--LGMPQFLSPEAQSLLRMLFKRNPANRL  269 (304)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             hccCCCCCCCcccchHHHHHHHHhCCCCCCCc------CHHHHHHHHHcCC--CCCCCcCCHHHHHHHHHHcccCHHHCC
Confidence            33445678999999999999999999888765      5666666665433  456788999999999999999999999


Q ss_pred             C-----HHHHhcCCCCCCC
Q 039869          138 T-----AKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~~  151 (152)
                      +     ++++++||||++-
T Consensus       270 ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          270 GAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             TCSTTTHHHHHTSGGGTTC
T ss_pred             CCCcCCHHHHHcCccccCC
Confidence            8     5799999999863

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.4e-39  Score=232.37  Aligned_cols=138  Identities=25%  Similarity=0.289  Sum_probs=118.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------H
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------Q   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------~   57 (152)
                      ..+++.+++.|+.||+.||+|||++||+||||||+|||++.+   +.++|+|||                         .
T Consensus       120 ~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~  196 (350)
T 4b9d_A          120 VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD---GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI  196 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTT---CCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCC---CCEEEcccccceeecCCcccccccCCCccccCHHH
Confidence            457899999999999999999999999999999999999887   567888887                         2


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++||||+||++|||++|+.||.+.      +..++...+.... .+..+..++.++.+||.+||..||++||
T Consensus       197 l~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~~~i~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~  269 (350)
T 4b9d_A          197 CENKPYNNKSDIWALGCVLYELCTLKHAFEAG------SMKNLVLKIISGS-FPPVSLHYSYDLRSLVSQLFKRNPRDRP  269 (350)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHccCChhHCc
Confidence            33455688999999999999999999888765      5566666665444 3456778999999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||++
T Consensus       270 s~~e~l~hp~~~~  282 (350)
T 4b9d_A          270 SVNSILEKGFIAK  282 (350)
T ss_dssp             CHHHHHTSHHHHT
T ss_pred             CHHHHhcCHHhhc
Confidence            9999999999964

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.7e-39  Score=228.67  Aligned_cols=138  Identities=22%  Similarity=0.330  Sum_probs=118.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ++|++.+++.|+.||+.||+|||++||+||||||+|||++.+   +.++++|||..                        
T Consensus       127 ~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAP  203 (311)
T 4aw0_A          127 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED---MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP  203 (311)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCC---CCEEEEEcCCceecCCCCCcccccCcccCcccCCH
Confidence            579999999999999999999999999999999999999887   67788888732                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         .+..++.++|+||+||++|+|++|+.||.+.      +..++...+....  ..+|..+++++.+||.+||..||++
T Consensus       204 Evl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~dli~~lL~~dp~~  275 (311)
T 4aw0_A          204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG------NEGLIFAKIIKLE--YDFPEKFFPKARDLVEKLLVLDATK  275 (311)
T ss_dssp             HHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTC--CCCCTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHcCC--CCCCcccCHHHHHHHHHHccCCHhH
Confidence               2333577899999999999999999888765      5666666665443  4567889999999999999999999


Q ss_pred             CcCHHH------HhcCCCCCCC
Q 039869          136 RWTAKH------VLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~------~l~h~~~~~~  151 (152)
                      |||+.|      +++||||++-
T Consensus       276 R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          276 RLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             STTSGGGTCHHHHHTSGGGTTC
T ss_pred             CcChHHHcCCHHHHCCCCcCCC
Confidence            999987      5899999863

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.4e-39  Score=234.12  Aligned_cols=140  Identities=25%  Similarity=0.365  Sum_probs=118.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.|++||+.||+|||++||+||||||+|||++.+   +.++|+|||.                         
T Consensus       242 ~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEv  318 (423)
T 4fie_A          242 TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEL  318 (423)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTT---CCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC---CCEEEecCccceECCCCCccccccccCcCcCCHHH
Confidence            468999999999999999999999999999999999999887   6788999982                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+..|+.++|||||||++|||++|..||.+.      +..+....+.... .....+..+++++.+||.+||..||++|
T Consensus       319 l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~------~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R  392 (423)
T 4fie_A          319 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR  392 (423)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTS
T ss_pred             HCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHC
Confidence            23444678999999999999999999888765      5555555554332 2234456799999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      ||+.|+|+||||++.
T Consensus       393 ~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          393 ATAAELLKHPFLAKA  407 (423)
T ss_dssp             CCHHHHTTCGGGGGC
T ss_pred             cCHHHHhcCHHhcCC
Confidence            999999999999753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=6.6e-38  Score=222.82  Aligned_cols=141  Identities=23%  Similarity=0.288  Sum_probs=113.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ++|++.+++.|+.||+.||+|||++||+||||||+|||++.++  ..++++|||.                         
T Consensus       145 ~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y  222 (336)
T 4g3f_A          145 GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH  222 (336)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS--CCEEECCCTTCEEC------------CCCCCCGGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC--CEEEEeeCCCCeEccCCCcccceecCCccccCccc
Confidence            5799999999999999999999999999999999999998763  1467777762                         


Q ss_pred             -----hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-CCCCCCCCChhHHHHHHHhhcc
Q 039869           58 -----RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-VPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        58 -----~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                           ..+..++.++||||+||++|||++|+.||.+..      ...+...+..... ...++..+++++.++|.+||..
T Consensus       223 mAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~  296 (336)
T 4g3f_A          223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF------RGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRK  296 (336)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC------CSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCS
T ss_pred             cCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccC
Confidence                 223345788999999999999999998886653      2223333333222 2356788999999999999999


Q ss_pred             ccCCCcCHHHH-------------hcCCCCCCC
Q 039869          132 VHQLRWTAKHV-------------LAHPFPSVD  151 (152)
Q Consensus       132 ~p~~R~~~~~~-------------l~h~~~~~~  151 (152)
                      ||++|||+.|+             ++|||+.+.
T Consensus       297 dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          297 EPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             CHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            99999999997             589999764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=226.27  Aligned_cols=140  Identities=23%  Similarity=0.326  Sum_probs=110.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +++|++.+++.+++||+.||+|||++||+||||||+|||++.+   +.++++|||..                       
T Consensus       152 ~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y  228 (398)
T 4b99_A          152 SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN---CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY  228 (398)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---CCEEECCCTTCBCC-------CCCCCSSCCCCTT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCC---CCEEEeecceeeecccCccccccccccceeChHh
Confidence            5689999999999999999999999999999999999999887   56677777622                       


Q ss_pred             ------hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--------------------
Q 039869           59 ------HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--------------------  111 (152)
Q Consensus        59 ------~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  111 (152)
                            .+ ..++.++||||+||++|||++|+.||.+.      +..+....+......+                    
T Consensus       229 ~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~------~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~  302 (398)
T 4b99_A          229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK------NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSL  302 (398)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS------SHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSS
T ss_pred             cCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC------CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcC
Confidence                  12 12367899999999999999999888765      3333333321111100                    


Q ss_pred             --C-------CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 --E-------FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 --~-------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        .       ....+++++.+||.+||..||++|||+.++|+||||++
T Consensus       303 ~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  350 (398)
T 4b99_A          303 PPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK  350 (398)
T ss_dssp             CCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred             CCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence              0       11346889999999999999999999999999999986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.2e-37  Score=220.42  Aligned_cols=141  Identities=21%  Similarity=0.296  Sum_probs=105.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.+++||+.||+|||++||+||||||+|||++.+.  +.++++|||..                        
T Consensus       112 ~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~--~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~  189 (361)
T 4f9c_A          112 NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL--KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCS  189 (361)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT--TEEEECCCTTCEECTTCSCGGGGGC----------
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC--CeEEECcCCCCcccCCccccccccccccccccccc
Confidence            3589999999999999999999999999999999999997541  34566666632                        


Q ss_pred             -----------------------------hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--
Q 039869           59 -----------------------------HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--  106 (152)
Q Consensus        59 -----------------------------~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  106 (152)
                                                   .+ ..++.++||||+||++|+|++|+.||+...     +..+....+..  
T Consensus       190 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~-----~~~~~l~~I~~~~  264 (361)
T 4f9c_A          190 QNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS-----DDLTALAQIMTIR  264 (361)
T ss_dssp             ----------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS-----SHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHHhc
Confidence                                         12 124678999999999999999998886543     21111111000  


Q ss_pred             ------------------------------------c--------------CCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869          107 ------------------------------------S--------------SEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus       107 ------------------------------------~--------------~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                                                          .              .........+++++.+||.+||..||++|
T Consensus       265 G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R  344 (361)
T 4f9c_A          265 GSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASR  344 (361)
T ss_dssp             CHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTS
T ss_pred             CCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHC
Confidence                                                0              00011234578999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      +|+.|+|+||||++
T Consensus       345 ~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          345 ITAEEALLHPFFKD  358 (361)
T ss_dssp             CCHHHHHTSGGGTT
T ss_pred             cCHHHHhcCcccCC
Confidence            99999999999986

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-35  Score=208.79  Aligned_cols=140  Identities=19%  Similarity=0.372  Sum_probs=112.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++.++..++.||+.||+|||+++|+||||||+|||++.+   ..++++|||..                       
T Consensus       126 ~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymA  202 (307)
T 3omv_A          126 ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEG---LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA  202 (307)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETT---EEEEECCCSSCBC------------CCCCTTSCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCC---CcEEEeeccCceecccCCcceeecccccCCCccC
Confidence            3579999999999999999999999999999999999999987   67788888721                       


Q ss_pred             ----h---cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC---CCCCCCChhHHHHHHHh
Q 039869           59 ----H---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKC  128 (152)
Q Consensus        59 ----~---~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~  128 (152)
                          .   ...++.++|||||||++|||++|+.||.+..     ....+...+......+   ..+..+++++.+++.+|
T Consensus       203 PE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~c  277 (307)
T 3omv_A          203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----NRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADC  277 (307)
T ss_dssp             HHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHH
T ss_pred             HHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHH
Confidence                1   1235678999999999999999997776542     4444555554443333   45677999999999999


Q ss_pred             hccccCCCcCHHHH------hcCCCCC
Q 039869          129 FIRVHQLRWTAKHV------LAHPFPS  149 (152)
Q Consensus       129 l~~~p~~R~~~~~~------l~h~~~~  149 (152)
                      |..||++|||+.++      ++|++.+
T Consensus       278 l~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          278 VKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             TCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             cCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence            99999999999875      5787754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4.2e-36  Score=228.35  Aligned_cols=141  Identities=21%  Similarity=0.266  Sum_probs=118.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------h-
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------R-   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------~-   58 (152)
                      ++|++..++.|+.||+.||+|||++||+||||||+|||++.+   +.++|+|||.                       . 
T Consensus       287 ~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~---G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT---SCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCC---CCEEecccceeeecCCCCCCCccCCcCccCHHHHh
Confidence            579999999999999999999999999999999999999988   6788888881                       2 


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++|+||+||++|||++|..||.+....   +...+...+..  ....+|..+++++.+||.+||..||++|++
T Consensus       364 ~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~---~~~~i~~~i~~--~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~  438 (689)
T 3v5w_A          364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---DKHEIDRMTLT--MAVELPDSFSPELRSLLEGLLQRDVNRRLG  438 (689)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC---CHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSCGGGCTT
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhhcC--CCCCCCccCCHHHHHHHHHHccCCHhHCCC
Confidence            3455788999999999999999999888765321   33344444432  334677889999999999999999999998


Q ss_pred             -----HHHHhcCCCCCCC
Q 039869          139 -----AKHVLAHPFPSVD  151 (152)
Q Consensus       139 -----~~~~l~h~~~~~~  151 (152)
                           +.++++||||++-
T Consensus       439 ~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          439 CLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             CSSSTHHHHTTSGGGTTC
T ss_pred             CCCCCHHHHhcCccccCC
Confidence                 6999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.7e-35  Score=208.10  Aligned_cols=131  Identities=21%  Similarity=0.300  Sum_probs=111.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .+|++.++..++.||+.||+|||+++|+||||||+|||++.+   ..++++|||.                         
T Consensus       123 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP  199 (299)
T 4asz_A          123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  199 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC---CcEEECCcccceecCCCCceeecCceecChhhcCH
Confidence            468999999999999999999999999999999999999887   6778888872                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        ..+..++.++|||||||++||++| |+.||.+.      +..++...+..+. .++.|..+++++.+++.+||..||+
T Consensus       200 E~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~------~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~  272 (299)
T 4asz_A          200 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL------SNNEVIECITQGR-VLQRPRTCPQEVYELMLGCWQREPH  272 (299)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS------CHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChh
Confidence              223345789999999999999998 78776654      5667776666544 4567889999999999999999999


Q ss_pred             CCcCHHHHh
Q 039869          135 LRWTAKHVL  143 (152)
Q Consensus       135 ~R~~~~~~l  143 (152)
                      +||++.+++
T Consensus       273 ~RPs~~~i~  281 (299)
T 4asz_A          273 MRKNIKGIH  281 (299)
T ss_dssp             GSCCHHHHH
T ss_pred             HCcCHHHHH
Confidence            999999884

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.2e-35  Score=209.95  Aligned_cols=132  Identities=20%  Similarity=0.240  Sum_probs=111.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ++|++.++..++.||+.||+|||+++|+||||||+|||++.+   ..+|++|||.                         
T Consensus       153 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP  229 (329)
T 4aoj_A          153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG---LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP  229 (329)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT---TEEEECCCC----------------CCCCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC---CcEEEcccccceeccCCCcceecCcccccccccCh
Confidence            469999999999999999999999999999999999999987   6777777772                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        ..+..++.++|||||||++||++| |+.||.+.      +..++...+..+. .++.|..+++++.+++.+||..||+
T Consensus       230 E~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~------~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl~~dP~  302 (329)
T 4aoj_A          230 ESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL------SNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQ  302 (329)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS------CHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHCCSSTT
T ss_pred             hhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcCC-CCCCcccccHHHHHHHHHHcCcChh
Confidence              223345788999999999999999 78676654      5566666665543 4567889999999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +|||+.++++
T Consensus       303 ~RPs~~ei~~  312 (329)
T 4aoj_A          303 QRHSIKDVHA  312 (329)
T ss_dssp             TSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.3e-35  Score=212.72  Aligned_cols=134  Identities=16%  Similarity=0.235  Sum_probs=111.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.++..++.||+.||+|||+++|+||||||+|||++.+   +.+|++|||..                        
T Consensus       180 ~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~---~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP  256 (353)
T 4ase_A          180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  256 (353)
T ss_dssp             TCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC---CCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence            458999999999999999999999999999999999999887   67888998833                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|||||||++||++| |+.||.+..     ....+...+.. ...+..|..+++++.+++.+||..||+
T Consensus       257 E~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~-----~~~~~~~~i~~-g~~~~~p~~~~~~~~~li~~c~~~dP~  330 (353)
T 4ase_A          257 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPS  330 (353)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----CSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHHc-CCCCCCCccCCHHHHHHHHHHcCcChh
Confidence               23335788999999999999998 787776542     33444444443 345667888999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +|||+.++++|
T Consensus       331 ~RPt~~eil~~  341 (353)
T 4ase_A          331 QRPTFSELVEH  341 (353)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999876

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4e-35  Score=206.92  Aligned_cols=133  Identities=20%  Similarity=0.256  Sum_probs=111.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++.++..++.||+.||+|||+++|+||||||+|||++.+   ..+|++|||.                         
T Consensus       140 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~---~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP  216 (308)
T 4gt4_A          140 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK---LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP  216 (308)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCC---CCEEECCcccceeccCCCceeEecccccCCcccCH
Confidence            468999999999999999999999999999999999999887   6778888872                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        ..+..++.++|||||||++||++| |..||.+.      +..++...+..+. .++.|..++.++.+++.+||..||+
T Consensus       217 E~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~------~~~~~~~~i~~~~-~~~~p~~~~~~~~~li~~C~~~dP~  289 (308)
T 4gt4_A          217 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY------SNQDVVEMIRNRQ-VLPCPDDCPAWVYALMIECWNEFPS  289 (308)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC------CHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcCC-CCCCcccchHHHHHHHHHHcCCChh
Confidence              223335788999999999999998 77666554      5666776665443 4567889999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       290 ~RPs~~ei~~~  300 (308)
T 4gt4_A          290 RRPRFKDIHSR  300 (308)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999998753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=9.8e-36  Score=209.39  Aligned_cols=134  Identities=16%  Similarity=0.154  Sum_probs=102.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------------
Q 039869            6 PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------------   57 (152)
Q Consensus         6 ~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------------   57 (152)
                      ++..++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||.                            
T Consensus       116 ~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~---~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~G  192 (299)
T 4g31_A          116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVG  192 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECCCCCC--------------------------C
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCC---CcEEEccCccceecCCCccccccccccccccccCCccc
Confidence            456789999999999999999999999999999999877   5667777762                            


Q ss_pred             ---------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHh
Q 039869           58 ---------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKC  128 (152)
Q Consensus        58 ---------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  128 (152)
                               ..+..++.++||||+||++|||++   ||.+..     ........+... ..++.+...++...+++.+|
T Consensus       193 T~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~~  263 (299)
T 4g31_A          193 TKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVRTLTDVRNL-KFPPLFTQKYPCEYVMVQDM  263 (299)
T ss_dssp             CCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHHHHHHHTT-CCCHHHHHHCHHHHHHHHHH
T ss_pred             CccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHHHHHHHhcC-CCCCCCcccCHHHHHHHHHH
Confidence                     123345788999999999999996   554321     112222223222 22223344567788999999


Q ss_pred             hccccCCCcCHHHHhcCCCCCCC
Q 039869          129 FIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      |..||++||++.++++||||++-
T Consensus       264 L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          264 LSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             cCCChhHCcCHHHHhcCHhhCCC
Confidence            99999999999999999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.6e-35  Score=221.40  Aligned_cols=142  Identities=25%  Similarity=0.404  Sum_probs=117.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~~   58 (152)
                      ++|++.+++.|++||+.||+|||++||+||||||+|||++.. ..+.++++|||                        ..
T Consensus       250 ~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~  328 (573)
T 3uto_A          250 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA  328 (573)
T ss_dssp             SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeEccCCCceeeeEECccccCHHHh
Confidence            468999999999999999999999999999999999999743 12456788887                        23


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++||||+||++|+|++|..||.+.      +..+....+......  ...+..+++++.+||.+||..||++|
T Consensus       329 ~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R  402 (573)
T 3uto_A          329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGE------NDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR  402 (573)
T ss_dssp             TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHC
Confidence            3455678899999999999999999888766      556666666544332  23346789999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      |++.++++||||+..
T Consensus       403 ~t~~e~l~Hpw~~~~  417 (573)
T 3uto_A          403 MTIHQALEHPWLTPG  417 (573)
T ss_dssp             CCHHHHHHSTTTSCC
T ss_pred             cCHHHHhcCcCcCCC
Confidence            999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.1e-33  Score=199.92  Aligned_cols=138  Identities=20%  Similarity=0.306  Sum_probs=115.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       109 ~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  185 (328)
T 3fe3_A          109 GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF  185 (328)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCC---CCEEEeeccCceecCCCCccccccCCcceeCcccc
Confidence            568999999999999999999999999999999999999887   56677777622                        


Q ss_pred             hcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..+ +.++||||+||++|++++|+.||.+.      +...+...+..+..  ..|..++.++.+++.+||..||++||
T Consensus       186 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~  257 (328)
T 3fe3_A          186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ------NLKELRERVLRGKY--RIPFYMSTDCENLLKRFLVLNPIKRG  257 (328)
T ss_dssp             HTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHCCSSTTTSC
T ss_pred             cCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHCCCChhHCc
Confidence            12222 36799999999999999999777665      55666666654433  45678999999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      |+.++++||||+..
T Consensus       258 t~~eil~h~~~~~~  271 (328)
T 3fe3_A          258 TLEQIMKDRWINAG  271 (328)
T ss_dssp             CHHHHTTCTTTTTT
T ss_pred             CHHHHhcCHhhcCC
Confidence            99999999999753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.3e-33  Score=197.71  Aligned_cols=140  Identities=28%  Similarity=0.441  Sum_probs=107.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------hh
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------RH   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~~   59 (152)
                      .+++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                        ..
T Consensus       116 ~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  192 (308)
T 3g33_A          116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLL  192 (308)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTT---SCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC---CCEEEeeCccccccCCCcccCCccccccccCchHHc
Confidence            48999999999999999999999999999999999999877   5667777762                        22


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCCC------------------------CCC
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEVP------------------------EFP  114 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------------~~~  114 (152)
                      +..++.++|+||+||++|++++|+.||.+.      ........+ ......+                        ...
T Consensus       193 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (308)
T 3g33_A          193 QSTYATPVDMWSVGCIFAEMFRRKPLFCGN------SEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVV  266 (308)
T ss_dssp             TSCCCSTHHHHHHHHHHHHTTTSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHS
T ss_pred             CCCCCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhC
Confidence            344578899999999999999999777665      333333222 1111111                        011


Q ss_pred             CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCCC
Q 039869          115 SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVDE  152 (152)
Q Consensus       115 ~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~~  152 (152)
                      ..+++++.+++.+||..||++|||+.++++||||++++
T Consensus       267 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          267 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             ccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            35788999999999999999999999999999999753

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.3e-33  Score=198.36  Aligned_cols=139  Identities=25%  Similarity=0.353  Sum_probs=114.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  187 (297)
T 3fxz_A          111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV  187 (297)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCC---CCEEEeeCCCceecCCcccccCCccCCcCccChhh
Confidence            358899999999999999999999999999999999999877   5667777762                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHH-HHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+..++.++|+||+|+++|++++|..||.+.      +.... .............+..++..+.+++.+||..||++|
T Consensus       188 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  261 (297)
T 3fxz_A          188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR  261 (297)
T ss_dssp             HHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHC
Confidence            22344578899999999999999999777655      33333 333333344445567799999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.++++||||+.
T Consensus       262 ps~~ell~h~~~~~  275 (297)
T 3fxz_A          262 GSAKELLQHQFLKI  275 (297)
T ss_dssp             CCHHHHTTCGGGGG
T ss_pred             cCHHHHhhChhhcc
Confidence            99999999999975

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.7e-33  Score=196.07  Aligned_cols=141  Identities=24%  Similarity=0.373  Sum_probs=110.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        95 ~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE  171 (292)
T 3o0g_A           95 NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN---GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD  171 (292)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEeecccceecCCccccccCCccccCCcChH
Confidence            4679999999999999999999999999999999999999877   56677777622                       


Q ss_pred             --hcC-CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCC------------------------
Q 039869           59 --HGL-LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSE------------------------  109 (152)
Q Consensus        59 --~~~-~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------------  109 (152)
                        .+. .++.++|+||+||++|++++|..|++...     +.......+..  +..                        
T Consensus       172 ~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (292)
T 3o0g_A          172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT  246 (292)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTC
T ss_pred             HHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCc
Confidence              122 25788999999999999999887876543     33333332211  000                        


Q ss_pred             -CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          110 -VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       110 -~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       .......++.++.+++.+||..||++|||+.++++||||++
T Consensus       247 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  288 (292)
T 3o0g_A          247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             chhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence             01122357889999999999999999999999999999986

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=8e-33  Score=203.89  Aligned_cols=143  Identities=20%  Similarity=0.278  Sum_probs=118.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+||+++.......++++|||..                       
T Consensus       104 ~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE  183 (444)
T 3soa_A          104 REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE  183 (444)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHH
Confidence            357899999999999999999999999999999999999986544466788888722                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC--CCCCCChhHHHHHHHhhccccC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE--FPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        .+..++.++||||+||++|++++|..||.+.      +...+...+..+....+  ....+++++.+++.+||..||+
T Consensus       184 ~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  257 (444)
T 3soa_A          184 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDE------DQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS  257 (444)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTT
T ss_pred             HhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc------cHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChh
Confidence              2334577899999999999999999888765      55666666655543322  2356899999999999999999


Q ss_pred             CCcCHHHHhcCCCCCC
Q 039869          135 LRWTAKHVLAHPFPSV  150 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~~  150 (152)
                      +||++.++++||||+.
T Consensus       258 ~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          258 KRITAAEALKHPWISH  273 (444)
T ss_dssp             TSCCHHHHHHSCTTHH
T ss_pred             HCCCHHHHhcCccccC
Confidence            9999999999999963

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.5e-33  Score=201.28  Aligned_cols=138  Identities=25%  Similarity=0.387  Sum_probs=116.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       119 ~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~---g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  195 (353)
T 3txo_A          119 RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE---GHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI  195 (353)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCC---------CCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCC---CCEEEccccceeecccCCccccccCCCcCeEChhh
Confidence            568999999999999999999999999999999999999877   56677777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|+|++|..||.+.      +..++...+....  ..+|..++.++.++|.+||..||++||
T Consensus       196 ~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~lL~~dP~~R~  267 (353)
T 3txo_A          196 LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE------NEDDLFEAILNDE--VVYPTWLHEDATGILKSFMTKNPTMRL  267 (353)
T ss_dssp             HHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             cCCCCcCCccCCCcchHHHHHHHhCCCCCCCC------CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhhCHHHcc
Confidence             1222467899999999999999999887665      5566666655433  356678999999999999999999999


Q ss_pred             CH------HHHhcCCCCCCC
Q 039869          138 TA------KHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~------~~~l~h~~~~~~  151 (152)
                      ++      .++++||||++-
T Consensus       268 ~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          268 GSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             TSGGGTCTHHHHTSGGGTTC
T ss_pred             CCcccCCHHHHhhCCcccCC
Confidence            98      899999999863

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=5.3e-33  Score=196.38  Aligned_cols=142  Identities=25%  Similarity=0.431  Sum_probs=109.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       113 ~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE  189 (311)
T 3niz_A          113 KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD  189 (311)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEETTSCCC---CCCCCCTTCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCC---CCEEEccCcCceecCCCcccccCCcccCCcCCHH
Confidence            3468999999999999999999999999999999999999877   55677777621                       


Q ss_pred             --hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCCCC-----------------------
Q 039869           59 --HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSEVP-----------------------  111 (152)
Q Consensus        59 --~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------  111 (152)
                        .+ ..++.++|+||+||++|++++|+.||.+..     ....+...... +...+                       
T Consensus       190 ~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (311)
T 3niz_A          190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT-----DDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKK  264 (311)
T ss_dssp             HHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----TTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCC
T ss_pred             HhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCC
Confidence              12 335778999999999999999997776553     22222221111 11110                       


Q ss_pred             ---CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          112 ---EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       112 ---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                         .....+++++.++|.+||..||++|||+.++++||||++-
T Consensus       265 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          265 PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred             cHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence               0123467889999999999999999999999999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=6.2e-33  Score=199.79  Aligned_cols=143  Identities=24%  Similarity=0.370  Sum_probs=115.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCC-chhHHHHHHHH-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD-AHEAEISAFLQ-----------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~-~~~~~l~~~~~-----------------------   57 (152)
                      ++++++..++.++.||+.||.|||++|++||||||+||+++.++. ...++++|||.                       
T Consensus       109 ~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE  188 (361)
T 2yab_A          109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE  188 (361)
T ss_dssp             CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECch
Confidence            457899999999999999999999999999999999999976531 22567888762                       


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                       ..+..++.++|+||+||++|++++|..||.+.      +..+....+.......  ..+..++.++.++|.+||..||+
T Consensus       189 ~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  262 (361)
T 2yab_A          189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETR  262 (361)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTT
T ss_pred             HHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChh
Confidence             22334577899999999999999999888765      5555555554433221  22356899999999999999999


Q ss_pred             CCcCHHHHhcCCCCCC
Q 039869          135 LRWTAKHVLAHPFPSV  150 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~~  150 (152)
                      +||++.++++||||+.
T Consensus       263 ~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          263 KRLTIQEALRHPWITP  278 (361)
T ss_dssp             TSCCHHHHHTSTTTSC
T ss_pred             HCcCHHHHhcCcCcCC
Confidence            9999999999999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1e-32  Score=196.99  Aligned_cols=138  Identities=26%  Similarity=0.367  Sum_probs=116.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       100 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  176 (337)
T 1o6l_A          100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV  176 (337)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCC---CCEEEeeccchhhcccCCCcccccccChhhCChhh
Confidence            468999999999999999999999999999999999999877   56777777632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|+|++|..||.+.      +...+...+...  ...+|..+++++.++|.+||..||++||
T Consensus       177 ~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~  248 (337)
T 1o6l_A          177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             GSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             hcCCCCCchhhcccchhHHHHHhcCCCCCCCC------CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHHhc
Confidence             2333567899999999999999999887665      555555555433  3356778999999999999999999999


Q ss_pred             -----CHHHHhcCCCCCCC
Q 039869          138 -----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 -----~~~~~l~h~~~~~~  151 (152)
                           ++.++++||||+.-
T Consensus       249 g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          249 GGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TCSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCHHHHHcCCCcCCC
Confidence                 89999999999763

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.5e-33  Score=204.22  Aligned_cols=146  Identities=16%  Similarity=0.223  Sum_probs=113.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.+++.++.||+.||.|||++||+||||||+||+++.....+.++++|||..                        
T Consensus       156 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  235 (400)
T 1nxk_A          156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL  235 (400)
T ss_dssp             -CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhc
Confidence            35899999999999999999999999999999999999987443467788888721                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++|||||||++|++++|..||.+.........  ....+..+...  ......++.++.++|.+||..||++|
T Consensus       236 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  313 (400)
T 1nxk_A          236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR  313 (400)
T ss_dssp             CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHC
Confidence            233457789999999999999999988876543222111  22222222222  12235689999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.++++||||.+
T Consensus       314 pt~~eil~hp~~~~  327 (400)
T 1nxk_A          314 MTITEFMNHPWIMQ  327 (400)
T ss_dssp             CCHHHHHHSHHHHT
T ss_pred             cCHHHHhcCccccC
Confidence            99999999999965

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1e-32  Score=192.87  Aligned_cols=141  Identities=26%  Similarity=0.390  Sum_probs=107.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus        95 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~  171 (288)
T 1ob3_A           95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE---GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV  171 (288)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECCTTHHHHHCC---------CCCTTCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC---CCEEEeECccccccCccccccccccccccccCchh
Confidence            568999999999999999999999999999999999999877   45566666521                        


Q ss_pred             -hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCC--------------CC----------
Q 039869           59 -HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSE--------------VP----------  111 (152)
Q Consensus        59 -~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~----------  111 (152)
                       .+ ..++.++|+||+||++|++++|..||.+..     ....+...... +..              .+          
T Consensus       172 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (288)
T 1ob3_A          172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-----EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW  246 (288)
T ss_dssp             HTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCG
T ss_pred             eeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccH
Confidence             11 235778999999999999999997776542     22222222111 000              00          


Q ss_pred             -CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          112 -EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       112 -~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                       .....+++++.+++.+||..||++||++.++++||||++.
T Consensus       247 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             HHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence             1124578899999999999999999999999999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.3e-33  Score=200.18  Aligned_cols=143  Identities=17%  Similarity=0.257  Sum_probs=116.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++.+++.++.||+.||+|||++||+||||||+||+++.+.....++++|||..                       
T Consensus       122 ~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~  201 (362)
T 2bdw_A          122 REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV  201 (362)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHH
Confidence            356899999999999999999999999999999999999987654456788888732                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhccccCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       .+..++.++|+||+||++|++++|..||.+.      +...+...+..+....+.  ...+++++.+++.+||..||++
T Consensus       202 ~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  275 (362)
T 2bdw_A          202 LKKDPYSKPVDIWACGVILYILLVGYPPFWDE------DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK  275 (362)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGG
T ss_pred             HccCCCCchhhHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhh
Confidence             2234577899999999999999999888765      555666555544433222  2457999999999999999999


Q ss_pred             CcCHHHHhcCCCCCC
Q 039869          136 RWTAKHVLAHPFPSV  150 (152)
Q Consensus       136 R~~~~~~l~h~~~~~  150 (152)
                      ||++.++++||||+.
T Consensus       276 R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          276 RITADQALKVPWICN  290 (362)
T ss_dssp             SCCHHHHTTSHHHHT
T ss_pred             CcCHHHHhcCcccCC
Confidence            999999999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.7e-33  Score=195.33  Aligned_cols=140  Identities=19%  Similarity=0.260  Sum_probs=113.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhc---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG---------------------   60 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~---------------------   60 (152)
                      .+++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||....                     
T Consensus       131 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  207 (298)
T 2zv2_A          131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED---GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE  207 (298)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECSSSSCEECCCCSCGGGCCGG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC---CCEEEecCCCccccccccccccCCcCCccccChh
Confidence            3578999999999999999999999999999999999999877   5677888873210                     


Q ss_pred             ----CC---CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           61 ----LL---LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        61 ----~~---~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          ..   .+.++|+||+|+++|++++|..||.+.      ........+.......+....+++++.+++.+||..||
T Consensus       208 ~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  281 (298)
T 2zv2_A          208 SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE------RIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNP  281 (298)
T ss_dssp             GCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCT
T ss_pred             hhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc------cHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcCh
Confidence                00   145689999999999999999777654      44455555544443334446789999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~  150 (152)
                      ++||++.++++||||+.
T Consensus       282 ~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          282 ESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             TTSCCHHHHTTCHHHHC
T ss_pred             hhCCCHHHHhcCccccC
Confidence            99999999999999853

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=7.5e-33  Score=198.29  Aligned_cols=138  Identities=25%  Similarity=0.425  Sum_probs=116.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       113 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  189 (345)
T 1xjd_A          113 HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD---GHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI  189 (345)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCC---CCEEEeEChhhhhcccCCCcccCCCCCcccCChhh
Confidence            468999999999999999999999999999999999999877   56777777632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+||++|++++|..||.+.      +...+...+....  +.+|..++.++.++|.+||..||++||
T Consensus       190 ~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~lL~~dp~~R~  261 (345)
T 1xjd_A          190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------DEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKRL  261 (345)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHSCSSGGGSB
T ss_pred             hcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHhCC--CCCCcccCHHHHHHHHHHhcCCHhHcC
Confidence             2334577899999999999999999877665      5566666555433  456778999999999999999999999


Q ss_pred             CHH-HHhcCCCCCCC
Q 039869          138 TAK-HVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~-~~l~h~~~~~~  151 (152)
                      ++. ++++||||++-
T Consensus       262 ~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          262 GVRGDIRQHPLFREI  276 (345)
T ss_dssp             TTBSCGGGSGGGTTC
T ss_pred             CChHHHHcCccccCC
Confidence            998 99999999863

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.98  E-value=3.5e-33  Score=197.28  Aligned_cols=136  Identities=26%  Similarity=0.302  Sum_probs=110.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..++.++.|++.||+|||+++++||||||+||+++.+   +.++++|||...                       
T Consensus       152 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  228 (311)
T 3p1a_A          152 ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR---GRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL  228 (311)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGG---GCEEECCCTTCEECC------CCCCCGGGCCGGGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC---CCEEEccceeeeecccCCCCcccCCCccccCHhHh
Confidence            468999999999999999999999999999999999999877   567777776210                       


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      ...++.++||||+||++|++++|..++++..         ....+......+..+..+++++.+++.+||..||++||++
T Consensus       229 ~~~~~~~~DiwslG~il~el~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  299 (311)
T 3p1a_A          229 QGSYGTAADVFSLGLTILEVACNMELPHGGE---------GWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATA  299 (311)
T ss_dssp             GTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH---------HHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCH
Confidence            1135678999999999999999986665431         1222332333334556789999999999999999999999


Q ss_pred             HHHhcCCCCCC
Q 039869          140 KHVLAHPFPSV  150 (152)
Q Consensus       140 ~~~l~h~~~~~  150 (152)
                      .++++||||++
T Consensus       300 ~ell~hp~~~~  310 (311)
T 3p1a_A          300 EALLALPVLRQ  310 (311)
T ss_dssp             HHHHTSGGGSC
T ss_pred             HHHHhCccccC
Confidence            99999999986

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.98  E-value=1.3e-32  Score=192.15  Aligned_cols=143  Identities=20%  Similarity=0.270  Sum_probs=113.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+...+.++++|||...                      
T Consensus       118 ~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~  197 (285)
T 3is5_A          118 GKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV  197 (285)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHH
Confidence            3578999999999999999999999999999999999999654444566777776221                      


Q ss_pred             -cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC-CCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 -GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 -~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       ...++.++|+||+|+++|++++|+.||.+.      ................ .....+++++.+++.+||..||++||
T Consensus       198 ~~~~~~~~~Di~slG~il~~ll~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  271 (285)
T 3is5_A          198 FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGT------SLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRP  271 (285)
T ss_dssp             HTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSC
T ss_pred             hccCCCcccCeehHHHHHHHHHhCCCCCCCC------CHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCc
Confidence             123467899999999999999999777654      4455555444333222 22345789999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||++
T Consensus       272 s~~e~l~hp~f~~  284 (285)
T 3is5_A          272 SAAQVLHHEWFKQ  284 (285)
T ss_dssp             CHHHHHTSGGGGC
T ss_pred             CHHHHhcCHHhhc
Confidence            9999999999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.98  E-value=1.7e-32  Score=196.74  Aligned_cols=138  Identities=21%  Similarity=0.252  Sum_probs=117.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~~   60 (152)
                      +++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||.                      ..+
T Consensus       136 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~  212 (350)
T 1rdq_E          136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILS  212 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCC---CCEEEcccccceeccCCcccccCCccccCHHHhcC
Confidence            468999999999999999999999999999999999999877   5667777762                      233


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC--
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT--  138 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~--  138 (152)
                      ..++.++|+||+||++|++++|..||.+.      +.......+....  ..+|..++.++.++|.+||..||++||+  
T Consensus       213 ~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~lL~~dp~~R~~~~  284 (350)
T 1rdq_E          213 KGYNKAVDWWALGVLIYEMAAGYPPFFAD------QPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFGNL  284 (350)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTCCHHHHHHHHHHSCSCTTTCTTSS
T ss_pred             CCCCCcCCEecccHhHhHHhhCCCCCCCC------CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcCHHhccCCc
Confidence            44578899999999999999999777665      5556666555443  4567789999999999999999999998  


Q ss_pred             ---HHHHhcCCCCCCC
Q 039869          139 ---AKHVLAHPFPSVD  151 (152)
Q Consensus       139 ---~~~~l~h~~~~~~  151 (152)
                         +.++++||||+..
T Consensus       285 ~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          285 KNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TTTTHHHHTSGGGTTC
T ss_pred             cCCHHHHHhCcCcCCC
Confidence               9999999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.98  E-value=3.3e-32  Score=195.19  Aligned_cols=145  Identities=19%  Similarity=0.255  Sum_probs=113.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++.+++.+++.++.|++.||+|||++|++||||||+||+++.....+.++++|||.                        
T Consensus       142 ~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  221 (349)
T 2w4o_A          142 KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI  221 (349)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHH
Confidence            35689999999999999999999999999999999999997532235566666652                        


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                      ..+..++.++|+|||||++|++++|..||....     ........+......  .+....++.++.+++.+||..||++
T Consensus       222 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  296 (349)
T 2w4o_A          222 LRGCAYGPEVDMWSVGIITYILLCGFEPFYDER-----GDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK  296 (349)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT-----CHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGG
T ss_pred             hcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc-----ccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhh
Confidence            223345788999999999999999998876653     333344444332222  2334578999999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      ||++.++++||||++.
T Consensus       297 Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          297 RLTTFQALQHPWVTGK  312 (349)
T ss_dssp             SCCHHHHHHSTTTTST
T ss_pred             CcCHHHHhcCcccCCC
Confidence            9999999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.98  E-value=1.7e-32  Score=194.94  Aligned_cols=144  Identities=22%  Similarity=0.350  Sum_probs=114.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC-CchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK-DAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~-~~~~~~l~~~~~~----------------------   58 (152)
                      ++++++.+++.++.|++.||.|||++|++||||||+||+++.++ ....++++|||..                      
T Consensus       108 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE  187 (326)
T 2y0a_A          108 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE  187 (326)
T ss_dssp             SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHH
T ss_pred             cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCce
Confidence            35689999999999999999999999999999999999997663 2225677787722                      


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        .+..++.++|+||+||++|++++|..||.+.      ...+....+.......  ..+..++..+.+++.+||..||+
T Consensus       188 ~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  261 (326)
T 2y0a_A          188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK  261 (326)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGG
T ss_pred             eecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC------CHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChh
Confidence              2234567899999999999999999877665      4444444443332221  22356889999999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 039869          135 LRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~~~  151 (152)
                      +||++.++++||||+..
T Consensus       262 ~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          262 KRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             GSCCHHHHHHSTTTSCC
T ss_pred             hCCCHHHHhcCCCccCC
Confidence            99999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.98  E-value=1.9e-32  Score=201.12  Aligned_cols=142  Identities=23%  Similarity=0.373  Sum_probs=107.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~~   60 (152)
                      .++++..++.++.||+.||+|||++||+||||||+||+++.++. ..++++|||.                      ..+
T Consensus       195 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~-~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~  273 (429)
T 3kvw_A          195 QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILG  273 (429)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTS-CCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCC-cceEEeecccceecCCcccccCCCCCccChHHHhC
Confidence            45899999999999999999999999999999999999987632 1267788772                      234


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH-HHHHhcCCCC----------------------------
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL-ELIAFSSEVP----------------------------  111 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------------------------  111 (152)
                      ..++.++|||||||++|++++|..||.+.      +..+.. ........++                            
T Consensus       274 ~~~~~~~DiwSlG~il~elltG~~pf~~~------~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (429)
T 3kvw_A          274 ARYGMPIDMWSLGCILAELLTGYPLLPGE------DEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTL  347 (429)
T ss_dssp             BCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECC
T ss_pred             CCCCchHHHHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccccc
Confidence            44678899999999999999999777655      222222 1111100000                            


Q ss_pred             ----------------------------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          112 ----------------------------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       112 ----------------------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                                  .++...++.+.+||.+||.+||++|||+.++++||||+..
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          348 SDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             CC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             ccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence                                        0112346789999999999999999999999999999863

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.98  E-value=2.3e-32  Score=193.81  Aligned_cols=138  Identities=22%  Similarity=0.312  Sum_probs=115.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~~   60 (152)
                      +.+++..++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||.                      ..+
T Consensus       101 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~  177 (318)
T 1fot_A          101 QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN---GHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVST  177 (318)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT---SCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCC---CCEEEeecCcceecCCccccccCCccccCHhHhcC
Confidence            568999999999999999999999999999999999999877   5667777762                      223


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc---
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW---  137 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~---  137 (152)
                      ..++.++|+||+||++|++++|..||.+.      +.......+....  ..+|..++.++.+++.+||..||++||   
T Consensus       178 ~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~lL~~dp~~R~~~~  249 (318)
T 1fot_A          178 KPYNKSIDWWSFGILIYEMLAGYTPFYDS------NTMKTYEKILNAE--LRFPPFFNEDVKDLLSRLITRDLSQRLGNL  249 (318)
T ss_dssp             CCBCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCTTTCTTSS
T ss_pred             CCCCcccchhhhHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCc
Confidence            44578899999999999999999887665      4455555544332  356678999999999999999999999   


Q ss_pred             --CHHHHhcCCCCCCC
Q 039869          138 --TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 --~~~~~l~h~~~~~~  151 (152)
                        ++.++++||||++-
T Consensus       250 ~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          250 QNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             TTTTHHHHTSGGGSSC
T ss_pred             CCCHHHHhcCccccCC
Confidence              89999999999863

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.98  E-value=1.5e-32  Score=199.17  Aligned_cols=139  Identities=25%  Similarity=0.321  Sum_probs=107.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..+..++.|++.||+|||++||+||||||+||+++.+   +.++++|||...                       
T Consensus       104 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~  180 (388)
T 3oz6_A          104 NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAE---CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF  180 (388)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEESSSCCCCCCCGGGCCC------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCC---CCEEecCCccccccccccccccccccccccccccc
Confidence            468899999999999999999999999999999999999877   456666666321                       


Q ss_pred             -----------------------c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCCC---
Q 039869           60 -----------------------G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEVP---  111 (152)
Q Consensus        60 -----------------------~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---  111 (152)
                                             + ..++.++||||+||++|++++|+.||.+.      +.......+ .....+.   
T Consensus       181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~p~~~~  254 (388)
T 3oz6_A          181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS------STMNQLERIIGVIDFPSNED  254 (388)
T ss_dssp             ---------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHH
T ss_pred             ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHH
Confidence                                   1 34577899999999999999999777665      222222221 1100000   


Q ss_pred             -----------------------------------------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 -----------------------------------------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 -----------------------------------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                                               ..+..+++++.+||.+||..||++|||+.++++||||+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          255 VESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             HHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             HHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence                                                     012367889999999999999999999999999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.98  E-value=1.9e-32  Score=199.18  Aligned_cols=141  Identities=29%  Similarity=0.403  Sum_probs=110.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeee-cCCCchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV-AGKDAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~-~~~~~~~~~l~~~~~~----------------------   58 (152)
                      ++.+++..++.++.||+.||+|||++||+||||||+||+++ .+   +.++++|||..                      
T Consensus       135 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~---~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE  211 (394)
T 4e7w_A          135 KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPS---GVLKLIDFGSAKILIAGEPNVSYICSRYYRAPE  211 (394)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT---TEEEECCCTTCEECCTTCCCCSSCSCGGGCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCC---CcEEEeeCCCcccccCCCCCcccccCcCccCHH
Confidence            46789999999999999999999999999999999999998 55   56778888722                      


Q ss_pred             --hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-----------------CCC-------
Q 039869           59 --HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-----------------EVP-------  111 (152)
Q Consensus        59 --~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~-------  111 (152)
                        .+ ..++.++||||+||++|++++|+.||.+..     ....+........                 ..+       
T Consensus       212 ~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-----~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  286 (394)
T 4e7w_A          212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES-----GIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPF  286 (394)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCH
T ss_pred             HHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcH
Confidence              12 236788999999999999999997876652     2222222221100                 000       


Q ss_pred             --CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 --EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 --~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        .++..+++++.+++.+||..||++||++.++++||||++
T Consensus       287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             HHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence              123457889999999999999999999999999999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.98  E-value=2.4e-32  Score=198.69  Aligned_cols=144  Identities=23%  Similarity=0.304  Sum_probs=114.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       148 ~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~---g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~  224 (396)
T 4dc2_A          148 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI  224 (396)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCC---CCEEEeecceeeecccCCCccccccCCcccCCchh
Confidence            568999999999999999999999999999999999999887   56777777632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---CChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                       .+..++.++|+||+||++|+|++|+.||........   .....+...+..  ....+|..++.++.++|.+||..||+
T Consensus       225 l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~lL~~dP~  302 (396)
T 4dc2_A          225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVLKSFLNKDPK  302 (396)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSCTT
T ss_pred             hcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCcCCHHHHHHHHHHhcCCHh
Confidence             233457789999999999999999988754322111   122233333332  23456788999999999999999999


Q ss_pred             CCcCH------HHHhcCCCCCCC
Q 039869          135 LRWTA------KHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~~~------~~~l~h~~~~~~  151 (152)
                      +||++      .++++||||++-
T Consensus       303 ~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          303 ERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             TSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HcCCCCCCCCHHHHhcCccccCC
Confidence            99985      799999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.98  E-value=1.8e-32  Score=190.93  Aligned_cols=143  Identities=17%  Similarity=0.264  Sum_probs=116.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.++....++++|||..                        
T Consensus       100 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (284)
T 3kk8_A          100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL  179 (284)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhh
Confidence            46899999999999999999999999999999999999987655455778887732                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++|+||+|+++|++++|..||.+.      ........+......  ......+++++.+++.+||..||++|
T Consensus       180 ~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  253 (284)
T 3kk8_A          180 KKDPYSKPVDIWACGVILYILLVGYPPFWDE------DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR  253 (284)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             cCCCCCcccchHHHHHHHHHHHHCCCCCCCC------chhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhC
Confidence            2334577899999999999999999887665      455555554443332  22335789999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      |++.++++||||++.
T Consensus       254 ps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          254 ITADQALKVPWICNR  268 (284)
T ss_dssp             CCHHHHTTSHHHHSC
T ss_pred             CCHHHHhcCccccCC
Confidence            999999999999764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.98  E-value=2.9e-32  Score=195.81  Aligned_cols=137  Identities=21%  Similarity=0.290  Sum_probs=115.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       116 ~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  192 (353)
T 2i0e_A          116 GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEI  192 (353)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCC---CcEEEEeCCcccccccCCcccccccCCccccChhh
Confidence            468999999999999999999999999999999999999877   56777777632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+|||||++|+|++|..||.+.      +..++...+....  ..+|..++.++.+++.+||..||++||
T Consensus       193 ~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~  264 (353)
T 2i0e_A          193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELFQSIMEHN--VAYPKSMSKEAVAICKGLMTKHPGKRL  264 (353)
T ss_dssp             HTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCTTSCT
T ss_pred             hcCCCcCCcccccchHHHHHHHHcCCCCCCCC------CHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhhcCHHHcC
Confidence             2334567899999999999999999777665      5566666555433  456778999999999999999999999


Q ss_pred             C-----HHHHhcCCCCCC
Q 039869          138 T-----AKHVLAHPFPSV  150 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~  150 (152)
                      +     +.++++||||+.
T Consensus       265 ~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          265 GCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             TCSTTHHHHHHTSGGGTT
T ss_pred             CCCCCCHHHHhcCccccC
Confidence            5     689999999985

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.98  E-value=2.4e-32  Score=194.06  Aligned_cols=142  Identities=20%  Similarity=0.214  Sum_probs=110.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||...                      
T Consensus        99 ~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~a  175 (323)
T 3tki_A           99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA  175 (323)
T ss_dssp             TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECEETTEECCBCSCCSCGGGSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCC---CCEEEEEeeccceeccCCcccccCCCccCcCccC
Confidence            3468999999999999999999999999999999999999877   566777776321                      


Q ss_pred             -----cCC-CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           60 -----GLL-LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        60 -----~~~-~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                           +.. .+.++|+||+||++|++++|..||....     .....................++.++.+++.+||..||
T Consensus       176 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  250 (323)
T 3tki_A          176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS-----DSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENP  250 (323)
T ss_dssp             HHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC-----TTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             cHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCCh
Confidence                 112 2457999999999999999997776543     22122222222222223345689999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~~  151 (152)
                      ++||++.++++||||+..
T Consensus       251 ~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          251 SARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             TTSCCHHHHTTCTTTTCC
T ss_pred             hhCcCHHHHhhChhhccc
Confidence            999999999999999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.98  E-value=2.6e-32  Score=193.99  Aligned_cols=143  Identities=22%  Similarity=0.262  Sum_probs=115.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.|++.||+|||++|++||||||+||+++.....+.++++|||..                        
T Consensus       126 ~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  205 (327)
T 3lm5_A          126 EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL  205 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeee
Confidence            56899999999999999999999999999999999999987333356777777622                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--CCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--EVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++|+||+|+++|++++|+.||.+.      ........+....  .....+..++..+.+++.+||..||++|
T Consensus       206 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  279 (327)
T 3lm5_A          206 NYDPITTATDMWNIGIIAYMLLTHTSPFVGE------DNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR  279 (327)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhC
Confidence            2334577899999999999999999777665      4444443333222  2334456789999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      |++.++++||||++-
T Consensus       280 pt~~~ll~h~~~~~~  294 (327)
T 3lm5_A          280 PTAEICLSHSWLQQW  294 (327)
T ss_dssp             CCHHHHTTCGGGCCC
T ss_pred             cCHHHHhCCHhhccc
Confidence            999999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.98  E-value=3.5e-32  Score=193.50  Aligned_cols=144  Identities=22%  Similarity=0.321  Sum_probs=107.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC--CchhHHHHHHHHh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK--DAHEAEISAFLQR---------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~--~~~~~~l~~~~~~---------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++|++||||||+||+++.++  ....++++|||..                     
T Consensus       126 ~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~a  205 (329)
T 3gbz_A          126 NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP  205 (329)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccC
Confidence            35689999999999999999999999999999999999996432  1234666666521                     


Q ss_pred             ----hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH-HHHHhcCCCCC--------------------
Q 039869           59 ----HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL-ELIAFSSEVPE--------------------  112 (152)
Q Consensus        59 ----~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------------------  112 (152)
                          .+ ..++.++||||+||++|++++|..||.+.      ...... ...........                    
T Consensus       206 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (329)
T 3gbz_A          206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD------SEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFR  279 (329)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCC
T ss_pred             HHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC------CHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhc
Confidence                12 23578899999999999999999777654      333222 22221111100                    


Q ss_pred             -------CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 -------FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 -------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                             .+..++.++.++|.+||..||++||++.++++||||++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          280 GKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             CCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             cccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence                   011167889999999999999999999999999999874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.98  E-value=2.2e-32  Score=191.18  Aligned_cols=141  Identities=18%  Similarity=0.315  Sum_probs=114.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeee-cCCCchhHHHHHHHHhh--------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLV-AGKDAHEAEISAFLQRH--------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~-~~~~~~~~~l~~~~~~~--------------------   59 (152)
                      +++++..++.++.|++.||.|||+.+  ++|+||||+||+++ .+   +.++++||+...                    
T Consensus       124 ~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE  200 (290)
T 1t4h_A          124 KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---GSVKIGDLGLATLKRASFAKAVIGTPEFMAPE  200 (290)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT---SCEEECCTTGGGGCCTTSBEESCSSCCCCCGG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCC---CCEEEeeCCCcccccccccccccCCcCcCCHH
Confidence            56889999999999999999999999  99999999999997 45   567778877321                    


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                        ...++.++|+||+|+++|++++|..||....     ..................+...++++.+++.+||..||++||
T Consensus       201 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  275 (290)
T 1t4h_A          201 MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY  275 (290)
T ss_dssp             GGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHhccCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCC
Confidence              1124678999999999999999997776543     455555555544444455667889999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++++||||+++
T Consensus       276 s~~ell~h~~f~~~  289 (290)
T 1t4h_A          276 SIKDLLNHAFFQEE  289 (290)
T ss_dssp             CHHHHHTSGGGC--
T ss_pred             CHHHHhhCcccccC
Confidence            99999999999975

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.98  E-value=1.4e-32  Score=197.27  Aligned_cols=141  Identities=21%  Similarity=0.305  Sum_probs=113.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.||+.||+|||++|++||||||+||+++.+.....++++||+..                        
T Consensus       125 ~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~  204 (351)
T 3c0i_A          125 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV  204 (351)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHH
Confidence            45899999999999999999999999999999999999987655455778887722                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       .+..++.++||||+||++|++++|..||.+.       .......+.......  .....++.++.+++.+||..||++
T Consensus       205 ~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  277 (351)
T 3c0i_A          205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGT-------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE  277 (351)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-------HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             HcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-------HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhH
Confidence             2233577899999999999999999777653       234444443333221  122568999999999999999999


Q ss_pred             CcCHHHHhcCCCCCC
Q 039869          136 RWTAKHVLAHPFPSV  150 (152)
Q Consensus       136 R~~~~~~l~h~~~~~  150 (152)
                      ||++.++++||||++
T Consensus       278 R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          278 RITVYEALNHPWLKE  292 (351)
T ss_dssp             SCCHHHHHTSHHHHT
T ss_pred             CcCHHHHhcChhhcC
Confidence            999999999999975

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.98  E-value=1.4e-32  Score=191.89  Aligned_cols=141  Identities=21%  Similarity=0.326  Sum_probs=110.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++ |++||||||+||+++.+   +.++++|||..                      
T Consensus       103 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE  179 (290)
T 3fme_A          103 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL---GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE  179 (290)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTT---CCEEBCCC---------------CCCCCCSCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC---CCEEEeecCCcccccccccccccCCCccccChh
Confidence            46799999999999999999999998 99999999999999877   45666666521                      


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                            .+..++.++|+||+|+++|++++|..|+....     ..................+..++.++.+++.+||..|
T Consensus       180 ~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  254 (290)
T 3fme_A          180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKN  254 (290)
T ss_dssp             HHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-----CHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSS
T ss_pred             hcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-----chHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcC
Confidence                  23345678999999999999999997775432     3333333333333333334578999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~  150 (152)
                      |++||++.++++||||+.
T Consensus       255 p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          255 SKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             GGGSCCHHHHTTSHHHHH
T ss_pred             hhhCcCHHHHHhCccccc
Confidence            999999999999999964

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=6.1e-33  Score=196.97  Aligned_cols=142  Identities=23%  Similarity=0.357  Sum_probs=114.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.+++.++.|++.||.|||++|++||||||+||+++.+. ...++++|||..                        
T Consensus        97 ~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  175 (321)
T 1tki_A           97 FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH  175 (321)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCC-CCCEEEEECCCCeECCCCCccccccCChhhcCcHHh
Confidence            4689999999999999999999999999999999999998521 256778888732                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC--CCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE--FPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++|+||+|+++|++++|..||.+.      ........+........  ....++.++.+++.+||..||++|
T Consensus       176 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T 1tki_A          176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAE------TNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             TTCEECHHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCcCC------CHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHC
Confidence            2223467899999999999999999887665      45555555544433221  224689999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      |++.++++||||++.
T Consensus       250 pt~~e~l~hp~~~~~  264 (321)
T 1tki_A          250 MTASEALQHPWLKQK  264 (321)
T ss_dssp             CCHHHHHHSHHHHSC
T ss_pred             cCHHHHhcChhhccC
Confidence            999999999999753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=2.6e-32  Score=195.66  Aligned_cols=141  Identities=27%  Similarity=0.339  Sum_probs=115.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       148 ~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~  224 (348)
T 1u5q_A          148 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPANSFVGTPYWMAPEVILA  224 (348)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT---TEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC---CCEEEeeccCceecCCCCcccCCcceeCHhhhcc
Confidence            3578999999999999999999999999999999999999877   56777777622                       


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|||||||++|++++|..|+.+.      +.......+.........+..+++.+.+++.+||..||++||
T Consensus       225 ~~~~~~~~~~DiwslG~il~ell~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  298 (348)
T 1u5q_A          225 MDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP  298 (348)
T ss_dssp             TSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCc
Confidence             1344577899999999999999999777654      444444444444444444567899999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++++||||..+
T Consensus       299 s~~~ll~h~~~~~~  312 (348)
T 1u5q_A          299 TSEVLLKHRFVLRE  312 (348)
T ss_dssp             CHHHHTTCHHHHSC
T ss_pred             CHHHHhhChhhhcc
Confidence            99999999998653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=2.6e-32  Score=193.30  Aligned_cols=139  Identities=23%  Similarity=0.367  Sum_probs=108.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       103 ~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~  179 (317)
T 2pmi_A          103 RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKR---GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV  179 (317)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCC---CCEEECcCccceecCCCcccCCCCcccccccCchH
Confidence            458999999999999999999999999999999999999877   55677777621                        


Q ss_pred             -hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCCC------------------------
Q 039869           59 -HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSEV------------------------  110 (152)
Q Consensus        59 -~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------------------  110 (152)
                       .+ ..++.++|+||+||++|++++|+.||.+.      ...+....+..  +...                        
T Consensus       180 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (317)
T 2pmi_A          180 LMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT------NDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRD  253 (317)
T ss_dssp             HTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCC
T ss_pred             hhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchh
Confidence             12 23577899999999999999999777654      33333222211  0000                        


Q ss_pred             ------CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 ------PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                            +..+..++.++.+++.+||..||++||++.++++||||++
T Consensus       254 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  299 (317)
T 2pmi_A          254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE  299 (317)
T ss_dssp             SHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence                  0112357889999999999999999999999999999975

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=5.9e-32  Score=199.35  Aligned_cols=138  Identities=25%  Similarity=0.377  Sum_probs=115.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +.+++..++.++.||+.||+|||+ +||+||||||+||+++.+   +.++++|||.                        
T Consensus       243 ~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE  319 (446)
T 4ejn_A          243 RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD---GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE  319 (446)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSS---SCEEECCCCCCCTTCC-----CCSSSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCC---CCEEEccCCCceeccCCCcccccccCCccccCHh
Confidence            468999999999999999999998 999999999999999877   5667777762                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..++.++|+||+||++|++++|+.||.+.      +.......+....  ..+|..+++++.++|.+||..||++|
T Consensus       320 ~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R  391 (446)
T 4ejn_A          320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQR  391 (446)
T ss_dssp             HHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             hcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC------CHHHHHHHHHhCC--CCCCccCCHHHHHHHHHHcccCHHHh
Confidence             22344578899999999999999999887665      5555555554333  34677899999999999999999999


Q ss_pred             c-----CHHHHhcCCCCCCC
Q 039869          137 W-----TAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~-----~~~~~l~h~~~~~~  151 (152)
                      |     ++.++++||||++-
T Consensus       392 ~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          392 LGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             TTCSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCCHHHHHhCccccCC
Confidence            9     99999999999863

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=2.5e-32  Score=195.18  Aligned_cols=140  Identities=26%  Similarity=0.372  Sum_probs=111.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++||+||||||+||+++.    +.++++|||..                       
T Consensus       102 ~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~----~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a  177 (343)
T 3dbq_A          102 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP  177 (343)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCCC------------CCCCSSCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEEC----CcEEEeecccccccCcccccccCCCCcCCcCcCC
Confidence            357899999999999999999999999999999999999973    34677777521                       


Q ss_pred             ----h-----------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHH
Q 039869           59 ----H-----------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRD  123 (152)
Q Consensus        59 ----~-----------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (152)
                          .           ...++.++||||+||++|++++|+.||....     ..................+...+.++.+
T Consensus       178 PE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~  252 (343)
T 3dbq_A          178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNHEIEFPDIPEKDLQD  252 (343)
T ss_dssp             HHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTSCCCCCCCSCHHHHH
T ss_pred             HHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCcccCCcccCCHHHHH
Confidence                0           1334567999999999999999997775532     3333333343344455667778899999


Q ss_pred             HHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          124 FLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       124 ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ++.+||..||++||++.++++||||+.
T Consensus       253 li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          253 VLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHHHcCCChhHCCCHHHHHhCccccc
Confidence            999999999999999999999999964

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=1.5e-32  Score=195.28  Aligned_cols=150  Identities=18%  Similarity=0.224  Sum_probs=111.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.++....++++|||..                       
T Consensus       100 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE  179 (325)
T 3kn6_A          100 KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE  179 (325)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHH
Confidence            357899999999999999999999999999999999999976543345677777622                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCC-CCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhcccc
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGR-GLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p  133 (152)
                        .+..++.++|+||+|+++|++++|..||.+.... ......++...+..+......  ...+++++.+++.+||..||
T Consensus       180 ~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  259 (325)
T 3kn6_A          180 LLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDP  259 (325)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCT
T ss_pred             HhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCCh
Confidence              2334567899999999999999999777654321 112334455555443322211  13589999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~~  151 (152)
                      ++||++.++++||||++.
T Consensus       260 ~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          260 NKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             TTCCCTTTSTTCGGGCTT
T ss_pred             hHCCCHHHHhcChhhccC
Confidence            999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=3.5e-32  Score=193.02  Aligned_cols=141  Identities=28%  Similarity=0.399  Sum_probs=113.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++..++.++.|++.||+|||+.|++||||||+||+++.+   +.++++|||..                       
T Consensus       135 ~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  211 (321)
T 2c30_A          135 QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE  211 (321)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC---CcEEEeeeeeeeecccCccccccccCCccccCHh
Confidence            3468999999999999999999999999999999999999877   55677777621                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-CCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-VPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++|+.||.+.      ........+..... ....+..+++.+.+++.+||..||++
T Consensus       212 ~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  285 (321)
T 2c30_A          212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD------SPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE  285 (321)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhh
Confidence              2233567899999999999999999777654      44444444433222 12233468899999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      ||++.++++||||.+.
T Consensus       286 Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          286 RATAQELLDHPFLLQT  301 (321)
T ss_dssp             SCCHHHHHTSGGGGGC
T ss_pred             CcCHHHHhcChhhccC
Confidence            9999999999999753

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=9e-32  Score=192.69  Aligned_cols=144  Identities=23%  Similarity=0.302  Sum_probs=113.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||...                       
T Consensus       105 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  181 (345)
T 3a8x_A          105 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI  181 (345)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC---CCEEEEeccccccccCCCCcccccCCCccccCccc
Confidence            468999999999999999999999999999999999999877   567788887332                       


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---CChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        +..++.++|+||+||++|+|++|..||........   .....+...+...  ...+|..++.++.++|.+||..||+
T Consensus       182 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~  259 (345)
T 3a8x_A          182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKAASVLKSFLNKDPK  259 (345)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTT
T ss_pred             cCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhcCCHh
Confidence              23346789999999999999999977754321111   1223333334332  3456778999999999999999999


Q ss_pred             CCcCH------HHHhcCCCCCCC
Q 039869          135 LRWTA------KHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~~~------~~~l~h~~~~~~  151 (152)
                      +||++      .+++.||||++-
T Consensus       260 ~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          260 ERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             TSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HCCCCCCcCCHHHHhcCCccCCC
Confidence            99985      799999999863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=7.6e-32  Score=195.70  Aligned_cols=142  Identities=23%  Similarity=0.341  Sum_probs=114.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.+++.++.||+.||+|||++|++||||||+||+++.+. ...++++|||..                        
T Consensus       144 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~-~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  222 (387)
T 1kob_A          144 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV  222 (387)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT-CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCC-CCceEEEecccceecCCCcceeeeccCCCccCchhc
Confidence            4689999999999999999999999999999999999997431 145677887722                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC--CCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE--VPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++|+||+||++|++++|..||.+.      +.......+.....  ....+..++.++.++|.+||..||++|
T Consensus       223 ~~~~~~~~~DiwSlG~il~elltg~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  296 (387)
T 1kob_A          223 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR  296 (387)
T ss_dssp             TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             cCCCCCCcccEeeHhHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHC
Confidence            2333567899999999999999999777665      44455544443332  223446789999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      |++.++++||||++.
T Consensus       297 pt~~ell~hp~~~~~  311 (387)
T 1kob_A          297 LTVHDALEHPWLKGD  311 (387)
T ss_dssp             CCHHHHHTSTTTSSC
T ss_pred             cCHHHHhhCccccCC
Confidence            999999999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=3.7e-32  Score=192.98  Aligned_cols=140  Identities=25%  Similarity=0.371  Sum_probs=108.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++.+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                        
T Consensus        94 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE  170 (324)
T 3mtl_A           94 GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER---GELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD  170 (324)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTT---CCEEECSSSEEECC------------CGGGCCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCC---CCEEEccCcccccccCCccccccccCcccccChh
Confidence            3568999999999999999999999999999999999999877   4556666651                        


Q ss_pred             -hhc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCCCCC---------------------
Q 039869           58 -RHG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSEVPE---------------------  112 (152)
Q Consensus        58 -~~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------------------  112 (152)
                       ..+ ..++.++|+||+||++|++++|+.||.+.      +..+....+..  +.....                     
T Consensus       171 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
T 3mtl_A          171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS------TVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRA  244 (324)
T ss_dssp             HHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCC
T ss_pred             hhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccc
Confidence             112 34578899999999999999999777664      33333222211  111000                     


Q ss_pred             -----CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 -----FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 -----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                           ....++.++.++|.+||..||++|||+.++++||||.+
T Consensus       245 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          245 EALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             hhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence                 11346788999999999999999999999999999975

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=4e-32  Score=198.96  Aligned_cols=142  Identities=25%  Similarity=0.351  Sum_probs=109.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++..++.++.||+.||+|||++||+||||||+||+++.+.  ..++++|||..                       
T Consensus       150 ~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~--~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~  227 (420)
T 1j1b_A          150 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL  227 (420)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT--TEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC--CeEEeccchhhhhcccCCCceeeeeCCCcCCHHH
Confidence            46789999999999999999999999999999999999998542  35678888722                       


Q ss_pred             -hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-----------------CCCC-------
Q 039869           59 -HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-----------------EVPE-------  112 (152)
Q Consensus        59 -~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-------  112 (152)
                       .+ ..++.++||||+||++|||++|+.||.+..     ....+...+....                 ..+.       
T Consensus       228 ~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~-----~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~  302 (420)
T 1j1b_A          228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-----GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT  302 (420)
T ss_dssp             HTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHH
T ss_pred             HcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHH
Confidence             12 245778999999999999999997776652     2222222221100                 0000       


Q ss_pred             --CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 --FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 --~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        ++...+.++.+||.+||..||++||++.++++||||++
T Consensus       303 ~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             HHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             HhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence              23456889999999999999999999999999999964

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=7.8e-34  Score=199.51  Aligned_cols=142  Identities=19%  Similarity=0.286  Sum_probs=110.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh---hcCCCCcchhHHHHHHHHHHH
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR---HGLLLIYHVDTWALGRVFVEM   79 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~---~~~~~~~~~DvwslG~~l~~~   79 (152)
                      .++++.+++.++.|++.||+|||++|++||||||+||+++.......++++|||..   .+..++.++|+||+||++|++
T Consensus       112 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~DiwslG~il~el  191 (299)
T 3m2w_A          112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYIL  191 (299)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCGGGGHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccccccCCchhhHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999987443467888998854   445578899999999999999


Q ss_pred             HhcCcccCCccCCCCCChHHHHHHHH--hcCCCCCCC----CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869           80 MTAEISAWGSFGRGLASRDDLLELIA--FSSEVPEFP----SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ++|..||.+...      ........  ........+    ..++.++.+++.+||..||++||++.++++||||++
T Consensus       192 ~tg~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          192 LCGYPPFYSNHG------LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  262 (299)
T ss_dssp             HHSSCSCCC-------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHCCCCCCCCcc------hhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence            999977765421      11100000  001111122    568999999999999999999999999999999965

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=2.6e-32  Score=202.90  Aligned_cols=142  Identities=22%  Similarity=0.356  Sum_probs=116.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++..++.++.||+.||+|||++|++||||||+||+++.......++++|||...                      
T Consensus       120 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  199 (484)
T 3nyv_A          120 RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV  199 (484)
T ss_dssp             CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCcee
Confidence            4678999999999999999999999999999999999999654444667777776221                      


Q ss_pred             -cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC--CCCChhHHHHHHHhhccccCCC
Q 039869           60 -GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        60 -~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ...++.++||||+||++|++++|..||.+.      +..++...+..+......+  ..+++++.+++.+||..+|++|
T Consensus       200 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  273 (484)
T 3nyv_A          200 LHGTYDEKCDVWSTGVILYILLSGCPPFNGA------NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMR  273 (484)
T ss_dssp             HHTCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGS
T ss_pred             ecCCCCCcceeHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHC
Confidence             113577899999999999999999777665      5666666666655444333  4689999999999999999999


Q ss_pred             cCHHHHhcCCCCC
Q 039869          137 WTAKHVLAHPFPS  149 (152)
Q Consensus       137 ~~~~~~l~h~~~~  149 (152)
                      ||+.++++||||+
T Consensus       274 ~s~~e~l~h~~~~  286 (484)
T 3nyv_A          274 ISARDALDHEWIQ  286 (484)
T ss_dssp             CCHHHHHTSHHHH
T ss_pred             cCHHHHhhChhhc
Confidence            9999999999986

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=2.8e-32  Score=195.80  Aligned_cols=141  Identities=22%  Similarity=0.277  Sum_probs=106.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC----------------------CCchhHHHHHHHH---
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG----------------------KDAHEAEISAFLQ---   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~----------------------~~~~~~~l~~~~~---   57 (152)
                      .++++.+++.++.||+.||+|||++||+||||||+||+++..                      .....++++|||.   
T Consensus       132 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~  211 (360)
T 3llt_A          132 NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF  211 (360)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCcee
Confidence            358999999999999999999999999999999999999742                      1125667777762   


Q ss_pred             -------------------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc-CCCC------
Q 039869           58 -------------------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS-SEVP------  111 (152)
Q Consensus        58 -------------------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------  111 (152)
                                         ..+..++.++||||+||++|++++|+.||.+.      ...+....+... ...+      
T Consensus       212 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~p~~~~~~  285 (360)
T 3llt_A          212 KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH------EHMEHLAMMESIIQPIPKNMLYE  285 (360)
T ss_dssp             TTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             cCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC------cHHHHHHHHHHhcCCCCHHHHhh
Confidence                               23445678999999999999999999777654      222222222111 1000      


Q ss_pred             -------------------------------------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCC
Q 039869          112 -------------------------------------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       112 -------------------------------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~  149 (152)
                                                           ..+...++.+.+++.+||..||++|||+.++++||||+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          286 ATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                                                 00111236778999999999999999999999999996

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.97  E-value=2e-32  Score=198.31  Aligned_cols=148  Identities=24%  Similarity=0.374  Sum_probs=107.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCC-----------------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKD-----------------------------------   46 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~-----------------------------------   46 (152)
                      +++++..++.++.||+.||+|||++ ||+||||||+||+++.++.                                   
T Consensus       141 ~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (397)
T 1wak_A          141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNF  220 (397)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccc
Confidence            5689999999999999999999998 9999999999999986531                                   


Q ss_pred             -----------chhHHHHHHHHh----------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCC
Q 039869           47 -----------AHEAEISAFLQR----------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRG   93 (152)
Q Consensus        47 -----------~~~~~l~~~~~~----------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~   93 (152)
                                 ...++++|||..                      .+..++.++|||||||++|+|++|+.||.+.....
T Consensus       221 ~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~  300 (397)
T 1wak_A          221 LVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEE  300 (397)
T ss_dssp             SCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSS
T ss_pred             cccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccc
Confidence                       114677777732                      23446788999999999999999997776543322


Q ss_pred             CCChHHHHHH-HHhcCCCC---------------------------------------CCCCCCChhHHHHHHHhhcccc
Q 039869           94 LASRDDLLEL-IAFSSEVP---------------------------------------EFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        94 ~~~~~~~~~~-~~~~~~~~---------------------------------------~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                      .......... .......+                                       ..+...+..+.+||.+||..||
T Consensus       301 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  380 (397)
T 1wak_A          301 YTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIP  380 (397)
T ss_dssp             SCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSG
T ss_pred             cCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccCh
Confidence            2112211111 11111000                                       1122334568899999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~  150 (152)
                      ++||++.++++||||++
T Consensus       381 ~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          381 EKRATAAECLRHPWLNS  397 (397)
T ss_dssp             GGSCCHHHHHTSGGGGC
T ss_pred             hhcCCHHHHhhCccccC
Confidence            99999999999999974

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=2.6e-32  Score=197.96  Aligned_cols=140  Identities=21%  Similarity=0.273  Sum_probs=104.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++||+.                         
T Consensus       123 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  199 (389)
T 3gni_B          123 DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD---GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL  199 (389)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---CCEEECCGGGCEECEETTEECSCBCCCCTTCTTTG
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEcccccceeeccccccccccccccccccccc
Confidence            568999999999999999999999999999999999999877   4556666642                         


Q ss_pred             -------hhc--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH-----------------------
Q 039869           58 -------RHG--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA-----------------------  105 (152)
Q Consensus        58 -------~~~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------  105 (152)
                             ..+  ..++.++||||+||++|++++|+.||.+....     ........                       
T Consensus       200 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (389)
T 3gni_B          200 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT-----QMLLEKLNGTVPCLLDTSTIPAEELTMSPSR  274 (389)
T ss_dssp             GGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST-----THHHHC-------------------------
T ss_pred             cccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHhcCCCCccccccccccccccccccc
Confidence                   122  34677899999999999999999777654221     11110000                       


Q ss_pred             --------------------hcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          106 --------------------FSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       106 --------------------~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                          ........+..+++++.+||.+||..||++||++.++++||||++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~  339 (389)
T 3gni_B          275 SVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  339 (389)
T ss_dssp             -------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred             cccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence                                000011234568899999999999999999999999999999975

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=8.2e-32  Score=207.08  Aligned_cols=138  Identities=21%  Similarity=0.272  Sum_probs=118.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ++|++..++.|+.||+.||+|||++||+||||||+|||++.+   +.++|+|||..                        
T Consensus       437 ~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~---g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~  513 (674)
T 3pfq_A          437 GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEI  513 (674)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSS---SCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCC---CcEEEeecceeeccccCCcccccccCCCcccCHhh
Confidence            568999999999999999999999999999999999999887   56788888732                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||||+++|||++|..||.+.      +..++...+...  ...+|..++.++.+||.+||..||++|+
T Consensus       514 l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~------~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~  585 (674)
T 3pfq_A          514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE------DEDELFQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPGKRL  585 (674)
T ss_dssp             HTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHSS--CCCCCTTSCHHHHHHHHHHSCSSSTTCT
T ss_pred             hcCCCCCccceEechHHHHHHHHcCCCCCCCC------CHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHccCCHHHCC
Confidence             2334578899999999999999999888765      556666666543  3456788999999999999999999999


Q ss_pred             CH-----HHHhcCCCCCCC
Q 039869          138 TA-----KHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~-----~~~l~h~~~~~~  151 (152)
                      ++     .++++||||+.-
T Consensus       586 ~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          586 GCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             TCSTTHHHHHHSSGGGSSC
T ss_pred             CCCCCcHHHHhcCccccCC
Confidence            97     899999999863

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=6.2e-32  Score=194.93  Aligned_cols=139  Identities=27%  Similarity=0.373  Sum_probs=109.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~   60 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                      .+
T Consensus       123 ~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~  199 (367)
T 1cm8_A          123 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED---CELKILDFGLARQADSEMTGYVVTRWYRAPEVILN  199 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCC---CCEEEEeeecccccccccCcCcCCCCcCCHHHHhC
Confidence            468999999999999999999999999999999999999877   56777777621                      12


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcC----------------------------CC
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSS----------------------------EV  110 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------------------------~~  110 (152)
                       ..++.++|+||+||++|++++|+.||.+.      +.......+ ....                            ..
T Consensus       200 ~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (367)
T 1cm8_A          200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGS------DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF  273 (367)
T ss_dssp             TTCCCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG
T ss_pred             CCCCChhhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCH
Confidence             44678899999999999999999777665      222222111 1000                            00


Q ss_pred             CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .......++.+.+++.+||..||++|||+.++++||||++
T Consensus       274 ~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~  313 (367)
T 1cm8_A          274 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  313 (367)
T ss_dssp             GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence            1233567899999999999999999999999999999985

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.8e-32  Score=196.88  Aligned_cols=141  Identities=26%  Similarity=0.404  Sum_probs=109.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeee-cCCCchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV-AGKDAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~-~~~~~~~~~l~~~~~~----------------------   58 (152)
                      ++++++..++.++.||+.||+|||++|++||||||+||+++ .+   +.++++|||..                      
T Consensus       135 ~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE  211 (383)
T 3eb0_A          135 GRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD---NTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPE  211 (383)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTT---TEEEECCCTTCEECCTTSCCCCCCCCSSCCCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCC---CcEEEEECCCCcccCCCCCCcCcccCCCccCHH
Confidence            46799999999999999999999999999999999999997 34   56778887722                      


Q ss_pred             --hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC-----------------C-------
Q 039869           59 --HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV-----------------P-------  111 (152)
Q Consensus        59 --~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-------  111 (152)
                        .+ ..++.++|+||+||++|++++|+.||.+..     ..+.+...+.....+                 +       
T Consensus       212 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  286 (383)
T 3eb0_A          212 LMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET-----SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDW  286 (383)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCH
T ss_pred             HhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccH
Confidence              22 235778999999999999999997776652     222222222110000                 0       


Q ss_pred             --CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 --EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 --~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        .++..++.++.+++.+||..||++|||+.++++||||++
T Consensus       287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          287 RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             HhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence              134568889999999999999999999999999999963

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=5.6e-32  Score=196.13  Aligned_cols=142  Identities=20%  Similarity=0.289  Sum_probs=115.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++.+++..++.++.||+.||.|||++||+||||||+||+++.+   +.++++|||...                      
T Consensus       109 ~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~  185 (384)
T 4fr4_A          109 NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEH---GHVHITDFNIAAMLPRETQITTMAGTKPYMAPEM  185 (384)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCC---CCEEEeccceeeeccCCCceeccCCCccccCCee
Confidence            4579999999999999999999999999999999999999887   567788877221                      


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                           +..++.++|+||+||++|+|++|..||.....   .....+......  .....|..++.++.++|.+||..||+
T Consensus       186 ~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~---~~~~~~~~~~~~--~~~~~p~~~s~~~~~li~~lL~~dP~  260 (384)
T 4fr4_A          186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS---TSSKEIVHTFET--TVVTYPSAWSQEMVSLLKKLLEPNPD  260 (384)
T ss_dssp             TCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT---SCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred             eccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC---ccHHHHHHHHhh--cccCCCCcCCHHHHHHHHHHhcCCHh
Confidence                 22356789999999999999999988765421   133344443332  33456788999999999999999999


Q ss_pred             CCcC-HHHHhcCCCCCCC
Q 039869          135 LRWT-AKHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~~-~~~~l~h~~~~~~  151 (152)
                      +||+ +.+++.||||++-
T Consensus       261 ~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          261 QRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             GSCCSHHHHHTSGGGTTC
T ss_pred             HhcccHHHHHcChhhhcC
Confidence            9998 8999999999863

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=1.4e-31  Score=190.30  Aligned_cols=137  Identities=25%  Similarity=0.342  Sum_probs=112.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +.+++..++.++.||+.||.|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       116 ~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  192 (327)
T 3a62_A          116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI  192 (327)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTT---SCEEECCCSCC----------CTTSSCCTTSCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCC---CcEEEEeCCcccccccCCccccccCCCcCccCHhh
Confidence            468899999999999999999999999999999999999877   4566666651                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+|+++|++++|..||.+.      +.......+...  ...++..++.++.+++.+||..||++||
T Consensus       193 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dp~~R~  264 (327)
T 3a62_A          193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE------NRKKTIDKILKC--KLNLPPYLTQEARDLLKKLLKRNAASRL  264 (327)
T ss_dssp             HTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHSCSCGGGST
T ss_pred             CcCCCCCCcccchhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHHhcCHhhcc
Confidence            12333567899999999999999999777665      444554444433  3356678999999999999999999999


Q ss_pred             -----CHHHHhcCCCCCC
Q 039869          138 -----TAKHVLAHPFPSV  150 (152)
Q Consensus       138 -----~~~~~l~h~~~~~  150 (152)
                           ++.++++||||+.
T Consensus       265 ~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          265 GAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             TSSTTTHHHHHHSGGGSS
T ss_pred             CCCCCCHHHHHcCCcccC
Confidence                 7889999999985

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=4.9e-32  Score=196.86  Aligned_cols=139  Identities=26%  Similarity=0.378  Sum_probs=110.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.||+.||.|||++||+||||||+||+++.    +.++++|||..                        
T Consensus       150 ~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP  225 (390)
T 2zmd_A          150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP  225 (390)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS----SCEEECCCSSSCCC---------CCSCCCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC----CeEEEEecCccccccCCCccccCCCCCcCCCccCh
Confidence            46889999999999999999999999999999999999953    34667776521                        


Q ss_pred             ---hc-----------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHH
Q 039869           59 ---HG-----------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        59 ---~~-----------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (152)
                         .+           ..++.++|||||||++|++++|..||....     ........+.........+...+.++.++
T Consensus       226 E~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  300 (390)
T 2zmd_A          226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNHEIEFPDIPEKDLQDV  300 (390)
T ss_dssp             HHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTSCCCCCCCSCHHHHHH
T ss_pred             HHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCccccCCCCccchHHHHHH
Confidence               11           235668999999999999999997776542     33334444443444455677788999999


Q ss_pred             HHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          125 LSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      +.+||..||++||++.++++||||+.
T Consensus       301 i~~~L~~dP~~Rps~~ell~hp~~~~  326 (390)
T 2zmd_A          301 LKCCLKRDPKQRISIPELLAHPYVQI  326 (390)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHHcccChhhCCCHHHHhhCcCccc
Confidence            99999999999999999999999964

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=8.7e-32  Score=190.06  Aligned_cols=148  Identities=24%  Similarity=0.328  Sum_probs=111.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh--------------------c--
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH--------------------G--   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~--------------------~--   60 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.++....++++||+...                    |  
T Consensus       106 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  185 (316)
T 2ac3_A          106 RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA  185 (316)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCc
Confidence            468999999999999999999999999999999999999876554446676665211                    0  


Q ss_pred             ---------------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCC---------hHHHHHHHHhcCCCCC--CC
Q 039869           61 ---------------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS---------RDDLLELIAFSSEVPE--FP  114 (152)
Q Consensus        61 ---------------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~  114 (152)
                                     ..++.++||||+||++|++++|..||.+....+...         ...+...+.......+  ..
T Consensus       186 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  265 (316)
T 2ac3_A          186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDW  265 (316)
T ss_dssp             GGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHH
T ss_pred             CccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhc
Confidence                           224568999999999999999998876653221100         1223333333322111  11


Q ss_pred             CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          115 SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       115 ~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ..++.++.+++.+||..||++||++.++++||||++
T Consensus       266 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  301 (316)
T 2ac3_A          266 AHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG  301 (316)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred             ccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence            458899999999999999999999999999999986

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=8.8e-33  Score=197.17  Aligned_cols=146  Identities=18%  Similarity=0.271  Sum_probs=106.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------H   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------~   59 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+.....++++|||..                       .
T Consensus       123 ~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~  202 (336)
T 3fhr_A          123 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLG  202 (336)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhC
Confidence            46999999999999999999999999999999999999987654455777777622                       1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      +..++.++|+||+|+++|++++|..||.+........  .....+..  ..........++.++.+++.+||..||++||
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  280 (336)
T 3fhr_A          203 PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL  280 (336)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCc
Confidence            2233567999999999999999997776553211101  11111111  1122233357899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||++
T Consensus       281 t~~ell~hp~~~~  293 (336)
T 3fhr_A          281 TITQFMNHPWINQ  293 (336)
T ss_dssp             CHHHHHHSHHHHT
T ss_pred             CHHHHhcCccccc
Confidence            9999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.97  E-value=1.6e-31  Score=187.55  Aligned_cols=141  Identities=28%  Similarity=0.383  Sum_probs=111.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||.|||++|++|+||||+||+++.++   .++++|||..                       
T Consensus       111 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  187 (302)
T 2j7t_A          111 DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG---DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE  187 (302)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS---CEEECCCHHHHHHHHHHHC-----CCGGGCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCC---CEEEEECCCCccccccccccccccCChhhcCCe
Confidence            35689999999999999999999999999999999999998773   4555555411                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-CCCCCCCCChhHHHHHHHhhc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-VPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~  130 (152)
                             .+..++.++|+||+|+++|++++|..|+...      +............. ....+..++.++.+++.+||.
T Consensus       188 ~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  261 (302)
T 2j7t_A          188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL------NPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALD  261 (302)
T ss_dssp             HHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSC
T ss_pred             eeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC------CHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcc
Confidence                   2344567899999999999999999766554      44444433333322 223456789999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .||++||++.++++||||+.-
T Consensus       262 ~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          262 KNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             SCTTTSCCHHHHTTSTTTTTC
T ss_pred             cChhhCCCHHHHhcChHHhhh
Confidence            999999999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=1e-31  Score=186.90  Aligned_cols=139  Identities=22%  Similarity=0.214  Sum_probs=106.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC----------------CchhHHHHHHHHhh-------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK----------------DAHEAEISAFLQRH-------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~----------------~~~~~~l~~~~~~~-------   59 (152)
                      +++++.+++.++.||+.||+|||++|++||||||+||+++.++                ....++++||+...       
T Consensus       110 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  189 (289)
T 1x8b_A          110 SYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV  189 (289)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccc
Confidence            5689999999999999999999999999999999999998553                22356777776211       


Q ss_pred             ---------------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHH
Q 039869           60 ---------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        60 ---------------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (152)
                                     +..++.++||||+|+++|++++|..++...        . ....+. ....+..+..++.++.++
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~-~~~~~~-~~~~~~~~~~~~~~~~~l  259 (289)
T 1x8b_A          190 EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--------D-QWHEIR-QGRLPRIPQVLSQEFTEL  259 (289)
T ss_dssp             CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS--------H-HHHHHH-TTCCCCCSSCCCHHHHHH
T ss_pred             cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch--------h-HHHHHH-cCCCCCCCcccCHHHHHH
Confidence                           113346899999999999999998544322        1 122222 233456778899999999


Q ss_pred             HHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          125 LSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      +.+||..||++||++.++++||||++.
T Consensus       260 i~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          260 LKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             HHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            999999999999999999999999863

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=7.4e-32  Score=193.12  Aligned_cols=140  Identities=25%  Similarity=0.298  Sum_probs=108.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       119 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~  195 (351)
T 3mi9_A          119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR  195 (351)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC---CCEEEccchhcccccccccccccccCCcccccCcc
Confidence            568999999999999999999999999999999999999877   56677777622                        


Q ss_pred             -----hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCCCCCCCCC--------------
Q 039869           59 -----HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSEVPEFPSN--------------  116 (152)
Q Consensus        59 -----~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------  116 (152)
                           .+ ..++.++||||+||++|++++|..||.+.      ........+..  +...+.....              
T Consensus       196 aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (351)
T 3mi9_A          196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN------TEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK  269 (351)
T ss_dssp             CHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCS
T ss_pred             CchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCChhhccccccchhhccccccc
Confidence                 11 23477899999999999999999777654      33333322211  1111211111              


Q ss_pred             --------------CChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          117 --------------ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       117 --------------~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                    .++.+.+++.+||..||++||++.++++||||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          270 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             SCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             ccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence                          26678999999999999999999999999999753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=3e-32  Score=201.89  Aligned_cols=139  Identities=24%  Similarity=0.401  Sum_probs=105.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~~   58 (152)
                      ..+++..++.++.|++.||+|||++||+||||||+||+++.+   +.++++|||                        ..
T Consensus       159 ~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  235 (464)
T 3ttj_A          159 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI  235 (464)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEECCCCCC-----CCCC----CCCTTCCHHHH
T ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCC---CCEEEEEEEeeeecCCCcccCCCcccccccCHHHH
Confidence            358899999999999999999999999999999999999877   556777776                        22


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-Hh-cCC------------------CCCC-----
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AF-SSE------------------VPEF-----  113 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~------------------~~~~-----  113 (152)
                      .+..++.++||||+||++|+|++|+.||.+.      +..+....+ .. +..                  .+..     
T Consensus       236 ~~~~~~~~~DiwSlG~il~ell~g~~pF~g~------~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (464)
T 3ttj_A          236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGR------DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  309 (464)
T ss_dssp             TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCCh
Confidence            3345678899999999999999999888665      222222211 11 000                  0000     


Q ss_pred             ----CCC-----------CChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          114 ----PSN-----------ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       114 ----~~~-----------~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                          +..           .+.++.+||.+||..||++|||+.++++||||+.
T Consensus       310 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          310 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence                000           1456899999999999999999999999999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=8.4e-32  Score=194.28  Aligned_cols=139  Identities=26%  Similarity=0.353  Sum_probs=106.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~   60 (152)
                      +++++..++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                      .+
T Consensus       127 ~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~  203 (367)
T 2fst_X          127 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADEMTGYVATRWYRAPEIMLN  203 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECC---------------CCCTTCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCC---CCEEEeeccccccccccCCCcCcCcCccChHHHcC
Confidence            568999999999999999999999999999999999999877   55677777621                      12


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--c----------------------CCCCC---
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--S----------------------SEVPE---  112 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------------~~~~~---  112 (152)
                       ..++.++||||+||++|++++|+.||.+.      +.......+..  +                      ...+.   
T Consensus       204 ~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (367)
T 2fst_X          204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT------DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF  277 (367)
T ss_dssp             CCSCCTTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCH
T ss_pred             CcCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCH
Confidence             34577899999999999999999777665      22222221110  0                      00010   


Q ss_pred             --CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 --FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 --~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        .....++.+.+||.+||..||++||++.++++||||++
T Consensus       278 ~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~  317 (367)
T 2fst_X          278 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  317 (367)
T ss_dssp             HHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhh
Confidence              12356788999999999999999999999999999985

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=2.2e-32  Score=195.21  Aligned_cols=137  Identities=24%  Similarity=0.352  Sum_probs=110.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++.+++.++.|++.||.|||++|++||||||+||+++.+   +.++++|||...                       
T Consensus       103 ~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~---~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~  179 (336)
T 3h4j_B          103 KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN---LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI  179 (336)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTT---CCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCC---CCEEEEEeccceeccCCcccccccCCcCcCCHHHH
Confidence            568999999999999999999999999999999999999877   567778877221                       


Q ss_pred             -cCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 -GLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 -~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       +..+ +.++|+||+|+++|++++|..||.+.......      ..+  .......|..+++++.+++.+||..||.+||
T Consensus       180 ~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~------~~i--~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rp  251 (336)
T 3h4j_B          180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF------KKV--NSCVYVMPDFLSPGAQSLIRRMIVADPMQRI  251 (336)
T ss_dssp             CCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB------CCC--CSSCCCCCTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             cCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH------HHH--HcCCCCCcccCCHHHHHHHHHHcCCChhHCc
Confidence             1112 46799999999999999999888665322111      111  1223345677899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      |+.++++||||+.
T Consensus       252 t~~eil~hp~~~~  264 (336)
T 3h4j_B          252 TIQEIRRDPWFNV  264 (336)
T ss_dssp             CHHHHTTCHHHHT
T ss_pred             CHHHHHhChhhcc
Confidence            9999999999975

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=7.1e-32  Score=194.23  Aligned_cols=145  Identities=17%  Similarity=0.148  Sum_probs=108.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.++. ..++++|||.                        .
T Consensus       111 ~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  189 (361)
T 3uc3_A          111 GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL  189 (361)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSS-CCEEECCCCCC---------------CTTSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC-ceEEEeecCccccccccCCCCCCcCCCCcCChhhh
Confidence            56899999999999999999999999999999999999975522 1256666651                        1


Q ss_pred             hcCCCCc-chhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIY-HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~-~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..++. ++|+||+||++|++++|+.||.+....  .........+.......+....++.++.++|.+||..||++||
T Consensus       190 ~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp  267 (361)
T 3uc3_A          190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP--RDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRI  267 (361)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C--CCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSC
T ss_pred             cCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCc
Confidence            2222333 389999999999999999777654321  1233344444333333333446899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||..
T Consensus       268 s~~ell~hp~f~~  280 (361)
T 3uc3_A          268 SIPEIKTHSWFLK  280 (361)
T ss_dssp             CHHHHHTSHHHHT
T ss_pred             CHHHHHhCcchhc
Confidence            9999999999943

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=4.6e-32  Score=198.04  Aligned_cols=140  Identities=21%  Similarity=0.280  Sum_probs=113.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       163 ~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~---g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE  239 (410)
T 3v8s_A          163 YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE  239 (410)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCC---CCEEEeccceeEeeccCCcccccCCcCCccccCHH
Confidence            468999999999999999999999999999999999999887   56777887732                        


Q ss_pred             --hcCC----CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC--CCCCCCCCCChhHHHHHHHhhc
Q 039869           59 --HGLL----LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS--EVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 --~~~~----~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                        .+..    ++.++|+||+||++|+|++|..||.+.      +.......+....  ...+....++.++.++|.+||.
T Consensus       240 ~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~  313 (410)
T 3v8s_A          240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT  313 (410)
T ss_dssp             HHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSS
T ss_pred             HhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC------ChhhHHHHHHhccccccCCCcccccHHHHHHHHHHcc
Confidence              1111    456899999999999999999888765      5555555543322  1222335689999999999999


Q ss_pred             cccCC--CcCHHHHhcCCCCCCC
Q 039869          131 RVHQL--RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~--R~~~~~~l~h~~~~~~  151 (152)
                      .+|.+  |+++.++++||||++.
T Consensus       314 ~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          314 DREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             CGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             ChhhhCCCCCHHHHhcCccccCC
Confidence            99988  9999999999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=4.9e-32  Score=201.64  Aligned_cols=142  Identities=25%  Similarity=0.430  Sum_probs=117.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++.+++.++.||+.||.|||++||+||||||+||+++.......++++|||...                       
T Consensus       116 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  195 (486)
T 3mwu_A          116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL  195 (486)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHh
Confidence            568999999999999999999999999999999999999765554667888877221                       


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC--CCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ...++.++||||+||++|++++|..||.+.      ...++...+..+......+  ..+++++.++|.+||..||++||
T Consensus       196 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~  269 (486)
T 3mwu_A          196 RGTYDEKCDVWSAGVILYILLSGTPPFYGK------NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI  269 (486)
T ss_dssp             GSCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSC
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCc
Confidence            112467899999999999999999887765      5566666666555443333  46899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      |+.++++||||+.
T Consensus       270 t~~~~l~hp~~~~  282 (486)
T 3mwu_A          270 TATQCLEHPWIQK  282 (486)
T ss_dssp             CHHHHHHCHHHHH
T ss_pred             CHHHHhcCHhhcc
Confidence            9999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=4.8e-32  Score=193.92  Aligned_cols=146  Identities=23%  Similarity=0.282  Sum_probs=115.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec-CCCchhHHHHHHHHhh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH---------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~~---------------------   59 (152)
                      ++.+++.+++.++.||+.||+|||++|++||||||+||++.. ++....++++|||...                     
T Consensus       110 ~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  189 (342)
T 2qr7_A          110 QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAP  189 (342)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCH
Confidence            456899999999999999999999999999999999999853 3344567888888332                     


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhcccc
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          +..++.++|+||+||++|++++|..||.+...   ....++...+..+....  ..+..++.++.+++.+||..||
T Consensus       190 E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  266 (342)
T 2qr7_A          190 EVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD---DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDP  266 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT---SCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSST
T ss_pred             HHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc---CCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCCh
Confidence                11135679999999999999999977765321   24555666655444332  2346789999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~  150 (152)
                      ++||++.++++||||.+
T Consensus       267 ~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          267 HQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TTSCCHHHHTTSHHHHT
T ss_pred             hHCcCHHHHhcCCeecC
Confidence            99999999999999854

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=2.7e-32  Score=199.84  Aligned_cols=145  Identities=22%  Similarity=0.334  Sum_probs=112.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.+.....++++|||...                      
T Consensus       233 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~  312 (419)
T 3i6u_A          233 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV  312 (419)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCcee
Confidence            4678999999999999999999999999999999999999766544557777776221                      


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC--CCCCCCCCChhHHHHHHHhhccc
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE--VPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                           ...++.++|+||+||++|++++|..||....     ....+...+.....  .+..+..++..+.+++.+||..|
T Consensus       313 ~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  387 (419)
T 3i6u_A          313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD  387 (419)
T ss_dssp             TC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS-----SSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             eecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc-----chHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCC
Confidence                 1233568999999999999999997775532     22223333332222  12223568999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~~  151 (152)
                      |++||++.++++||||++.
T Consensus       388 P~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          388 PKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             TTTSCCHHHHHHSGGGCCH
T ss_pred             hhHCcCHHHHhCCcccCCh
Confidence            9999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=7.7e-32  Score=187.47  Aligned_cols=137  Identities=24%  Similarity=0.364  Sum_probs=112.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hhh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QRH   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~~   59 (152)
                      +++++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++|||                       ...
T Consensus       104 ~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (279)
T 3fdn_A          104 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIE  180 (279)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTT---SCEEECSCCEESCC--------CCCCTTCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCC---CCEEEEeccccccCCcccccccCCCCCccCHhHhc
Confidence            468899999999999999999999999999999999999877   456666665                       223


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      +..++.++|+||+|+++|++++|..||...      ........+...  ....+..++.++.+++.+||..||++||++
T Consensus       181 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  252 (279)
T 3fdn_A          181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN------TYQETYKRISRV--EFTFPDFVTEGARDLISRLLKHNPSQRPML  252 (279)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             cCCCCccchhHhHHHHHHHHHHCCCCCCCC------cHHHHHHHHHhC--CCCCCCcCCHHHHHHHHHHhccChhhCCCH
Confidence            344567899999999999999999777554      444454444332  334567799999999999999999999999


Q ss_pred             HHHhcCCCCCC
Q 039869          140 KHVLAHPFPSV  150 (152)
Q Consensus       140 ~~~l~h~~~~~  150 (152)
                      .++++||||+.
T Consensus       253 ~e~l~h~~~~~  263 (279)
T 3fdn_A          253 REVLEHPWITA  263 (279)
T ss_dssp             HHHHHCHHHHH
T ss_pred             HHHhhCccccC
Confidence            99999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=1.7e-31  Score=193.02  Aligned_cols=138  Identities=22%  Similarity=0.279  Sum_probs=114.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       134 ~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~---g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  210 (373)
T 2r5t_A          134 RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ---GHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV  210 (373)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC---CCEEEeeCccccccccCCCccccccCCccccCHHH
Confidence            468999999999999999999999999999999999999877   56777777622                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+|||||++|+|++|..||.+.      +..+....+...  ...++..++.++.++|.+||..||++||
T Consensus       211 ~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~lL~~dp~~R~  282 (373)
T 2r5t_A          211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------NTAEMYDNILNK--PLQLKPNITNSARHLLEGLLQKDRTKRL  282 (373)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS------BHHHHHHHHHHS--CCCCCSSSCHHHHHHHHHHTCSSGGGST
T ss_pred             hCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHcccCHHhCC
Confidence             2333567899999999999999999887665      555555555433  2345678999999999999999999999


Q ss_pred             CH----HHHhcCCCCCCC
Q 039869          138 TA----KHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~----~~~l~h~~~~~~  151 (152)
                      ++    .+++.||||+.-
T Consensus       283 ~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          283 GAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             TTTTTHHHHHTSGGGTTC
T ss_pred             CCCCCHHHHhCCccccCC
Confidence            86    689999999863

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=4.7e-32  Score=199.37  Aligned_cols=141  Identities=22%  Similarity=0.286  Sum_probs=114.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++..++.++.|++.||+|||++||+||||||+|||++.+   +.++++|||..                       
T Consensus       169 ~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~---g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~AP  245 (437)
T 4aw2_A          169 EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP  245 (437)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSCEECCSCCSCGGGCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCC---CCEEEcchhhhhhcccCCCcccccccCCcCeeCh
Confidence            3579999999999999999999999999999999999999887   56777887722                       


Q ss_pred             ---h-----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc---CCCCCCCCCCChhHHHHHHH
Q 039869           59 ---H-----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS---SEVPEFPSNISEDGRDFLSK  127 (152)
Q Consensus        59 ---~-----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~  127 (152)
                         .     +..++.++|+||+||++|||++|+.||.+.      +..+....+...   ...+.....+++++.+||.+
T Consensus       246 E~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~------~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~  319 (437)
T 4aw2_A          246 EILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE------SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRR  319 (437)
T ss_dssp             HHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHT
T ss_pred             HHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC------ChhHHHHhhhhccccccCCcccccCCHHHHHHHHH
Confidence               0     223567899999999999999999888765      445554444322   22233345689999999999


Q ss_pred             hhccccCC--CcCHHHHhcCCCCCCC
Q 039869          128 CFIRVHQL--RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       128 ~l~~~p~~--R~~~~~~l~h~~~~~~  151 (152)
                      ||..+|++  |+++.++++||||++-
T Consensus       320 lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          320 LICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             TSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             HhcccccccCCCCHHHHhCCCccCCC
Confidence            99988888  9999999999999863

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=1.9e-31  Score=190.32  Aligned_cols=133  Identities=14%  Similarity=0.184  Sum_probs=109.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       124 ~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  200 (335)
T 3dls_A          124 HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED---FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV  200 (335)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECCTTCCBCEECSCGGGCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCC---CcEEEeecccceECCCCCceeccCCCccccChhh
Confidence            3578999999999999999999999999999999999999877   56777777622                       


Q ss_pred             -hcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..+ +.++|+||+|+++|++++|..||.....              ........+..++.++.+++.+||..||++|
T Consensus       201 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  266 (335)
T 3dls_A          201 LMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAAIHPPYLVSKELMSLVSGLLQPVPERR  266 (335)
T ss_dssp             HTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTCCCCSSCCCHHHHHHHHHHTCSSGGGS
T ss_pred             hcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhccCCCcccCHHHHHHHHHHccCChhhC
Confidence             12222 5678999999999999999977754321              1122234456689999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      |++.++++||||++.
T Consensus       267 ps~~ell~hp~~~~~  281 (335)
T 3dls_A          267 TTLEKLVTDPWVTQP  281 (335)
T ss_dssp             CCHHHHHHCTTTTCC
T ss_pred             cCHHHHhcCccccCC
Confidence            999999999999763

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=3.8e-31  Score=189.64  Aligned_cols=139  Identities=27%  Similarity=0.343  Sum_probs=109.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~   60 (152)
                      .++++.+++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                      .+
T Consensus       121 ~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~  197 (353)
T 3coi_A          121 LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED---CELKILDFGLARHADAEMTGYVVTRWYRAPEVILS  197 (353)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT---CCEEECSTTCTTC--------CCSBCCSCHHHHSC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCC---CcEEEeecccccCCCCCccccccCcCcCCHHHHhC
Confidence            468999999999999999999999999999999999999877   45667777621                      12


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-----------------------------cCCC
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-----------------------------SSEV  110 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~  110 (152)
                       ..++.++|+||+|+++|++++|..||.+.      +.......+..                             ....
T Consensus       198 ~~~~~~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (353)
T 3coi_A          198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGK------DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF  271 (353)
T ss_dssp             CSCCCTTHHHHHHHHHHHHHHHSSCSSBSS------CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCT
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccH
Confidence             34577899999999999999999777654      22222211110                             0011


Q ss_pred             CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ...+..++.++.+++.+||..||++||++.++++||||+.
T Consensus       272 ~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  311 (353)
T 3coi_A          272 TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  311 (353)
T ss_dssp             TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            2234567899999999999999999999999999999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=7.8e-32  Score=194.03  Aligned_cols=140  Identities=24%  Similarity=0.350  Sum_probs=107.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       123 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  199 (364)
T 3qyz_A          123 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA  199 (364)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCC---CCEEEEeCcceEecCCCCCccccccccccccCCCC
Confidence            468999999999999999999999999999999999999877   45666776621                        


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-----------------------CC
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-----------------------EV  110 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~  110 (152)
                           .+..++.++|+||+||++|++++|+.||.+..     ....+........                       ..
T Consensus       200 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (364)
T 3qyz_A          200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH-----YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK  274 (364)
T ss_dssp             HHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS-----GGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred             CHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCc
Confidence                 22335778999999999999999997776542     1111111111000                       00


Q ss_pred             C-----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 P-----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ~-----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .     .....++.++.+++.+||..||++||++.++++||||++
T Consensus       275 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          275 NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             CCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             cCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence            0     112457889999999999999999999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=8.9e-32  Score=200.61  Aligned_cols=142  Identities=20%  Similarity=0.302  Sum_probs=117.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..++.++.||+.||+|||++|++||||||+||+++.......++++|||...                       
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l  210 (494)
T 3lij_A          131 MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL  210 (494)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHH
Confidence            468999999999999999999999999999999999999876555667888887321                       


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ...++.++||||+||++|++++|..||.+.      ...++...+.........  ...++.++.+++.+||..||++||
T Consensus       211 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~  284 (494)
T 3lij_A          211 RKKYDEKCDVWSIGVILFILLAGYPPFGGQ------TDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRI  284 (494)
T ss_dssp             TTCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             cccCCCchhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCc
Confidence            123467899999999999999999777665      556666666655543332  356899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      |+.++++||||++
T Consensus       285 s~~e~l~hp~~~~  297 (494)
T 3lij_A          285 SAQQALEHPWIKE  297 (494)
T ss_dssp             CHHHHHTCHHHHH
T ss_pred             cHHHHhcCccccc
Confidence            9999999999863

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=1.8e-31  Score=185.10  Aligned_cols=142  Identities=20%  Similarity=0.214  Sum_probs=109.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      +.++++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+...                      
T Consensus        99 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  175 (276)
T 2yex_A           99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA  175 (276)
T ss_dssp             TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECEETTEECCBCCCCSCGGGCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccC---CCEEEeeCCCccccCCCcchhcccCCccccCccC
Confidence            3468999999999999999999999999999999999999877   456777776321                      


Q ss_pred             -----cCC-CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           60 -----GLL-LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        60 -----~~~-~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                           +.. .+.++|+||+|+++|++++|..||....     .....................++..+.+++.+||..||
T Consensus       176 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  250 (276)
T 2yex_A          176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS-----DSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENP  250 (276)
T ss_dssp             GGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC-----TTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             hHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCc
Confidence                 111 2457999999999999999997776543     21122222222222222335689999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~~  151 (152)
                      ++||++.++++||||++.
T Consensus       251 ~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          251 SARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             TTSCCHHHHTTCTTTTCC
T ss_pred             hhCCCHHHHhcCccccCh
Confidence            999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=1.9e-31  Score=194.38  Aligned_cols=148  Identities=19%  Similarity=0.260  Sum_probs=105.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC-CCchhHHHHHHHHh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-KDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~-~~~~~~~l~~~~~~------------------------   58 (152)
                      ++++..++.++.||+.||+|||++||+||||||+||++... ...+.++++|||..                        
T Consensus       124 ~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  203 (405)
T 3rgf_A          124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  203 (405)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccC
Confidence            48999999999999999999999999999999999999432 22256677777621                        


Q ss_pred             ----hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCC----CCCChHHHHHHHHhcCCCCC-----------------
Q 039869           59 ----HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGR----GLASRDDLLELIAFSSEVPE-----------------  112 (152)
Q Consensus        59 ----~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----------------  112 (152)
                          .+ ..++.++||||+||++|+|++|..||.+....    .......+.........+..                 
T Consensus       204 PE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~  283 (405)
T 3rgf_A          204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK  283 (405)
T ss_dssp             HHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHH
T ss_pred             chhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhh
Confidence                12 23577899999999999999999777654321    00111222222111111110                 


Q ss_pred             ------------------CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 ------------------FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 ------------------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                        .....+..+.+||.+||..||++|||+.++++||||+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          284 DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             HCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             hccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence                              011236788999999999999999999999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.3e-31  Score=191.68  Aligned_cols=139  Identities=26%  Similarity=0.292  Sum_probs=107.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||...                       
T Consensus       107 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~  183 (346)
T 1ua2_A          107 LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN---GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL  183 (346)
T ss_dssp             SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCC---CCEEEEecccceeccCCcccCCcccccccccCchH
Confidence            468899999999999999999999999999999999999877   567777777321                       


Q ss_pred             --c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-Hh-cCCCCC----------------------
Q 039869           60 --G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AF-SSEVPE----------------------  112 (152)
Q Consensus        60 --~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~----------------------  112 (152)
                        + ..++.++|+||+||++|++++|..|+.+.      ........+ .. +.....                      
T Consensus       184 ~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (346)
T 1ua2_A          184 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGD------SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL  257 (346)
T ss_dssp             HTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCH
T ss_pred             hhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCCh
Confidence              1 22466799999999999999999666554      333332222 11 111000                      


Q ss_pred             --CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 --FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 --~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        ....++.++.++|.+||..||++|||+.++++||||++
T Consensus       258 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~  297 (346)
T 1ua2_A          258 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN  297 (346)
T ss_dssp             HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence              01456788999999999999999999999999999975

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=1.5e-31  Score=197.70  Aligned_cols=147  Identities=24%  Similarity=0.297  Sum_probs=103.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||..                       
T Consensus       150 ~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~  226 (458)
T 3rp9_A          150 PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD---CSVKVCDFGLARTVDYPENGNSQLPISPREDDMN  226 (458)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---CCEEECCCTTCBCTTSCTTCCCCCC---------
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCC---CCEeecccccchhccCccccccccccCccccccc
Confidence            4569999999999999999999999999999999999999877   45566666522                       


Q ss_pred             ------------------------------hcCCCCcchhHHHHHHHHHHHHh-----------cCcccCCccCCCCCC-
Q 039869           59 ------------------------------HGLLLIYHVDTWALGRVFVEMMT-----------AEISAWGSFGRGLAS-   96 (152)
Q Consensus        59 ------------------------------~~~~~~~~~DvwslG~~l~~~~~-----------~~~~~~~~~~~~~~~-   96 (152)
                                                    .+..++.++||||+||++|||++           ++++|.+........ 
T Consensus       227 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~  306 (458)
T 3rp9_A          227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPD  306 (458)
T ss_dssp             ------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC----------
T ss_pred             cccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccccc
Confidence                                          22335778999999999999998           454443321100000 


Q ss_pred             --------------hHHHHHHHHh-cC-------------------C--------CCCCCCCCChhHHHHHHHhhccccC
Q 039869           97 --------------RDDLLELIAF-SS-------------------E--------VPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        97 --------------~~~~~~~~~~-~~-------------------~--------~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                                    ...+...... +.                   .        ........+.++.+||.+||..||+
T Consensus       307 ~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~  386 (458)
T 3rp9_A          307 QKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPN  386 (458)
T ss_dssp             ----------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTT
T ss_pred             ccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCcc
Confidence                          0000000000 00                   0        0011245688999999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 039869          135 LRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~~~  151 (152)
                      +|||+.++++||||++.
T Consensus       387 ~R~t~~e~L~Hp~f~~~  403 (458)
T 3rp9_A          387 KRITINECLAHPFFKEV  403 (458)
T ss_dssp             TSCCHHHHHHSGGGTTT
T ss_pred             ccCCHHHHhcCHhhhhc
Confidence            99999999999999863

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=3e-31  Score=187.92  Aligned_cols=140  Identities=31%  Similarity=0.449  Sum_probs=109.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      ..+++..++.++.|++.||.|||++|++|+||||+||+++.+   +.++++|||.                        .
T Consensus       115 ~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  191 (326)
T 1blx_A          115 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL  191 (326)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCC---CCEEEecCcccccccCCCCccccccccceeCHHHH
Confidence            358999999999999999999999999999999999999877   4566777652                        2


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH-hcCC------------------------CCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA-FSSE------------------------VPEF  113 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------------~~~~  113 (152)
                      .+..++.++|+||+|+++|++++|+.||.+.      ........+. ....                        ....
T Consensus       192 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (326)
T 1blx_A          192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGS------SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF  265 (326)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGT
T ss_pred             hcCCCCcchhHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhc
Confidence            2334577899999999999999999777654      3232222221 1000                        0123


Q ss_pred             CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          114 PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       114 ~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ...++..+.+++.+||..||++||++.++++||||++-
T Consensus       266 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  303 (326)
T 1blx_A          266 VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  303 (326)
T ss_dssp             CCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence            35688899999999999999999999999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=1.9e-31  Score=192.56  Aligned_cols=139  Identities=28%  Similarity=0.362  Sum_probs=108.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~~   60 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                      ..+
T Consensus       139 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          139 MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED---CELKILDFGLARHADAEMTGYVVTRWYRAPEVILS  215 (371)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECSTTCC--------CTTCCCTTSCHHHHSC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCC---CCEEEEecCcccccccCcCCcccCccccCHHHhcC
Confidence            458999999999999999999999999999999999999877   5566777761                      122


Q ss_pred             -CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCC-----------------------CC----
Q 039869           61 -LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSE-----------------------VP----  111 (152)
Q Consensus        61 -~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------~~----  111 (152)
                       ..++.++|+||+||++|++++|+.||.+.      +..+....+ .....                       .+    
T Consensus       216 ~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (371)
T 4exu_A          216 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGK------DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF  289 (371)
T ss_dssp             CSCCCTTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCH
T ss_pred             CCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhH
Confidence             44578899999999999999999777654      222222211 11000                       00    


Q ss_pred             -CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 -EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 -~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                       ..+..+++++.++|.+||..||++||++.++++||||+.
T Consensus       290 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  329 (371)
T 4exu_A          290 TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  329 (371)
T ss_dssp             HHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence             112457899999999999999999999999999999975

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.8e-31  Score=188.11  Aligned_cols=141  Identities=27%  Similarity=0.365  Sum_probs=107.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                        
T Consensus        96 ~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  172 (311)
T 4agu_A           96 QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKH---SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPE  172 (311)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECC------------GGGCCHH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCC---CCEEEeeCCCchhccCcccccCCCcCCccccChH
Confidence            4568999999999999999999999999999999999999876   4555666551                        


Q ss_pred             -hh-cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cC------------------CCCC---
Q 039869           58 -RH-GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SS------------------EVPE---  112 (152)
Q Consensus        58 -~~-~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------------~~~~---  112 (152)
                       .. ...++.++|+||+|+++|++++|..||.+.      ...+....+..  ..                  ..+.   
T Consensus       173 ~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (311)
T 4agu_A          173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK------SDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPED  246 (311)
T ss_dssp             HHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSS
T ss_pred             HHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhcccccccccccccccccccCcCCCccc
Confidence             11 244578899999999999999999777654      22222211110  00                  0000   


Q ss_pred             ------CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 ------FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 ------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                            ....++.++.+++.+||..||++|||+.++++||||++-
T Consensus       247 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          247 MEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence                  013578889999999999999999999999999999864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=1.9e-31  Score=189.00  Aligned_cols=144  Identities=24%  Similarity=0.364  Sum_probs=113.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCC-chhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD-AHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~-~~~~~l~~~~~~----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++|++|+||||+||+++.++. ...++++|||..                      
T Consensus       109 ~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE  188 (321)
T 2a2a_A          109 KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE  188 (321)
T ss_dssp             CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcc
Confidence            356889999999999999999999999999999999999986631 115677777622                      


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        .+..++.++|+||+|+++|++++|..||.+.      ...+....+.......  ..+..++..+.+++.+||..||+
T Consensus       189 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  262 (321)
T 2a2a_A          189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETR  262 (321)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTT
T ss_pred             cccCCCCCCccccHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChh
Confidence              2334567899999999999999999777665      4444444443322211  22356889999999999999999


Q ss_pred             CCcCHHHHhcCCCCCCC
Q 039869          135 LRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~~~~~~l~h~~~~~~  151 (152)
                      +||++.++++||||+..
T Consensus       263 ~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          263 KRLTIQEALRHPWITPV  279 (321)
T ss_dssp             TSCCHHHHHHSTTTSCS
T ss_pred             hCcCHHHHhcCccccCC
Confidence            99999999999999863

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=186.28  Aligned_cols=138  Identities=25%  Similarity=0.363  Sum_probs=104.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+.                         
T Consensus       107 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  183 (278)
T 3cok_A          107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN---MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI  183 (278)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTT---CCEEECCCTTCEECC--------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC---CCEEEEeecceeeccCCCCcceeccCCCCcCCcch
Confidence            568999999999999999999999999999999999999876   4455555542                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+|+++|++++|+.|+.....      ........  ......+..++.++.+++.+||..||++||
T Consensus       184 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  255 (278)
T 3cok_A          184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV------KNTLNKVV--LADYEMPSFLSIEAKDLIHQLLRRNPADRL  255 (278)
T ss_dssp             --------CTHHHHHHHHHHHHHHSSCSSCCCSC------C-----CC--SSCCCCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH------HHHHHHHh--hcccCCccccCHHHHHHHHHHcccCHhhCC
Confidence            1223346789999999999999999977755421      11222211  112345677899999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++++||||++.
T Consensus       256 s~~~~l~h~~~~~~  269 (278)
T 3cok_A          256 SLSSVLDHPFMSRN  269 (278)
T ss_dssp             CHHHHTTSTTTC--
T ss_pred             CHHHHhcCccccCC
Confidence            99999999999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=189.51  Aligned_cols=140  Identities=26%  Similarity=0.414  Sum_probs=110.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.||+.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       124 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  200 (326)
T 2x7f_A          124 NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV  200 (326)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT---CCEEECCCTTTC-------------CCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCC---CCEEEeeCcCceecCcCccccccccCCccccChhh
Confidence            468999999999999999999999999999999999999876   44555555411                        


Q ss_pred             -h-----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 -H-----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 -~-----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                       .     +..++.++|+||||+++|++++|..||.+.      ........+.........+..++..+.+++.+||..|
T Consensus       201 ~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  274 (326)
T 2x7f_A          201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM------HPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKN  274 (326)
T ss_dssp             HC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSS
T ss_pred             hccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC------cHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccC
Confidence             1     334567899999999999999999777554      3344444444333333445678999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~~  151 (152)
                      |++||++.++++||||++.
T Consensus       275 p~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          275 HSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             GGGSCCHHHHHTSHHHHCC
T ss_pred             hhhCCCHHHHhhChHHhhC
Confidence            9999999999999999763

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=3.8e-31  Score=194.37  Aligned_cols=147  Identities=23%  Similarity=0.306  Sum_probs=104.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.||+.||.|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus       123 ~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~  199 (432)
T 3n9x_A          123 PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD---CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP  199 (432)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEEC--------------------
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCC---CCEEEccCCCcccccccccccccccccccccccc
Confidence            4569999999999999999999999999999999999999877   45566666521                       


Q ss_pred             -------------------------hcCCCCcchhHHHHHHHHHHHHhcCcccC-----------CccCCCC--------
Q 039869           59 -------------------------HGLLLIYHVDTWALGRVFVEMMTAEISAW-----------GSFGRGL--------   94 (152)
Q Consensus        59 -------------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~-----------~~~~~~~--------   94 (152)
                                               .+..++.++||||+||++|+|++|..|+.           +......        
T Consensus       200 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~  279 (432)
T 3n9x_A          200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKK  279 (432)
T ss_dssp             -----------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC---------
T ss_pred             cccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCccccccc
Confidence                                     23335778999999999999998543332           2110000        


Q ss_pred             ---------------------------CChHHHHHHHHhcCCCCC-----CCCCCChhHHHHHHHhhccccCCCcCHHHH
Q 039869           95 ---------------------------ASRDDLLELIAFSSEVPE-----FPSNISEDGRDFLSKCFIRVHQLRWTAKHV  142 (152)
Q Consensus        95 ---------------------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~  142 (152)
                                                 .........+........     ....+++++.+||.+||..||++|||+.++
T Consensus       280 ~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~  359 (432)
T 3n9x_A          280 VHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQA  359 (432)
T ss_dssp             -CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             ccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence                                       000011111111111111     114589999999999999999999999999


Q ss_pred             hcCCCCCCC
Q 039869          143 LAHPFPSVD  151 (152)
Q Consensus       143 l~h~~~~~~  151 (152)
                      ++||||++.
T Consensus       360 L~Hp~f~~~  368 (432)
T 3n9x_A          360 LDHPYLKDV  368 (432)
T ss_dssp             HTCGGGTTT
T ss_pred             hcChhhhhc
Confidence            999999863

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=1.9e-31  Score=192.24  Aligned_cols=139  Identities=22%  Similarity=0.299  Sum_probs=112.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.||+.||.|||+.|++|+||||+||+++.+   +.++++|||...                       
T Consensus       195 ~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~---~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~  271 (365)
T 2y7j_A          195 VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN---MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL  271 (365)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---CCEEEEecCcccccCCCcccccCCCCCCccChhhc
Confidence            468999999999999999999999999999999999999877   566777776211                       


Q ss_pred             -------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhc
Q 039869           60 -------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFI  130 (152)
Q Consensus        60 -------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~  130 (152)
                             ...++.++|+|||||++|++++|..||.+.      ........+.........  +..++..+.+++.+||.
T Consensus       272 ~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  345 (365)
T 2y7j_A          272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR------RQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQ  345 (365)
T ss_dssp             HHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSC
T ss_pred             cccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcC
Confidence                   123566899999999999999999777664      444454544443332221  24678899999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .||++||++.++++||||+.
T Consensus       346 ~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          346 VDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             SSTTTSCCHHHHHHSGGGCC
T ss_pred             CChhHCcCHHHHhcCcccCC
Confidence            99999999999999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=1.3e-31  Score=198.81  Aligned_cols=138  Identities=25%  Similarity=0.271  Sum_probs=113.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       110 ~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~---~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~  186 (476)
T 2y94_A          110 NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAH---MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV  186 (476)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTT---CCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecC---CCeEEEeccchhhccccccccccCCCcCeEChhh
Confidence            4578999999999999999999999999999999999999877   56777887722                       


Q ss_pred             -hcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..+ +.++|+||+||++|++++|..||.+.      ....+...+..+.  ...|..+++++.+++.+||..||++|
T Consensus       187 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~~Li~~~L~~dP~~R  258 (476)
T 2y94_A          187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD------HVPTLFKKICDGI--FYTPQYLNPSVISLLKHMLQVDPMKR  258 (476)
T ss_dssp             HTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS------SSHHHHHHHHTTC--CCCCTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             ccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC------CHHHHHHHHhcCC--cCCCccCCHHHHHHHHHHcCCCchhC
Confidence             11122 46799999999999999999777654      4445555554332  34567789999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.++++||||++
T Consensus       259 pt~~eil~hp~~~~  272 (476)
T 2y94_A          259 ATIKDIREHEWFKQ  272 (476)
T ss_dssp             CCHHHHHTCHHHHT
T ss_pred             cCHHHHHhCHHhhh
Confidence            99999999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=2.6e-31  Score=188.60  Aligned_cols=142  Identities=25%  Similarity=0.371  Sum_probs=107.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------H   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------~   59 (152)
                      .+++.+++.++.|++.||+|||++|++||||||+||+++.++  ..++++|||..                        .
T Consensus       126 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~--~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~  203 (330)
T 3nsz_A          126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV  203 (330)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--TEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHT
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC--CEEEEEeCCCceEcCCCCccccccccccccChhhhc
Confidence            478899999999999999999999999999999999998552  25677777722                        1


Q ss_pred             c-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHH------------HHHhcCC-----------------
Q 039869           60 G-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE------------LIAFSSE-----------------  109 (152)
Q Consensus        60 ~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-----------------  109 (152)
                      + ..++.++||||+||++|++++|+.||.....    ....+..            .......                 
T Consensus       204 ~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (330)
T 3nsz_A          204 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD----NYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR  279 (330)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS----HHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCC
T ss_pred             CCCcCCchhhHHHHHHHHHHHHhCCCCcccCCc----hHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccc
Confidence            1 3457789999999999999999978755421    1111111            1110000                 


Q ss_pred             -----CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          110 -----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       110 -----~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                           ....+..++.++.++|.+||..||++|||+.++++||||++-
T Consensus       280 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  326 (330)
T 3nsz_A          280 WERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  326 (330)
T ss_dssp             GGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             hhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence                 011122378999999999999999999999999999999863

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=2.8e-31  Score=190.77  Aligned_cols=139  Identities=24%  Similarity=0.312  Sum_probs=107.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      .++++..++.++.|++.||.|||++|++|+||||+||+++.+   +.++++|||.                        .
T Consensus       129 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~  205 (362)
T 3pg1_A          129 IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN---NDITICDFNLAREDTADANKTHYVTHRWYRAPELV  205 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECCTTC---------------CGGGCCHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCC---CCEEEEecCcccccccccccceecccceecCcHHh
Confidence            468999999999999999999999999999999999999877   4556666651                        1


Q ss_pred             hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcC---------------------CCC----
Q 039869           59 HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSS---------------------EVP----  111 (152)
Q Consensus        59 ~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------------~~~----  111 (152)
                      .+ ..++.++|+||+||++|++++|+.||.+.      ........+ ....                     ...    
T Consensus       206 ~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (362)
T 3pg1_A          206 MQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS------TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA  279 (362)
T ss_dssp             TTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC
T ss_pred             cCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCCh
Confidence            12 34577899999999999999999777654      222222221 1000                     000    


Q ss_pred             ----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 ----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 ----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                          ..+...++.+.+++.+||..||++||++.++++||||+.
T Consensus       280 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  322 (362)
T 3pg1_A          280 RAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES  322 (362)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred             hhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence                112456888999999999999999999999999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.97  E-value=2.4e-31  Score=185.76  Aligned_cols=142  Identities=25%  Similarity=0.430  Sum_probs=115.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++.+++.++.|++.||++||++|++|+||||+||+++.+.....++++||+...                       
T Consensus       116 ~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  195 (287)
T 2wei_A          116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL  195 (287)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHh
Confidence            468999999999999999999999999999999999999866544567777776321                       


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC--CCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ...++.++|+||+|+++|++++|..|+.+.      ....+...+..+......+  ..++.++.+++.+||..||++||
T Consensus       196 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  269 (287)
T 2wei_A          196 RGTYDEKCDVWSAGVILYILLSGTPPFYGK------NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI  269 (287)
T ss_dssp             TTCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCchhhHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCc
Confidence            112467899999999999999999777664      4555555555544433332  56899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||++
T Consensus       270 s~~ell~hp~~~~  282 (287)
T 2wei_A          270 TATQCLEHPWIQK  282 (287)
T ss_dssp             CHHHHHHSHHHHH
T ss_pred             CHHHHhcCHHHhc
Confidence            9999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=195.67  Aligned_cols=139  Identities=24%  Similarity=0.318  Sum_probs=110.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       157 ~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~---g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE  233 (412)
T 2vd5_A          157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRC---GHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE  233 (412)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCC---CCEEEeechhheeccCCCccccceeccccCcCCHH
Confidence            478999999999999999999999999999999999999887   56677777621                        


Q ss_pred             --h-------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc---CCCCCCCCCCChhHHHHHH
Q 039869           59 --H-------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS---SEVPEFPSNISEDGRDFLS  126 (152)
Q Consensus        59 --~-------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ll~  126 (152)
                        .       +..++.++|+||+||++|||++|+.||.+.      +..+....+...   ...+..+..++.++.++|.
T Consensus       234 ~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~  307 (412)
T 2vd5_A          234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD------STAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQ  307 (412)
T ss_dssp             HHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTHHHHCCCC----CCCHHHHHHHH
T ss_pred             HHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC------CHHHHHHHHHhcccCcCCCccccCCCHHHHHHHH
Confidence              1       123567899999999999999999888765      445544444321   2223345679999999999


Q ss_pred             HhhccccCCC---cCHHHHhcCCCCCCC
Q 039869          127 KCFIRVHQLR---WTAKHVLAHPFPSVD  151 (152)
Q Consensus       127 ~~l~~~p~~R---~~~~~~l~h~~~~~~  151 (152)
                      +||. +|.+|   +++.++++||||++-
T Consensus       308 ~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          308 RLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             TTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             HHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            9999 99998   589999999999863

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=5.6e-31  Score=184.14  Aligned_cols=139  Identities=30%  Similarity=0.427  Sum_probs=111.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec-CCCchhHHHHHHHHhh-----------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .+++..++.++.|++.||+|||++|++|+||||+||+++. +   +.++++||+...                       
T Consensus       118 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  194 (295)
T 2clq_A          118 KDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS---GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI  194 (295)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT---CCEEECCTTTCEESCC-----CCCCCCGGGCCHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCC---CCEEEeecccccccCCCCCcccccCCCccccChhh
Confidence            4678999999999999999999999999999999999986 4   456666665211                       


Q ss_pred             --c--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 --G--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 --~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        +  ..++.++|+||||+++|++++|..||....     ...............+..+..++.++.+++.+||..||++
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  269 (295)
T 2clq_A          195 IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG-----EPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDK  269 (295)
T ss_dssp             HHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGS-----SHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTT
T ss_pred             hcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCC-----chhHHHHhhccccccccccccCCHHHHHHHHHHccCChhh
Confidence              1  124678999999999999999997776542     2232223333334456677889999999999999999999


Q ss_pred             CcCHHHHhcCCCCCC
Q 039869          136 RWTAKHVLAHPFPSV  150 (152)
Q Consensus       136 R~~~~~~l~h~~~~~  150 (152)
                      ||++.++++||||+.
T Consensus       270 Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          270 RACANDLLVDEFLKV  284 (295)
T ss_dssp             SCCHHHHHTSGGGCC
T ss_pred             CCCHHHHhcChhhhh
Confidence            999999999999985

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.97  E-value=2e-31  Score=188.93  Aligned_cols=145  Identities=22%  Similarity=0.329  Sum_probs=112.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.++....++++|||..                       
T Consensus       108 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~  187 (322)
T 2ycf_A          108 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV  187 (322)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchh
Confidence            457899999999999999999999999999999999999987654445677776611                       


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC--CCCCCCCCChhHHHHHHHhhccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE--VPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                          .+..++.++|+||+|+++|++++|..||....     ....+...+.....  .+..+..++.++.+++.+||..|
T Consensus       188 ~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  262 (322)
T 2ycf_A          188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-----TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD  262 (322)
T ss_dssp             HHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT-----CSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             hccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc-----hHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccC
Confidence                13345678999999999999999997775542     22222222322221  12233568999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~~  151 (152)
                      |++||++.++++||||++.
T Consensus       263 P~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          263 PKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             TTTSCCHHHHHTSGGGCCH
T ss_pred             HhhCCCHHHHhhCcCcCCH
Confidence            9999999999999999863

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=1.1e-32  Score=198.85  Aligned_cols=137  Identities=12%  Similarity=0.058  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------hc--CCCCcc
Q 039869           11 GRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------HG--LLLIYH   66 (152)
Q Consensus        11 ~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------~~--~~~~~~   66 (152)
                      ..++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                      .+  ..++.+
T Consensus       197 ~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  273 (371)
T 3q60_A          197 HILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPD---GRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHA  273 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTT---SCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHH
T ss_pred             HHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCC---CCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCcc
Confidence            5777999999999999999999999999999887   56788888721                      22  345788


Q ss_pred             hhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH-HHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcC
Q 039869           67 VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL-ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus        67 ~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      +||||+||++|++++|+.||.+............. ............+..+++.+.+++.+||..||++||++.++++|
T Consensus       274 ~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            99999999999999999887765322111000000 00000111122235789999999999999999999999999999


Q ss_pred             CCCCC
Q 039869          146 PFPSV  150 (152)
Q Consensus       146 ~~~~~  150 (152)
                      |||++
T Consensus       354 p~f~~  358 (371)
T 3q60_A          354 PEFLQ  358 (371)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99964

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=3.1e-31  Score=186.50  Aligned_cols=143  Identities=20%  Similarity=0.335  Sum_probs=113.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------H   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------~   59 (152)
                      +++++..++.++.|++.||+|||++|++|+||||+||++........++++||+..                       .
T Consensus       101 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (304)
T 2jam_A          101 GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLA  180 (304)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhc
Confidence            46899999999999999999999999999999999999943222356677777622                       1


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      +..++.++|+||+|+++|++++|..||.+.      ........+......  ...+..++.++.+++.+||..||++||
T Consensus       181 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  254 (304)
T 2jam_A          181 QKPYSKAVDCWSIGVITYILLCGYPPFYEE------TESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERY  254 (304)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSC
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCc
Confidence            233467899999999999999999777654      445555555444322  234467899999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++++||||++.
T Consensus       255 s~~~~l~h~~~~~~  268 (304)
T 2jam_A          255 TCEKALSHPWIDGN  268 (304)
T ss_dssp             CHHHHHTSHHHHSS
T ss_pred             CHHHHhcCccccCC
Confidence            99999999999753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=2.3e-31  Score=200.72  Aligned_cols=142  Identities=23%  Similarity=0.326  Sum_probs=115.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       281 ~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~---g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl  357 (576)
T 2acx_A          281 AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV  357 (576)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCC---CCeEEEecccceecccCccccccCCCccccCHHHH
Confidence            348999999999999999999999999999999999999877   56777887722                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc-
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW-  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~-  137 (152)
                      .+..++.++|+||+||++|+|++|..||.+....  .....+...+..  ....++..++.++.++|.+||..||++|| 
T Consensus       358 ~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~--~~~~~i~~~i~~--~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g  433 (576)
T 2acx_A          358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--IKREEVERLVKE--VPEEYSERFSPQARSLCSQLLCKDPAERLG  433 (576)
T ss_dssp             TTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC--CCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             cCCCCCccchHHHHHHHHHHHHhCCCCCcccccc--hhHHHHHHHhhc--ccccCCccCCHHHHHHHHHhccCCHHHcCC
Confidence            2233577899999999999999999887664321  123444444432  23456678999999999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCC
Q 039869          138 ----TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ----~~~~~l~h~~~~~~  151 (152)
                          ++.++++||||++-
T Consensus       434 ~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          434 CRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             CSSSHHHHHHTSGGGTTC
T ss_pred             CCCCCHHHHHhChhhccC
Confidence                78999999999863

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=1.6e-31  Score=199.67  Aligned_cols=142  Identities=20%  Similarity=0.283  Sum_probs=117.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++..++.++.||+.||+|||++|++||||||+||+++.++....++++|||...                       
T Consensus       141 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  220 (504)
T 3q5i_A          141 HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL  220 (504)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHh
Confidence            568999999999999999999999999999999999999877554567888887321                       


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ...++.++||||+||++|++++|..||.+.      ....+...+..+......  +..++.++.+++.+||..||++||
T Consensus       221 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~  294 (504)
T 3q5i_A          221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQ------NDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRC  294 (504)
T ss_dssp             TTCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             ccCCCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCC
Confidence            122467899999999999999999777665      556666666655543322  256899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      |+.++++||||+.
T Consensus       295 t~~e~l~h~~~~~  307 (504)
T 3q5i_A          295 TAEEALNSRWIKK  307 (504)
T ss_dssp             CHHHHHTSHHHHH
T ss_pred             CHHHHhcCHhhhh
Confidence            9999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=1.8e-31  Score=188.17  Aligned_cols=139  Identities=17%  Similarity=0.190  Sum_probs=103.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC--------CCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH--------GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~--------~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------   58 (152)
                      +++++..+..++.|++.||+|||++        +|+||||||+|||++.+   +.++++|||..                
T Consensus        95 ~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~  171 (303)
T 3hmm_A           95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNH  171 (303)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEESCC---
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC---CCEEEEeCCCCccccCCCCceeeeccc
Confidence            4688999999999999999999987        99999999999999988   67888888831                


Q ss_pred             -hcCC------------------CCcchhHHHHHHHHHHHHhcCcccCCccCC---------CCCChHHHHHHHHhcCCC
Q 039869           59 -HGLL------------------LIYHVDTWALGRVFVEMMTAEISAWGSFGR---------GLASRDDLLELIAFSSEV  110 (152)
Q Consensus        59 -~~~~------------------~~~~~DvwslG~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~  110 (152)
                       .|+.                  ++.++|||||||++|||++|..|+......         .......+...+......
T Consensus       172 ~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~r  251 (303)
T 3hmm_A          172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR  251 (303)
T ss_dssp             --CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             ccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCC
Confidence             1111                  234799999999999999998544322111         111234444555545555


Q ss_pred             CCCCCCC-----ChhHHHHHHHhhccccCCCcCHHHHhc
Q 039869          111 PEFPSNI-----SEDGRDFLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       111 ~~~~~~~-----~~~~~~ll~~~l~~~p~~R~~~~~~l~  144 (152)
                      +.+|...     +..+.+++.+||..||++|||+.++++
T Consensus       252 p~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          252 PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            5555432     346789999999999999999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=1.1e-31  Score=194.01  Aligned_cols=141  Identities=25%  Similarity=0.363  Sum_probs=110.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.||+.||+|||+.|++||||||+||++.... .+.++++|||..                        
T Consensus       182 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  260 (373)
T 2x4f_A          182 YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD-AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV  260 (373)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETT-TTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCC-CCcEEEEeCCCceecCCccccccccCCCcEeChhhc
Confidence            3588999999999999999999999999999999999994221 145678887722                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++|||||||++|++++|..||.+.      +.......+......  ......+++++.++|.+||..||++|
T Consensus       261 ~~~~~~~~~DiwslG~il~elltg~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  334 (373)
T 2x4f_A          261 NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD------NDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWR  334 (373)
T ss_dssp             TTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             cCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhC
Confidence            2233466899999999999999999887665      444444444333221  22235689999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.++++||||++
T Consensus       335 ps~~e~l~hp~~~~  348 (373)
T 2x4f_A          335 ISASEALKHPWLSD  348 (373)
T ss_dssp             CCHHHHHHSHHHHC
T ss_pred             CCHHHHhcCcCcCC
Confidence            99999999999975

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=2.3e-31  Score=190.16  Aligned_cols=143  Identities=17%  Similarity=0.210  Sum_probs=106.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC----------------CCchhHHHHHHHH---------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG----------------KDAHEAEISAFLQ---------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~----------------~~~~~~~l~~~~~---------   57 (152)
                      .++++.+++.++.||+.||+|||++||+||||||+||++...                .....++++|||.         
T Consensus       118 ~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  197 (355)
T 2eu9_A          118 QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT  197 (355)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccccc
Confidence            468999999999999999999999999999999999999432                1225667777762         


Q ss_pred             -------------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCCC------------
Q 039869           58 -------------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEVP------------  111 (152)
Q Consensus        58 -------------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------  111 (152)
                                   ..+..++.++|+||+||++|++++|..||.+.      ........+ ......+            
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  271 (355)
T 2eu9_A          198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH------ENREHLVMMEKILGPIPSHMIHRTRKQKY  271 (355)
T ss_dssp             SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHHHCSCGGG
T ss_pred             CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHcCCCcHHHhhhccchhh
Confidence                         23445678899999999999999999777654      222222111 1111000            


Q ss_pred             -----------------------------CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          112 -----------------------------EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       112 -----------------------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                                   ......+.++.+++.+||..||++||++.++++||||++-
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          272 FYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             EETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             hcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence                                         0011224578899999999999999999999999999863

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=3.3e-31  Score=184.67  Aligned_cols=137  Identities=22%  Similarity=0.285  Sum_probs=112.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------RH   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------~~   59 (152)
                      +++++..++.++.|++.||.|||++|++|+||||+||+++.+   +.++++|||.                       ..
T Consensus       109 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  185 (284)
T 2vgo_A          109 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIE  185 (284)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT---CCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCC---CCEEEecccccccCcccccccccCCCCcCCHHHhc
Confidence            468999999999999999999999999999999999999877   4567777762                       22


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      +..++.++|+||+|+++|++++|..||...      ........+..  .....+..++.++.+++.+||..||++||++
T Consensus       186 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  257 (284)
T 2vgo_A          186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSP------SHTETHRRIVN--VDLKFPPFLSDGSKDLISKLLRYHPPQRLPL  257 (284)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHT--TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             cCCCCcccchhhHHHHHHHHHHCCCCCCCC------CHhHHHHHHhc--cccCCCCcCCHHHHHHHHHHhhcCHhhCCCH
Confidence            334577899999999999999999776554      44444444332  2345667899999999999999999999999


Q ss_pred             HHHhcCCCCCC
Q 039869          140 KHVLAHPFPSV  150 (152)
Q Consensus       140 ~~~l~h~~~~~  150 (152)
                      .++++||||++
T Consensus       258 ~~ll~h~~~~~  268 (284)
T 2vgo_A          258 KGVMEHPWVKA  268 (284)
T ss_dssp             HHHHTCHHHHH
T ss_pred             HHHhhCHHHHh
Confidence            99999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=2.6e-31  Score=190.64  Aligned_cols=140  Identities=21%  Similarity=0.290  Sum_probs=108.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH--hCCCccCCCCCCCeeeec-CCCchhHHHHHHHHh--------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIH--SHGLVHCDIQGDNTLLVA-GKDAHEAEISAFLQR--------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh--~~~i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~--------------------   58 (152)
                      +..+++..++.++.|++.||.|||  ++|++||||||+||+++. +   +.++++|||..                    
T Consensus       123 ~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~a  199 (360)
T 3e3p_A          123 QVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD---GTLKLCDFGSAKKLSPSEPNVAYICSRYYRA  199 (360)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTT---TEEEECCCTTCBCCCTTSCCCSTTSCGGGCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCC---CcEEEeeCCCceecCCCCCcccccCCcceeC
Confidence            356789999999999999999999  999999999999999985 5   56777887722                    


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCC-----------------------
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSE-----------------------  109 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------------  109 (152)
                           ....++.++||||+||++|++++|+.||.+.      +.......+.. ...                       
T Consensus       200 PE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
T 3e3p_A          200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD------NSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG  273 (360)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCC
T ss_pred             HHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC------ChHHHHHHHHHHcCCCCHHHHHhcccchhhcccccccc
Confidence                 1223578899999999999999999777664      33322222211 000                       


Q ss_pred             ------CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          110 ------VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       110 ------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                            .+..+...+.++.+++.+||..||++||++.++++||||++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  320 (360)
T 3e3p_A          274 IPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE  320 (360)
T ss_dssp             CCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred             CCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence                  01122335678999999999999999999999999999975

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=4.2e-31  Score=198.51  Aligned_cols=141  Identities=23%  Similarity=0.302  Sum_probs=114.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||.                         
T Consensus       284 ~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~---g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~  360 (543)
T 3c4z_A          284 PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD---GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL  360 (543)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCC---CCEEEeecceeeeccCCCcccccccCCccccChhh
Confidence            469999999999999999999999999999999999999877   5677777762                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+||++|+|++|..||.+...  ......+...+...  ...+|..++.++.+++.+||..||++||
T Consensus       361 l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~--~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~  436 (543)
T 3c4z_A          361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE--KVENKELKQRVLEQ--AVTYPDKFSPASKDFCEALLQKDPEKRL  436 (543)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC--CCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             hcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc--chhHHHHHHHHhhc--ccCCCcccCHHHHHHHHHhccCCHhHCC
Confidence            2233457789999999999999999988766421  11334454444332  3456788999999999999999999999


Q ss_pred             C-----HHHHhcCCCCCC
Q 039869          138 T-----AKHVLAHPFPSV  150 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~  150 (152)
                      +     +.+++.||||++
T Consensus       437 ~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          437 GFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             CCBTTBSHHHHTSGGGTT
T ss_pred             CCcccCHHHHHcCccccC
Confidence            6     478999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=1.6e-31  Score=185.60  Aligned_cols=142  Identities=15%  Similarity=0.194  Sum_probs=112.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||++..+.....++++||+...                       
T Consensus       101 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~  180 (277)
T 3f3z_A          101 RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL  180 (277)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHh
Confidence            468999999999999999999999999999999999999433333667788877321                       


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhccccCCCc
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ...++.++|+||+|+++|++++|..||.+.      ........+.......+.  ...+++++.+++.+||..||++||
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~  254 (277)
T 3f3z_A          181 EGLYGPECDEWSAGVMMYVLLCGYPPFSAP------TDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI  254 (277)
T ss_dssp             TTCBCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             cccCCchhhehhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCc
Confidence            111467899999999999999999777654      445555555443332211  136889999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||++
T Consensus       255 s~~~~l~h~~~~~  267 (277)
T 3f3z_A          255 TSLQALEHEWFEK  267 (277)
T ss_dssp             CHHHHTTSHHHHH
T ss_pred             CHHHHhcCHHHhc
Confidence            9999999999964

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=6.2e-31  Score=188.89  Aligned_cols=142  Identities=23%  Similarity=0.352  Sum_probs=112.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       154 ~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE  230 (355)
T 1vzo_A          154 ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD  230 (355)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CcEEEeeCCCCeecccCCCCcccCcccCcCccChh
Confidence            468999999999999999999999999999999999999877   55677777621                        


Q ss_pred             --hc--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 --HG--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 --~~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        .+  ..++.++|||||||++|++++|..||......  .....+...+..  ..+..+..++..+.+++.+||..||+
T Consensus       231 ~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~  306 (355)
T 1vzo_A          231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK--NSQAEISRRILK--SEPPYPQEMSALAKDLIQRLLMKDPK  306 (355)
T ss_dssp             HHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC--CCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             hhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc--chHHHHHHHHhc--cCCCCCcccCHHHHHHHHHHhhhCHH
Confidence              11  12357899999999999999999777644221  123333333332  23456778999999999999999999


Q ss_pred             CCc-----CHHHHhcCCCCCCC
Q 039869          135 LRW-----TAKHVLAHPFPSVD  151 (152)
Q Consensus       135 ~R~-----~~~~~l~h~~~~~~  151 (152)
                      +||     ++.++++||||+.-
T Consensus       307 ~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          307 KRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             GSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HhcCCCCCCHHHHHcCcchhcC
Confidence            999     99999999999863

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.97  E-value=7.4e-31  Score=183.87  Aligned_cols=140  Identities=22%  Similarity=0.310  Sum_probs=112.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       119 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  195 (298)
T 1phk_A          119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD---MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII  195 (298)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCC---CcEEEecccchhhcCCCcccccccCCccccCHHHh
Confidence            468999999999999999999999999999999999999877   45667776622                        


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhc
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~  130 (152)
                            .+..++.++|+||+|+++|++++|..|+.+.      ........+.........  ...++..+.+++.+||.
T Consensus       196 ~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  269 (298)
T 1phk_A          196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR------KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV  269 (298)
T ss_dssp             HHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCC
T ss_pred             ccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc------cHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHcc
Confidence                  1223467899999999999999999777654      444555544443333222  24688999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .||++||++.++++||||++.
T Consensus       270 ~dp~~Rps~~~ll~h~~~~~~  290 (298)
T 1phk_A          270 VQPQKRYTAEEALAHPFFQQY  290 (298)
T ss_dssp             SSGGGSCCHHHHTTSGGGCTT
T ss_pred             CCcccCCCHHHHHhChHhhhc
Confidence            999999999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=1.9e-31  Score=189.37  Aligned_cols=142  Identities=18%  Similarity=0.221  Sum_probs=106.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCC----------------chhHHHHHHH----------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD----------------AHEAEISAFL----------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~----------------~~~~~l~~~~----------   56 (152)
                      .++++.+++.++.|++.||+|||++|++||||||+||+++....                ...++++|||          
T Consensus       113 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  192 (339)
T 1z57_A          113 LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS  192 (339)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCC
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccc
Confidence            36899999999999999999999999999999999999975321                2346677776          


Q ss_pred             ------------HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCCC-------------
Q 039869           57 ------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSEV-------------  110 (152)
Q Consensus        57 ------------~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------  110 (152)
                                  ...+..++.++|+||+||++|++++|..||.+.      +..+....+.. ....             
T Consensus       193 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  266 (339)
T 1z57_A          193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH------DSKEHLAMMERILGPLPKHMIQKTRKRKY  266 (339)
T ss_dssp             SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS------CHHHHHHHHHHHHCSCCHHHHHHCSCGGG
T ss_pred             cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHhhccchhH
Confidence                        223445678899999999999999999777654      22222221110 0000             


Q ss_pred             ----------------------------CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 ----------------------------PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ----------------------------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                                                  ...+...++++.+++.+||..||++||++.++++||||+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          267 FHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             EETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             HhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence                                        0111223567889999999999999999999999999975

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=6.2e-31  Score=184.78  Aligned_cols=139  Identities=26%  Similarity=0.372  Sum_probs=113.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      ++.+++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+...                      
T Consensus       103 ~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  179 (305)
T 2wtk_C          103 EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFAADDTCRTSQGSPAFQP  179 (305)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCSSCEECCCCSCGGGCC
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCC---CcEEeeccccccccCccccccccccCCCCCCCcC
Confidence            4568999999999999999999999999999999999999877   556677766321                      


Q ss_pred             -----cC--CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           60 -----GL--LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        60 -----~~--~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                           +.  ..+.++|+||+|+++|++++|..||.+.      +.......+....  ...+..++..+.+++.+||..|
T Consensus       180 PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~i~~~~--~~~~~~~~~~l~~li~~~l~~d  251 (305)
T 2wtk_C          180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD------NIYKLFENIGKGS--YAIPGDCGPPLSDLLKGMLEYE  251 (305)
T ss_dssp             HHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHCC--CCCCSSSCHHHHHHHHHHTCSS
T ss_pred             hhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHhcCC--CCCCCccCHHHHHHHHHHccCC
Confidence                 11  1245799999999999999999777654      4555555554433  3456789999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~~  151 (152)
                      |++||++.++++||||++.
T Consensus       252 p~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          252 PAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             TTTSCCHHHHHHSHHHHSC
T ss_pred             hhhCCCHHHHhcCcccccC
Confidence            9999999999999999753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.97  E-value=3.7e-31  Score=186.70  Aligned_cols=141  Identities=26%  Similarity=0.357  Sum_probs=111.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++..++.++.|++.||.|||+.|++|+||||+||+++.+   +.++++||+..                       
T Consensus       119 ~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  195 (314)
T 3com_A          119 NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE  195 (314)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCC---CCEEEeecccchhhhhhccccCccCCCCCccChh
Confidence            3578999999999999999999999999999999999999877   45667777622                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc-CCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS-SEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++|..||...      ............ ......+..++..+.+++.+||..||++
T Consensus       196 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  269 (314)
T 3com_A          196 VIQEIGYNCVADIWSLGITAIEMAEGKPPYADI------HPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQ  269 (314)
T ss_dssp             HHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTT
T ss_pred             hcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhh
Confidence              2233467899999999999999999777554      333333322222 2222335568899999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      ||++.++++||||++.
T Consensus       270 Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          270 RATATQLLQHPFVRSA  285 (314)
T ss_dssp             SCCHHHHTTSHHHHTC
T ss_pred             CcCHHHHHhCHHHhcC
Confidence            9999999999999763

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.97  E-value=1.7e-30  Score=182.27  Aligned_cols=140  Identities=22%  Similarity=0.294  Sum_probs=105.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +.+++..++.++.|++.||.|||++|++|+||||+||+++.+   +.++++|||...                       
T Consensus       116 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y  192 (303)
T 2vwi_A          116 GVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED---GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW  192 (303)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT---CCEEECCCHHHHHCC---------------CCCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCC---CCEEEEeccchheeccCCCccchhhhcccCCCccc
Confidence            458999999999999999999999999999999999999877   445555555211                       


Q ss_pred             --------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-------CCCCCCCCChhHHHH
Q 039869           60 --------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-------VPEFPSNISEDGRDF  124 (152)
Q Consensus        60 --------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l  124 (152)
                              ...++.++|+||+|+++|++++|..||....     ..............       .......++.++.++
T Consensus       193 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (303)
T 2vwi_A          193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-----PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKM  267 (303)
T ss_dssp             CCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC-----GGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHH
T ss_pred             cCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc-----hhhHHHHHhccCCCccccccccchhhhhhhHHHHHH
Confidence                    1234678999999999999999997776542     22222222111111       112345688999999


Q ss_pred             HHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          125 LSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      +.+||..||++||++.++++||||+.
T Consensus       268 i~~~l~~dp~~Rps~~~ll~h~~~~~  293 (303)
T 2vwi_A          268 ISLCLQKDPEKRPTAAELLRHKFFQK  293 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred             HHHHccCChhhCcCHHHHhhChhhhc
Confidence            99999999999999999999999986

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=7.4e-31  Score=185.25  Aligned_cols=141  Identities=26%  Similarity=0.374  Sum_probs=110.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||.|||++|++||||||+||+++.    +.++++|||..                       
T Consensus       121 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~----~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a  196 (313)
T 3cek_A          121 KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP  196 (313)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCC--------------CCGGGCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC----CeEEEeeccccccccCccccccccCCCCCCCcCC
Confidence            356889999999999999999999999999999999999964    34556655411                       


Q ss_pred             ----hc-----------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHH
Q 039869           59 ----HG-----------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRD  123 (152)
Q Consensus        59 ----~~-----------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (152)
                          .+           ..++.++|+||||+++|++++|+.||....     ..................+...+.++.+
T Consensus       197 PE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~  271 (313)
T 3cek_A          197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNHEIEFPDIPEKDLQD  271 (313)
T ss_dssp             HHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTSCCCCCCCSCHHHHH
T ss_pred             HHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-----HHHHHHHHHHhcccccCCcccchHHHHH
Confidence                11           245568999999999999999997775442     3333333333334445566778899999


Q ss_pred             HHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          124 FLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       124 ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ++.+||..||++||++.++++||||+..
T Consensus       272 li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          272 VLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             HHHHHccCCcccCcCHHHHhcCccccCC
Confidence            9999999999999999999999999764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=2.6e-32  Score=197.36  Aligned_cols=131  Identities=21%  Similarity=0.226  Sum_probs=103.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------------------cC--
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------------------GL--   61 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------------------~~--   61 (152)
                      +++..++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||...                     +.  
T Consensus       203 l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~  279 (377)
T 3byv_A          203 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR---GGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRAT  279 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEEechhheecCCcccCCCCcCccChhhhccccc
Confidence            3458888999999999999999999999999999999877   567888887321                     22  


Q ss_pred             ---------CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           62 ---------LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        62 ---------~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                               .++.++|||||||++|++++|+.||.+......      ...      ....+..+++++.+++.+||..|
T Consensus       280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~------~~~------~~~~~~~~~~~~~~li~~~L~~d  347 (377)
T 3byv_A          280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG------SEW------IFRSCKNIPQPVRALLEGFLRYP  347 (377)
T ss_dssp             THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC------SGG------GGSSCCCCCHHHHHHHHHHTCSS
T ss_pred             ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc------hhh------hhhhccCCCHHHHHHHHHHcCCC
Confidence                     567889999999999999999977755432110      000      11223578999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~  150 (152)
                      |++||++.++++||||++
T Consensus       348 p~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          348 KEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             GGGCCCHHHHHTSHHHHH
T ss_pred             chhCCCHHHHhhChHHHH
Confidence            999999999999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=8.6e-32  Score=191.48  Aligned_cols=142  Identities=27%  Similarity=0.385  Sum_probs=107.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .+++++..++.++.|++.||+|||+.|++||||||+||+++.+   +.++++|||..                       
T Consensus       118 ~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE  194 (331)
T 4aaa_A          118 PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE  194 (331)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEECCCTTC------------CCCCCTTCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCC---CcEEEEeCCCceeecCCccccCCCcCCccccCcc
Confidence            3568999999999999999999999999999999999999877   45666666521                       


Q ss_pred             --hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cC------------------CCCC----
Q 039869           59 --HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SS------------------EVPE----  112 (152)
Q Consensus        59 --~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~~----  112 (152)
                        .+ ..++.++|+||+|+++|++++|+.||.+..     ........... +.                  ..+.    
T Consensus       195 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (331)
T 4aaa_A          195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS-----DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKER  269 (331)
T ss_dssp             HHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSC
T ss_pred             cccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHHHhCCCChhhhhHhhhccccccccCcccccc
Confidence              11 245678999999999999999997776542     22222111110 00                  0010    


Q ss_pred             -----CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 -----FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 -----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                           ....+++.+.+++.+||..||++||++.++++||||+.+
T Consensus       270 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          270 EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             chhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence                 113578899999999999999999999999999999754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=9.4e-31  Score=186.95  Aligned_cols=140  Identities=22%  Similarity=0.285  Sum_probs=112.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------------------   59 (152)
                      +.++++..++.++.|++.||+|||+ .|++|+||||+||+++.+   +.++++||+...                     
T Consensus       145 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~  221 (348)
T 2pml_X          145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN---GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEF  221 (348)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT---SCEEECCCTTCEECBTTEECSSCSCGGGCCGGG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC---CcEEEeccccccccccccccCCCCCcCccCchh
Confidence            4678999999999999999999999 999999999999999877   566777776321                     


Q ss_pred             --cC-CCCc-chhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCC-------------------CC
Q 039869           60 --GL-LLIY-HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFP-------------------SN  116 (152)
Q Consensus        60 --~~-~~~~-~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~  116 (152)
                        +. .++. ++|+||+|+++|++++|..||....     ........+.....  ..+                   ..
T Consensus       222 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  294 (348)
T 2pml_X          222 FSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI-----SLVELFNNIRTKNI--EYPLDRNHFLYPLTNKKSTCSNNF  294 (348)
T ss_dssp             GSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS-----CSHHHHHHHTSCCC--CCCCSSSSSTTTTCC--------C
T ss_pred             hcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHhccCc--CCccchhhhhccccccccccchhh
Confidence              11 2233 8999999999999999997776543     32455555443322  222                   56


Q ss_pred             CChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          117 ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       117 ~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ++.++.+++.+||..||++||++.++++||||++.
T Consensus       295 ~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          295 LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence            88999999999999999999999999999999874

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=2.1e-31  Score=191.84  Aligned_cols=149  Identities=23%  Similarity=0.359  Sum_probs=106.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecC---CCchhHHHHHHHH---------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAG---KDAHEAEISAFLQ---------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~---~~~~~~~l~~~~~---------------------   57 (152)
                      +++++..++.++.||+.||+|||++ |++||||||+||+++..   .....++++|||.                     
T Consensus       126 ~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE  205 (373)
T 1q8y_A          126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPE  205 (373)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHH
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcH
Confidence            4589999999999999999999998 99999999999999643   1223567777762                     


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHH-HHHHhcCC--------------------------
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL-ELIAFSSE--------------------------  109 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------------------------  109 (152)
                       ..+..++.++||||+||++|++++|..||.+............. ........                          
T Consensus       206 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  285 (373)
T 1q8y_A          206 VLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNIS  285 (373)
T ss_dssp             HHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCC
T ss_pred             HHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccc
Confidence             23444678899999999999999999777654322211122111 11111110                          


Q ss_pred             -------------CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          110 -------------VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       110 -------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                   ...++..++.++.++|.+||..||++||++.++++||||++.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  340 (373)
T 1q8y_A          286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  340 (373)
T ss_dssp             CCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence                         012233456778999999999999999999999999999863

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=6.2e-31  Score=188.21  Aligned_cols=139  Identities=20%  Similarity=0.320  Sum_probs=106.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       107 ~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~  183 (353)
T 2b9h_A          107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN---CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV  183 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECC----------------CCCC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCC---CcEEEEecccccccccccccccCccccccchhhcc
Confidence            468999999999999999999999999999999999999876   45566666521                        


Q ss_pred             ------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHh-------------------
Q 039869           59 ------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAF-------------------  106 (152)
Q Consensus        59 ------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------------  106 (152)
                                  .+..++.++|+||+||++|++++|+.||.+..      ....... ...                   
T Consensus       184 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (353)
T 2b9h_A          184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD------YRHQLLLIFGIIGTPHSDNDLRCIESPRAR  257 (353)
T ss_dssp             CCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCCCCSTTTTTTCCCHHHH
T ss_pred             ccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCchhccccccccchhh
Confidence                        12345678999999999999999997776542      1111111 100                   


Q ss_pred             -----cCCCC-----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          107 -----SSEVP-----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       107 -----~~~~~-----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                           ....+     ..+..++.++.+++.+||..||++||++.++++||||+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (353)
T 2b9h_A          258 EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT  311 (353)
T ss_dssp             HHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                 00000     112467899999999999999999999999999999985

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=2.7e-31  Score=192.36  Aligned_cols=142  Identities=22%  Similarity=0.318  Sum_probs=104.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHH--hCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIH--SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh--~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~   58 (152)
                      +++++..++.++.|++.||.|||  +.||+||||||+||+++... ...++++|||.                      .
T Consensus       152 ~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~-~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~  230 (382)
T 2vx3_A          152 RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVL  230 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTT-SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCC-CCcEEEEeccCceecccccccccCCccccChHHH
Confidence            46899999999999999999999  57999999999999995321 14567777762                      2


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh-cCCCCC---------------CC--------
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF-SSEVPE---------------FP--------  114 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------~~--------  114 (152)
                      .+..++.++||||+||++|++++|+.||.+.      +.......+.. ....+.               ++        
T Consensus       231 ~~~~~~~~~DiwSlG~il~elltg~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (382)
T 2vx3_A          231 LGMPYDLAIDMWSLGCILVEMHTGEPLFSGA------NEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKK  304 (382)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccccc
Confidence            3344678999999999999999999777654      32222222111 000000               00        


Q ss_pred             ----------CC----------------------------CChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          115 ----------SN----------------------------ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       115 ----------~~----------------------------~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                ..                            ...++.+||.+||..||++|||+.++++||||++.
T Consensus       305 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          305 TKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             CCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             ccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                      00                            01368899999999999999999999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.97  E-value=1.4e-30  Score=180.87  Aligned_cols=139  Identities=17%  Similarity=0.220  Sum_probs=111.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC-----CccCCCCCCCeeeecCCCchhHHHHHHHH--------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHG-----LVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~-----i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------   57 (152)
                      .++++..++.++.|++.||+|||+.+     ++|+||||+||+++.+   +.++++||+.                    
T Consensus       106 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y  182 (279)
T 2w5a_A          106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTSFAKTFVGTPYY  182 (279)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSS---SCEEECCCCHHHHC---CHHHHHHHSCCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCC---CCEEEecCchheeeccccccccccCCCccc
Confidence            45899999999999999999999998     9999999999999877   3445555441                    


Q ss_pred             -----hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           58 -----RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        58 -----~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                           ..+..++.++|+||+|+++|++++|..|+...      ....+...+.... .+.++..++.++.+++.+||..|
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~  255 (279)
T 2w5a_A          183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF------SQKELAGKIREGK-FRRIPYRYSDELNEIITRMLNLK  255 (279)
T ss_dssp             CCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc------CHHHHHHHHhhcc-cccCCcccCHHHHHHHHHHcCCC
Confidence                 22334567899999999999999999666554      4455555554433 34567789999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~~  151 (152)
                      |++||++.++++|+|+.+.
T Consensus       256 p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          256 DYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             GGGSCCHHHHHTSTTCCGG
T ss_pred             cccCCCHHHHHhChhhhhh
Confidence            9999999999999999764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=6.1e-31  Score=185.60  Aligned_cols=142  Identities=27%  Similarity=0.371  Sum_probs=108.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+.  ..++++|||..                       
T Consensus       114 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~  191 (320)
T 2i6l_A          114 QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED--LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR  191 (320)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--TEEEECCCTTCBCC--------CCCGGGSCCTTC
T ss_pred             cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CeEEEccCccccccCCCccccccccccccccccc
Confidence            35689999999999999999999999999999999999997431  45566666521                       


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-----------------------
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-----------------------  109 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------  109 (152)
                            .+..++.++|+||||+++|++++|+.||.+.      ........+.....                       
T Consensus       192 aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (320)
T 2i6l_A          192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA------HELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT  265 (320)
T ss_dssp             CHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTT
T ss_pred             CcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCchhhhhhhhhcCccccccccc
Confidence                  1133567899999999999999999777654      22222222111100                       


Q ss_pred             CC-----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          110 VP-----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       110 ~~-----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .+     ..+..++.++.+++.+||..||++||++.++++||||+..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          266 EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             SCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             CCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence            00     1234689999999999999999999999999999999753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3e-31  Score=189.34  Aligned_cols=139  Identities=23%  Similarity=0.299  Sum_probs=107.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh--------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR--------------------------   58 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~--------------------------   58 (152)
                      +++..++.++.|++.||+|||++|++||||||+||+++.++. ..++++|||..                          
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  243 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS-FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP  243 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS-CCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCC-ceEEEeeccccccccccCccccccccccCCCccccCc
Confidence            357889999999999999999999999999999999975521 24566666521                          


Q ss_pred             ---hc--CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCC--CCCCChhHHHHHHHhhcc
Q 039869           59 ---HG--LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEF--PSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        59 ---~~--~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~  131 (152)
                         .+  ..++.++||||||+++|++++|+.||.+.      ........+.........  ...++.++.+++.+||..
T Consensus       244 E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  317 (345)
T 3hko_A          244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGV------NDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNR  317 (345)
T ss_dssp             HHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCS
T ss_pred             hhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------ChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCC
Confidence               11  34567899999999999999999777655      444444444333332222  234789999999999999


Q ss_pred             ccCCCcCHHHHhcCCCCCC
Q 039869          132 VHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~~~  150 (152)
                      +|++||++.++++||||++
T Consensus       318 ~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          318 NVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             CTTTSCCHHHHHHSHHHHT
T ss_pred             ChhHCCCHHHHhcChhhcc
Confidence            9999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=6.9e-31  Score=187.22  Aligned_cols=137  Identities=20%  Similarity=0.265  Sum_probs=112.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.|++.||.|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       136 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~  212 (335)
T 2owb_A          136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED---LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV  212 (335)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCC---CCEEEeeccCceecccCcccccccCCCccccCHHH
Confidence            468999999999999999999999999999999999999877   55677777632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||||+++|++++|..||...      ...+....+...  ...++..++.++.+++.+||..||++||
T Consensus       213 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rp  284 (335)
T 2owb_A          213 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------CLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARP  284 (335)
T ss_dssp             HHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hccCCCCchhhHHHHHHHHHHHHHCcCCCCCC------CHHHHHHHHhcC--CCCCCccCCHHHHHHHHHHccCChhHCc
Confidence             2233467899999999999999999777554      344444443332  2345678899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||+.
T Consensus       285 s~~ell~~~~~~~  297 (335)
T 2owb_A          285 TINELLNDEFFTS  297 (335)
T ss_dssp             CGGGGGGSHHHHT
T ss_pred             CHHHHhcCccccC
Confidence            9999999999975

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=8.3e-31  Score=189.18  Aligned_cols=139  Identities=24%  Similarity=0.389  Sum_probs=104.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~~   58 (152)
                      ..+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||                        ..
T Consensus       122 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  198 (371)
T 2xrw_A          122 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI  198 (371)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECCCCC----------------CTTCCHHHH
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC---CCEEEEEeecccccccccccCCceecCCccCHHHh
Confidence            357899999999999999999999999999999999999877   455566554                        22


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC--------------------CCCC-----
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE--------------------VPEF-----  113 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-----  113 (152)
                      .+..++.++||||+||++|++++|+.||.+.      +.......+.....                    .+..     
T Consensus       199 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (371)
T 2xrw_A          199 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGT------DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF  272 (371)
T ss_dssp             TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCH
T ss_pred             cCCCCCchHhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccch
Confidence            3344578899999999999999999777654      22222222211100                    0000     


Q ss_pred             ---------CC------CCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          114 ---------PS------NISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       114 ---------~~------~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                               +.      ..+.++.+||.+||..||++|||+.++++||||+.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          273 EKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence                     00      01467899999999999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=1.1e-30  Score=182.90  Aligned_cols=137  Identities=20%  Similarity=0.265  Sum_probs=112.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       110 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  186 (294)
T 2rku_A          110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED---LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV  186 (294)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCC---CCEEEEeccCceecccCccccccccCCCCcCCcch
Confidence            468999999999999999999999999999999999999877   55677777632                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|+||+|+++|++++|..|+...      ...+....+..  .....+..++..+.+++.+||..||++||
T Consensus       187 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  258 (294)
T 2rku_A          187 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS------CLKETYLRIKK--NEYSIPKHINPVAASLIQKMLQTDPTARP  258 (294)
T ss_dssp             HTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHT--TCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHhh--ccCCCccccCHHHHHHHHHHcccChhhCc
Confidence             1223467899999999999999999777554      33444433332  23456678899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      ++.++++||||..
T Consensus       259 s~~~ll~~~~~~~  271 (294)
T 2rku_A          259 TINELLNDEFFTS  271 (294)
T ss_dssp             CGGGGGGSHHHHT
T ss_pred             CHHHHhhChheec
Confidence            9999999999965

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=1.1e-30  Score=187.70  Aligned_cols=145  Identities=21%  Similarity=0.337  Sum_probs=108.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~   58 (152)
                      +++++..+..++.|++.||+|||+. |++|+||||+||+++.+   +.++++|||                       ..
T Consensus       126 ~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~  202 (360)
T 3eqc_A          126 GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL  202 (360)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT---CCEEECCCCCCHHHHHHC----CCCCTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCC---CCEEEEECCCCcccccccccCCCCCCCeECHHHH
Confidence            4688999999999999999999985 99999999999999877   445666665                       12


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCC------------------------------------CCCChHHHHH
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGR------------------------------------GLASRDDLLE  102 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~  102 (152)
                      .+..++.++|+||+|+++|++++|..||......                                    ..........
T Consensus       203 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (360)
T 3eqc_A          203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLD  282 (360)
T ss_dssp             TTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhh
Confidence            3344577899999999999999999777543210                                    0001112222


Q ss_pred             HHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          103 LIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .+............++.++.+++.+||..||++|||+.++++||||++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  330 (360)
T 3eqc_A          283 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  330 (360)
T ss_dssp             HHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence            222222222233457899999999999999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=2.6e-30  Score=183.10  Aligned_cols=137  Identities=21%  Similarity=0.337  Sum_probs=106.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      ++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                          
T Consensus       133 ~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE  209 (323)
T 3qup_A          133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED---MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE  209 (323)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC-----------------CCGGGCCHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC---CCEEEeeccccccccccccccccccccCcccccCch
Confidence            58999999999999999999999999999999999999877   4555666551                          


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||+||++|++++ |..|+.+.      ........+.. ......+..++.++.+++.+||..||++
T Consensus       210 ~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~  282 (323)
T 3qup_A          210 SLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI------ENAEIYNYLIG-GNRLKQPPECMEEVYDLMYQCWSADPKQ  282 (323)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CGGGHHHHHHT-TCCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             hhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc------ChHHHHHHHhc-CCCCCCCCccCHHHHHHHHHHccCChhh
Confidence             123335778999999999999999 77665544      44444444433 3344567789999999999999999999


Q ss_pred             CcC-------HHHHhcCCCCCC
Q 039869          136 RWT-------AKHVLAHPFPSV  150 (152)
Q Consensus       136 R~~-------~~~~l~h~~~~~  150 (152)
                      ||+       +++++.|+|+..
T Consensus       283 Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          283 RPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             SCCHHHHHHHHHHHHHC-----
T ss_pred             CcCHHHHHHHHHHHHHHhhhcC
Confidence            999       777889999875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=8e-31  Score=181.92  Aligned_cols=138  Identities=25%  Similarity=0.278  Sum_probs=110.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||++||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       106 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  182 (276)
T 2h6d_A          106 GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAH---MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVI  182 (276)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTT---SCEEECCCCGGGCCCC-------------CCTGGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCC---CCEEEeecccccccCCCcceecccCCccccCHHHH
Confidence            468899999999999999999999999999999999999877   44556665522                        


Q ss_pred             hcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..+ +.++|+||+|+++|++++|..|+...      ........+...  ....+..++.++.+++.+||..||++||
T Consensus       183 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp  254 (276)
T 2h6d_A          183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDE------HVPTLFKKIRGG--VFYIPEYLNRSVATLLMHMLQVDPLKRA  254 (276)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCCccchHHHHHHHHHHHHhCCCCCCCC------cHHHHHHHhhcC--cccCchhcCHHHHHHHHHHccCChhhCC
Confidence            11112 46799999999999999999776554      444555444433  2345677899999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++++||||++.
T Consensus       255 s~~~~l~h~~~~~~  268 (276)
T 2h6d_A          255 TIKDIREHEWFKQD  268 (276)
T ss_dssp             CHHHHHHSHHHHTT
T ss_pred             CHHHHHhChhhccC
Confidence            99999999999764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.97  E-value=9.1e-31  Score=184.81  Aligned_cols=141  Identities=21%  Similarity=0.313  Sum_probs=108.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------   58 (152)
                      ++++++..++.++.|++.||.|||+. |++|+||||+||+++.+   +.++++||+..                      
T Consensus       118 ~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  194 (318)
T 2dyl_A          118 QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER---GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPE  194 (318)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTT---SCEEECCCTTC--------------CCTTCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCC---CCEEEEECCCchhccCCccccccCCCccccChh
Confidence            35789999999999999999999985 99999999999999877   44556665511                      


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-CCCCCCCCChhHHHHHHHhhc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-VPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~  130 (152)
                             .+..++.++|+||+|+++|++++|..||....     .............. ..+....++.++.+++.+||.
T Consensus       195 ~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  269 (318)
T 2dyl_A          195 RIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-----TDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLT  269 (318)
T ss_dssp             HHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTC
T ss_pred             hcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-----ccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHcc
Confidence                   12345668999999999999999997775532     33344433332221 122234589999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .||++||++.++++||||++
T Consensus       270 ~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          270 KDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             SCTTTSCCHHHHTTSHHHHH
T ss_pred             CChhHCcCHHHHhhCHHHHh
Confidence            99999999999999999863

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=2.2e-30  Score=181.99  Aligned_cols=138  Identities=28%  Similarity=0.392  Sum_probs=113.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||.+||++|++|+||||+||+++.+   +.++++||+..                       
T Consensus       113 ~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  189 (303)
T 3a7i_A          113 PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE  189 (303)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCC---CCEEEeecccceecCccccccCccCCCcCccCHH
Confidence            3568999999999999999999999999999999999999877   45667776622                       


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++|+||||+++|++++|..|+...      ........+.. ...+..+..++..+.+++.+||..+|++|
T Consensus       190 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~R  262 (303)
T 3a7i_A          190 VIKQSAYDSKADIWSLGITAIELARGEPPHSEL------HPMKVLFLIPK-NNPPTLEGNYSKPLKEFVEACLNKEPSFR  262 (303)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHH-SCCCCCCSSCCHHHHHHHHHHCCSSGGGS
T ss_pred             HHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc------CHHHHHHHhhc-CCCCCCccccCHHHHHHHHHHcCCChhhC
Confidence              2333567899999999999999999776543      44444444433 33455677899999999999999999999


Q ss_pred             cCHHHHhcCCCCC
Q 039869          137 WTAKHVLAHPFPS  149 (152)
Q Consensus       137 ~~~~~~l~h~~~~  149 (152)
                      |++.++++||||.
T Consensus       263 ps~~~ll~~~~~~  275 (303)
T 3a7i_A          263 PTAKELLKHKFIL  275 (303)
T ss_dssp             CCHHHHTTCHHHH
T ss_pred             cCHHHHhhChhhh
Confidence            9999999999985

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=1.2e-31  Score=196.13  Aligned_cols=132  Identities=22%  Similarity=0.243  Sum_probs=105.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++..+..++.|++.||+|||++||+||||||+||+++.+   +.++++|||..                         
T Consensus       207 ~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~---~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~  283 (413)
T 3dzo_A          207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR---GGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERM  283 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecC---CeEEEEeccceeecCCccccCCCCceeCchhhhccc
Confidence            35677899999999999999999999999999999999988   55788888742                         


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                            .+..++.++|||||||++|++++|+.||.+.....      ....+      ......+++++.+++.+||..|
T Consensus       284 ~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~------~~~~~------~~~~~~~~~~~~~li~~~l~~d  351 (413)
T 3dzo_A          284 LPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG------GSEWI------FRSCKNIPQPVRALLEGFLRYP  351 (413)
T ss_dssp             STTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS------CSGGG------GSSCCCCCHHHHHHHHHHTCSS
T ss_pred             cccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh------hHHHH------HhhcccCCHHHHHHHHHHccCC
Confidence                  22234568999999999999999998776543211      11111      1122467899999999999999


Q ss_pred             cCCCcCHHHHhcCCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~~  150 (152)
                      |++||++.++++||||++
T Consensus       352 P~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          352 KEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             GGGSCCHHHHTTSHHHHH
T ss_pred             hhhCcCHHHHHhCHHHHH
Confidence            999999999999999863

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.97  E-value=1.2e-30  Score=185.03  Aligned_cols=132  Identities=19%  Similarity=0.286  Sum_probs=107.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeee-cCCCchhHHHHHHHHh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV-AGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~-~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++ .+   +.++++|||..                       
T Consensus       144 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~---~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~  220 (320)
T 3a99_A          144 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR---GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI  220 (320)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT---TEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCC---CCEEEeeCccccccccccccCCCCCccCCChHHh
Confidence            5689999999999999999999999999999999999998 44   56777887722                       


Q ss_pred             hcCC-CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLL-LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~-~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+.. .+.++|+||||+++|++++|+.||...        ....      ......+..++.++.+++.+||..||++||
T Consensus       221 ~~~~~~~~~~Di~slG~il~el~~g~~pf~~~--------~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  286 (320)
T 3a99_A          221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEII------RGQVFFRQRVSSECQHLIRWCLALRPSDRP  286 (320)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--------HHHH------HCCCCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCCCCccchHHhHHHHHHHHHHCCCCCCCh--------hhhh------cccccccccCCHHHHHHHHHHccCChhhCc
Confidence            1112 246789999999999999999776432        1111      112345567899999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++++||||++.
T Consensus       287 s~~~ll~hp~~~~~  300 (320)
T 3a99_A          287 TFEEIQNHPWMQDV  300 (320)
T ss_dssp             CHHHHHTSGGGSSC
T ss_pred             CHHHHhcCHhhcCc
Confidence            99999999999863

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=6.1e-31  Score=186.47  Aligned_cols=134  Identities=15%  Similarity=0.179  Sum_probs=102.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH---------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ---------------------------   57 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~---------------------------   57 (152)
                      .++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                           
T Consensus       161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (332)
T 3qd2_B          161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV  237 (332)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC---CCEEEeecCcccccccchhhccccccccccccccccC
Confidence            3456789999999999999999999999999999999877   4566666662                           


Q ss_pred             ----------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHH
Q 039869           58 ----------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSK  127 (152)
Q Consensus        58 ----------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~  127 (152)
                                ..+..++.++|+||+|+++|++++|..++..        .......... ...+..+...++++.+++.+
T Consensus       238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~  308 (332)
T 3qd2_B          238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------RVRIITDVRN-LKFPLLFTQKYPQEHMMVQD  308 (332)
T ss_dssp             -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHHHHHHHHT-TCCCHHHHHHCHHHHHHHHH
T ss_pred             CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------HHHHHHHhhc-cCCCcccccCChhHHHHHHH
Confidence                      1233457789999999999999998643211        1222222222 12222234567788999999


Q ss_pred             hhccccCCCcCHHHHhcCCCCCC
Q 039869          128 CFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       128 ~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ||..||++||++.++++||||++
T Consensus       309 ~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          309 MLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             HccCCCCcCCCHHHHhhchhhhc
Confidence            99999999999999999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=1.6e-30  Score=180.91  Aligned_cols=142  Identities=23%  Similarity=0.355  Sum_probs=111.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC-CchhHHHHHHHH------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK-DAHEAEISAFLQ------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~-~~~~~~l~~~~~------------------------   57 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||+++.++ ....++++||+.                        
T Consensus       103 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~  182 (283)
T 3bhy_A          103 ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI  182 (283)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcce
Confidence            4689999999999999999999999999999999999997653 122456666652                        


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                      ..+..++.++|+||+|+++|++++|..||.+.      ........+.......  ..+..++..+.+++.+||..||++
T Consensus       183 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  256 (283)
T 3bhy_A          183 VNYEPLGLEADMWSIGVITYILLSGASPFLGE------TKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKR  256 (283)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGG
T ss_pred             ecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc------chHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhH
Confidence            22334567899999999999999999777654      4444444443322211  223567899999999999999999


Q ss_pred             CcCHHHHhcCCCCCC
Q 039869          136 RWTAKHVLAHPFPSV  150 (152)
Q Consensus       136 R~~~~~~l~h~~~~~  150 (152)
                      ||++.++++||||+.
T Consensus       257 Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          257 RMTIAQSLEHSWIKA  271 (283)
T ss_dssp             SCCHHHHHHCHHHHH
T ss_pred             CcCHHHHHhCHHHHH
Confidence            999999999999863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=1.3e-29  Score=179.05  Aligned_cols=131  Identities=15%  Similarity=0.241  Sum_probs=109.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++..++.++.|++.||+|||++|  ++||||||+||+++.+   +.++++|||.                         
T Consensus       134 ~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~  210 (309)
T 3p86_A          134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK---YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV  210 (309)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTT---CCEEECCCC-----------------CCTTSCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCC---CcEEECCCCCCccccccccccccCCCCccccChhh
Confidence            889999999999999999999999  9999999999999877   4555666541                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+|+++|++++|+.||.+.      ........+.........+..+++++.+++.+||..+|++||
T Consensus       211 ~~~~~~~~~~DiwslG~il~elltg~~Pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  284 (309)
T 3p86_A          211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNL------NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRP  284 (309)
T ss_dssp             HTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS------CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCc
Confidence            22334577899999999999999999776554      556666666556666778889999999999999999999999


Q ss_pred             CHHHHhc
Q 039869          138 TAKHVLA  144 (152)
Q Consensus       138 ~~~~~l~  144 (152)
                      ++.++++
T Consensus       285 s~~~ll~  291 (309)
T 3p86_A          285 SFATIMD  291 (309)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.96  E-value=4.7e-30  Score=184.03  Aligned_cols=133  Identities=16%  Similarity=0.245  Sum_probs=107.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                         
T Consensus       189 ~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE  265 (359)
T 3vhe_A          189 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  265 (359)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC---CcEEEEeccceeeecccccchhccccCCCceeEChh
Confidence            48999999999999999999999999999999999999876   56677777732                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++||||+|+++|++++ |..||.+..     .......... .......+..+++++.+++..||..||++
T Consensus       266 ~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~  339 (359)
T 3vhe_A          266 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPSQ  339 (359)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----CSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc-----hhHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHccCChhh
Confidence              22334678999999999999998 887765542     2333333333 33445567889999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.++++|
T Consensus       340 Rps~~ell~~  349 (359)
T 3vhe_A          340 RPTFSELVEH  349 (359)
T ss_dssp             SCCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999999865

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=182.99  Aligned_cols=138  Identities=19%  Similarity=0.274  Sum_probs=111.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++.+++.++.||+.||+|||++||+||||||+||+++.++....++++|||...                       
T Consensus       176 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  255 (367)
T 3l9p_A          176 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP  255 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECH
Confidence            358899999999999999999999999999999999999866554567777777321                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++|||||||++|++++ |..||.+.      ....+...+.... ....+..++..+.+++.+||..+|+
T Consensus       256 E~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~------~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~  328 (367)
T 3l9p_A          256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK------SNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPE  328 (367)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCCHh
Confidence                2334678999999999999998 77666554      5556665555433 3455778999999999999999999


Q ss_pred             CCcCHHHHhcCCC
Q 039869          135 LRWTAKHVLAHPF  147 (152)
Q Consensus       135 ~R~~~~~~l~h~~  147 (152)
                      +||++.+++++.+
T Consensus       329 ~Rps~~eil~~l~  341 (367)
T 3l9p_A          329 DRPNFAIILERIE  341 (367)
T ss_dssp             GSCCHHHHHHHHH
T ss_pred             HCcCHHHHHHHHH
Confidence            9999999987643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=7.6e-30  Score=178.36  Aligned_cols=143  Identities=15%  Similarity=0.137  Sum_probs=105.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.....+.++++|||..                       
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt  178 (296)
T 4hgt_A           99 SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT  178 (296)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCC
Confidence            457899999999999999999999999999999999999932222256777777632                       


Q ss_pred             ---------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhh
Q 039869           59 ---------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCF  129 (152)
Q Consensus        59 ---------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l  129 (152)
                               .+..++.++||||+||++|++++|+.||.+............................+++++.+++..||
T Consensus       179 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  258 (296)
T 4hgt_A          179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  258 (296)
T ss_dssp             GGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             ccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHH
Confidence                     12234568999999999999999998876643322222222222222222222234678999999999999


Q ss_pred             ccccCCCcCHHHHhc
Q 039869          130 IRVHQLRWTAKHVLA  144 (152)
Q Consensus       130 ~~~p~~R~~~~~~l~  144 (152)
                      ..+|++||++.++++
T Consensus       259 ~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          259 SLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             TSCTTCCCCHHHHHH
T ss_pred             hcCCCCCCCHHHHHH
Confidence            999999999998764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=1.7e-29  Score=174.76  Aligned_cols=138  Identities=19%  Similarity=0.332  Sum_probs=111.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC---CccCCCCCCCeeeecCCC-----chhHHHHHHHH----------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHG---LVHCDIQGDNTLLVAGKD-----AHEAEISAFLQ----------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~---i~h~dlk~~Nil~~~~~~-----~~~~~l~~~~~----------------   57 (152)
                      ++++++..++.++.|++.||+|||++|   ++||||||+||+++....     .+.++++|||.                
T Consensus        99 ~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  178 (271)
T 3dtc_A           99 GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAY  178 (271)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCcc
Confidence            467899999999999999999999999   899999999999975221     24456666652                


Q ss_pred             -------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhc
Q 039869           58 -------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        58 -------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                             ..+..++.++|+||+|+++|++++|+.||.+.      ..................+..+++++.+++.+||.
T Consensus       179 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  252 (271)
T 3dtc_A          179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI------DGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWN  252 (271)
T ss_dssp             GGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS------CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             ceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhc
Confidence                   22344577899999999999999999777654      55555555555566667788899999999999999


Q ss_pred             cccCCCcCHHHHhcC
Q 039869          131 RVHQLRWTAKHVLAH  145 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h  145 (152)
                      .+|++||++.+++++
T Consensus       253 ~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          253 PDPHSRPSFTNILDQ  267 (271)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CCcccCcCHHHHHHH
Confidence            999999999999864

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=6.8e-30  Score=178.72  Aligned_cols=142  Identities=15%  Similarity=0.139  Sum_probs=104.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.+...+.++++|||..                       
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt  178 (296)
T 3uzp_A           99 SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT  178 (296)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccc
Confidence            457899999999999999999999999999999999999952222256777887732                       


Q ss_pred             ---------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhh
Q 039869           59 ---------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCF  129 (152)
Q Consensus        59 ---------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l  129 (152)
                               .+..++.++||||+|+++|++++|+.||.+.........................+..+++++.+++..||
T Consensus       179 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  258 (296)
T 3uzp_A          179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  258 (296)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             cccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHH
Confidence                     12223568999999999999999998876643222222222211112122222334678999999999999


Q ss_pred             ccccCCCcCHHHHh
Q 039869          130 IRVHQLRWTAKHVL  143 (152)
Q Consensus       130 ~~~p~~R~~~~~~l  143 (152)
                      ..||++||++.+++
T Consensus       259 ~~dp~~Rps~~~l~  272 (296)
T 3uzp_A          259 SLRFDDKPDYSYLR  272 (296)
T ss_dssp             TSCTTCCCCHHHHH
T ss_pred             hcCcCcCCCHHHHH
Confidence            99999999999876

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=1.4e-29  Score=179.97  Aligned_cols=134  Identities=16%  Similarity=0.252  Sum_probs=107.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       111 ~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a  187 (327)
T 3poz_A          111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA  187 (327)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET---TEEEECCTTHHHHHTTTCC-------CCCGGGSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCC---CCEEEccCcceeEccCCcccccccCCCccccccC
Confidence            3568999999999999999999999999999999999999887   55667776622                       


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||||+++|++++ |..||.+.      ....+...+.... ....+..++.++.+++.+||..+|
T Consensus       188 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p  260 (327)
T 3poz_A          188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI------PASEISSILEKGE-RLPQPPICTIDVYMIMVKCWMIDA  260 (327)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CGGGHHHHHHTTC-CCCCCTTBCHHHHHHHHHHTCSCG
T ss_pred             hHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC------CHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCCh
Confidence                22334678999999999999999 88666544      4444544444333 445667899999999999999999


Q ss_pred             CCCcCHHHHhcC
Q 039869          134 QLRWTAKHVLAH  145 (152)
Q Consensus       134 ~~R~~~~~~l~h  145 (152)
                      ++||++.+++++
T Consensus       261 ~~Rps~~ell~~  272 (327)
T 3poz_A          261 DSRPKFRELIIE  272 (327)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCCCHHHHHHH
Confidence            999999998753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.96  E-value=6.1e-30  Score=180.42  Aligned_cols=132  Identities=21%  Similarity=0.365  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeee-cCCCchhHHHHHHHHhh----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV-AGKDAHEAEISAFLQRH----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~-~~~~~~~~~l~~~~~~~----------------------   59 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++ .+   +.++++||+...                      
T Consensus       134 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~  210 (312)
T 2iwi_A          134 GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR---GCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI  210 (312)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTT---TEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCC---CeEEEEEcchhhhcccCcccccCCcccccCceee
Confidence            4689999999999999999999999999999999999998 55   567778876221                      


Q ss_pred             -cCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 -GLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 -~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       +..+ +.++|+||+|+++|++++|+.||...        ....      .....++..++.++.+++.+||..+|++||
T Consensus       211 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  276 (312)
T 2iwi_A          211 SRHQYHALPATVWSLGILLYDMVCGDIPFERD--------QEIL------EAELHFPAHVSPDCCALIRRCLAPKPSSRP  276 (312)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--------HHHH------HTCCCCCTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             ecCCCCCccchHHHHHHHHHHHHHCCCCCCCh--------HHHh------hhccCCcccCCHHHHHHHHHHccCChhhCc
Confidence             1112 34799999999999999999776432        1111      122345678899999999999999999999


Q ss_pred             CHHHHhcCCCCCCC
Q 039869          138 TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~~~~~l~h~~~~~~  151 (152)
                      ++.++++||||+..
T Consensus       277 s~~e~l~~~~~~~~  290 (312)
T 2iwi_A          277 SLEEILLDPWMQTP  290 (312)
T ss_dssp             CHHHHHHSTTTCC-
T ss_pred             CHHHHhcChhhcCc
Confidence            99999999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=1.5e-29  Score=182.72  Aligned_cols=132  Identities=19%  Similarity=0.310  Sum_probs=107.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      ..+++.+++.++.||+.||+|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       198 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  274 (370)
T 2psq_A          198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP  274 (370)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC---CCEEEccccCCcccCcccceecccCCCcccceECH
Confidence            458899999999999999999999999999999999999877   5667777762                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        ..+..++.++|+|||||++|++++ |..||.+.      ...++...+... ..+..+..++.++.+++.+||..+|+
T Consensus       275 E~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~  347 (370)
T 2psq_A          275 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------PVEELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAVPS  347 (370)
T ss_dssp             HHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CGGGHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             hHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChh
Confidence              223335678999999999999999 77666554      444454444433 34566788999999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       348 ~Rpt~~ell~  357 (370)
T 2psq_A          348 QRPTFKQLVE  357 (370)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=3.1e-29  Score=178.24  Aligned_cols=133  Identities=17%  Similarity=0.259  Sum_probs=107.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                        
T Consensus       111 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~---~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~a  187 (327)
T 3lzb_A          111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA  187 (327)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET---TEEEECCTTC----------------CCCGGGSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC---CCEEEccCcceeEccCccccccccCCCccccccC
Confidence            3568999999999999999999999999999999999999877   4566666652                        


Q ss_pred             ---hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           58 ---RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        58 ---~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                         ..+..++.++|+||+|+++|++++ |..||.+.      ....+...+... .....+..++.++.+++.+||..||
T Consensus       188 PE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp  260 (327)
T 3lzb_A          188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI------PASEISSILEKG-ERLPQPPICTIDVYMIMRKCWMIDA  260 (327)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CGGGHHHHHHTT-CCCCCCTTBCHHHHHHHHHHTCSSG
T ss_pred             HHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC------CHHHHHHHHHcC-CCCCCCccCCHHHHHHHHHHcCCCh
Confidence               123335778999999999999999 88666544      444555554433 3445677899999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       261 ~~Rps~~ell~  271 (327)
T 3lzb_A          261 DSRPKFRELII  271 (327)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=9.5e-30  Score=187.01  Aligned_cols=141  Identities=26%  Similarity=0.210  Sum_probs=98.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCch--hHHHHHHHHhh----------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH--EAEISAFLQRH----------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~--~~~l~~~~~~~----------------------   59 (152)
                      .+.+..++.++.||+.||+|||++||+||||||+||+++.+...+  .++++|||...                      
T Consensus       114 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~  193 (432)
T 3p23_A          114 AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI  193 (432)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSC
T ss_pred             CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCcc
Confidence            345567789999999999999999999999999999996432222  34477776211                      


Q ss_pred             ---------cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCC-CCCCCCCChhHHHHHHHh
Q 039869           60 ---------GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEV-PEFPSNISEDGRDFLSKC  128 (152)
Q Consensus        60 ---------~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~  128 (152)
                               +..++.++||||+||++|++++ |..||...      ............... ...+...+..+.+++.+|
T Consensus       194 APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  267 (432)
T 3p23_A          194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS------LQRQANILLGACSLDCLHPEKHEDVIARELIEKM  267 (432)
T ss_dssp             CGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST------TTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHH
T ss_pred             ChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh------hHHHHHHHhccCCccccCccccccHHHHHHHHHH
Confidence                     1223457999999999999999 66454332      222222222111111 111223455578999999


Q ss_pred             hccccCCCcCHHHHhcCCCCCC
Q 039869          129 FIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      |..||++||++.++++||||+.
T Consensus       268 L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          268 IAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             SCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HhCCHhhCCCHHHHHhCccccC
Confidence            9999999999999999999975

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.4e-29  Score=180.74  Aligned_cols=134  Identities=16%  Similarity=0.227  Sum_probs=106.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       167 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  243 (344)
T 1rjb_A          167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP  243 (344)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT---TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC---CcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence            348999999999999999999999999999999999999877   56777777632                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||||+++|++++ |..||.+..     ....+...+. ....+..+..+++++.+++.+||..||+
T Consensus       244 E~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~  317 (344)
T 1rjb_A          244 ESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP-----VDANFYKLIQ-NGFKMDQPFYATEEIYIIMQSCWAFDSR  317 (344)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----CSHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC-----cHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCCch
Confidence               22334678999999999999998 886665542     2233333333 3445566778999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       318 ~Rps~~~l~~~  328 (344)
T 1rjb_A          318 KRPSFPNLTSF  328 (344)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999998754

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=1.7e-29  Score=176.85  Aligned_cols=137  Identities=22%  Similarity=0.292  Sum_probs=103.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++|||..                         
T Consensus       112 ~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (303)
T 1zy4_A          112 NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDES---RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT  188 (303)
T ss_dssp             GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECCCCCCSCTTC--------------------
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCC---CCEEEeeCcchhhcccccchhccccccccccccccc
Confidence            46788999999999999999999999999999999999876   34455555411                         


Q ss_pred             --------------hc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc--CCCCCCCCCCChhH
Q 039869           59 --------------HG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS--SEVPEFPSNISEDG  121 (152)
Q Consensus        59 --------------~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  121 (152)
                                    .+ ..++.++|+||+|+++|++++   |+....     ........+...  ..++..+...+..+
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (303)
T 1zy4_A          189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ERVNILKKLRSVSIEFPPDFDDNKMKVE  260 (303)
T ss_dssp             -----CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHHHHHHHSTTCCCCTTCCTTTSHHH
T ss_pred             cCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hHHHHHHhccccccccCccccccchHHH
Confidence                          11 245778999999999999998   332221     222333333221  12334556677889


Q ss_pred             HHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          122 RDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       122 ~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .+++.+||..||++||++.++++||||+..
T Consensus       261 ~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          261 KKIIRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             HHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            999999999999999999999999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=5.2e-30  Score=180.92  Aligned_cols=138  Identities=17%  Similarity=0.222  Sum_probs=109.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  187 (311)
T 3ork_A          111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS  187 (311)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETT---SCEEECCCSCC------------------CCTTCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCC---CCEEEeeccCcccccccccccccccccCcCcccCC
Confidence            568999999999999999999999999999999999999877   4455666541                         


Q ss_pred             ---hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccc
Q 039869           58 ---RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        58 ---~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~  132 (152)
                         ..+..++.++|+||+|+++|++++|+.||.+.      ...............+  ..+..++.++.+++.+||..|
T Consensus       188 PE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  261 (311)
T 3ork_A          188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD------SPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN  261 (311)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSS
T ss_pred             HHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcC
Confidence               22334567899999999999999999777654      4444443333333222  123568999999999999999


Q ss_pred             cCCCcCHHHHhcCCCCC
Q 039869          133 HQLRWTAKHVLAHPFPS  149 (152)
Q Consensus       133 p~~R~~~~~~l~h~~~~  149 (152)
                      |++||+..+++.|+|++
T Consensus       262 P~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          262 PENRYQTAAEMRADLVR  278 (311)
T ss_dssp             GGGSCSSHHHHHHHHHH
T ss_pred             HhhChhhHHHHHHHHHH
Confidence            99999999999998864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.96  E-value=3.8e-29  Score=181.13  Aligned_cols=132  Identities=20%  Similarity=0.330  Sum_probs=108.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       186 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  262 (382)
T 3tt0_A          186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  262 (382)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC---CcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence            458999999999999999999999999999999999999877   56677777622                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|||||||++|++++ |..|+.+.      ...++...+... .....+..++.++.+++.+||..||+
T Consensus       263 E~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~  335 (382)
T 3tt0_A          263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------PVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWHAVPS  335 (382)
T ss_dssp             HHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHTT-CCCCCCSSCCHHHHHHHHHHTCSSGG
T ss_pred             HHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCccCCHHHHHHHHHHcCCChh
Confidence               23334678999999999999999 87666544      555555555433 34556788999999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       336 ~Rps~~ell~  345 (382)
T 3tt0_A          336 QRPTFKQLVE  345 (382)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=5.1e-29  Score=173.45  Aligned_cols=132  Identities=19%  Similarity=0.228  Sum_probs=104.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       111 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  187 (281)
T 1mp8_A          111 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE  187 (281)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECC-------------------CCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC---CCEEECccccccccCcccccccccCCCcccccChh
Confidence            468999999999999999999999999999999999999877   55667776621                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..||.+.      ........+... .....+..++.++.+++.+||..||++
T Consensus       188 ~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~------~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~  260 (281)
T 1mp8_A          188 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV------KNNDVIGRIENG-ERLPMPPNCPPTLYSLMTKCWAYDPSR  260 (281)
T ss_dssp             HHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC------CGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhh
Confidence              12334678999999999999997 77666554      333444444432 334567789999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       261 Rps~~~l~~  269 (281)
T 1mp8_A          261 RPRFTELKA  269 (281)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=5.7e-29  Score=173.92  Aligned_cols=135  Identities=21%  Similarity=0.382  Sum_probs=104.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +.++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++||+..                       
T Consensus       114 ~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~a  190 (289)
T 3og7_A          114 ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED---NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA  190 (289)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT---TEEEECCCC------------------CCCTTCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC---CCEEEccceeccccccccccccccccCCCccccC
Confidence            3568999999999999999999999999999999999999877   45566665421                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC---CCCCCCChhHHHHHHHh
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKC  128 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~  128 (152)
                             .+..++.++|+||+|+++|++++|+.||.+..     ....+...+......+   .....+++++.+++..|
T Consensus       191 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  265 (289)
T 3og7_A          191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-----NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAEC  265 (289)
T ss_dssp             HHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-----CHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHH
T ss_pred             chhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-----hHHHHHHHhcccccCcchhhccccCCHHHHHHHHHH
Confidence                   13334668999999999999999997776543     4455555554444333   33457899999999999


Q ss_pred             hccccCCCcCHHHHhc
Q 039869          129 FIRVHQLRWTAKHVLA  144 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~  144 (152)
                      |..+|++||++.++++
T Consensus       266 l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          266 LKKKRDERPSFPRILA  281 (289)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhhCCCHHHHHH
Confidence            9999999999999874

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=5.8e-29  Score=172.12  Aligned_cols=133  Identities=16%  Similarity=0.188  Sum_probs=107.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       101 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  177 (269)
T 4hcu_A          101 GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE  177 (269)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG---GCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCC---CCEEeccccccccccccccccccCcccccccCCHH
Confidence            458999999999999999999999999999999999999876   55666666522                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      ........+... .....+...+.++.+++.+||..+|++
T Consensus       178 ~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~  250 (269)
T 4hcu_A          178 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR------SNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWRERPED  250 (269)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC------CHHHHHHHHhcC-ccCCCCCcCCHHHHHHHHHHccCCccc
Confidence              22334678999999999999999 77555443      555555555433 344556778999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       251 Rps~~~ll~~  260 (269)
T 4hcu_A          251 RPAFSRLLRQ  260 (269)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=5.9e-29  Score=173.46  Aligned_cols=139  Identities=16%  Similarity=0.183  Sum_probs=110.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeecCCC--chhHHHHHHHHh-------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKD--AHEAEISAFLQR-------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~~~~--~~~~~l~~~~~~-------------------   58 (152)
                      +.++++..++.++.|++.||+|||++|  ++|+||||+||+++.++.  ...++++||+..                   
T Consensus       116 ~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aP  195 (287)
T 4f0f_A          116 AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAP  195 (287)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCG
T ss_pred             cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCc
Confidence            356899999999999999999999999  999999999999976532  112678888722                   


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                           .+..++.++|+||+|+++|++++|..||.....    ...............+..+..+++++.+++.+||..||
T Consensus       196 E~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  271 (287)
T 4f0f_A          196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY----GKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP  271 (287)
T ss_dssp             GGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC----CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             hhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc----cHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCCh
Confidence                 122235679999999999999999977755421    33334445555566677888999999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       272 ~~Rps~~~ll~  282 (287)
T 4f0f_A          272 KKRPHFSYIVK  282 (287)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=9.9e-30  Score=178.04  Aligned_cols=139  Identities=19%  Similarity=0.156  Sum_probs=105.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCC--chhHHHHHHHHh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--AHEAEISAFLQR---------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~--~~~~~l~~~~~~---------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.++.  ...++++|||..                     
T Consensus       100 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  179 (298)
T 1csn_A          100 GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS  179 (298)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCC
Confidence            356999999999999999999999999999999999999976532  233678887732                     


Q ss_pred             -----------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh---cCCCCCCCCCCChhHHHH
Q 039869           59 -----------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF---SSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        59 -----------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l  124 (152)
                                 .+..++.++|+||||+++|++++|+.||.+....   ........+..   ....+.....+++++.++
T Consensus       180 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  256 (298)
T 1csn_A          180 GTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA---TNKQKYERIGEKKQSTPLRELCAGFPEEFYKY  256 (298)
T ss_dssp             SCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC---CHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred             CCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc---ccHHHHHHHHhhccCccHHHHHhhCcHHHHHH
Confidence                       1223467899999999999999999777664321   22233222211   122223445789999999


Q ss_pred             HHHhhccccCCCcCHHHHh
Q 039869          125 LSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l  143 (152)
                      +..||..+|++||++.+++
T Consensus       257 i~~~l~~dp~~RP~~~~l~  275 (298)
T 1csn_A          257 MHYARNLAFDATPDYDYLQ  275 (298)
T ss_dssp             HHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHhcCCcccCCCHHHHH
Confidence            9999999999999999876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=7.5e-30  Score=181.08  Aligned_cols=140  Identities=23%  Similarity=0.314  Sum_probs=104.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhC-CCccCCCCCCCeeeecCCCchhHHHHHHHHh----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSH-GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~-~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~----------------------   58 (152)
                      ++.+++..+..++.|++.||.|||+. |++||||||+||+++.+   +.++++|||..                      
T Consensus       119 ~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE  195 (327)
T 3aln_A          119 DDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE  195 (327)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETT---TEEEECCCSSSCC--------------------
T ss_pred             cccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCC---CCEEEccCCCceecccccccccCCCCccccCce
Confidence            45789999999999999999999998 99999999999999877   45566665411                      


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC----CCCCCChhHHHHHHHh
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE----FPSNISEDGRDFLSKC  128 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~  128 (152)
                            .+..++.++|+||||+++|++++|..||.+..     ........... ...+.    ....++.++.+++.+|
T Consensus       196 ~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~  269 (327)
T 3aln_A          196 RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN-----SVFDQLTQVVK-GDPPQLSNSEEREFSPSFINFVNLC  269 (327)
T ss_dssp             ----------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCC-SCCCCCCCCSSCCCCHHHHHHHHHH
T ss_pred             eeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc-----hHHHHHHHHhc-CCCCCCCCcccccCCHHHHHHHHHH
Confidence                  23345678999999999999999997775432     11111111111 11122    2246889999999999


Q ss_pred             hccccCCCcCHHHHhcCCCCCC
Q 039869          129 FIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      |..||++||++.++++||||.+
T Consensus       270 l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          270 LTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             TCSSGGGSCCHHHHTTSHHHHH
T ss_pred             hhCChhhCcCHHHHHhChHHHH
Confidence            9999999999999999999853

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.96  E-value=4.5e-29  Score=177.85  Aligned_cols=132  Identities=16%  Similarity=0.218  Sum_probs=107.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.++.||+.||.|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       169 ~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  245 (343)
T 1luf_A          169 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP  245 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC---CeEEEeecCCCcccccCccccccCCCcccceecCh
Confidence            578999999999999999999999999999999999999876   4566666651                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        ..+..++.++|+||+|+++|++++ |..||.+.      ...++...+... ..+..+..++.++.+++.+||..||+
T Consensus       246 E~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~  318 (343)
T 1luf_A          246 ESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM------AHEEVIYYVRDG-NILACPENCPLELYNLMRLCWSKLPA  318 (343)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC------ChHHHHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCcc
Confidence              122335678999999999999999 88666554      555555555433 34456778999999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       319 ~Rps~~~~~~  328 (343)
T 1luf_A          319 DRPSFCSIHR  328 (343)
T ss_dssp             GSCCHHHHHH
T ss_pred             cCCCHHHHHH
Confidence            9999998864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=4.3e-29  Score=175.85  Aligned_cols=132  Identities=17%  Similarity=0.290  Sum_probs=105.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++|||..                         
T Consensus       141 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  217 (313)
T 1t46_A          141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE  217 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT---TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC---CCEEEccccccccccccccceeccCCCCcceeeChH
Confidence            58999999999999999999999999999999999999877   56677777632                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+..     .......... .......+..++.++.+++.+||..||++
T Consensus       218 ~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~  291 (313)
T 1t46_A          218 SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP-----VDSKFYKMIK-EGFRMLSPEHAPAEMYDIMKTCWDADPLK  291 (313)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----SSHHHHHHHH-HTCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc-----chhHHHHHhc-cCCCCCCcccCCHHHHHHHHHHcCCCchh
Confidence              12334678999999999999999 886665542     2233333333 23334456778999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       292 Rps~~ell~  300 (313)
T 1t46_A          292 RPTFKQIVQ  300 (313)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=1.5e-29  Score=179.61  Aligned_cols=133  Identities=20%  Similarity=0.264  Sum_probs=107.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||...                       
T Consensus       110 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  186 (325)
T 3kex_A          110 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL  186 (325)
T ss_dssp             GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSS---SCEEECSCSGGGGSCCCTTCCC-----CCTTTSCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCC---CeEEECCCCcccccCcccccccccCCCCcccccCh
Confidence            468899999999999999999999999999999999999877   556777776321                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++|+||+|+++|++++ |..||.+.      ....+...+... .....+..++.++.+++.+||..||+
T Consensus       187 E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~  259 (325)
T 3kex_A          187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL------RLAEVPDLLEKG-ERLAQPQICTIDVYMVMVKCWMIDEN  259 (325)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS------CTTHHHHHHHTT-CBCCCCTTBCTTTTHHHHHHTCSCTT
T ss_pred             HHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc------CHHHHHHHHHcC-CCCCCCCcCcHHHHHHHHHHcCCChh
Confidence                2234678999999999999999 88676554      344454444433 34455677899999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       260 ~Rps~~el~~~  270 (325)
T 3kex_A          260 IRPTFKELANE  270 (325)
T ss_dssp             TSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999998753

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=6.1e-29  Score=174.03  Aligned_cols=134  Identities=15%  Similarity=0.283  Sum_probs=108.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       118 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y  194 (298)
T 3pls_A          118 QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES---FTVKVADFGLARDILDREYYSVQQHRHARLPVKW  194 (298)
T ss_dssp             TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC---CcEEeCcCCCcccccCCcccccccCcCCCCCccc
Confidence            4568899999999999999999999999999999999999877   56677777632                       


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                            .+..++.++|+||+|+++|++++|..|++...     +.......+.... ....+..++..+.+++..||..+
T Consensus       195 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~  268 (298)
T 3pls_A          195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-----DPFDLTHFLAQGR-RLPQPEYCPDSLYQVMQQCWEAD  268 (298)
T ss_dssp             SCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-----CHHHHHHHhhcCC-CCCCCccchHHHHHHHHHHccCC
Confidence                  22334678999999999999999776776653     4455555544333 34556788999999999999999


Q ss_pred             cCCCcCHHHHhc
Q 039869          133 HQLRWTAKHVLA  144 (152)
Q Consensus       133 p~~R~~~~~~l~  144 (152)
                      |++||++.++++
T Consensus       269 p~~Rps~~~ll~  280 (298)
T 3pls_A          269 PAVRPTFRVLVG  280 (298)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999998763

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=4.6e-29  Score=177.25  Aligned_cols=132  Identities=15%  Similarity=0.243  Sum_probs=108.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       146 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~a  222 (325)
T 3kul_A          146 GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN---LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA  222 (325)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCSSCEECC----CCEECC---CCGGGSC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCC---CCEEECCCCcccccccCccceeeccCCCCcccccC
Confidence            578999999999999999999999999999999999999877   56667777621                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++||||+|+++|++++ |..||.+.      ........+... .....+..++.++.+++..||..||
T Consensus       223 PE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp  295 (325)
T 3kul_A          223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM------TNRDVISSVEEG-YRLPAPMGCPHALHQLMLDCWHKDR  295 (325)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC------CHHHHHHHHHcC-CCCCCCCCcCHHHHHHHHHHccCCh
Confidence                12334678999999999999999 88676554      555555555543 3445677899999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       296 ~~Rps~~eil~  306 (325)
T 3kul_A          296 AQRPRFSQIVS  306 (325)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999998864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.96  E-value=1.4e-28  Score=169.85  Aligned_cols=132  Identities=15%  Similarity=0.209  Sum_probs=106.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeecCCCchhHHHHHHH--------------------HhhcC
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKDAHEAEISAFL--------------------QRHGL   61 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~~~~~~~~~l~~~~--------------------~~~~~   61 (152)
                      ++++.+++.++.|++.||+|||+++  ++|+||||+||+++.++   .+++.+++                    ...+.
T Consensus       107 ~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~---~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  183 (271)
T 3kmu_A          107 VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM---TARISMADVKFSFQSPGRMYAPAWVAPEALQKK  183 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTS---CEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCc---ceeEEeccceeeecccCccCCccccChhhhccC
Confidence            5899999999999999999999999  99999999999998763   33333332                    11222


Q ss_pred             CCC---cchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           62 LLI---YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        62 ~~~---~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      ..+   .++|+||+|+++|++++|+.||.+.      ...............+..+..++.++.+++.+||..||++||+
T Consensus       184 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  257 (271)
T 3kmu_A          184 PEDTNRRSADMWSFAVLLWELVTREVPFADL------SNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPK  257 (271)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS------CHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCcccc------ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            122   2699999999999999999777654      5555555665566667788899999999999999999999999


Q ss_pred             HHHHhc
Q 039869          139 AKHVLA  144 (152)
Q Consensus       139 ~~~~l~  144 (152)
                      +.++++
T Consensus       258 ~~~il~  263 (271)
T 3kmu_A          258 FDMIVP  263 (271)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=5.8e-29  Score=175.46  Aligned_cols=133  Identities=16%  Similarity=0.252  Sum_probs=105.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.++.|++.||.|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       142 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  218 (313)
T 3brb_A          142 KHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD---MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI  218 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT---SCEEECSCSCC----------------CCGGGSCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC---CcEEEeecCcceecccccccCcccccCCCccccCc
Confidence            568999999999999999999999999999999999999877   4455555541                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        ..+..++.++|+||||+++|++++ |..|+.+.      ........... ...+..+..++.++.+++.+||..+|+
T Consensus       219 E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~  291 (313)
T 3brb_A          219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV------QNHEMYDYLLH-GHRLKQPEDCLDELYEIMYSCWRTDPL  291 (313)
T ss_dssp             HHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CGGGHHHHHHT-TCCCCCBTTCCHHHHHHHHHTTCSSGG
T ss_pred             hhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC------CHHHHHHHHHc-CCCCCCCccccHHHHHHHHHHcCCChh
Confidence              123335678999999999999999 66555443      33444444433 234556778999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       292 ~Rps~~~l~~~  302 (313)
T 3brb_A          292 DRPTFSVLRLQ  302 (313)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999998753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=4.3e-29  Score=177.22  Aligned_cols=132  Identities=20%  Similarity=0.327  Sum_probs=108.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       137 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  213 (327)
T 1fvr_A          137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESL  213 (327)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEESSCEECCC----CCTTTCCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCC---CeEEEcccCcCccccccccccCCCCCccccChhhh
Confidence            468999999999999999999999999999999999999876   56777777622                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      .+..++.++|+||+|+++|++++ |..||.+.      ........+... .....+..++.++.+++.+||..+|++||
T Consensus       214 ~~~~~~~~~Di~slG~il~ellt~g~~pf~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  286 (327)
T 1fvr_A          214 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM------TCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERP  286 (327)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccccCCchhcchHHHHHHHHHHcCCCCCCCCC------cHHHHHHHhhcC-CCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence            12224678999999999999998 88666554      455555555433 34456678999999999999999999999


Q ss_pred             CHHHHhc
Q 039869          138 TAKHVLA  144 (152)
Q Consensus       138 ~~~~~l~  144 (152)
                      ++.++++
T Consensus       287 s~~ell~  293 (327)
T 1fvr_A          287 SFAQILV  293 (327)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.96  E-value=2.9e-29  Score=176.81  Aligned_cols=132  Identities=21%  Similarity=0.324  Sum_probs=107.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                         
T Consensus       146 ~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  222 (314)
T 2ivs_A          146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG---RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE  222 (314)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT---TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHH
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC---CCEEEccccccccccccccceeccCCCCcccccChh
Confidence            48899999999999999999999999999999999999877   56777777622                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      ....+...+... ..+..+..+++++.+++.+||..||++
T Consensus       223 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~  295 (314)
T 2ivs_A          223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI------PPERLFNLLKTG-HRMERPDNCSEEMYRLMLQCWKQEPDK  295 (314)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC------CGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHhhcC-CcCCCCccCCHHHHHHHHHHccCChhh
Confidence              12224678999999999999999 88666554      444444444433 345567789999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       296 Rps~~~l~~~  305 (314)
T 2ivs_A          296 RPVFADISKD  305 (314)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998753

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.96  E-value=4.1e-29  Score=174.40  Aligned_cols=133  Identities=20%  Similarity=0.268  Sum_probs=109.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||.+||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       116 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  192 (291)
T 1u46_A          116 GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA  192 (291)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECCC-CCEEEC-----CCGGGCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCC---CCEEEccccccccccccccchhhhccCCCCceeeC
Confidence            458899999999999999999999999999999999999877   55667776621                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||+|+++|++++ |..|+.+.      +.......+.........+..++.++.+++.+||..||
T Consensus       193 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  266 (291)
T 1u46_A          193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL------NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP  266 (291)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             chhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC------CHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCc
Confidence                12224668999999999999999 88666554      55666666655555566677899999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       267 ~~Rps~~~l~~  277 (291)
T 1u46_A          267 EDRPTFVALRD  277 (291)
T ss_dssp             GGSCCHHHHHH
T ss_pred             ccCcCHHHHHH
Confidence            99999999874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=5.2e-29  Score=175.68  Aligned_cols=133  Identities=16%  Similarity=0.235  Sum_probs=106.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++..++.++.|++.||.|||++|++||||||+||+++.+   +.++++|||..                         
T Consensus       144 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE  220 (316)
T 2xir_A          144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  220 (316)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC---CCEEECCCccccccccCccceeccCCCcceeecCch
Confidence            38899999999999999999999999999999999999876   56677777632                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+..     ....+...... ......+..+++++.+++..||..||++
T Consensus       221 ~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~  294 (316)
T 2xir_A          221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQ  294 (316)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----CSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhccccccchhHHHHHHHHHHHHHhCCCCCCcccc-----hhHHHHHHhcc-CccCCCCCCCCHHHHHHHHHHcCCChhh
Confidence              12334678999999999999998 886665542     23334333333 2334566778999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.++++|
T Consensus       295 Rps~~ell~~  304 (316)
T 2xir_A          295 RPTFSELVEH  304 (316)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=5.6e-29  Score=176.91  Aligned_cols=133  Identities=17%  Similarity=0.298  Sum_probs=105.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       159 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  235 (333)
T 2i1m_A          159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP  235 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG---GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC---CeEEECccccccccccccceeecCCCCCCccccCH
Confidence            468999999999999999999999999999999999999877   56777777632                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||||+++|++++ |..|+.+..     .......... .......+..++..+.+++..||..||+
T Consensus       236 E~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~  309 (333)
T 2i1m_A          236 ESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-----VNSKFYKLVK-DGYQMAQPAFAPKNIYSIMQACWALEPT  309 (333)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----SSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc-----hhHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHhccChh
Confidence               12234678999999999999998 775665442     2233333333 2334455677899999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       310 ~Rps~~~l~~  319 (333)
T 2i1m_A          310 HRPTFQQICS  319 (333)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.96  E-value=7e-29  Score=171.56  Aligned_cols=133  Identities=19%  Similarity=0.279  Sum_probs=106.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||+.|++|+||||+||+++.+   +.++++||+..                        
T Consensus        99 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  175 (268)
T 3sxs_A           99 KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD---LCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE  175 (268)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTT---CCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCC---CCEEEccCccceecchhhhhcccCCCcCcccCCHH
Confidence            358999999999999999999999999999999999999877   56677777622                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+...      ............ .....+...++.+.+++..||..+|++
T Consensus       176 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~  248 (268)
T 3sxs_A          176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY------TNSEVVLKVSQG-HRLYRPHLASDTIYQIMYSCWHELPEK  248 (268)
T ss_dssp             HHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS------CHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHTTCSSGGG
T ss_pred             HHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc------ChHHHHHHHHcC-CCCCCCCcChHHHHHHHHHHcCCChhh
Confidence              12234678999999999999999 77665443      445554444433 334456778999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       249 Rps~~~ll~~  258 (268)
T 3sxs_A          249 RPTFQQLLSS  258 (268)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998864

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=1.2e-28  Score=171.55  Aligned_cols=133  Identities=19%  Similarity=0.212  Sum_probs=107.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       115 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (283)
T 3gen_A          115 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE  191 (283)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTT---SCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCC---CCEEEccccccccccccccccccCCccCcccCCHH
Confidence            468999999999999999999999999999999999999877   45666666522                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |+.||...      ........+... .....+...++.+.+++..||..+|++
T Consensus       192 ~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~  264 (283)
T 3gen_A          192 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------TNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADE  264 (283)
T ss_dssp             HHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc------ChhHHHHHHhcc-cCCCCCCcCCHHHHHHHHHHccCChhH
Confidence              22334678999999999999998 88666443      445555555433 334456778999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.++++|
T Consensus       265 Rps~~~ll~~  274 (283)
T 3gen_A          265 RPTFKILLSN  274 (283)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=8.1e-29  Score=179.16  Aligned_cols=132  Identities=15%  Similarity=0.170  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++.++..++.|++.||+|||++|++||||||+||+++.+   +.++++|||...                       
T Consensus       208 ~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~---~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aP  284 (377)
T 3cbl_A          208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP  284 (377)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCC---CcEEECcCCCceecCCCceeecCCCCCCCcCcCCH
Confidence            358899999999999999999999999999999999999877   567788887321                       


Q ss_pred             ----cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           60 ----GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        60 ----~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          +..++.++||||||+++||+++ |..|+.+.      ........+..+ ...+.|..++.++.+++.+||..||+
T Consensus       285 E~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~  357 (377)
T 3cbl_A          285 EALNYGRYSSESDVWSFGILLWETFSLGASPYPNL------SNQQTREFVEKG-GRLPCPELCPDAVFRLMEQCWAYEPG  357 (377)
T ss_dssp             HHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCch
Confidence                1223567999999999999998 77555443      455555555433 34456778999999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +||++.++++
T Consensus       358 ~Rps~~~i~~  367 (377)
T 3cbl_A          358 QRPSFSTIYQ  367 (377)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=2.5e-28  Score=172.05  Aligned_cols=136  Identities=21%  Similarity=0.293  Sum_probs=105.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +..+++..++.++.|++.||.|||++|++|+||||+||+++.+   +.++++||+.                        
T Consensus       130 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  206 (310)
T 2wqm_A          130 KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE  206 (310)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEECCC------------------CCSSCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCC---CCEEEEeccceeeecCCCccccccCCCeeEeChH
Confidence            3568999999999999999999999999999999999999877   4455555542                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..++.++|+||||+++|++++|..||.+...    ........+......+..+..++.++.+++.+||..||++|
T Consensus       207 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  282 (310)
T 2wqm_A          207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR  282 (310)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhC
Confidence             1233356789999999999999999988765432    34455555554444443446789999999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       283 ps~~~il~  290 (310)
T 2wqm_A          283 PDVTYVYD  290 (310)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99999874

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=1.6e-28  Score=181.38  Aligned_cols=130  Identities=19%  Similarity=0.296  Sum_probs=106.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------------------------   59 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~------------------------   59 (152)
                      .+++..+..++.||+.||+|||+++++||||||+||+++.+   +.++++|||...                        
T Consensus       280 ~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~  356 (454)
T 1qcf_A          280 KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA  356 (454)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTT---CCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCC---CcEEEeeCCCceEcCCCceeccCCCcccccccCHHH
Confidence            57888999999999999999999999999999999999877   566777776221                        


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        +..++.++||||||+++||+++ |+.||.+.      ...++...+..+ ...+.+..+++++.+++.+||..||++|
T Consensus       357 ~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~R  429 (454)
T 1qcf_A          357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM------SNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEER  429 (454)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhHC
Confidence              2234678999999999999999 88666554      555666555543 3345577899999999999999999999


Q ss_pred             cCHHHHh
Q 039869          137 WTAKHVL  143 (152)
Q Consensus       137 ~~~~~~l  143 (152)
                      |++.+++
T Consensus       430 Pt~~~i~  436 (454)
T 1qcf_A          430 PTFEYIQ  436 (454)
T ss_dssp             CCHHHHH
T ss_pred             cCHHHHH
Confidence            9999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=1.2e-28  Score=171.59  Aligned_cols=133  Identities=14%  Similarity=0.160  Sum_probs=105.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       108 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  184 (281)
T 3cc6_A          108 NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP---ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE  184 (281)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEET---TEEEECCCCGGGCC---------CCCCCGGGCCHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCC---CcEEeCccCCCcccccccccccccCCCCcceeCch
Confidence            458999999999999999999999999999999999999877   45566666521                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||||+++|++++ |+.||...      ........+... .....+..+++.+.+++.+||..+|++
T Consensus       185 ~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~  257 (281)
T 3cc6_A          185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL------ENKDVIGVLEKG-DRLPKPDLCPPVLYTLMTRCWDYDPSD  257 (281)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS------CGGGHHHHHHHT-CCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhccCCCCchhccHHHHHHHHHHHhCCCCCcccC------ChHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHccCCchh
Confidence              22334678999999999999998 88777554      333344444333 234456778999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      ||++.+++++
T Consensus       258 Rps~~ell~~  267 (281)
T 3cc6_A          258 RPRFTELVCS  267 (281)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998753

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.1e-28  Score=172.27  Aligned_cols=133  Identities=20%  Similarity=0.280  Sum_probs=108.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.+||+.|++|+||||+||+++.+   +.++++||+..                        
T Consensus       105 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  181 (287)
T 1u59_A          105 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA  181 (287)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET---TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCC
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCC---CCEEECcccceeeeccCcceeeccccccccccccC
Confidence            568999999999999999999999999999999999999877   56677777622                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|+||+|+++|++++ |..||.+.      ...+....+... ..+..+..+++++.+++..||..+|
T Consensus       182 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p  254 (287)
T 1u59_A          182 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM------KGPEVMAFIEQG-KRMECPPECPPELYALMSDCWIYKW  254 (287)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC------CTHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSG
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC------CHHHHHHHHhcC-CcCCCCCCcCHHHHHHHHHHcCCCh
Confidence                12234668999999999999998 88666554      444555544433 3455678899999999999999999


Q ss_pred             CCCcCHHHHhcC
Q 039869          134 QLRWTAKHVLAH  145 (152)
Q Consensus       134 ~~R~~~~~~l~h  145 (152)
                      ++||++.+++++
T Consensus       255 ~~Rps~~~l~~~  266 (287)
T 1u59_A          255 EDRPDFLTVEQR  266 (287)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999998865

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=1.2e-28  Score=174.88  Aligned_cols=138  Identities=19%  Similarity=0.266  Sum_probs=110.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.+++.++.|++.||.|||++|++||||||+||+++.++....++++|||..                        
T Consensus       135 ~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  214 (327)
T 2yfx_A          135 SSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP  214 (327)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCH
Confidence            34889999999999999999999999999999999999986554455677776622                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||||+++|++++ |..|+.+.      ........+... ..+..+..++..+.+++.+||..||+
T Consensus       215 E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~  287 (327)
T 2yfx_A          215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK------SNQEVLEFVTSG-GRMDPPKNCPGPVYRIMTQCWQHQPE  287 (327)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc------CHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChh
Confidence               12334678999999999999998 77555443      445555554433 34456678999999999999999999


Q ss_pred             CCcCHHHHhcCCC
Q 039869          135 LRWTAKHVLAHPF  147 (152)
Q Consensus       135 ~R~~~~~~l~h~~  147 (152)
                      +||++.+++++.|
T Consensus       288 ~Rps~~~ll~~l~  300 (327)
T 2yfx_A          288 DRPNFAIILERIE  300 (327)
T ss_dssp             GSCCHHHHHHHHH
T ss_pred             hCcCHHHHHHHHH
Confidence            9999999998755

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=1.7e-28  Score=171.88  Aligned_cols=134  Identities=14%  Similarity=0.251  Sum_probs=105.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      +..+++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       122 ~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y  198 (298)
T 3f66_A          122 THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW  198 (298)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---CCEEECSCGGGCCCSCGGGCBC-----CCBCGGG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCC---CCEEECcccccccccccchhccccccCCCCCccc
Confidence            3458899999999999999999999999999999999999877   55667777632                       


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                            .+..++.++|+||+|+++|++++|..|++...     ............ .....+..++..+.+++.+||..+
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~  272 (298)
T 3f66_A          199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQG-RRLLQPEYCPDPLYEVMLKCWHPK  272 (298)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-----CTTTHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-----CHHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHcCCC
Confidence                  22334678999999999999999665665543     333333333322 234456778999999999999999


Q ss_pred             cCCCcCHHHHhc
Q 039869          133 HQLRWTAKHVLA  144 (152)
Q Consensus       133 p~~R~~~~~~l~  144 (152)
                      |++||++.++++
T Consensus       273 p~~Rps~~ell~  284 (298)
T 3f66_A          273 AEMRPSFSELVS  284 (298)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999998864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.95  E-value=2e-28  Score=171.25  Aligned_cols=133  Identities=19%  Similarity=0.278  Sum_probs=107.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                       
T Consensus       111 ~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~  187 (291)
T 1xbb_A          111 NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWY  187 (291)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCSEEEC----CCCGGGC
T ss_pred             CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCC---CcEEEccCCcceeeccCCCcccccccCCCCceee
Confidence            3568999999999999999999999999999999999999877   55667777622                       


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                           .+..++.++|+||||+++|++++ |..|+.+.      ....+...+... ..+..+..++.++.+++.+||..|
T Consensus       188 aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~d  260 (291)
T 1xbb_A          188 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM------KGSEVTAMLEKG-ERMGCPAGCPREMYDLMNLCWTYD  260 (291)
T ss_dssp             CHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCC
Confidence                 12223568999999999999999 88666554      555555555543 345567889999999999999999


Q ss_pred             cCCCcCHHHHhc
Q 039869          133 HQLRWTAKHVLA  144 (152)
Q Consensus       133 p~~R~~~~~~l~  144 (152)
                      |++||++.++++
T Consensus       261 p~~Rps~~~l~~  272 (291)
T 1xbb_A          261 VENRPGFAAVEL  272 (291)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=2.9e-28  Score=172.39  Aligned_cols=133  Identities=17%  Similarity=0.289  Sum_probs=106.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..+..++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       133 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  209 (322)
T 1p4o_A          133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP  209 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT---CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC---CeEEECcCccccccccccccccccCCCCCCCccCh
Confidence            457899999999999999999999999999999999999877   45667776621                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|+||+|+++|++++ |..|+.+.      ........+... .....+..++..+.+++.+||..+|+
T Consensus       210 E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~  282 (322)
T 1p4o_A          210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL------SNEQVLRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNPK  282 (322)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC------CHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence               22335678999999999999999 66555443      445555554433 33456778999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +||++.+++++
T Consensus       283 ~Rps~~e~l~~  293 (322)
T 1p4o_A          283 MRPSFLEIISS  293 (322)
T ss_dssp             GSCCHHHHHHH
T ss_pred             cCcCHHHHHHH
Confidence            99999998854

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.95  E-value=3e-28  Score=186.30  Aligned_cols=133  Identities=18%  Similarity=0.270  Sum_probs=109.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus       463 ~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~  539 (635)
T 4fl3_A          463 NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWY  539 (635)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCTTHHHHTTC-------------CGGGS
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCC---CCEEEEEcCCccccccCccccccccCCCCceeee
Confidence            3568999999999999999999999999999999999999887   55666776622                       


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                           .+..++.++|||||||++|++++ |+.||.+.      ...++...+..+. ....+..++.++.+++..||..|
T Consensus       540 APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~------~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~d  612 (635)
T 4fl3_A          540 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM------KGSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYD  612 (635)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC------CHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCC
Confidence                 12235678999999999999998 88777655      5566666665443 45567889999999999999999


Q ss_pred             cCCCcCHHHHhc
Q 039869          133 HQLRWTAKHVLA  144 (152)
Q Consensus       133 p~~R~~~~~~l~  144 (152)
                      |++||++.++++
T Consensus       613 P~~RPs~~~l~~  624 (635)
T 4fl3_A          613 VENRPGFAAVEL  624 (635)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.95  E-value=1.5e-28  Score=171.52  Aligned_cols=134  Identities=13%  Similarity=0.213  Sum_probs=104.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchh-----HHHHHHHH---------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHE-----AEISAFLQ---------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~-----~~l~~~~~---------------------   57 (152)
                      .+++..++.++.|++.||+|||++|++||||||+||+++.++....     ++++||+.                     
T Consensus       109 ~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~  188 (289)
T 4fvq_A          109 CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC  188 (289)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHH
Confidence            4889999999999999999999999999999999999987743222     66666652                     


Q ss_pred             hhc-CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHG-LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~-~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+ ..++.++|+||+|+++|++++|..+++...     ..........   .....+...+.++.+++.+||..||++|
T Consensus       189 ~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~R  260 (289)
T 4fvq_A          189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQFYE---DRHQLPAPKAAELANLINNCMDYEPDHR  260 (289)
T ss_dssp             HHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHH---TTCCCCCCSSCTTHHHHHHHSCSSGGGS
T ss_pred             hCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHHHhh---ccCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence            122 445778999999999999999776766553     3333333332   2334556778899999999999999999


Q ss_pred             cCHHHHhcC
Q 039869          137 WTAKHVLAH  145 (152)
Q Consensus       137 ~~~~~~l~h  145 (152)
                      |++.+++++
T Consensus       261 ps~~~ll~~  269 (289)
T 4fvq_A          261 PSFRAIIRD  269 (289)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998753

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=3.6e-28  Score=167.72  Aligned_cols=132  Identities=16%  Similarity=0.186  Sum_probs=105.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..+..++.|++.||++||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus        99 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  175 (267)
T 3t9t_A           99 GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE  175 (267)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGG---GCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCC---CCEEEcccccccccccccccccccccccccccChh
Confidence            468999999999999999999999999999999999999876   45666666522                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      ........+... .....+..++..+.+++.+||..+|++
T Consensus       176 ~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~  248 (267)
T 3t9t_A          176 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR------SNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWRERPED  248 (267)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             hhcCCCccchhchhhhHHHHHHHhccCCCCCCCC------CHHHHHHHHhcC-CcCCCCccCcHHHHHHHHHHccCChhh
Confidence              12334678999999999999999 77555443      455555555433 234456778999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       249 Rps~~~ll~  257 (267)
T 3t9t_A          249 RPAFSRLLR  257 (267)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.95  E-value=4.3e-29  Score=179.71  Aligned_cols=135  Identities=16%  Similarity=0.172  Sum_probs=101.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeee--cCCCchhHHHHHHHHh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLV--AGKDAHEAEISAFLQR---------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~--~~~~~~~~~l~~~~~~---------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+||+++  .+   +.++++|||..                     
T Consensus       146 ~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~  222 (364)
T 3op5_A          146 AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP---DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHD  222 (364)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT---TCEEECCCTTCEESSGGGCCCCSSCCSSCCCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC---CeEEEEECCcceecccCCcccccccCcccccC
Confidence            36799999999999999999999999999999999999998  44   56778888733                     


Q ss_pred             -----------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHhcCCCC------CCCCCCChh
Q 039869           59 -----------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAFSSEVP------EFPSNISED  120 (152)
Q Consensus        59 -----------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~  120 (152)
                                 .+..++.++|||||||++|++++|+.||.+...    ........ .......+      ..+..++.+
T Consensus       223 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (364)
T 3op5_A          223 GTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK----DPKYVRDSKIRYRENIASLMDKCFPAANAPGE  298 (364)
T ss_dssp             CCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT----CHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHH
T ss_pred             CCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----CHHHHHHHHHHhhhhHHHHHHHhcccccCHHH
Confidence                       122246789999999999999999978765432    22111111 10000000      012567899


Q ss_pred             HHHHHHHhhccccCCCcCHHHHh
Q 039869          121 GRDFLSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       121 ~~~ll~~~l~~~p~~R~~~~~~l  143 (152)
                      +.+++..||..+|++||++.+++
T Consensus       299 ~~~li~~cl~~~p~~RP~~~~l~  321 (364)
T 3op5_A          299 IAKYMETVKLLDYTEKPLYENLR  321 (364)
T ss_dssp             HHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHH
Confidence            99999999999999999999876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.95  E-value=2.3e-28  Score=180.47  Aligned_cols=131  Identities=15%  Similarity=0.217  Sum_probs=106.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hhcC
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RHGL   61 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~~~   61 (152)
                      .+++..++.++.|++.||+|||+++++||||||+||+++.+   +.++++|||.                      ..+.
T Consensus       285 ~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~  361 (450)
T 1k9a_A          285 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK  361 (450)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---SCEEECCCTTCEECC------CCCTTTSCHHHHHSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCC---CCEEEeeCCCcccccccccCCCCCcceeCHHHhcCC
Confidence            47899999999999999999999999999999999999877   5667777762                      2234


Q ss_pred             CCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHH
Q 039869           62 LLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK  140 (152)
Q Consensus        62 ~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~  140 (152)
                      .++.++||||||+++|++++ |..|+.+.      ...++...+..+ .....|..+++++.+++.+||..||++||++.
T Consensus       362 ~~~~~sDvwslG~~l~el~t~g~~P~~~~------~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~  434 (450)
T 1k9a_A          362 KFSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDVVPRVEKG-YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFL  434 (450)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTS------CTTTHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHH
Confidence            45788999999999999998 88666554      333444444433 34556788999999999999999999999999


Q ss_pred             HHhc
Q 039869          141 HVLA  144 (152)
Q Consensus       141 ~~l~  144 (152)
                      ++++
T Consensus       435 ~l~~  438 (450)
T 1k9a_A          435 QLRE  438 (450)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=5.9e-29  Score=182.87  Aligned_cols=136  Identities=22%  Similarity=0.272  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC----------CchhHHHHHHHHh-------------------
Q 039869            8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK----------DAHEAEISAFLQR-------------------   58 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~----------~~~~~~l~~~~~~-------------------   58 (152)
                      ..++.++.||+.||+|||++||+||||||+||+++..+          ....++++|||..                   
T Consensus       115 ~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~g  194 (434)
T 2rio_A          115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG  194 (434)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------
T ss_pred             hhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCC
Confidence            34678999999999999999999999999999997542          1234566666511                   


Q ss_pred             ----------h-------cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCC----CCC
Q 039869           59 ----------H-------GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEF----PSN  116 (152)
Q Consensus        59 ----------~-------~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  116 (152)
                                .       +..++.++||||+||++|++++ |..||.+..     .. . ..........+..    +..
T Consensus       195 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-----~~-~-~~i~~~~~~~~~~~~~~~~~  267 (434)
T 2rio_A          195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY-----SR-E-SNIIRGIFSLDEMKCLHDRS  267 (434)
T ss_dssp             CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT-----TH-H-HHHHHTCCCCCCCTTCCCHH
T ss_pred             CCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch-----hh-H-HHHhcCCCCccccccccccc
Confidence                      1       1335678999999999999999 775654432     11 1 1111111111111    123


Q ss_pred             CChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          117 ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       117 ~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ++.++.+++.+||..||++||++.++++||||+.
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            4578999999999999999999999999999974

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.4e-28  Score=177.82  Aligned_cols=133  Identities=14%  Similarity=0.255  Sum_probs=102.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.++..++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                        
T Consensus       187 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~  263 (373)
T 3c1x_A          187 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM  263 (373)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECCC---------------------CCGGGS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCC---CCEEEeeccccccccccccccccccCCCCCccccc
Confidence            457899999999999999999999999999999999999877   45566666522                        


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                           .+..++.++|+||||+++|+++++..|++...     ...+....+..+. ....+..++..+.+++.+||..+|
T Consensus       264 aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-----~~~~~~~~~~~~~-~~~~p~~~~~~l~~li~~cl~~dp  337 (373)
T 3c1x_A          264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQGR-RLLQPEYCPDPLYEVMLKCWHPKA  337 (373)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CSSCHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             ChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-----CHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCh
Confidence                 12334678999999999999999554555433     2222333333322 344567899999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       338 ~~RPs~~ell~  348 (373)
T 3c1x_A          338 EMRPSFSELVS  348 (373)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=2.3e-28  Score=173.99  Aligned_cols=131  Identities=19%  Similarity=0.312  Sum_probs=106.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      .+++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++|||..                         
T Consensus       153 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  229 (334)
T 2pvf_A          153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE  229 (334)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC---CCEEEccccccccccccccccccCCCCcccceeChH
Confidence            48999999999999999999999999999999999999877   56677777622                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      ...++...+.... ....+..++.++.+++.+||..+|++
T Consensus       230 ~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~  302 (334)
T 2pvf_A          230 ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------PVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQ  302 (334)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC------CHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhh
Confidence              12224678999999999999999 88666544      4555555554433 44567789999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       303 Rps~~ell~  311 (334)
T 2pvf_A          303 RPTFKQLVE  311 (334)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=4.4e-29  Score=185.57  Aligned_cols=139  Identities=16%  Similarity=0.204  Sum_probs=104.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+|||++.....+.++|+|||..                       
T Consensus        97 ~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt  176 (483)
T 3sv0_A           97 SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT  176 (483)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCC
Confidence            457999999999999999999999999999999999999953222366778888732                       


Q ss_pred             ---------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH---HhcCCCCCCCCCCChhHHHHHH
Q 039869           59 ---------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDFLS  126 (152)
Q Consensus        59 ---------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~  126 (152)
                               .+..++.++|||||||++|+|++|+.||.+....   ........+   ........++..++.++.+++.
T Consensus       177 ~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~  253 (483)
T 3sv0_A          177 ARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG---TKKQKYEKISEKKVATSIEALCRGYPTEFASYFH  253 (483)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS---SHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHH
T ss_pred             ccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch---hHHHHHHHHhhccccccHHHHhcCCcHHHHHHHH
Confidence                     1222356789999999999999999787664321   222222221   1112222334678999999999


Q ss_pred             HhhccccCCCcCHHHHh
Q 039869          127 KCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       127 ~~l~~~p~~R~~~~~~l  143 (152)
                      .||..+|++||++.+++
T Consensus       254 ~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          254 YCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             HHHTCCTTCCCCHHHHH
T ss_pred             HHhcCChhhCcCHHHHH
Confidence            99999999999998765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.95  E-value=4.8e-29  Score=178.31  Aligned_cols=136  Identities=15%  Similarity=0.133  Sum_probs=101.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.||+.||+|||++|++||||||+||+++.++. ..++++|||..                        
T Consensus       146 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~  224 (345)
T 2v62_A          146 GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP-DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTI  224 (345)
T ss_dssp             GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST-TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC-CcEEEEeCCCceecccccccccchhccccccCCCc
Confidence            36899999999999999999999999999999999999986631 26677777633                        


Q ss_pred             --------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCCCC------CCCCCChhHHH
Q 039869           59 --------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEVPE------FPSNISEDGRD  123 (152)
Q Consensus        59 --------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~  123 (152)
                              .+..++.++|||||||++|++++|..||.+...    ......... ......+.      ....++.++.+
T Consensus       225 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  300 (345)
T 2v62_A          225 EFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----DPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQ  300 (345)
T ss_dssp             TTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT----CHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHH
T ss_pred             cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----ccHHHHHHHHhhcccccHHHHhhccccccHHHHHH
Confidence                    122346789999999999999999977755321    222222111 11111111      11278899999


Q ss_pred             HHHHhhccccCCCcCHHHHh
Q 039869          124 FLSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       124 ll~~~l~~~p~~R~~~~~~l  143 (152)
                      ++..||..||++||++.+++
T Consensus       301 li~~~l~~dp~~Rps~~~l~  320 (345)
T 2v62_A          301 FLVCAHSLAYDEKPNYQALK  320 (345)
T ss_dssp             HHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHhhcCcccCCCHHHHH
Confidence            99999999999999999876

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=7.4e-29  Score=175.48  Aligned_cols=141  Identities=19%  Similarity=0.296  Sum_probs=102.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC-CCchhHHHHHHHHh------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-KDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~-~~~~~~~l~~~~~~------------------------   58 (152)
                      .+++.+++.++.|++.||+|||++|++||||||+||++..+ .....++++|||..                        
T Consensus       108 ~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  187 (319)
T 4euu_A          108 GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY  187 (319)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHh
Confidence            38999999999999999999999999999999999998211 11255677777621                        


Q ss_pred             h--------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC-------------------
Q 039869           59 H--------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP-------------------  111 (152)
Q Consensus        59 ~--------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  111 (152)
                      .        +..++.++||||+||++|++++|..||......  .........+.......                   
T Consensus       188 ~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  265 (319)
T 4euu_A          188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP--RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDM  265 (319)
T ss_dssp             HHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG--GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSC
T ss_pred             hhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc--chhHHHHHHHhcCCCcccchhhhcccCCccccCccC
Confidence            1        345567899999999999999999777543211  12223333332222110                   


Q ss_pred             ----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCC
Q 039869          112 ----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHP  146 (152)
Q Consensus       112 ----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~  146 (152)
                          .++..++..+.+++.+||..||++||++.++++||
T Consensus       266 ~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          266 PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             CTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             CcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence                11223455788999999999999999999999886

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=3.7e-28  Score=179.45  Aligned_cols=132  Identities=18%  Similarity=0.250  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +.+++.++..++.|++.||+|||++|++||||||+||+++.+   ..++++|||.                         
T Consensus       275 ~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE  351 (452)
T 1fmk_A          275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE  351 (452)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCCTTC--------------CCGGGSCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCC---CCEEECCCccceecCCCceecccCCcccccccCHh
Confidence            458899999999999999999999999999999999999876   4556666652                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++||||||+++|++++ |..|+.+.      ...++...+..+ ...+.+..+++.+.+++.+||..+|++
T Consensus       352 ~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~  424 (452)
T 1fmk_A          352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------VNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEE  424 (452)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC------CHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhh
Confidence             122335678999999999999999 77666554      555666655543 344567789999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       425 Rpt~~~l~~  433 (452)
T 1fmk_A          425 RPTFEYLQA  433 (452)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999998863

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.95  E-value=3e-28  Score=176.06  Aligned_cols=132  Identities=17%  Similarity=0.266  Sum_probs=103.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       142 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~a  218 (373)
T 2qol_A          142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS  218 (373)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECCC----------------------CTTSC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCC---CCEEECcCccccccccCCccceeccCCCcCCCccC
Confidence            468999999999999999999999999999999999999877   4555665551                         


Q ss_pred             ---hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           58 ---RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        58 ---~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                         ..+..++.++||||||+++|++++ |..|+...      ....+...+.... ..+.+..++.++.+++..||..+|
T Consensus       219 PE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~------~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~dp  291 (373)
T 2qol_A          219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM------SNQDVIKAVDEGY-RLPPPMDCPAALYQLMLDCWQKDR  291 (373)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC------CHHHHHHHHHTTE-ECCCCTTCBHHHHHHHHHHTCSSG
T ss_pred             hhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHhCcCh
Confidence               112334678999999999999998 88777654      4555555554332 334566789999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       292 ~~RPs~~~i~~  302 (373)
T 2qol_A          292 NNRPKFEQIVS  302 (373)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999998763

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=3e-28  Score=170.53  Aligned_cols=137  Identities=16%  Similarity=0.253  Sum_probs=103.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH---------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL---------------------------   56 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~---------------------------   56 (152)
                      ++++.+++.++.|++.||+|||+.|++||||||+||+++.+   +.++++|||                           
T Consensus       110 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  186 (295)
T 3ugc_A          110 RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP  186 (295)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCCCSCC-------------CTTCGGGGCCH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCC---CeEEEccCcccccccCCcceeeeccCCCCccceeCc
Confidence            48899999999999999999999999999999999999877   455566654                           


Q ss_pred             -HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccC-------CCCCChH---HHHHHHHhcCCCCCCCCCCChhHHHHH
Q 039869           57 -QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFG-------RGLASRD---DLLELIAFSSEVPEFPSNISEDGRDFL  125 (152)
Q Consensus        57 -~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll  125 (152)
                       ...+..++.++||||+|+++|++++|..|+.....       .......   ....... .....+.+..+++++.+++
T Consensus       187 E~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li  265 (295)
T 3ugc_A          187 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIM  265 (295)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred             HHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh-ccCcCCCCcCcCHHHHHHH
Confidence             12233457789999999999999999866543211       0000111   1122222 2334556788999999999


Q ss_pred             HHhhccccCCCcCHHHHhc
Q 039869          126 SKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~~~l~  144 (152)
                      ..||..||++||++.++++
T Consensus       266 ~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          266 TECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHSCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhhCCCHHHHHH
Confidence            9999999999999999874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=6e-29  Score=176.76  Aligned_cols=139  Identities=13%  Similarity=0.109  Sum_probs=102.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCc--hhHHHHHHHHhh--------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA--HEAEISAFLQRH--------------------   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~--~~~~l~~~~~~~--------------------   59 (152)
                      ++++++..++.++.|++.||+|||++|++||||||+||+++.++..  ..++++|||...                    
T Consensus        99 ~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~  178 (330)
T 2izr_A           99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT  178 (330)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcC
Confidence            4679999999999999999999999999999999999999876321  127788887321                    


Q ss_pred             ------------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC---CCCCCCCCCChhHHHH
Q 039869           60 ------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS---EVPEFPSNISEDGRDF  124 (152)
Q Consensus        60 ------------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l  124 (152)
                                  +..++.++|+||||+++|++++|..||.+...   ....+....+....   ........++ ++.++
T Consensus       179 gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~l  254 (330)
T 2izr_A          179 GTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA---DTLKERYQKIGDTKRATPIEVLCENFP-EMATY  254 (330)
T ss_dssp             SCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC---SSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHH
T ss_pred             CCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc---ccHHHHHHHHHhhhccCCHHHHhccCh-HHHHH
Confidence                        22246689999999999999999977766421   12233333221111   1111223345 99999


Q ss_pred             HHHhhccccCCCcCHHHHhc
Q 039869          125 LSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~  144 (152)
                      +..||..+|.+||++.++++
T Consensus       255 i~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          255 LRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999988763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=5e-28  Score=172.37  Aligned_cols=132  Identities=17%  Similarity=0.248  Sum_probs=106.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH--------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL--------------------------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~--------------------------   56 (152)
                      +.+++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||                          
T Consensus       142 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  218 (333)
T 1mqb_A          142 GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA  218 (333)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECCCCC-----------------CCCGGGSC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCC---CcEEECCCCcchhhccccccccccCCCCccccccC
Confidence            568999999999999999999999999999999999999876   445555554                          


Q ss_pred             --HhhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           57 --QRHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        57 --~~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                        ...+..++.++|+||||+++|++++ |..||.+.      ....+...+... .....+..++..+.+++.+||..+|
T Consensus       219 PE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p  291 (333)
T 1mqb_A          219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL------SNHEVMKAINDG-FRLPTPMDCPSAIYQLMMQCWQQER  291 (333)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTT-CCCCCCTTCBHHHHHHHHHHTCSST
T ss_pred             chhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC------CHHHHHHHHHCC-CcCCCcccCCHHHHHHHHHHcCCCh
Confidence              1123345678999999999999998 88676554      555555555443 2344567889999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       292 ~~Rps~~~l~~  302 (333)
T 1mqb_A          292 ARRPKFADIVS  302 (333)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999998864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.95  E-value=2.4e-28  Score=172.98  Aligned_cols=139  Identities=18%  Similarity=0.171  Sum_probs=104.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                         
T Consensus       135 ~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE  211 (321)
T 2qkw_B          135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN---FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPE  211 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTT---CCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCC---CCEEEeecccccccccccccccccccCCCccccCHH
Confidence            58999999999999999999999999999999999999877   56677777632                         


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC---------CCCCCCCCChhHHHHHHH
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE---------VPEFPSNISEDGRDFLSK  127 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ll~~  127 (152)
                        .+..++.++|+||+|+++|++++|+.||.+.....................         ....+...+..+.+++.+
T Consensus       212 ~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  291 (321)
T 2qkw_B          212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVK  291 (321)
T ss_dssp             HHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHH
T ss_pred             HhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHH
Confidence              123346789999999999999999988877655443333322211111110         111223345678999999


Q ss_pred             hhccccCCCcCHHHHhcC
Q 039869          128 CFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       128 ~l~~~p~~R~~~~~~l~h  145 (152)
                      ||..||++||++.+++++
T Consensus       292 ~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          292 CLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCcccCcCHHHHHHH
Confidence            999999999999998864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.95  E-value=4.6e-28  Score=184.69  Aligned_cols=131  Identities=19%  Similarity=0.274  Sum_probs=107.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.+++.++.||+.||+|||+++|+||||||+||+++.+   +.++++|||..                        
T Consensus       431 ~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~A  507 (613)
T 2ozo_A          431 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA  507 (613)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCCSTTTTCC--------------CCTTSC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCC---CcEEEeeccCcccccCCCceeeeccCCCCccceeC
Confidence            468999999999999999999999999999999999999877   55666666522                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++|||||||++||+++ |+.||.+.      ...++...+..+. ....+..++.++.+++..||..+|
T Consensus       508 PE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~------~~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~dP  580 (613)
T 2ozo_A          508 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM------KGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIYKW  580 (613)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSST
T ss_pred             HhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------CHHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCCCh
Confidence                12335678999999999999998 88776654      4455666555443 455678899999999999999999


Q ss_pred             CCCcCHHHHh
Q 039869          134 QLRWTAKHVL  143 (152)
Q Consensus       134 ~~R~~~~~~l  143 (152)
                      ++||++.+++
T Consensus       581 ~~RPs~~~l~  590 (613)
T 2ozo_A          581 EDRPDFLTVE  590 (613)
T ss_dssp             TTSCCHHHHH
T ss_pred             hHCcCHHHHH
Confidence            9999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=3.4e-28  Score=181.40  Aligned_cols=132  Identities=15%  Similarity=0.200  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      ..+++..+..++.||+.||+|||+++|+||||||+||+++.+   +.++++|||...                       
T Consensus       313 ~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE  389 (495)
T 1opk_A          313 QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE  389 (495)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCC---CcEEEeecccceeccCCceeecCCCcCCcceeCHh
Confidence            458899999999999999999999999999999999999877   667888887221                       


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         +..++.++||||||+++|++++ |..|+.+.      +...+...+.. ......+..++.++.+++.+||..||++
T Consensus       390 ~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~  462 (495)
T 1opk_A          390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSD  462 (495)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC------CGGGHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCcChhH
Confidence               1223668999999999999999 77666554      44444444443 3345567889999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       463 RPs~~el~~  471 (495)
T 1opk_A          463 RPSFAEIHQ  471 (495)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999863

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=7.2e-28  Score=170.11  Aligned_cols=132  Identities=17%  Similarity=0.263  Sum_probs=104.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.+++.++.|++.||+|||++|++|+||||+||+++ +   +.++++||+.                         
T Consensus       125 ~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y  200 (319)
T 2y4i_B          125 IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-N---GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCH  200 (319)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC----------CCSCBCCSGGGGT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-C---CCEEEeecCCccccccccccccccccccCCCcccc
Confidence            3689999999999999999999999999999999999997 3   3455666652                         


Q ss_pred             -----hh---------cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHH
Q 039869           58 -----RH---------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRD  123 (152)
Q Consensus        58 -----~~---------~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (152)
                           ..         +..++.++||||||+++|++++|..||.+.      ........+.........+..++.++.+
T Consensus       201 ~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~  274 (319)
T 2y4i_B          201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ------PAEAIIWQMGTGMKPNLSQIGMGKEISD  274 (319)
T ss_dssp             SCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC------CHHHHHHHHHTTCCCCCCCSSCCTTHHH
T ss_pred             cChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHhccCCCCCCCcCCCCHHHHH
Confidence                 00         122466899999999999999999777554      5555555555444444444578899999


Q ss_pred             HHHHhhccccCCCcCHHHHhc
Q 039869          124 FLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       124 ll~~~l~~~p~~R~~~~~~l~  144 (152)
                      ++.+||..+|++||++.++++
T Consensus       275 li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          275 ILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999999874

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=1.4e-28  Score=174.53  Aligned_cols=138  Identities=19%  Similarity=0.285  Sum_probs=106.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++|||...                       
T Consensus       122 ~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  198 (327)
T 3lxl_A          122 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA  198 (327)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCC---CCEEEcccccceecccCCccceeeccCCccccccC
Confidence            358999999999999999999999999999999999999877   567788887321                       


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCC---------CCCChHHHHHHHHhcCCCCCCCCCCChhHHHHH
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGR---------GLASRDDLLELIAFSSEVPEFPSNISEDGRDFL  125 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  125 (152)
                           +..++.++|+||+|+++|++++|..|+......         ............. .......+..+++++.+++
T Consensus       199 PE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li  277 (327)
T 3lxl_A          199 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE-EGQRLPAPPACPAEVHELM  277 (327)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred             HHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh-cccCCCCCCcccHHHHHHH
Confidence                 122356899999999999999999777543210         0011122223333 3344556788999999999


Q ss_pred             HHhhccccCCCcCHHHHhc
Q 039869          126 SKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~~~l~  144 (152)
                      .+||..||++||++.++++
T Consensus       278 ~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          278 KLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHH
Confidence            9999999999999999853

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=4.7e-28  Score=168.87  Aligned_cols=132  Identities=16%  Similarity=0.203  Sum_probs=105.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       106 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  182 (288)
T 3kfa_A          106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE  182 (288)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGG---GCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHH
T ss_pred             CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCC---CCEEEccCccceeccCCccccccCCccccCcCChh
Confidence            458999999999999999999999999999999999999876   55667776622                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++|+||+|+++|++++ |..|+.+.      +.......+.. ......+..+++.+.+++..||..||++
T Consensus       183 ~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~  255 (288)
T 3kfa_A          183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSD  255 (288)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CGGGHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhc-cCCCCCCCCCCHHHHHHHHHHhCCChhh
Confidence              22334678999999999999999 77555443      34444444433 3344567789999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       256 Rps~~~~~~  264 (288)
T 3kfa_A          256 RPSFAEIHQ  264 (288)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=2e-28  Score=171.67  Aligned_cols=139  Identities=20%  Similarity=0.295  Sum_probs=103.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH--------hCCCccCCCCCCCeeeecCCCchhHHHHHHHHh---------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIH--------SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR---------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh--------~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~---------------   58 (152)
                      ..++++..++.++.|++.||+|||        +.+++||||||+||+++.+   +.++++|||..               
T Consensus        99 ~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~  175 (301)
T 3q4u_A           99 LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN---GQCCIADLGLAVMHSQSTNQLDVGNN  175 (301)
T ss_dssp             TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEEECCCC
T ss_pred             hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC---CCEEEeeCCCeeeccccccccccccc
Confidence            356899999999999999999999        9999999999999999877   56777888732               


Q ss_pred             --hcC------------------CCCcchhHHHHHHHHHHHHhc----------CcccCCccCCCCCChHHHHHHHHhcC
Q 039869           59 --HGL------------------LLIYHVDTWALGRVFVEMMTA----------EISAWGSFGRGLASRDDLLELIAFSS  108 (152)
Q Consensus        59 --~~~------------------~~~~~~DvwslG~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (152)
                        .|.                  .++.++||||+|+++|++++|          ..||..... ................
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~-~~~~~~~~~~~~~~~~  254 (301)
T 3q4u_A          176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP-NDPSFEDMRKVVCVDQ  254 (301)
T ss_dssp             CCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC-SSCCHHHHHHHHTTSC
T ss_pred             ccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC-CCcchhhhhHHHhccC
Confidence              011                  122579999999999999999          655544332 1122333444343333


Q ss_pred             CCCCCCC-----CCChhHHHHHHHhhccccCCCcCHHHHhc
Q 039869          109 EVPEFPS-----NISEDGRDFLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       109 ~~~~~~~-----~~~~~~~~ll~~~l~~~p~~R~~~~~~l~  144 (152)
                      ..+..+.     ..+.++.+++.+||..||++||++.++++
T Consensus       255 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          255 QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            3343332     24567999999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=3.6e-28  Score=170.50  Aligned_cols=138  Identities=19%  Similarity=0.301  Sum_probs=104.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++|||..                        
T Consensus       121 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  197 (302)
T 4e5w_A          121 NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYA  197 (302)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCC
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCC---CCEEECcccccccccCCCcceeccCCCCCCccccC
Confidence            468999999999999999999999999999999999999877   56777777632                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccC--------C-CCCChHHHHHHHHhcCCCCCCCCCCChhHHHHH
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFG--------R-GLASRDDLLELIAFSSEVPEFPSNISEDGRDFL  125 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  125 (152)
                          .+..++.++|+||+|+++|++++|..|+.....        . ............. .......+..+++++.+++
T Consensus       198 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li  276 (302)
T 4e5w_A          198 PECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK-EGKRLPCPPNCPDEVYQLM  276 (302)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred             CeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh-ccCCCCCCCCCCHHHHHHH
Confidence                122235679999999999999999865432210        0 0001122222233 3334556788999999999


Q ss_pred             HHhhccccCCCcCHHHHhc
Q 039869          126 SKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~~~l~  144 (152)
                      .+||..||++||++.++++
T Consensus       277 ~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          277 RKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHTTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCCCCCCCCHHHHHH
Confidence            9999999999999999874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.95  E-value=6.4e-28  Score=170.01  Aligned_cols=135  Identities=17%  Similarity=0.196  Sum_probs=103.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.++..++.|++.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus       102 ~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~  178 (310)
T 3s95_A          102 DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVREN---KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK  178 (310)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTT---SCEEECCCTTCEECC-------------------
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCC---CCEEEeecccceeccccccccccccccccccccc
Confidence            4578999999999999999999999999999999999999877   45566666522                       


Q ss_pred             ----------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHH
Q 039869           59 ----------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGR  122 (152)
Q Consensus        59 ----------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (152)
                                      .+..++.++||||+|+++|++++|..|+...................     ...+..+++++.
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~  253 (310)
T 3s95_A          179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD-----RYCPPNCPPSFF  253 (310)
T ss_dssp             -CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH-----HTCCTTCCTTHH
T ss_pred             ccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc-----ccCCCCCCHHHH
Confidence                            23345778999999999999999996665543322211111111111     123567889999


Q ss_pred             HHHHHhhccccCCCcCHHHHhc
Q 039869          123 DFLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       123 ~ll~~~l~~~p~~R~~~~~~l~  144 (152)
                      +++.+||..||++||++.++++
T Consensus       254 ~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          254 PITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999998864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=7e-28  Score=167.39  Aligned_cols=131  Identities=18%  Similarity=0.254  Sum_probs=105.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++.++..++.|++.||++||++|++|+||||+||+++.+   +.++++||+..                         
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  181 (279)
T 1qpc_A          105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA  181 (279)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCC---CCEEECCCcccccccCcccccccCCCCccCccChhh
Confidence            58899999999999999999999999999999999999877   56677777622                         


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       .+..++.++|+||+|+++|++++ |..|+.+.      ...+....+... .....+..++.++.+++.+||..+|++|
T Consensus       182 ~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R  254 (279)
T 1qpc_A          182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDR  254 (279)
T ss_dssp             HHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hccCCCCchhhhHHHHHHHHHHHhCCCCCCccc------CHHHHHHHHhcc-cCCCCcccccHHHHHHHHHHhccChhhC
Confidence             11223567999999999999999 77666543      445555555433 3345567899999999999999999999


Q ss_pred             cCHHHHhc
Q 039869          137 WTAKHVLA  144 (152)
Q Consensus       137 ~~~~~~l~  144 (152)
                      |++.++++
T Consensus       255 ps~~~l~~  262 (279)
T 1qpc_A          255 PTFDYLRS  262 (279)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99998763

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=7e-28  Score=167.40  Aligned_cols=130  Identities=14%  Similarity=0.229  Sum_probs=103.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------hhcCC
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------RHGLL   62 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~~~~~   62 (152)
                      +++..++.++.|++.||++||++|++|+||||+||+++.+   +.++++||+.                      ..+..
T Consensus       114 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~  190 (278)
T 1byg_A          114 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK  190 (278)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC------------CCTTTSCHHHHHHCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCC---CcEEEeeccccccccccccCCCccccccCHHHhCCCC
Confidence            7888999999999999999999999999999999999877   4555666541                      12334


Q ss_pred             CCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHH
Q 039869           63 LIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH  141 (152)
Q Consensus        63 ~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~  141 (152)
                      ++.++|+||+|+++|++++ |..|+...      ........+... ..+..+..+++.+.+++.+||..||++||++.+
T Consensus       191 ~~~~~Di~slG~il~~l~t~g~~p~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  263 (278)
T 1byg_A          191 FSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ  263 (278)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSCTTS------CGGGHHHHHTTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCchhcHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHhcC-CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHH
Confidence            5778999999999999998 88666543      334444444332 345567789999999999999999999999998


Q ss_pred             Hhc
Q 039869          142 VLA  144 (152)
Q Consensus       142 ~l~  144 (152)
                      +++
T Consensus       264 l~~  266 (278)
T 1byg_A          264 LRE  266 (278)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=4.4e-28  Score=169.95  Aligned_cols=132  Identities=20%  Similarity=0.235  Sum_probs=100.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++..++.++.|++.||+|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       106 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE  182 (294)
T 4eqm_A          106 GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSN---KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE  182 (294)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEECCCSSSTTC-------------CCSSCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---CCEEEEeCCCccccccccccccCccccCccccCHh
Confidence            468999999999999999999999999999999999999877   4556666651                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC---CCCCCCCChhHHHHHHHhhcccc
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV---PEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                       ..+..++.++|+||+|+++|++++|+.||.+.      ...............   ...+..+++.+.+++.+||..||
T Consensus       183 ~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  256 (294)
T 4eqm_A          183 QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE------TAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDK  256 (294)
T ss_dssp             HHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS------CHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSG
T ss_pred             HhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCH
Confidence             22333467899999999999999999777665      333333222222211   12456789999999999999999


Q ss_pred             CCCcCHHHHh
Q 039869          134 QLRWTAKHVL  143 (152)
Q Consensus       134 ~~R~~~~~~l  143 (152)
                      ++||+..+.+
T Consensus       257 ~~R~~~~~~l  266 (294)
T 4eqm_A          257 ANRYKTIQEM  266 (294)
T ss_dssp             GGSCSSHHHH
T ss_pred             hHccccHHHH
Confidence            9999444433

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=5.4e-28  Score=173.23  Aligned_cols=136  Identities=13%  Similarity=0.172  Sum_probs=103.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||+|||++|++||||||+||+++.++. ..++++|||..                        
T Consensus       154 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~  232 (352)
T 2jii_A          154 HVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQ-SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDL  232 (352)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEE-EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCC-ceEEEecCcceeeccCCCccccccccccccccCCc
Confidence            57999999999999999999999999999999999999987621 16778888743                        


Q ss_pred             --------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH-hcCCCCCCC------CCCChhHHH
Q 039869           59 --------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA-FSSEVPEFP------SNISEDGRD  123 (152)
Q Consensus        59 --------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~  123 (152)
                              .+..++.++|+||||+++|++++|+.||.+...    ....+..... .......++      ..++.++.+
T Consensus       233 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  308 (352)
T 2jii_A          233 EFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP----NTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQK  308 (352)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT----CHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHH
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc----CHHHHHHHHHhccCChhhhhhhccccCCCcHHHHH
Confidence                    122346689999999999999999977766531    2222322221 111222222      246899999


Q ss_pred             HHHHhhccccCCCcCHHHHh
Q 039869          124 FLSKCFIRVHQLRWTAKHVL  143 (152)
Q Consensus       124 ll~~~l~~~p~~R~~~~~~l  143 (152)
                      ++.+||..||++||++.+++
T Consensus       309 li~~~l~~dp~~Rps~~~l~  328 (352)
T 2jii_A          309 YLKVVMALTYEEKPPYAMLR  328 (352)
T ss_dssp             HHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHHhCChhhCCCHHHHH
Confidence            99999999999999999876

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=1e-27  Score=180.31  Aligned_cols=132  Identities=18%  Similarity=0.250  Sum_probs=107.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++.++..++.||+.||+|||+++|+||||||+|||++.+   ..++++|||..                        
T Consensus       358 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE  434 (535)
T 2h8h_A          358 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE  434 (535)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCC---CcEEEcccccceecCCCceecccCCcCcccccCHH
Confidence            458899999999999999999999999999999999999876   56677777622                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        .+..++.++||||||+++|++++ |..||.+.      ...++...+..+ .....+..++.++.+++.+||..||++
T Consensus       435 ~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~  507 (535)
T 2h8h_A          435 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM------VNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEE  507 (535)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhH
Confidence              12234678999999999999999 77666554      555666665543 334566789999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       508 RPt~~~l~~  516 (535)
T 2h8h_A          508 RPTFEYLQA  516 (535)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999998864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.7e-27  Score=167.87  Aligned_cols=134  Identities=18%  Similarity=0.243  Sum_probs=104.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------h
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHS---HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------R   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~---~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~   58 (152)
                      .+++..+..++.|++.||+|||+   +|++||||||+||+++.++.  .++++|||.                      .
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~--~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~  175 (307)
T 2eva_A           98 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT--VLKICDFGTACDIQTHMTNNKGSAAWMAPEVF  175 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT--EEEECCCCC------------CCTTSSCHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC--EEEEcccccccccccccccCCCCCceEChhhh
Confidence            36889999999999999999999   89999999999999986632  246666652                      2


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++||||+|+++|++++|+.||.....    .......... ....+..+..++..+.+++.+||..||++||+
T Consensus       176 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  250 (307)
T 2eva_A          176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG----PAFRIMWAVH-NGTRPPLIKNLPKPIESLMTRCWSKDPSQRPS  250 (307)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS----SHHHHHHHHH-TTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc----cHHHHHHHHh-cCCCCCcccccCHHHHHHHHHHhcCChhhCcC
Confidence            234457889999999999999999977754321    2223333333 23345566789999999999999999999999


Q ss_pred             HHHHhc
Q 039869          139 AKHVLA  144 (152)
Q Consensus       139 ~~~~l~  144 (152)
                      +.++++
T Consensus       251 ~~ell~  256 (307)
T 2eva_A          251 MEEIVK  256 (307)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=4.6e-28  Score=171.96  Aligned_cols=131  Identities=13%  Similarity=0.123  Sum_probs=99.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeecCCCchhHHHHHHHHh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKDAHEAEISAFLQR---------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~---------------------   58 (152)
                      ++++++.+++.++.|++.||+|||+.|  ++|+||||+||+++.+   +.++++||+..                     
T Consensus       130 ~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  206 (337)
T 3ll6_A          130 RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEE  206 (337)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTT---SCEEBCCCTTCBCCSSCC--------------
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCC---CCEEEecCccceeccccCcccccccccccchh
Confidence            356999999999999999999999999  9999999999999876   45566666521                     


Q ss_pred             -------------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCCh
Q 039869           59 -------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISE  119 (152)
Q Consensus        59 -------------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (152)
                                         .+..++.++||||||+++|++++|+.||....      ...+.    ........+...+.
T Consensus       207 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------~~~~~----~~~~~~~~~~~~~~  276 (337)
T 3ll6_A          207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA------KLRIV----NGKYSIPPHDTQYT  276 (337)
T ss_dssp             -----------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------------CCCCTTCCSSG
T ss_pred             hccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh------HHHhh----cCcccCCcccccch
Confidence                               23334668999999999999999997775432      11111    11222334466788


Q ss_pred             hHHHHHHHhhccccCCCcCHHHHhcC
Q 039869          120 DGRDFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       120 ~~~~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      .+.+++.+||..||++||++.+++++
T Consensus       277 ~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          277 VFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             GGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            89999999999999999999998864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=7.9e-28  Score=171.07  Aligned_cols=145  Identities=20%  Similarity=0.281  Sum_probs=105.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC---------CCccCCCCCCCeeeecCCCchhHHHHHHHHhh--------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH---------GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH--------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~---------~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~--------------   59 (152)
                      .++++..++.++.|++.||+|||+.         |++||||||+||+++.+   +.++++|||...              
T Consensus       106 ~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~  182 (336)
T 3g2f_A          106 HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND---GTCVISDFGLSMRLTGNRLVRPGEED  182 (336)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT---SCEEECCCTTCEECSSSSCC------
T ss_pred             cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC---CcEEEeeccceeecccccccCccccc
Confidence            3457889999999999999999999         99999999999999877   566777776331              


Q ss_pred             -------c-------------------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC------------CChHHHH
Q 039869           60 -------G-------------------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL------------ASRDDLL  101 (152)
Q Consensus        60 -------~-------------------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~------------~~~~~~~  101 (152)
                             |                   ..++.++|||||||++|++++|..|++.......            .......
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (336)
T 3g2f_A          183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQ  262 (336)
T ss_dssp             ---CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHH
T ss_pred             cccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHH
Confidence                   1                   1123468999999999999999877765433211            1122233


Q ss_pred             HHHHhcCCCCCCCCCC------ChhHHHHHHHhhccccCCCcCHHHH------hcCCCCCC
Q 039869          102 ELIAFSSEVPEFPSNI------SEDGRDFLSKCFIRVHQLRWTAKHV------LAHPFPSV  150 (152)
Q Consensus       102 ~~~~~~~~~~~~~~~~------~~~~~~ll~~~l~~~p~~R~~~~~~------l~h~~~~~  150 (152)
                      .........+.++..+      +.++.+++.+||..||++||++.++      +.++|-++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          263 VLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             HHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             hhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            3333334444454443      3479999999999999999999998      45677654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=3.7e-28  Score=172.30  Aligned_cols=139  Identities=22%  Similarity=0.269  Sum_probs=103.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC----------CCccCCCCCCCeeeecCCCchhHHHHHHHHhh-------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH----------GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~----------~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-------------   59 (152)
                      +++++..++.++.|++.||+|||+.          +++||||||+||+++.+   +.++++|||...             
T Consensus       116 ~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~---~~~kL~DFg~a~~~~~~~~~~~~~~  192 (322)
T 3soc_A          116 NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN---LTACIADFGLALKFEAGKSAGDTHG  192 (322)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT---CCEEECCCTTCEEECTTSCCCCCTT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC---CeEEEccCCcccccccccCcccccc
Confidence            4588999999999999999999999          99999999999999877   567788887331             


Q ss_pred             --------------c-----CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC----------CChHHHHHHHHhcCCC
Q 039869           60 --------------G-----LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL----------ASRDDLLELIAFSSEV  110 (152)
Q Consensus        60 --------------~-----~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~  110 (152)
                                    +     ..++.++||||+||++|++++|+.||.+......          ................
T Consensus       193 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (322)
T 3soc_A          193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR  272 (322)
T ss_dssp             CCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCC
T ss_pred             CccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCC
Confidence                          0     1123457999999999999999988766433211          1223333334333333


Q ss_pred             CCCCCC-----CChhHHHHHHHhhccccCCCcCHHHHhc
Q 039869          111 PEFPSN-----ISEDGRDFLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       111 ~~~~~~-----~~~~~~~ll~~~l~~~p~~R~~~~~~l~  144 (152)
                      +..+..     .+.++.+++.+||..||++||++.++++
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            333332     2345899999999999999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=9.7e-28  Score=170.50  Aligned_cols=139  Identities=19%  Similarity=0.295  Sum_probs=102.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC--------CCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH--------GLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~--------~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------------   59 (152)
                      .++++..++.++.|++.||+|||++        |++||||||+||+++.+   +.++++|||...               
T Consensus       129 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~  205 (337)
T 3mdy_A          129 TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVKFISDTNEVDIPPNT  205 (337)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT---SCEEECCCTTCEECC---------CCS
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC---CCEEEEeCCCceeeccccccccCCCCC
Confidence            4688999999999999999999998        99999999999999877   566777776321               


Q ss_pred             --cC------------CCCc------chhHHHHHHHHHHHHhc----------CcccCCccCCCCCChHHHHHHHHhcCC
Q 039869           60 --GL------------LLIY------HVDTWALGRVFVEMMTA----------EISAWGSFGRGLASRDDLLELIAFSSE  109 (152)
Q Consensus        60 --~~------------~~~~------~~DvwslG~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (152)
                        |.            ....      ++||||+||++|++++|          ..|+.... ..................
T Consensus       206 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~  284 (337)
T 3mdy_A          206 RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV-PSDPSYEDMREIVCIKKL  284 (337)
T ss_dssp             SCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS-CSSCCHHHHHHHHTTSCC
T ss_pred             CccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc-CCCCchhhhHHHHhhhcc
Confidence              11            1122      38999999999999999          43333222 112233344444444444


Q ss_pred             CCCCCC-----CCChhHHHHHHHhhccccCCCcCHHHHhcC
Q 039869          110 VPEFPS-----NISEDGRDFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       110 ~~~~~~-----~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      .+..+.     .++.++.+++.+||..||++||++.+++++
T Consensus       285 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          285 RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            444443     455678999999999999999999998754

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.95  E-value=2e-28  Score=172.96  Aligned_cols=136  Identities=21%  Similarity=0.187  Sum_probs=100.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.|++.||+|||++|++||||||+||+++.+   +.++++||+..                       
T Consensus       128 ~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  204 (317)
T 2buj_A          128 GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDE---GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR  204 (317)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---SCEEECCCSSCEESCEEEESHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC---CCEEEEecCcchhccccccccccccccccccccc
Confidence            4678999999999999999999999999999999999999876   34455555410                       


Q ss_pred             -----------hcC---CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHH
Q 039869           59 -----------HGL---LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        59 -----------~~~---~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (152)
                                 .+.   .++.++|+||||+++|++++|..||.....    .......... .....+.+..++.++.++
T Consensus       205 gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~l~~l  279 (317)
T 2buj_A          205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ----KGDSVALAVQ-NQLSIPQSPRHSSALWQL  279 (317)
T ss_dssp             SCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH----TTSCHHHHHH-CC--CCCCTTSCHHHHHH
T ss_pred             CCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc----ccchhhHHhh-ccCCCCccccCCHHHHHH
Confidence                       011   135689999999999999999977644221    1111112222 122233456789999999


Q ss_pred             HHHhhccccCCCcCHHHHhcC
Q 039869          125 LSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~h  145 (152)
                      +.+||..||++||++.+++++
T Consensus       280 i~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          280 LNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhhcChhhCCCHHHHHHH
Confidence            999999999999999998753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=1.2e-27  Score=169.34  Aligned_cols=138  Identities=20%  Similarity=0.311  Sum_probs=105.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++.+++.++.|++.||++||++|++|+||||+||+++.+   +.++++|||...                       
T Consensus       129 ~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~a  205 (318)
T 3lxp_A          129 HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA  205 (318)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCC---CCEEECCccccccccccccccccccCCCCCceeeC
Confidence            458899999999999999999999999999999999999877   566777776321                       


Q ss_pred             -----cCCCCcchhHHHHHHHHHHHHhcCcccCCccCC-----CCCC----hHHHHHHHHhcCCCCCCCCCCChhHHHHH
Q 039869           60 -----GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGR-----GLAS----RDDLLELIAFSSEVPEFPSNISEDGRDFL  125 (152)
Q Consensus        60 -----~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  125 (152)
                           +..++.++|+||+|+++|++++|..|+......     ....    ...+.... ........+..++.++.+++
T Consensus       206 PE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li  284 (318)
T 3lxp_A          206 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL-ERGERLPRPDKCPAEVYHLM  284 (318)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCCCCCCTTCCHHHHHHH
T ss_pred             hHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH-hcccCCCCCccccHHHHHHH
Confidence                 222356789999999999999999776543210     0000    11122222 23344566788999999999


Q ss_pred             HHhhccccCCCcCHHHHhc
Q 039869          126 SKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       126 ~~~l~~~p~~R~~~~~~l~  144 (152)
                      .+||..||++||++.++++
T Consensus       285 ~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          285 KNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCCcccCcCHHHHHH
Confidence            9999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.8e-27  Score=166.89  Aligned_cols=132  Identities=19%  Similarity=0.162  Sum_probs=100.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.++.|++.||+|||++|++|+||||+||+++.+   +.++++||+.                         
T Consensus       129 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  205 (309)
T 2h34_A          129 GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSAD---DFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPE  205 (309)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECSCCC----------------CCGGGCCGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCC---CCEEEecCccCccccccccccccccCCCcCccCHH
Confidence            468999999999999999999999999999999999999877   4455555541                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCC-CCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSE-VPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||||+++|++++|..||.+.      ........+..... ....+..++.++.+++.+||..||++
T Consensus       206 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  279 (309)
T 2h34_A          206 RFSESHATYRADIYALTCVLYECLTGSPPYQGD------QLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPED  279 (309)
T ss_dssp             GTCC----CCCHHHHHHHHHHHHHHSSCSSCSC------HHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGG
T ss_pred             HHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc------hHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHH
Confidence             11233467899999999999999999777554      33333333332222 12345678999999999999999999


Q ss_pred             Cc-CHHHHh
Q 039869          136 RW-TAKHVL  143 (152)
Q Consensus       136 R~-~~~~~l  143 (152)
                      || ++++++
T Consensus       280 Rp~s~~~l~  288 (309)
T 2h34_A          280 RYVTCGDLS  288 (309)
T ss_dssp             SCSSHHHHH
T ss_pred             HHHhHHHHH
Confidence            99 788765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=9.8e-28  Score=166.78  Aligned_cols=130  Identities=19%  Similarity=0.226  Sum_probs=104.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      .++++..++.++.|++.||.|||++|++|+||||+||+++.+   +.++++||+.                        .
T Consensus       117 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  193 (284)
T 2a19_B          117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT---KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQI  193 (284)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC---CCEEECcchhheeccccccccccCCcccccChhhh
Confidence            468999999999999999999999999999999999999877   5667777762                        2


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++|+||+|+++|++++|..|+...        .........    ...+..++.++.+++.+||..||++||+
T Consensus       194 ~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps  261 (284)
T 2a19_B          194 SSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTDLRD----GIISDIFDKKEKTLLQKLLSKKPEDRPN  261 (284)
T ss_dssp             HCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHHHHT----TCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHHhhc----ccccccCCHHHHHHHHHHccCChhhCcC
Confidence            2334577899999999999999998665432        122222221    2245678899999999999999999999


Q ss_pred             HHHHhcCCC
Q 039869          139 AKHVLAHPF  147 (152)
Q Consensus       139 ~~~~l~h~~  147 (152)
                      +.+++++.+
T Consensus       262 ~~e~l~~l~  270 (284)
T 2a19_B          262 TSEILRTLT  270 (284)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998754

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.94  E-value=1.2e-28  Score=188.11  Aligned_cols=148  Identities=20%  Similarity=0.193  Sum_probs=104.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++..++.++.|++.||+|||+.|++||||||+||+++.++....++++|||..                        
T Consensus       116 ~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l  195 (676)
T 3qa8_A          116 CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL  195 (676)
T ss_dssp             TCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHh
Confidence            36899999999999999999999999999999999999997755555778888722                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC---CChHHHHHHH----------HhcC---CCCCCCCCCChhHH
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL---ASRDDLLELI----------AFSS---EVPEFPSNISEDGR  122 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~  122 (152)
                      .+..++.++|+||+|+++|++++|..||.+......   ..........          ....   ........+++.+.
T Consensus       196 ~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~  275 (676)
T 3qa8_A          196 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLE  275 (676)
T ss_dssp             CCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHH
T ss_pred             ccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHH
Confidence            123346789999999999999999978765310000   0000000000          0000   01112334677899


Q ss_pred             HHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          123 DFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       123 ~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      +++..||..||++||++.++++||||++
T Consensus       276 dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          276 RWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            9999999999999999999999999863

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.94  E-value=3.5e-27  Score=167.40  Aligned_cols=138  Identities=16%  Similarity=0.254  Sum_probs=103.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.|++.||++||++|++|+||||+||+++.+   +.++++||+..                        
T Consensus       140 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  216 (326)
T 2w1i_A          140 ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE---NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA  216 (326)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCC---CcEEEecCcchhhccccccccccccCCCCceeEEC
Confidence            458999999999999999999999999999999999999877   56677777622                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccC-------CCCCChH---HHHHHHHhcCCCCCCCCCCChhHHHH
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFG-------RGLASRD---DLLELIAFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (152)
                          .+..++.++|+||||+++|++++|..|+.....       .......   .+...+. .....+.+..++.++.++
T Consensus       217 PE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l  295 (326)
T 2w1i_A          217 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMI  295 (326)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHH
T ss_pred             chhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh-cCCCCCCCCcccHHHHHH
Confidence                112235679999999999999999866543210       0000011   1122222 223345677899999999


Q ss_pred             HHHhhccccCCCcCHHHHhc
Q 039869          125 LSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~l~  144 (152)
                      +.+||..||++||++.++++
T Consensus       296 i~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          296 MTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.94  E-value=7.2e-27  Score=179.25  Aligned_cols=132  Identities=18%  Similarity=0.211  Sum_probs=106.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++..+..++.|++.||.|||++|++||||||+||+++.+   +.++++|||.                         
T Consensus       486 ~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~---~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE  562 (656)
T 2j0j_A          486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE  562 (656)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECCCCCCCSCCC----------CCGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCC---CCEEEEecCCCeecCCCcceeccCCCCCcceeCHH
Confidence            358899999999999999999999999999999999999877   5566777662                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++|+||+|+++|++++ |..||.+.      ...+....+.... .+..+..++..+.+++.+||..||++
T Consensus       563 ~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~------~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~  635 (656)
T 2j0j_A          563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV------KNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSR  635 (656)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhH
Confidence             122335678999999999999997 77666554      4555555554433 34567889999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       636 RPs~~el~~  644 (656)
T 2j0j_A          636 RPRFTELKA  644 (656)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=6.5e-28  Score=170.94  Aligned_cols=140  Identities=17%  Similarity=0.095  Sum_probs=99.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC---CCccCCCCCCCeeeecCCCchhHHHHHHHHh---------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSH---GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR---------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~---~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~---------------------   58 (152)
                      .++++..++.++.|++.||+|||+.   |++||||||+||+++.+   ..++++|||..                     
T Consensus       126 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~  202 (326)
T 3uim_A          126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI  202 (326)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT---CCEEECCCSSCEECCSSSSCEECCCCSCGGGC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC---CCEEeccCccccccCcccccccccccCCcCcc
Confidence            4589999999999999999999999   99999999999999877   56677777632                     


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCC--hHHHHHHHHhcC---------CCCCCCCCCChhHH
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS--RDDLLELIAFSS---------EVPEFPSNISEDGR  122 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~  122 (152)
                           .+..++.++|+||+|+++|++++|..||..........  ............         .....+...+..+.
T Consensus       203 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  282 (326)
T 3uim_A          203 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLI  282 (326)
T ss_dssp             CHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHH
T ss_pred             CHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHH
Confidence                 12234678999999999999999997774221110001  111111110000         01112223346789


Q ss_pred             HHHHHhhccccCCCcCHHHHhcC
Q 039869          123 DFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       123 ~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      +++..||..||++||++.++++|
T Consensus       283 ~li~~cl~~dP~~Rps~~ell~~  305 (326)
T 3uim_A          283 QVALLCTQSSPMERPKMSEVVRM  305 (326)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHhCcCCccCCCHHHHHHH
Confidence            99999999999999999999865

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=6.3e-27  Score=164.56  Aligned_cols=137  Identities=21%  Similarity=0.190  Sum_probs=101.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh-----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH-----------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~-----------------------   59 (152)
                      .++++..++.++.|++.||.|||+.|++|+||||+||+++.+   +.++++||+...                       
T Consensus       128 ~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP  204 (307)
T 2nru_A          128 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP  204 (307)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC---CcEEEeecccccccccccccccccccCCCcCcCCh
Confidence            468999999999999999999999999999999999999877   566777776321                       


Q ss_pred             ---cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc---------CCCCCCCCCCChhHHHHHHH
Q 039869           60 ---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS---------SEVPEFPSNISEDGRDFLSK  127 (152)
Q Consensus        60 ---~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ll~~  127 (152)
                         ...++.++|+||||+++|++++|..|+.......  ....+.......         ......+...+..+.+++.+
T Consensus       205 E~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  282 (307)
T 2nru_A          205 EALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQ  282 (307)
T ss_dssp             HHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS--BTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHH
T ss_pred             HHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchH--HHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHH
Confidence               0113668999999999999999997776543221  111222221111         11122334456778999999


Q ss_pred             hhccccCCCcCHHHHhc
Q 039869          128 CFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       128 ~l~~~p~~R~~~~~~l~  144 (152)
                      ||..+|++||++.++++
T Consensus       283 cl~~~p~~Rps~~~l~~  299 (307)
T 2nru_A          283 CLHEKKNKRPDIKKVQQ  299 (307)
T ss_dssp             HTCSSTTTSCCHHHHHH
T ss_pred             HcCCCcccCcCHHHHHH
Confidence            99999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.93  E-value=5.9e-27  Score=166.83  Aligned_cols=139  Identities=17%  Similarity=0.248  Sum_probs=102.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHH--------hCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIH--------SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh--------~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------------   59 (152)
                      .++++.+++.++.|++.||+|||        +.+++||||||+||+++.+   +.++++||+...               
T Consensus       134 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~  210 (342)
T 1b6c_B          134 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNH  210 (342)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT---SCEEECCCTTCEEEETTTTEEEECCCS
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC---CCEEEEECCCceecccccccccccccc
Confidence            45889999999999999999999        8999999999999999877   567777777320               


Q ss_pred             --cC------------------CCCcchhHHHHHHHHHHHHhc----------CcccCCccCCCCCChHHHHHHHHhcCC
Q 039869           60 --GL------------------LLIYHVDTWALGRVFVEMMTA----------EISAWGSFGRGLASRDDLLELIAFSSE  109 (152)
Q Consensus        60 --~~------------------~~~~~~DvwslG~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (152)
                        +.                  .++.++||||||+++|++++|          ..||..... .......+...+.....
T Consensus       211 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~  289 (342)
T 1b6c_B          211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP-SDPSVEEMRKVVCEQKL  289 (342)
T ss_dssp             CCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC-SSCCHHHHHHHHTTSCC
T ss_pred             CCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc-CcccHHHHHHHHHHHHh
Confidence              00                  011479999999999999999          445544321 11233444444444444


Q ss_pred             CCCCCC-----CCChhHHHHHHHhhccccCCCcCHHHHhcC
Q 039869          110 VPEFPS-----NISEDGRDFLSKCFIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       110 ~~~~~~-----~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h  145 (152)
                      .+..+.     ..+..+.+++.+||..||++||++.+++++
T Consensus       290 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            444443     234578899999999999999999998754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.93  E-value=2.2e-27  Score=166.02  Aligned_cols=131  Identities=8%  Similarity=-0.038  Sum_probs=96.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHhcCc
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEI   84 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~~~~~~   84 (152)
                      ....++..++.|++.||+|||++|++||||||+||+++.+   +.++++.++.  ...++.++|+|||||++|++++|+.
T Consensus       126 ~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~---g~~kl~~~~~--~~~~~~~~Di~slG~il~elltg~~  200 (286)
T 3uqc_A          126 PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSID---GDVVLAYPAT--MPDANPQDDIRGIGASLYALLVNRW  200 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETT---SCEEECSCCC--CTTCCHHHHHHHHHHHHHHHHHSEE
T ss_pred             CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCC---CCEEEEeccc--cCCCCchhHHHHHHHHHHHHHHCCC
Confidence            3566789999999999999999999999999999999987   4444443322  2356889999999999999999998


Q ss_pred             ccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhc
Q 039869           85 SAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~  144 (152)
                      ||.+........  ...... .....  ...+..++.++.+++.+||..||++| ++.++++
T Consensus       201 Pf~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          201 PLPEAGVRSGLA--PAERDT-AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             CSCCCSBCCCSE--ECCBCT-TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             CCCcCCcchhhH--HHHHHh-ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence            887654321100  000000 00000  12335689999999999999999999 9998874

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.8e-26  Score=167.78  Aligned_cols=139  Identities=19%  Similarity=0.300  Sum_probs=99.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecC-CCchhHHHHHHHHhhc----------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-KDAHEAEISAFLQRHG----------------------   60 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~-~~~~~~~l~~~~~~~~----------------------   60 (152)
                      .+++..++.++.|++.||+|||++|++||||||+||++..+ .....++++|||....                      
T Consensus       108 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  187 (396)
T 4eut_A          108 GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY  187 (396)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHh
Confidence            38999999999999999999999999999999999998211 1125678888873211                      


Q ss_pred             ----------CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC-------------------
Q 039869           61 ----------LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP-------------------  111 (152)
Q Consensus        61 ----------~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  111 (152)
                                ..++.++|+||+||++|++++|+.||......  ....+....+..+....                   
T Consensus       188 ~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  265 (396)
T 4eut_A          188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP--RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDM  265 (396)
T ss_dssp             HHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT--TTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSC
T ss_pred             hccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc--cchHHHHHHHhcCCCcccchhheeccCCCcccCccC
Confidence                      12345789999999999999999777643221  12233333333222111                   


Q ss_pred             ----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhc
Q 039869          112 ----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       112 ----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~  144 (152)
                          .++..++..+.+++.+||..||++||++.++++
T Consensus       266 ~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          266 PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence                111234556889999999999999999999863

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.93  E-value=2.5e-26  Score=165.34  Aligned_cols=128  Identities=13%  Similarity=0.092  Sum_probs=95.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeec--------CCCchhHHHHHHHHh---------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA--------GKDAHEAEISAFLQR---------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~--------~~~~~~~~l~~~~~~---------------   58 (152)
                      ++.+++.+++.++.||+.||+|||++||+||||||+||+++.        ......++++|||..               
T Consensus       166 ~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  245 (365)
T 3e7e_A          166 EKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK  245 (365)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCS
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeee
Confidence            456999999999999999999999999999999999999987        111267788888733               


Q ss_pred             ------------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHH
Q 039869           59 ------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLS  126 (152)
Q Consensus        59 ------------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  126 (152)
                                  .+..++.++|||||||++|+|++|+.||.......    .        ...........++...+++.
T Consensus       246 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~--------~~~~~~~~~~~~~~~~~~~~  313 (365)
T 3e7e_A          246 CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----C--------KPEGLFRRLPHLDMWNEFFH  313 (365)
T ss_dssp             SCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----E--------EECSCCTTCSSHHHHHHHHH
T ss_pred             cCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----e--------eechhccccCcHHHHHHHHH
Confidence                        23335788999999999999999998876543200    0        00000111234667889999


Q ss_pred             HhhccccCCCcCHHH
Q 039869          127 KCFIRVHQLRWTAKH  141 (152)
Q Consensus       127 ~~l~~~p~~R~~~~~  141 (152)
                      .||+.+|.+|++..+
T Consensus       314 ~~l~~~p~~r~~~~~  328 (365)
T 3e7e_A          314 VMLNIPDCHHLPSLD  328 (365)
T ss_dssp             HHHCCCCTTCCCCHH
T ss_pred             HHcCCCCCCcchHHH
Confidence            999999999965433

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.90  E-value=5.4e-25  Score=156.74  Aligned_cols=136  Identities=14%  Similarity=0.026  Sum_probs=98.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCeeeecCCC-----------------chhHHHHHHHHh------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLLVAGKD-----------------AHEAEISAFLQR------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh-~~~i~h~dlk~~Nil~~~~~~-----------------~~~~~l~~~~~~------   58 (152)
                      +.+++.+++.++.||+.||+||| ++||+||||||+|||++.++.                 ...++++|||..      
T Consensus       156 ~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~  235 (336)
T 2vuw_A          156 KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG  235 (336)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC
Confidence            56899999999999999999999 999999999999999987631                 127889999832      


Q ss_pred             --------------hcCCCCcchhHHHHHHH-HHHHHhcCcccCCccCCCCCChHHHHHHHHhc-CCCC----CCCCCCC
Q 039869           59 --------------HGLLLIYHVDTWALGRV-FVEMMTAEISAWGSFGRGLASRDDLLELIAFS-SEVP----EFPSNIS  118 (152)
Q Consensus        59 --------------~~~~~~~~~DvwslG~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~  118 (152)
                                    .+.. +.++||||+++. .+++++|..|+....     ............ ....    ..+..++
T Consensus       236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s  309 (336)
T 2vuw_A          236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-----WLHYLTDKMLKQMTFKTKCNTPAMKQIK  309 (336)
T ss_dssp             EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-----HHHHHHHHHHHTCCCSSCCCSHHHHHHH
T ss_pred             cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh-----hhhHHHHhhhhhhccCcccchhhhhhcC
Confidence                          1222 678999998777 677777875553310     001122222111 1111    1123477


Q ss_pred             hhHHHHHHHhhccccCCCcCHHHHh-cCCCCC
Q 039869          119 EDGRDFLSKCFIRVHQLRWTAKHVL-AHPFPS  149 (152)
Q Consensus       119 ~~~~~ll~~~l~~~p~~R~~~~~~l-~h~~~~  149 (152)
                      +++.+||.+||..|     |+.+++ +||||+
T Consensus       310 ~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          310 RKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             HHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            88999999999976     999999 999996

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.9e-24  Score=166.50  Aligned_cols=128  Identities=20%  Similarity=0.256  Sum_probs=97.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------cC-----------C
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------GL-----------L   62 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------~~-----------~   62 (152)
                      +++++.+++.++.||+.||.|||++||+||||||+||+++.+    .++++|||...         |+           .
T Consensus       177 ~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~----~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~  252 (681)
T 2pzi_A          177 QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE----QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTG  252 (681)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS----CEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC----cEEEEecccchhcccCCccCCCccccCHHHHcCC
Confidence            368999999999999999999999999999999999999864    56788887321         11           1


Q ss_pred             CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHHH
Q 039869           63 LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHV  142 (152)
Q Consensus        63 ~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~  142 (152)
                      .+.++|||||||++|++++|..|+.+........              .......++.+.++|.+||..||++||+..+.
T Consensus       253 ~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~  318 (681)
T 2pzi_A          253 PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE--------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEE  318 (681)
T ss_dssp             SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT--------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred             CCCceehhhhHHHHHHHHhCCCCCcccccccccc--------------cccccccCHHHHHHHhhhccCChhhCCCHHHH
Confidence            2568999999999999999986665443211100              00001245788999999999999999988877


Q ss_pred             hcCCCC
Q 039869          143 LAHPFP  148 (152)
Q Consensus       143 l~h~~~  148 (152)
                      +.|+|+
T Consensus       319 l~~~l~  324 (681)
T 2pzi_A          319 MSAQLT  324 (681)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.64  E-value=6.9e-17  Score=122.31  Aligned_cols=77  Identities=14%  Similarity=0.112  Sum_probs=59.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCC---CCcchhHHHHHHHHHH
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL---LIYHVDTWALGRVFVE   78 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~---~~~~~DvwslG~~l~~   78 (152)
                      ++++++.   .|+.||+.||+|+|++||+||||||+|||++.+   +.+|++|||......   ....+++++.+++..|
T Consensus       336 ~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~d---g~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE  409 (569)
T 4azs_A          336 GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDAR---QHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNE  409 (569)
T ss_dssp             TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTT---SCEEECCCTTEESCC---CCSHHHHHHHHHHHHH
T ss_pred             CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCC---CCEEEeecccCeeCCCCCccccCceechhhccHH
Confidence            4567664   478999999999999999999999999999887   678999999654222   2345678888888888


Q ss_pred             HHhcCc
Q 039869           79 MMTAEI   84 (152)
Q Consensus        79 ~~~~~~   84 (152)
                      ++.|+.
T Consensus       410 ~l~g~~  415 (569)
T 4azs_A          410 LFAENK  415 (569)
T ss_dssp             HC----
T ss_pred             HhCCCC
Confidence            887763

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.09  E-value=2.2e-11  Score=84.80  Aligned_cols=53  Identities=21%  Similarity=0.156  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCC
Q 039869            8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLI   64 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~   64 (152)
                      ..+..++.|++.||.+||++|++||||||+||+++ +   +.++++|||........
T Consensus       193 ~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~---~~vkl~DFG~a~~~~~~  245 (282)
T 1zar_A          193 ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-E---EGIWIIDFPQSVEVGEE  245 (282)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-T---TEEEECCCTTCEETTST
T ss_pred             hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-C---CcEEEEECCCCeECCCC
Confidence            44668999999999999999999999999999999 6   67889999976654433

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.05  E-value=2.1e-11  Score=91.96  Aligned_cols=44  Identities=16%  Similarity=0.144  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869           10 IGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus        10 ~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      +..++.|++.||+|||++||+||||||+||+++.     .++++|||..
T Consensus       433 ~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-----~~kL~DFGla  476 (540)
T 3en9_A          433 NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-----DLYIIDFGLG  476 (540)
T ss_dssp             CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----SEEECCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----eEEEEECccC
Confidence            4589999999999999999999999999999975     5677777743

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.96  E-value=6.9e-11  Score=81.20  Aligned_cols=50  Identities=18%  Similarity=0.272  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHHHHH-hCCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcC
Q 039869            7 EHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGL   61 (152)
Q Consensus         7 ~~~~~~i~~qi~~~l~~lh-~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~   61 (152)
                      +..+..++.|++.+|.+|| ++|++||||||+|||++.     .++++|||.....
T Consensus       169 ~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~-----~~~liDFG~a~~~  219 (258)
T 1zth_A          169 ELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID-----KVYFIDMGQAVTL  219 (258)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS-----SEEECCCTTCEET
T ss_pred             hHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC-----cEEEEECcccccC
Confidence            3467899999999999999 999999999999999975     5678888865443

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.63  E-value=2.3e-08  Score=72.39  Aligned_cols=38  Identities=24%  Similarity=0.344  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC
Q 039869            8 HEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK   45 (152)
Q Consensus         8 ~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~   45 (152)
                      ..+..++.|++.+|.+||++|+|||||||.|||++.++
T Consensus       205 ~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          205 PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            45678899999999999999999999999999998664

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.82  E-value=0.0001  Score=49.16  Aligned_cols=105  Identities=7%  Similarity=-0.086  Sum_probs=63.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHH-HH--HHHHhhc-----CCCCcchhHHHH
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAE-IS--AFLQRHG-----LLLIYHVDTWAL   72 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~-l~--~~~~~~~-----~~~~~~~Dvwsl   72 (152)
                      +.||+++++|.++.|.+.+|.-+-. +.-..+=+.|..+++...|.+.-.. ..  .-..+..     ...+.+.-||||
T Consensus        43 ~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~~~~~te~~~IysL  122 (229)
T 2yle_A           43 NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLGYSQCMETEVIESL  122 (229)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC------------CCSSSSSCHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccccccccccCCCChhhccccchHHHHHHHH
Confidence            5789999999999999999876622 1111223345677776553222110 00  0011111     122567789999


Q ss_pred             HHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           73 GRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        73 G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                      |+++|.-+--..                         .+..+..+++.+.+||..|...
T Consensus       123 G~tLY~ALDygL-------------------------~e~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A          123 GIIIYKALDYGL-------------------------KENEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             HHHHHHHHTTTC-------------------------CTTEEECCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHhhcCC-------------------------CcccchhhCHHHHHHHHHHHhc
Confidence            999998886542                         2234456888888888888755

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.19  E-value=0.00016  Score=50.39  Aligned_cols=20  Identities=5%  Similarity=0.169  Sum_probs=16.7

Q ss_pred             hhHHHHHHHHHHHHhcCccc
Q 039869           67 VDTWALGRVFVEMMTAEISA   86 (152)
Q Consensus        67 ~DvwslG~~l~~~~~~~~~~   86 (152)
                      .+.|+++.++|.+.+|..++
T Consensus       268 ~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          268 EKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHH
Confidence            58899999999999988544

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.02  E-value=0.0002  Score=51.02  Aligned_cols=51  Identities=16%  Similarity=0.229  Sum_probs=40.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHh----------------------------------------------------------
Q 039869            5 LPEHEIGRYTKDILRGLDHIHS----------------------------------------------------------   26 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~----------------------------------------------------------   26 (152)
                      ++..+...++.+++..|+.||.                                                          
T Consensus       136 l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  215 (359)
T 3dxp_A          136 MSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADL  215 (359)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCC
Confidence            5678888999999999999997                                                          


Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      ..++|+|+++.||+++.++. ..+.+.||+
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~-~v~~viDwe  244 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEP-RVLAVLDWE  244 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSS-CEEEECCCT
T ss_pred             ceEEeCCCCCCcEEEeCCCC-cEEEEECcc
Confidence            35899999999999986532 234566665

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.01  E-value=7.9e-05  Score=50.70  Aligned_cols=28  Identities=14%  Similarity=0.187  Sum_probs=21.0

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      ..++|+|++|.||+++.+   +.+.+.||+.
T Consensus       183 ~~l~HgDl~~~Nil~~~~---~~~~lIDwe~  210 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDG---KVSGFIDLGR  210 (263)
T ss_dssp             EEEECSSCCTTSEEEETT---EEEEECCCTT
T ss_pred             ceEECCCCCcCcEEEECC---cEEEEEEchh
Confidence            348999999999999765   4445667653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.92  E-value=0.00015  Score=49.02  Aligned_cols=26  Identities=15%  Similarity=0.087  Sum_probs=20.9

Q ss_pred             CccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           29 LVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        29 i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      ++|+|++|.||+++.+   +.+.+.||+.
T Consensus       186 l~HgDl~~~Nil~~~~---~~~~liD~~~  211 (264)
T 1nd4_A          186 VTHGDACLPNIMVENG---RFSGFIDCGR  211 (264)
T ss_dssp             EECSSCCGGGEEEETT---EEEEECCCTT
T ss_pred             EECCCCCCCcEEEECC---cEEEEEcchh
Confidence            8999999999999765   4455777764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=94.49  E-value=0.015  Score=40.65  Aligned_cols=29  Identities=24%  Similarity=0.167  Sum_probs=22.1

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      ..++|+|+++.||+++.+   +.+.+.||+..
T Consensus       222 ~~l~HgD~~~~Nil~~~~---~~~~lIDfe~a  250 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGEN---EQIWVIDLDTV  250 (346)
T ss_dssp             CCEECSSCSTTSEEECGG---GCEEECCCTTC
T ss_pred             CceecCCCCcccEEEeCC---CcEEEEehhhc
Confidence            579999999999999755   44566666633

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=92.75  E-value=0.041  Score=38.27  Aligned_cols=29  Identities=24%  Similarity=0.236  Sum_probs=19.6

Q ss_pred             CCccCCCCCCCeeeecCCC-chhHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAGKD-AHEAEISAFL   56 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~-~~~~~l~~~~   56 (152)
                      .++|+|+++.|++++.+.. .+.+.+.||+
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~  220 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFG  220 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCT
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehh
Confidence            5699999999999986211 1333456665

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=92.01  E-value=0.061  Score=39.11  Aligned_cols=28  Identities=11%  Similarity=0.289  Sum_probs=21.4

Q ss_pred             HhCCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           25 HSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        25 h~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      +...++|||+++.||+++.+   + +.+.||+
T Consensus       230 ~~~~liHGDl~~~Nil~~~~---~-~~lID~e  257 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQD---S-TQVIDPE  257 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSS---C-EEECCCT
T ss_pred             CCCeEEecCCCCCcEEEeCC---C-CEEEeCc
Confidence            45689999999999999765   2 4555554

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=87.27  E-value=0.053  Score=36.66  Aligned_cols=26  Identities=19%  Similarity=0.110  Sum_probs=19.8

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      .++|+|+++.|++++.+   +.+-+.|++
T Consensus       194 ~l~HGDl~~~Nil~~~~---~~~~viDwe  219 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEG---KLIGCIDVG  219 (272)
T ss_dssp             EEECSCCCTTSEEEETT---EEEEECCCT
T ss_pred             EEEcCCCCCCeEEEECC---eEEEEEECc
Confidence            37999999999999866   444456655

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=84.83  E-value=0.11  Score=36.64  Aligned_cols=29  Identities=14%  Similarity=0.032  Sum_probs=21.6

Q ss_pred             hCCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869           26 SHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus        26 ~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      ...++|+|+++.||+++.+   +.+.+.||+.
T Consensus       221 ~~~l~HgDl~~~Nil~~~~---~~~~vIDwe~  249 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDF---QPVAVLDWEM  249 (357)
T ss_dssp             CCEEECSSCSGGGEEEETT---EEEEECCGGG
T ss_pred             CceEEeCCCCCCeEEEeCC---cEEEEEcccc
Confidence            3578999999999999843   4445666653

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=84.46  E-value=0.058  Score=37.51  Aligned_cols=27  Identities=22%  Similarity=0.514  Sum_probs=20.3

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      .+++|+|+++.||+++.+   +.+.+.||+
T Consensus       187 ~~liHgDl~~~Nil~~~~---~~~~lIDf~  213 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGD---ELSGLIDFY  213 (322)
T ss_dssp             EEEECSCCCGGGEEEETT---EEEEECCCT
T ss_pred             cccCCCCCCccCEEEeCC---ceEEEecch
Confidence            378999999999999865   333456654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=80.89  E-value=1.3  Score=30.71  Aligned_cols=25  Identities=16%  Similarity=0.035  Sum_probs=18.6

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      ..++|+|+++.||+++ +    .+.+.||+
T Consensus       195 ~~l~HgD~~~~Nil~~-~----~~~lIDfe  219 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D----GPMFVDLD  219 (328)
T ss_dssp             CEECCSSCSGGGEEES-S----SEEECCCT
T ss_pred             eeeeeCCCCcccEeEc-C----CCEEEECC
Confidence            4689999999999997 3    34455554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-19
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-19
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-18
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-17
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-16
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-15
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-14
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-14
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-14
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-14
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-13
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-12
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-12
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-12
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-12
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-12
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-12
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-11
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	6e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-08

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (201), Expect = 5e-20
 Identities = 42/176 (23%), Positives = 62/176 (35%), Gaps = 32/176 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
           + L E +I    K  L  L+++H + ++H D++  N L                      
Sbjct: 105 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 164

Query: 42  -----VAGKDAHEA-EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
                  G     A E+            Y  D W+LG   +EM   E          L 
Sbjct: 165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE-----PPHHELN 219

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD 151
               LL++          PS  S + +DFL KC  +    RWT   +L HPF +VD
Sbjct: 220 PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 1e-19
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 28/165 (16%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHG 60
               E     Y  ++   L + HS  ++H DI+ +N LL +  +   A+   S       
Sbjct: 101 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 160

Query: 61  LLLI------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
              +                    VD W+LG +  E +  +     +      +  +  +
Sbjct: 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN------TYQETYK 214

Query: 103 LIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            I  S     FP  ++E  RD +S+        R   + VL HP+
Sbjct: 215 RI--SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 257

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 80.1 bits (197), Expect = 3e-19
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 31/170 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH----EAEISAFLQR 58
             + E E   Y + + +GL H+H +  VH D++ +N +    +       +  ++A L  
Sbjct: 119 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 178

Query: 59  HGLLLIYH-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
              + +                      D W++G +   +++      G       + D+
Sbjct: 179 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE------NDDE 232

Query: 100 LLELIAFS--SEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            L  +     +      S ISEDG+DF+ K  +     R T    L HP+
Sbjct: 233 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 282

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 79.3 bits (195), Expect = 7e-19
 Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 31/170 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH----EAEISAFLQR 58
             + E E+  Y +    GL H+H H +VH DI+ +N +    K +     +  ++  L  
Sbjct: 122 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181

Query: 59  HGLLLIY-------------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
             ++ +                    + D WA+G +   +++      G          +
Sbjct: 182 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLE 235

Query: 100 LLELIAFS--SEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            L+ +         +  S++S + +DF+     +  + R T    L HP+
Sbjct: 236 TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 285

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 75.9 bits (186), Expect = 5e-18
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 35/174 (20%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
             L E E  +  + +L  +  +H   +VH D++ +N LL                     
Sbjct: 105 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 164

Query: 42  ----VAGKDAHEAEISAFLQRHGLLLIYH--VDTWALGRVFVEMMTAEISAWGSFGRGLA 95
               V G  ++ A        +     Y   VD W+ G +   ++      W        
Sbjct: 165 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR------ 218

Query: 96  SRDDLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +  +L +I   +     P   + S+  +D +S+  +   Q R+TA+  LAHPF
Sbjct: 219 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 272

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 6e-18
 Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 31/172 (18%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAH----EAEISAFL 56
           SA  L E EI  Y   +   L  +HSH + H DI+ +N +    + +     E   +  L
Sbjct: 95  SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154

Query: 57  QRHGLLLIYH-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           +      +                      D W+LG +   +++              + 
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE------TN 208

Query: 98  DDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             ++E I  +      E    IS +  DF+ +  ++  + R TA   L HP+
Sbjct: 209 QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.2 bits (187), Expect = 6e-18
 Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 29/167 (17%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
           K L E EI   T   L+GL ++HSH ++H D++  N LL                     
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169

Query: 42  -VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
              G     A         G      VD W+LG   +E+   +   +        +    
Sbjct: 170 SFVGTPYWMAPEVILAMDEGQYD-GKVDVWSLGITCIELAERKPPLFNM------NAMSA 222

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           L  IA +        + SE  R+F+  C  ++ Q R T++ +L H F
Sbjct: 223 LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 1e-17
 Identities = 30/170 (17%), Positives = 49/170 (28%), Gaps = 30/170 (17%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK-----DAHEAEISAFLQ 57
            G+PE +  R+   ++ G+ ++H  G+ H DI+ +N LL         D   A +  +  
Sbjct: 98  IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157

Query: 58  RHGLLLIYH--------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
           R  LL                        VD W+ G V   M+  E+             
Sbjct: 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS-----DS 212

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                              I       L K  +     R T   +    +
Sbjct: 213 CQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 262

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (183), Expect = 2e-17
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 29/168 (17%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHG 60
             + E +I    ++ L+ L+ +HS+ ++H DI+ DN LL         +    A +    
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170

Query: 61  LLLIYHV--------------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
                 V                    D W+LG + +EM+  E            +    
Sbjct: 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRA 224

Query: 101 LELIAFSSEVP-EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           L LIA +     + P  +S   RDFL++C     + R +AK +L H F
Sbjct: 225 LYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 2e-17
 Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 24/169 (14%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
           +   E E     K I   + ++HS  + H D++ +N L  + +     +++ F       
Sbjct: 106 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165

Query: 58  RHGLLLIYH-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
            H  L                        D W+LG +   ++      + + G  ++   
Sbjct: 166 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 225

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                +          S +SE+ +  +          R T    + HP+
Sbjct: 226 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 274

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 1e-16
 Identities = 45/185 (24%), Positives = 70/185 (37%), Gaps = 40/185 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL 62
            G+P   I      +LRGLD +HSH +VH D++  N L+ +      A+          +
Sbjct: 111 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 170

Query: 63  LIYH---------------------VDTWALGRVFVEMMTAE---------------ISA 86
            +                       VD W++G +F EM   +               +  
Sbjct: 171 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 230

Query: 87  WGSFGRGLASRDDLLELIAFSSE----VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHV 142
            G  G     RD  L   AF S+    + +F ++I E G+D L KC       R +A   
Sbjct: 231 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

Query: 143 LAHPF 147
           L+HP+
Sbjct: 291 LSHPY 295

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.6 bits (167), Expect = 5e-15
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 31/168 (18%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLLL 63
            E ++  Y  +I+ GL+H+H+  +V+ D++  N LL        ++  ++    +     
Sbjct: 105 SEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 164

Query: 64  IYH-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI 104
                                  D ++LG +  +++               ++D      
Sbjct: 165 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH-----KTKDKHEIDR 219

Query: 105 AFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT-----AKHVLAHPF 147
              +   E P + S + R  L     R    R       A+ V   PF
Sbjct: 220 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 267

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 7e-15
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 38/175 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAE 51
               E     YT +I+  L+++H  G++H D++ +N LL              K      
Sbjct: 103 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162

Query: 52  ISAFLQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
             A          Y               D WALG +  +++               +  
Sbjct: 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG------NEY 216

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK------HVLAHPF 147
            + + I       +FP       RD + K  +     R   +       + AHPF
Sbjct: 217 LIFQKII--KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 269

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 7e-15
 Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 36/167 (21%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK------DAHEAEI---- 52
             L E     +   +L  + H H+ G++H DI+ +N L+   +      D     +    
Sbjct: 105 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164

Query: 53  ------------SAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
                            R+          W+LG +  +M+          G      D+ 
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC---------GDIPFEHDE- 214

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
                       F   +S + +  +  C       R T + +  HP+
Sbjct: 215 ----EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 257

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 9e-15
 Identities = 18/165 (10%), Positives = 53/165 (32%), Gaps = 29/165 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
           L   ++  +   + +G++ +     VH D+   N L+  GK     +  ++  +      
Sbjct: 161 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 220

Query: 63  LIYH----------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
           ++                         D W+ G +  E+ +  ++ +          D  
Sbjct: 221 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI-----PVDAN 275

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
              +  +    + P   +E+    +  C+    + R +  ++ + 
Sbjct: 276 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (163), Expect = 1e-14
 Identities = 26/172 (15%), Positives = 52/172 (30%), Gaps = 34/172 (19%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIH-----SHGLVHCDIQGDNTLLVA---------GKDAH 48
           + L E  + R    +   L   H      H ++H D++  N  L           G    
Sbjct: 104 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163

Query: 49  EAEISAFLQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGSFGRGLA 95
               ++F +       Y               D W+LG +  E+                
Sbjct: 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF------ 217

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
           S+ +L   I    +    P   S++  + +++        R + + +L +P 
Sbjct: 218 SQKELAGKIR-EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 2e-14
 Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 39/174 (22%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------------- 41
           S           Y  +I+ GL  +HS G+V+ D++ DN LL                   
Sbjct: 96  SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 155

Query: 42  -------VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL 94
                    G   + A      Q++     + VD W+ G +  EM+  +    G      
Sbjct: 156 GDAKTNTFCGTPDYIAPEILLGQKYN----HSVDWWSFGVLLYEMLIGQSPFHGQ----- 206

Query: 95  ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH-VLAHPF 147
              ++L   I    + P +P  + ++ +D L K F+R  + R   +  +  HP 
Sbjct: 207 -DEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 257

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.8 bits (162), Expect = 2e-14
 Identities = 31/169 (18%), Positives = 51/169 (30%), Gaps = 32/169 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL 62
               E     Y   I+   +++HS  L++ D++ +N L+         +     +  G  
Sbjct: 136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195

Query: 63  LIYH-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
                                  VD WALG +  EM       +            + E 
Sbjct: 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD------QPIQIYEK 249

Query: 104 IAFSSEVPEFPSNISEDGRDFLSKCFI-----RVHQLRWTAKHVLAHPF 147
           I   S    FPS+ S D +D L          R   L+     +  H +
Sbjct: 250 I--VSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.6 bits (162), Expect = 2e-14
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAF-----LQ 57
               E +  R    +L  + ++H  G+VH D++ +N L  +  +  +  IS F       
Sbjct: 102 GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED 161

Query: 58  RHGLLLIYH-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
              +L                       VD W++G +   ++      +        +  
Sbjct: 162 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE------NDA 215

Query: 99  DLLELIAFSSEVPEFP--SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            L E I  +    + P   +IS+  +DF+     +  + R+T +  L HP+
Sbjct: 216 KLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 266

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 2e-14
 Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 25/162 (15%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQ 57
             L    + +++ D+   ++++  +  VH D+   N L+         D    + ++  Q
Sbjct: 98  SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 157

Query: 58  RHGLLLIYH--------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL 103
             G L +                 D W+ G +  E+ +     +G          D++  
Sbjct: 158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS-----FGRVPYPRIPLKDVVPR 212

Query: 104 IAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
           +       + P        + +  C+     +R +   +   
Sbjct: 213 VE-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 5e-14
 Identities = 35/171 (20%), Positives = 57/171 (33%), Gaps = 35/171 (20%)

Query: 4   GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA--HEAEISAFLQRHGL 61
              E     Y  +I+  L+++HS  +V+ DI+ +N +L         +  +       G 
Sbjct: 101 VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160

Query: 62  LLIYHV--------------------DTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
            +                        D W LG V  EMM   +  +          + L 
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLF 214

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFI-----RVHQLRWTAKHVLAHPF 147
           ELI    E   FP  +S + +  L+         R+      AK V+ H F
Sbjct: 215 ELI--LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 5e-14
 Identities = 26/166 (15%), Positives = 57/166 (34%), Gaps = 27/166 (16%)

Query: 1   SAKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA---------- 50
           +A  L   ++  +  D+ RG+D++     +H D+   N L+     A  A          
Sbjct: 120 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 179

Query: 51  -----------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
                         A    +  +   + D W+ G +  E+++   + +        +  +
Sbjct: 180 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAE 234

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
           L E +       E P N  ++  D + +C+      R +   +L  
Sbjct: 235 LYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 6e-14
 Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 39/173 (22%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVAGKDAHEAEISAFLQRHG 60
           K +    +  + + IL+GL  +H+    ++H D++ DN  +         +I       G
Sbjct: 107 KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDL----G 160

Query: 61  LLLIYH--------------------------VDTWALGRVFVEMMTAEISAWGSFGRGL 94
           L  +                            VD +A G   +EM T+E           
Sbjct: 161 LATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQ---- 216

Query: 95  ASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +   +   +    +   F      + ++ +  C  +    R++ K +L H F
Sbjct: 217 -NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 268

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 1e-13
 Identities = 35/202 (17%), Positives = 68/202 (33%), Gaps = 57/202 (28%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRH 59
             +PE  +G+ +  +++GL ++   H ++H D++  N L+ +  +    +  +S  L   
Sbjct: 99  GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158

Query: 60  ------------------GLLLIYHVDTWALGRVFVEMMT-------------------- 81
                             G       D W++G   VEM                      
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ 218

Query: 82  ----------------AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFL 125
                             +S++G   R   +  +LL+ I             S + +DF+
Sbjct: 219 VEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 278

Query: 126 SKCFIRVHQLRWTAKHVLAHPF 147
           +KC I+    R   K ++ H F
Sbjct: 279 NKCLIKNPAERADLKQLMVHAF 300

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 2e-13
 Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 33/172 (19%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-GKDAHEAEISAFL----- 56
           + L E E   + K IL G+ ++HS  + H D++ +N +L+         +I  F      
Sbjct: 108 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167

Query: 57  -------------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                                +   L    D W++G +   +++      G       ++
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD------TK 221

Query: 98  DDLLELIAFS--SEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            + L  ++        E+ SN S   +DF+ +  ++  + R T +  L HP+
Sbjct: 222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.8 bits (152), Expect = 4e-13
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 32/166 (19%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIY 65
           P      Y  ++   L+++HS  +++ D++ +N LL         +         +    
Sbjct: 102 PNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 161

Query: 66  H-------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF 106
                               +D W+ G +  EM+      + S      +     E I  
Sbjct: 162 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS------NTMKTYEKIL- 214

Query: 107 SSEVPEFPSNISEDGRDFLSKCFI-----RVHQLRWTAKHVLAHPF 147
            +    FP   +ED +D LS+        R+  L+   + V  HP+
Sbjct: 215 -NAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 259

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 5e-13
 Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 30/165 (18%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----------VAGKDAHEAEIS 53
           L   ++      + RG++++ S   +H D+   N L+              +D H  +  
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191

Query: 54  AFLQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
                  L + +               D W+ G +  E+ T   S +          ++L
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PVEEL 246

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
            +L+       + PSN + +    +  C+  V   R T K ++  
Sbjct: 247 FKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 7e-13
 Identities = 32/175 (18%), Positives = 60/175 (34%), Gaps = 38/175 (21%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
             EHE+  Y  +I+  L+H+H  G+++ DI+ +N LL +       +  +S         
Sbjct: 126 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 185

Query: 63  LIYH-----------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
             Y                        VD W+LG +  E++T                 +
Sbjct: 186 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD------GEKN 239

Query: 100 LLELIAFS--SEVPEFPSNISEDGRDFLSKCFIRVHQLRW-----TAKHVLAHPF 147
               I+       P +P  +S   +D + +  ++  + R       A  +  H F
Sbjct: 240 SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 294

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 9e-13
 Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 29/163 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEA-------------- 50
           L   ++  ++  + +G+  + S   +H D+   N LL  G+                   
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 51  ----------EISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
                     +  A       +  +  D W+ G    E+ +      GS        D  
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-----LGSSPYPGMPVDSK 256

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
              +         P +   +  D +  C+      R T K ++
Sbjct: 257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 1e-12
 Identities = 36/195 (18%), Positives = 53/195 (27%), Gaps = 56/195 (28%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQ------------------GDNTLLVAG 44
           + LP   +  Y   + R L +IHS G+ H DI+                  G    LV G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176

Query: 45  KDAHEAEISAFLQRHGLLLIYH-----VDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           +       S + +   L+         +D W+ G V  E++  +    G       S  D
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------SGVD 230

Query: 100 LLELIAFSSEVP---------------------------EFPSNISEDGRDFLSKCFIRV 132
            L  I      P                            F      +     S+     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290

Query: 133 HQLRWTAKHVLAHPF 147
              R T     AH F
Sbjct: 291 PTARLTPLEACAHSF 305

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 2e-12
 Identities = 36/188 (19%), Positives = 65/188 (34%), Gaps = 43/188 (22%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------V 42
           + L E  I      +L+GL +IH+ G++H D++  N  +                    +
Sbjct: 116 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 175

Query: 43  AGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAE---------------ISAW 87
            G        +  +  + +     VD W++G +  EM+T +               +   
Sbjct: 176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT 235

Query: 88  GSFGRGLASRDDLLELIAFSSEVPEFP--------SNISEDGRDFLSKCFIRVHQLRWTA 139
           G+       R    E   +   +PE          +N S    + L K  +   + R TA
Sbjct: 236 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA 295

Query: 140 KHVLAHPF 147
              LAHP+
Sbjct: 296 GEALAHPY 303

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-12
 Identities = 25/166 (15%), Positives = 46/166 (27%), Gaps = 29/166 (17%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHG 60
             L    +  Y   +   L ++ S   VH DI   N L+ +       +  +S +++   
Sbjct: 103 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162

Query: 61  LL---------------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
                                       D W  G    E++       G         +D
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-----HGVKPFQGVKNND 217

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
           ++  I  + E    P N        ++KC+      R     + A 
Sbjct: 218 VIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (146), Expect = 3e-12
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 43/188 (22%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI---------- 52
           + L +  +      ILRGL +IHS  ++H D++  N  +    +    +           
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175

Query: 53  ----------SAFLQRHGLLLIYHVDTWALGRVFVEMMTAE---------------ISAW 87
                     +  +  + +     VD W++G +  E++T                 +   
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235

Query: 88  GSFGRGLASRDDLLELIAFSSEVPEFPS--------NISEDGRDFLSKCFIRVHQLRWTA 139
           G+ G  L  +        +   + + P           +    D L K  +     R TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295

Query: 140 KHVLAHPF 147
              LAH +
Sbjct: 296 AQALAHAY 303

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.2 bits (145), Expect = 3e-12
 Identities = 19/165 (11%), Positives = 52/165 (31%), Gaps = 30/165 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAE 51
             L   E     + +  G+ ++     VH D+   N L+              ++ + A+
Sbjct: 135 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 194

Query: 52  ISAFLQRHGLLLIYH-------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
                    + + +               D WA G V  E+ +  +  +        + +
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-----AHE 249

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
           +++  +     +   P N   +  + +  C+ ++   R +   + 
Sbjct: 250 EVIYYVR-DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIH 293

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 3e-12
 Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 30/166 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAE 51
                  + RY   +  G+ ++ S   +H D+   N LL              +   + +
Sbjct: 106 GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165

Query: 52  ISAFLQRHGLLLIYH--------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
               +Q H  +                   DTW  G    EM T     W        + 
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-----NG 220

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
             +L  I    E    P +  +D  + + +C+    + R T   + 
Sbjct: 221 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 4e-12
 Identities = 25/176 (14%), Positives = 51/176 (28%), Gaps = 34/176 (19%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHG 60
           + +P   +      +  G+ ++     VH D+   N LLV    A  ++  +S  L    
Sbjct: 104 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 163

Query: 61  LLLIYH-----------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                                         D W+ G    E ++     +          
Sbjct: 164 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM-----KG 218

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHV---LAHPFPSV 150
            +++  I    +  E P     +    +S C+I   + R     V   +   + S+
Sbjct: 219 PEVMAFIE-QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 5e-12
 Identities = 20/163 (12%), Positives = 52/163 (31%), Gaps = 29/163 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
           L  +++      I  G+  I     +H D++  N L+        A+  ++  ++ +   
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165

Query: 63  LI---------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
                                     D W+ G +  E++T     +        +  +++
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVI 220

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
           + +         P N  E+    +  C+    + R T  ++ +
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 6e-12
 Identities = 36/194 (18%), Positives = 59/194 (30%), Gaps = 49/194 (25%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----KDAHEAEISAFLQ 57
           + L    I  +   ILRGL +IHS  ++H D++  N LL         D   A ++    
Sbjct: 104 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163

Query: 58  RH---------------------GLLLIYHVDTWALGRVFVEMMTAE------------- 83
            H                            +D W++G +  EM++               
Sbjct: 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 223

Query: 84  --ISAWGSFGRGLASRDDLLELIAFSSEVP--------EFPSNISEDGRDFLSKCFIRVH 133
             +   GS  +   +    L+   +   +P            N      D L K      
Sbjct: 224 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNP 283

Query: 134 QLRWTAKHVLAHPF 147
             R   +  LAHP+
Sbjct: 284 HKRIEVEQALAHPY 297

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (142), Expect = 8e-12
 Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 29/168 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQRHGLL 62
               ++    +   +G+D++H+  ++H D++ +N  L         +  ++    R    
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160

Query: 63  LIYH-------------------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
             +                           D +A G V  E+MT ++       R     
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
             ++     S ++ +  SN  +  +  +++C  +    R     +LA 
Sbjct: 221 --MVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 1e-11
 Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 34/176 (19%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAE--ISAFLQR-- 58
           + + +  I      +  G+ ++     VH D+   N LLV    A  ++  +S  L+   
Sbjct: 102 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161

Query: 59  ---------------------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                                +        D W+ G +  E  +     +          
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-----KG 216

Query: 98  DDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHV---LAHPFPSV 150
            ++  ++    E    P+    +  D ++ C+    + R     V   L + +  V
Sbjct: 217 SEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 271

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.4 bits (140), Expect = 1e-11
 Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 44/189 (23%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISA 54
            GL       +   +L G+ + H   ++H D++  N L+    +        A    I  
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154

Query: 55  FLQRHGLLLIYH---------------VDTWALGRVFVEMMTAEISAWGSFGRGLASR-- 97
               H ++ +++               +D W++G +F EM+       G        R  
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214

Query: 98  -----------DDLLELIAFSSEVP--------EFPSNISEDGRDFLSKCFIRVHQLRWT 138
                       ++ EL  +              F   + E G D LSK        R T
Sbjct: 215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274

Query: 139 AKHVLAHPF 147
           AK  L H +
Sbjct: 275 AKQALEHAY 283

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 2e-11
 Identities = 45/189 (23%), Positives = 63/189 (33%), Gaps = 44/189 (23%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----VAGKDAHEAEISAFLQ 57
            G+P   I  Y   +L+GL   HSH ++H D++  N L+     +   D   A       
Sbjct: 97  TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156

Query: 58  RHGLLLIYH------------------VDTWALGRVFVEMMTAEISAWGS---------- 89
           R     +                    VD W+LG +F EM+T      G           
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216

Query: 90  FGRGLASRDDLLELIAFSSEVPEFP-----------SNISEDGRDFLSKCFIRVHQLRWT 138
              G         + +     P FP             + EDGR  LS+        R +
Sbjct: 217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS 276

Query: 139 AKHVLAHPF 147
           AK  LAHPF
Sbjct: 277 AKAALAHPF 285

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.5 bits (138), Expect = 3e-11
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 35/180 (19%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------ 56
           +      +      ++  +++IHS   +H D++ DN L+  GK  +   I  F       
Sbjct: 98  RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157

Query: 57  --------------------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSF 90
                                        G+      D  +LG V +      +   G  
Sbjct: 158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 217

Query: 91  GRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHV---LAHPF 147
                 + + +     S+ +         +   +L+ C       +    ++     + F
Sbjct: 218 AATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 3e-11
 Identities = 34/192 (17%), Positives = 56/192 (29%), Gaps = 51/192 (26%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
             L    I  Y    L+GL+++H H ++H D++ +N LL                     
Sbjct: 95  LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 154

Query: 42  ------VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAE------------ 83
                 V  +     E+    + +G      VD WA+G +  E++               
Sbjct: 155 RAYTHQVVTRWYRAPELLFGARMYG----VGVDMWAVGCILAELLLRVPFLPGDSDLDQL 210

Query: 84  ---ISAWGSFGRGLASRDDLLELIAFSSEVPEFP-----SNISEDGRDFLSKCFIRVHQL 135
                  G+           L         P  P     S   +D  D +   F+     
Sbjct: 211 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA 270

Query: 136 RWTAKHVLAHPF 147
           R TA   L   +
Sbjct: 271 RITATQALKMKY 282

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 4e-11
 Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 30/164 (18%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDA--HEAEISAFLQRHGLLL 63
               +  +   I +G++++    LVH D+   N L+   +     +  ++  L       
Sbjct: 109 GSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168

Query: 64  I----------------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLL 101
                                  +  D W+ G    E+MT     +           ++ 
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-----PASEIS 223

Query: 102 ELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
            ++    E    P   + D    + KC++     R   + ++  
Sbjct: 224 SILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (134), Expect = 1e-10
 Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 45/187 (24%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG--------KDAHEAEISAFLQ 57
               +  +   +L+GL   HS  ++H D++  N L+             A    I     
Sbjct: 99  DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158

Query: 58  RHGLLLIYH---------------VDTWALGRVFVEMMTAE----------------ISA 86
              ++ +++               +D W+ G +F E+  A                    
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218

Query: 87  WGSF------GRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAK 140
            G+                   +   ++ +      ++  GRD L          R +A+
Sbjct: 219 LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAE 278

Query: 141 HVLAHPF 147
             L HP+
Sbjct: 279 EALQHPY 285

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 1e-10
 Identities = 22/165 (13%), Positives = 48/165 (29%), Gaps = 29/165 (17%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA---------GKDAHEAEISAF 55
           L    +  Y+  + +G++ + S   +H D+   N LL           G      +   +
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 190

Query: 56  LQRHGLLLIYH---------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
           +++    L                   D W+ G +  E+ +   S +          D+ 
Sbjct: 191 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV-----KIDEE 245

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
                        P   + +    +  C+      R T   ++ H
Sbjct: 246 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-10
 Identities = 21/165 (12%), Positives = 59/165 (35%), Gaps = 30/165 (18%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAEIS 53
               ++ +   +I  G+ +++++  VH D+   N ++              +D +E +  
Sbjct: 130 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 189

Query: 54  AFLQRHGLLLIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL 100
               +  L + +             + D W+ G V  E+ T     +        S + +
Sbjct: 190 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQV 244

Query: 101 LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
           L  +     + + P N  +   + +  C+    ++R +   +++ 
Sbjct: 245 LRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 29/166 (17%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAE 51
                 ++    KD+   ++++ S   +H D+   N L+              +   + E
Sbjct: 95  HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154

Query: 52  ISAFLQRHGLLLI------------YHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
            ++ +     +                 D WA G +  E+ +     +  F     +  +
Sbjct: 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-----TNSE 209

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
             E IA        P   SE     +  C+      R T K +L++
Sbjct: 210 TAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 2e-10
 Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 31/170 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD--------AHEAEISA 54
           K L   ++      I  G+ ++     VH D++  N L+             A   E + 
Sbjct: 108 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 167

Query: 55  FLQRHGLLLIYH---------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           +  R G                      D W+ G +  E+ T     +           +
Sbjct: 168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-----VNRE 222

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA--HPF 147
           +L+ +         P    E   D + +C+ +  + R T +++ A    +
Sbjct: 223 VLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 6e-10
 Identities = 32/196 (16%), Positives = 53/196 (27%), Gaps = 51/196 (26%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA-----------GKDAHEAE 51
                 EI R  + +L GL +IH + ++H D++  N L+              +    A+
Sbjct: 112 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 171

Query: 52  ISAFLQRHGLLLIYH----------------VDTWALGRVFVEMMTAE------------ 83
            S   +    ++                   +D W  G +  EM T              
Sbjct: 172 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 231

Query: 84  ---ISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNI---------SEDGRDFLSKCFIR 131
                  GS    +    D  EL      V      +              D + K  + 
Sbjct: 232 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 291

Query: 132 VHQLRWTAKHVLAHPF 147
               R  +   L H F
Sbjct: 292 DPAQRIDSDDALNHDF 307

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 6e-10
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 53/198 (26%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVA----------GKDAHEAEI 52
           + L +++I  Y  +IL+ LD+ HS G++H D++  N ++            G        
Sbjct: 124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183

Query: 53  SAFLQRHGLLLIYH-------------VDTWALGRVFVEMMTAE---------------- 83
             +  R                     +D W+LG +   M+  +                
Sbjct: 184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 243

Query: 84  ------ISAWGSFGRGLASRDDLLELIAFSSEVPEFPS--------NISEDGRDFLSKCF 129
                    +    +     D     I        +           +S +  DFL K  
Sbjct: 244 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL 303

Query: 130 IRVHQLRWTAKHVLAHPF 147
              HQ R TA+  + HP+
Sbjct: 304 RYDHQSRLTAREAMEHPY 321

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 53.6 bits (128), Expect = 7e-10
 Identities = 24/172 (13%), Positives = 48/172 (27%), Gaps = 33/172 (19%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------ 56
             +          D  + L+  H +G++H D++  N ++ A       +           
Sbjct: 106 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 165

Query: 57  -------------------QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASR 97
                              Q  G  +    D ++LG V  E++T E    G       S 
Sbjct: 166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD------SP 219

Query: 98  DDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
             +         +P       +S D    + K   +  + R+     +    
Sbjct: 220 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 271

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (128), Expect = 7e-10
 Identities = 20/167 (11%), Positives = 45/167 (26%), Gaps = 33/167 (19%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL---------------VAGKDAHEA 50
              ++    + I  G+ ++     VH D+   N L+                   D  + 
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 185

Query: 51  EISAFLQRHGLL------------LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD 98
             ++ L     +                 D W+ G V  E+M+     +        +  
Sbjct: 186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-----TNQ 240

Query: 99  DLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
           D++  I         P +        +  C+ +    R     ++  
Sbjct: 241 DVINAIE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 3e-09
 Identities = 19/163 (11%), Positives = 48/163 (29%), Gaps = 29/163 (17%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL-----------VAGKDAHEAEISA 54
               +     D+  G+ ++    ++H D+   N L+              +   + + ++
Sbjct: 99  AAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 158

Query: 55  FLQRHGLLLIYH------------VDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLE 102
                  +                 D W+ G +  E+ +      G       S  +++E
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVE 213

Query: 103 LIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
            I+ +      P   S      ++ C+    + R     +L  
Sbjct: 214 DIS-TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.6 bits (123), Expect = 3e-09
 Identities = 21/168 (12%), Positives = 43/168 (25%), Gaps = 37/168 (22%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL--------------------- 41
           + +    +      I   ++++     +H D+   N L+                     
Sbjct: 110 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169

Query: 42  ------VAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLA 95
                         A  S    +         D WA G +  E+ T  +S +        
Sbjct: 170 YTAHAGAKFPIKWTAPESLAYNKFS----IKSDVWAFGVLLWEIATYGMSPYPGI----- 220

Query: 96  SRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVL 143
               + EL+       E P    E   + +  C+      R +   + 
Sbjct: 221 DLSQVYELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 267

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 5e-09
 Identities = 22/169 (13%), Positives = 53/169 (31%), Gaps = 32/169 (18%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAG-----------KDAHEAE 51
                 ++  +   + +G+  + S   VH D+   N +L              +D ++ E
Sbjct: 125 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184

Query: 52  ISAFLQRHGLLLIYH---------------VDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
             +   + G  L                   D W+ G +  E+MT     +        +
Sbjct: 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----N 239

Query: 97  RDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAH 145
             D+   +         P    +   + + KC+    ++R +   +++ 
Sbjct: 240 TFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 2e-08
 Identities = 29/197 (14%), Positives = 55/197 (27%), Gaps = 55/197 (27%)

Query: 6   PEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH------ 59
               +      +L G+ H+HS G++H D++  N ++ +       +              
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 176

Query: 60  ---------------GLLLIYHVDTWALGRVFVEMMTAEISAWG---------------- 88
                          G+    +VD W++G +  EM+  +I   G                
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236

Query: 89  ------------------SFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFI 130
                             +  +        L   +      E     +   RD LSK  +
Sbjct: 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296

Query: 131 RVHQLRWTAKHVLAHPF 147
                R +    L HP+
Sbjct: 297 IDPAKRISVDDALQHPY 313

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (116), Expect = 2e-08
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 66/211 (31%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIH-SHGLVHCDIQGDNTLLVAG---------KDAHEAEI 52
           +G+P   + + +K +L GLD++H   G++H DI+ +N L+            K A     
Sbjct: 120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 179

Query: 53  SAFLQRH----------------GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLAS 96
             + + +                G       D W+   +  E++T +       G     
Sbjct: 180 CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 239

Query: 97  RDDLLELI----------------------------------------AFSSEVPEFPSN 116
            DD +  I                                           +E  +F  +
Sbjct: 240 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 299

Query: 117 ISEDGRDFLSKCFIRVHQLRWTAKHVLAHPF 147
            +++  DFLS       + R  A  ++ HP+
Sbjct: 300 EAKEISDFLSPMLQLDPRKRADAGGLVNHPW 330

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 4e-08
 Identities = 20/165 (12%), Positives = 51/165 (30%), Gaps = 31/165 (18%)

Query: 5   LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLL------------VAGKDAHEAEI 52
               ++    + I  G+ ++ +   VH D+   N L+            ++     + E 
Sbjct: 107 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166

Query: 53  SAFLQRHGLLLIY-------------HVDTWALGRVFVEMMTAEISAWGSFGRGLASRDD 99
           +       + + +               D W+ G V  E+MT     +        S  +
Sbjct: 167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-----SNHE 221

Query: 100 LLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLA 144
           +++ I         P +        + +C+ +    R     +++
Sbjct: 222 VMKAIN-DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 47.9 bits (113), Expect = 7e-08
 Identities = 24/162 (14%), Positives = 49/162 (30%), Gaps = 38/162 (23%)

Query: 3   KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLL 62
           +      +    K +L  +  IH   LV+ DI+ DN L+  G+   +     ++   G++
Sbjct: 96  RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI--GRPNSKNANMIYVVDFGMV 153

Query: 63  LIYH------------------------------------VDTWALGRVFVEMMTAEISA 86
             Y                                      D  ALG VF+  +   +  
Sbjct: 154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 213

Query: 87  WGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKC 128
            G        + + +     S+ + E  +   E+   ++   
Sbjct: 214 QGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYA 255

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.98
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.43
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	90.64
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	85.26
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	84.83
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	84.66
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	83.24

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-39  Score=227.02  Aligned_cols=139  Identities=25%  Similarity=0.350  Sum_probs=116.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++.+++.+++||+.||+|||++||+||||||+|||++.+   +.++++|||.                         
T Consensus       111 ~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~---~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~  187 (293)
T d1yhwa1         111 TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV  187 (293)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCC---CcEeeccchhheeeccccccccccccCCCccChhh
Confidence            568999999999999999999999999999999999999877   5678888872                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHH-HHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDL-LELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ..+..++.++||||+||++|+|++|..||.+.      +.... .............+..+++++.++|.+||..||++|
T Consensus       188 ~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  261 (293)
T d1yhwa1         188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE------NPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR  261 (293)
T ss_dssp             HSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTS
T ss_pred             hcCCCCCchhceehHhHHHHHHhhCCCCCCCC------CHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHC
Confidence            23444578899999999999999999887665      33333 333444444455667899999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      ||+.++++||||+.
T Consensus       262 ~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         262 GSAKELLQHQFLKI  275 (293)
T ss_dssp             CCHHHHTTCGGGGG
T ss_pred             cCHHHHhcCHhhCC
Confidence            99999999999974

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-39  Score=223.38  Aligned_cols=137  Identities=24%  Similarity=0.364  Sum_probs=117.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hhh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QRH   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~~   59 (152)
                      +++++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||                       ...
T Consensus       101 ~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~---~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~  177 (263)
T d2j4za1         101 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE  177 (263)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCC---CCEeecccceeeecCCCcccccCCCCcccCHHHHc
Confidence            578999999999999999999999999999999999999877   566778887                       334


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCH
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTA  139 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  139 (152)
                      +..++.++||||+||++|+|++|+.||.+.      +..+....+...  .+.+|..+++++.+++.+||..||++|||+
T Consensus       178 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~t~  249 (263)
T d2j4za1         178 GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN------TYQETYKRISRV--EFTFPDFVTEGARDLISRLLKHNPSQRPML  249 (263)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHTT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCCchhhhhhHhHHHHHHhcCCCCCCCC------CHHHHHHHHHcC--CCCCCccCCHHHHHHHHHHccCCHhHCcCH
Confidence            555688999999999999999999887654      556666655433  345678899999999999999999999999


Q ss_pred             HHHhcCCCCCC
Q 039869          140 KHVLAHPFPSV  150 (152)
Q Consensus       140 ~~~l~h~~~~~  150 (152)
                      .++++||||+.
T Consensus       250 ~eil~hp~~~~  260 (263)
T d2j4za1         250 REVLEHPWITA  260 (263)
T ss_dssp             HHHHTCHHHHH
T ss_pred             HHHHcCcCcCC
Confidence            99999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-39  Score=223.14  Aligned_cols=142  Identities=20%  Similarity=0.226  Sum_probs=113.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||..                       
T Consensus        97 ~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~---~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~A  173 (271)
T d1nvra_          97 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA  173 (271)
T ss_dssp             TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECEETTEECCBCCCCSCGGGSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCC---CCEEEccchhheeeccCCccccccceeeCcCccC
Confidence            4679999999999999999999999999999999999999877   56788888722                       


Q ss_pred             ----hcCCC-CcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLL-IYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~-~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..+ +.++||||+||++|+|++|+.||....     ..................+..+++++.+++.+||..||
T Consensus       174 PE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  248 (271)
T d1nvra_         174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS-----DSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENP  248 (271)
T ss_dssp             THHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSS-----TTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             HhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCCh
Confidence                22222 457999999999999999997776543     22233333333333333446789999999999999999


Q ss_pred             CCCcCHHHHhcCCCCCCC
Q 039869          134 QLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       134 ~~R~~~~~~l~h~~~~~~  151 (152)
                      ++|||+.++++||||++.
T Consensus       249 ~~R~t~~eil~hpwf~~~  266 (271)
T d1nvra_         249 SARITIPDIKKDRWYNKP  266 (271)
T ss_dssp             TTSCCHHHHTTCTTTTCC
T ss_pred             hHCcCHHHHhcCHhhCcC
Confidence            999999999999999863

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-39  Score=224.48  Aligned_cols=141  Identities=29%  Similarity=0.462  Sum_probs=115.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus       104 ~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~---~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE  180 (288)
T d2jfla1         104 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE  180 (288)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCC---CCEEEEechhhhccCCCcccccccccccccCCHH
Confidence            3579999999999999999999999999999999999999887   45677777611                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC-CCCCCCCCCChhHHHHHHHhhc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS-EVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                             .+..++.++||||+||++|+|++|+.||.+.      +..+....+.... .....+..+++++.+||.+||.
T Consensus       181 ~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~  254 (288)
T d2jfla1         181 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL------NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE  254 (288)
T ss_dssp             HHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS------CGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSC
T ss_pred             HHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC------CHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcc
Confidence                   2333567899999999999999999777665      4444444444333 3344567799999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .||++|||+.++++||||+.+
T Consensus       255 ~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         255 KNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             SSTTTSCCHHHHTTSGGGCCC
T ss_pred             CChhHCcCHHHHhcCcccCCC
Confidence            999999999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.4e-39  Score=224.88  Aligned_cols=140  Identities=27%  Similarity=0.330  Sum_probs=117.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh---------------------h-
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR---------------------H-   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~---------------------~-   59 (152)
                      ++++++.+++.++.||+.||.|||++||+||||||+|||++.+   +.++++|||..                     . 
T Consensus       109 ~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~---~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~  185 (309)
T d1u5ra_         109 KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPANSFVGTPYWMAPEVILA  185 (309)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT---TEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCC---CCEEEeecccccccCCCCccccCccccCHHHHhc
Confidence            4679999999999999999999999999999999999999987   67788888721                     1 


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                        ...++.++||||+||++|+|++|..||.+.      ........+.........+..+++++.+|+.+||..||++||
T Consensus       186 ~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp  259 (309)
T d1u5ra_         186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP  259 (309)
T ss_dssp             TTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS------CHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCcCchhhhhhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCc
Confidence              123577899999999999999999877665      445555555555544445667899999999999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 039869          138 TAKHVLAHPFPSV  150 (152)
Q Consensus       138 ~~~~~l~h~~~~~  150 (152)
                      |+.++++||||+.
T Consensus       260 t~~ell~Hp~~~~  272 (309)
T d1u5ra_         260 TSEVLLKHRFVLR  272 (309)
T ss_dssp             CHHHHTTCHHHHS
T ss_pred             CHHHHHhCHHhcC
Confidence            9999999999965

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.1e-38  Score=220.16  Aligned_cols=144  Identities=21%  Similarity=0.306  Sum_probs=118.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------H
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------Q   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~   57 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+||++......+.++++|||                        .
T Consensus       101 ~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~  180 (307)
T d1a06a_         101 KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV  180 (307)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHH
Confidence            4679999999999999999999999999999999999999653333566777776                        2


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                      ..+..++.++||||+||++|+|++|..||.+.      ....+...+.......  +.+..+++++.+++.+||..||++
T Consensus       181 ~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  254 (307)
T d1a06a_         181 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE------NDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK  254 (307)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGG
T ss_pred             HcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCC------CHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhH
Confidence            23444688999999999999999999887665      5556666655444332  345678999999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      |||+.|+++||||++.
T Consensus       255 R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         255 RFTCEQALQHPWIAGD  270 (307)
T ss_dssp             SCCHHHHHHSTTTTSS
T ss_pred             CcCHHHHhcCHhhCCC
Confidence            9999999999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-38  Score=217.15  Aligned_cols=137  Identities=17%  Similarity=0.231  Sum_probs=111.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC-----CccCCCCCCCeeeecCCCchhHHHHHHHH-------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHG-----LVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~-----i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------   57 (152)
                      ++++++.+++.++.||+.||+|||+.+     |+||||||+||+++.+   +.++++|||.                   
T Consensus       103 ~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~---~~vkl~DFG~a~~~~~~~~~~~~~~gt~~  179 (269)
T d2java1         103 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTSFAKAFVGTPY  179 (269)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTT---SCEEECCHHHHHHC-----------CCCS
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCC---CcEEEeeccceeecccCCCccccCCCCcc
Confidence            467999999999999999999999865     9999999999999987   5677778772                   


Q ss_pred             ------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcc
Q 039869           58 ------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIR  131 (152)
Q Consensus        58 ------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  131 (152)
                            ..+..++.++||||+||++|+|++|+.||.+.      +..++...+.... .+.++..+++++.+++.+||..
T Consensus       180 Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~------~~~~~~~~i~~~~-~~~~~~~~s~~l~~li~~~L~~  252 (269)
T d2java1         180 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF------SQKELAGKIREGK-FRRIPYRYSDELNEIITRMLNL  252 (269)
T ss_dssp             CCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCS
T ss_pred             cCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCC------CHHHHHHHHHcCC-CCCCCcccCHHHHHHHHHHcCC
Confidence                  23344578899999999999999999777654      5566666665443 3456788999999999999999


Q ss_pred             ccCCCcCHHHHhcCCCC
Q 039869          132 VHQLRWTAKHVLAHPFP  148 (152)
Q Consensus       132 ~p~~R~~~~~~l~h~~~  148 (152)
                      ||++|||+.++++|||+
T Consensus       253 dp~~Rps~~ell~hp~i  269 (269)
T d2java1         253 KDYHRPSVEEILENPLI  269 (269)
T ss_dssp             SGGGSCCHHHHHTSTTC
T ss_pred             ChhHCcCHHHHHhCCcC
Confidence            99999999999999996

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=219.47  Aligned_cols=139  Identities=19%  Similarity=0.318  Sum_probs=116.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCCeeeec-CCCchhHHHHHHHHhh--------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHG--LVHCDIQGDNTLLVA-GKDAHEAEISAFLQRH--------------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~--i~h~dlk~~Nil~~~-~~~~~~~~l~~~~~~~--------------------   59 (152)
                      +++++.+++.++.||+.||+|||+++  |+||||||+|||++. +   +.++++|||...                    
T Consensus       107 ~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~---~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE  183 (270)
T d1t4ha_         107 KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---GSVKIGDLGLATLKRASFAKAVIGTPEFMAPE  183 (270)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT---SCEEECCTTGGGGCCTTSBEESCSSCCCCCGG
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCC---CCEEEeecCcceeccCCccCCcccCccccCHH
Confidence            56899999999999999999999998  999999999999963 4   567888888221                    


Q ss_pred             --cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           60 --GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        60 --~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                        ...++.++||||+||++|+|++|+.||.+..     +...+...+.....++..+...++++.+++.+||..||++||
T Consensus       184 ~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~  258 (270)
T d1t4ha_         184 MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY  258 (270)
T ss_dssp             GGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcc-----cHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCc
Confidence              1235788999999999999999997776542     556666666655555556677899999999999999999999


Q ss_pred             CHHHHhcCCCCC
Q 039869          138 TAKHVLAHPFPS  149 (152)
Q Consensus       138 ~~~~~l~h~~~~  149 (152)
                      |+.|+++||||+
T Consensus       259 s~~ell~Hp~fk  270 (270)
T d1t4ha_         259 SIKDLLNHAFFQ  270 (270)
T ss_dssp             CHHHHHTSGGGC
T ss_pred             CHHHHhCCcccC
Confidence            999999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=6.9e-38  Score=223.02  Aligned_cols=142  Identities=23%  Similarity=0.340  Sum_probs=117.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      .+|++.+++.++.||+.||+|||++||+||||||+|||++... .+.++++|||.                        .
T Consensus       122 ~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~-~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~  200 (352)
T d1koba_         122 YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV  200 (352)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT-CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccC-CCeEEEeecccceecCCCCceeeccCcccccCHHHH
Confidence            4699999999999999999999999999999999999997321 15678888872                        2


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCC--CCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEV--PEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++||||+||++|+|++|..||.+.      +.......+......  ...+..+++++.+||.+||..||++|
T Consensus       201 ~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  274 (352)
T d1koba_         201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGE------DDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR  274 (352)
T ss_dssp             TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS------SHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             cCCCCCCccchHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHC
Confidence            3444678899999999999999999888665      555565555544432  33456799999999999999999999


Q ss_pred             cCHHHHhcCCCCCCC
Q 039869          137 WTAKHVLAHPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~h~~~~~~  151 (152)
                      ||+.++++||||++.
T Consensus       275 ~s~~eil~Hp~~~~~  289 (352)
T d1koba_         275 LTVHDALEHPWLKGD  289 (352)
T ss_dssp             CCHHHHHTSTTTSSC
T ss_pred             cCHHHHhcCHhhCCC
Confidence            999999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=8.4e-38  Score=216.21  Aligned_cols=140  Identities=22%  Similarity=0.308  Sum_probs=115.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                        
T Consensus       105 ~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~  181 (277)
T d1phka_         105 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD---MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII  181 (277)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCC---CCeEEccchheeEccCCCceeeeeccCCCCCHHHh
Confidence            578999999999999999999999999999999999999877   66677888721                        


Q ss_pred             ------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhc
Q 039869           59 ------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 ------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~  130 (152)
                            ....++.++|+||+||++|+|++|+.||.+.      +.......+.......  .....+++++.+++.+||.
T Consensus       182 ~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  255 (277)
T d1phka_         182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR------KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV  255 (277)
T ss_dssp             HHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCC
T ss_pred             hccccccCCCCCchheEcccchhhhhhccCCCCCCCC------CHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcc
Confidence                  1122356799999999999999999888765      5555555555444322  2335799999999999999


Q ss_pred             cccCCCcCHHHHhcCCCCCCC
Q 039869          131 RVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       131 ~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .||++||++.++++||||++.
T Consensus       256 ~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         256 VQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             SSGGGSCCHHHHTTSGGGCTT
T ss_pred             CChhHCcCHHHHHcCHHHHHh
Confidence            999999999999999999863

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=219.34  Aligned_cols=138  Identities=26%  Similarity=0.369  Sum_probs=118.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++..++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||.                         
T Consensus       100 ~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~---g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~  176 (337)
T d1o6la_         100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV  176 (337)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGG
T ss_pred             cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCC---CCEEEeecccccccccCCcccccceeCHHHhhhhh
Confidence            578999999999999999999999999999999999999887   6678888872                         


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+||++|+|++|+.||.+.      +...+...+....  +.+|..+++++.+||.+||..||++|+
T Consensus       177 ~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~dli~~~L~~dP~~R~  248 (337)
T d1o6la_         177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ------DHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             GSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             ccCCCCChhhcccchhhHHHHHHHCCCCCCCc------CHHHHHHHHhcCC--CCCCccCCHHHHHHHHhhccCCchhhc
Confidence            23444578999999999999999999888765      5666666665443  467788999999999999999999999


Q ss_pred             C-----HHHHhcCCCCCCC
Q 039869          138 T-----AKHVLAHPFPSVD  151 (152)
Q Consensus       138 ~-----~~~~l~h~~~~~~  151 (152)
                      +     ++++++||||++.
T Consensus       249 ~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         249 GGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TCSTTTHHHHHTSGGGTTC
T ss_pred             ccccccHHHHHcCcccccC
Confidence            4     8999999999863

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-37  Score=217.66  Aligned_cols=141  Identities=30%  Similarity=0.442  Sum_probs=112.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------H
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------Q   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~   57 (152)
                      .+.+++..++.++.|++.||+|||+++|+||||||+|||++..   +.++++||+                        .
T Consensus       110 ~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~---~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~  186 (305)
T d1blxa_         110 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV  186 (305)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCC---CCeeecchhhhhhhcccccCCCcccChhhcCcch
Confidence            4568999999999999999999999999999999999999876   455666665                        3


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc-C------------------------CCCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS-S------------------------EVPE  112 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------------~~~~  112 (152)
                      ..+..++.++||||+||++|||++|+.||.+.      +..+....+... .                        ....
T Consensus       187 ~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
T d1blxa_         187 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS------SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  260 (305)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGG
T ss_pred             hcCCCCChhehhhchHHHHHHHHHCCCCCCCC------CHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhh
Confidence            44556788999999999999999999887665      333333222110 0                        0112


Q ss_pred             CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      .+..+++.+.+||.+||..||++|||+.|+++||||++-
T Consensus       261 ~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         261 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence            345678899999999999999999999999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-37  Score=220.53  Aligned_cols=138  Identities=21%  Similarity=0.253  Sum_probs=118.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH----------------------Hhhc
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL----------------------QRHG   60 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~----------------------~~~~   60 (152)
                      +++++.+++.++.||+.||.|||++||+||||||+|||++.+   +.++|+|||                      ...+
T Consensus       136 ~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~---g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~  212 (350)
T d1rdqe_         136 GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILS  212 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCC---CCEEeeeceeeeecccccccccCccccCCHHHHcC
Confidence            579999999999999999999999999999999999999877   577888887                      2344


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc---
Q 039869           61 LLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW---  137 (152)
Q Consensus        61 ~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~---  137 (152)
                      ..++.++||||+||++|+|++|+.||.+.      +...+...+....  +..|..+++++.++|.+||..||.+|+   
T Consensus       213 ~~~~~~~DiwSlGvilyemltG~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~kR~~~~  284 (350)
T d1rdqe_         213 KGYNKAVDWWALGVLIYEMAAGYPPFFAD------QPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRFGNL  284 (350)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHCC--CCCCTTCCHHHHHHHHHHSCSCTTTCTTSS
T ss_pred             CCCCccccccchhHHHHHHHhCCCCCCCc------CHHHHHHHHhcCC--CCCCccCCHHHHHHHHHHhhhCHHhccccc
Confidence            55678899999999999999999888665      5556666555443  455678999999999999999999995   


Q ss_pred             --CHHHHhcCCCCCCC
Q 039869          138 --TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 --~~~~~l~h~~~~~~  151 (152)
                        ++.++++||||++.
T Consensus       285 r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         285 KNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TTTTHHHHTSGGGTTC
T ss_pred             cccHHHHHcCccccCC
Confidence              89999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-37  Score=216.78  Aligned_cols=138  Identities=22%  Similarity=0.319  Sum_probs=115.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------   56 (152)
                      ++++++.+++.++.|++.||+|||++||+||||||+||+++.+   +.++++|||                         
T Consensus       102 ~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~---~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~A  178 (288)
T d1uu3a_         102 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED---MHIQITDFGTAKVLSPESKQARANSFVGTAQYVS  178 (288)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECC----------CCCCGGGCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCC---ceEEecccccceecccCCcccccccccCCccccC
Confidence            3579999999999999999999999999999999999999877   456667776                         


Q ss_pred             --HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           57 --QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        57 --~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                        ...+..++.++||||+||++|+|++|..||.+.      +...+...+...  ...+|..+++++.+||.+||..||+
T Consensus       179 PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~  250 (288)
T d1uu3a_         179 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG------NEYLIFQKIIKL--EYDFPEKFFPKARDLVEKLLVLDAT  250 (288)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHTT--CCCCCTTCCHHHHHHHHTTSCSSGG
T ss_pred             ceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc------CHHHHHHHHHcC--CCCCCccCCHHHHHHHHHHccCCHh
Confidence              223344577899999999999999999887665      556666665533  3457788999999999999999999


Q ss_pred             CCcCHHH------HhcCCCCCC
Q 039869          135 LRWTAKH------VLAHPFPSV  150 (152)
Q Consensus       135 ~R~~~~~------~l~h~~~~~  150 (152)
                      +|||++|      +++||||++
T Consensus       251 ~R~t~~e~~~~~~i~~Hpff~~  272 (288)
T d1uu3a_         251 KRLGCEEMEGYGPLKAHPFFES  272 (288)
T ss_dssp             GSTTSGGGTCHHHHHTSGGGTT
T ss_pred             HCcCHHHHcCCHHHHcCCccCC
Confidence            9999987      589999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.3e-37  Score=214.95  Aligned_cols=140  Identities=26%  Similarity=0.329  Sum_probs=109.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||.                        
T Consensus        94 ~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE  170 (286)
T d1ob3a_          94 EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE---GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD  170 (286)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECCTTHHHHHCC---------CCCTTCCHH
T ss_pred             cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCC---CCEEecccccceecccCccccceecccchhhhHH
Confidence            5679999999999999999999999999999999999999887   4556666651                        


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCCC-----------------------
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSEV-----------------------  110 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------------------  110 (152)
                        .....++.++|+||+||++|++++|+.||.+.      +..+....+..  +...                       
T Consensus       171 ~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T d1ob3a_         171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV------SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL  244 (286)
T ss_dssp             HHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC
T ss_pred             HHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCC------CHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCc
Confidence              11223478899999999999999999887654      32322222110  0000                       


Q ss_pred             --CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 --PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 --~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        ......+++++.+|+.+||..||++|||+.|+++||||++
T Consensus       245 ~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             chhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence              1123557889999999999999999999999999999985

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.8e-37  Score=220.78  Aligned_cols=141  Identities=21%  Similarity=0.261  Sum_probs=115.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-----------------------h-
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-----------------------R-   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-----------------------~-   58 (152)
                      +++++..++.++.||+.||+|||++|++||||||+|||++..   +.++++|||.                       . 
T Consensus       102 ~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~---g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~  178 (364)
T d1omwa3         102 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ  178 (364)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS---SCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHS
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCC---CcEEEeeeceeeecCCCcccccccccccchhHHhh
Confidence            568899999999999999999999999999999999999877   5678888871                       1 


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      .+..++.++||||+||++|+|++|+.||.+...   .....+...  .....+..+..+++++.++|.+||..||++||+
T Consensus       179 ~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---~~~~~~~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  253 (364)
T d1omwa3         179 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT---KDKHEIDRM--TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLG  253 (364)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS---SCHHHHHHH--SSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             cCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHh--cccCCCCCCCCCCHHHHHHHHHHcccCHHHhCC
Confidence            234467889999999999999999988866432   122222222  233445667889999999999999999999999


Q ss_pred             -----HHHHhcCCCCCCC
Q 039869          139 -----AKHVLAHPFPSVD  151 (152)
Q Consensus       139 -----~~~~l~h~~~~~~  151 (152)
                           ++++++||||++-
T Consensus       254 ~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         254 CLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             TSSSTHHHHHTSGGGTTC
T ss_pred             CcccCHHHHHcCccccCC
Confidence                 7999999999863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=216.65  Aligned_cols=141  Identities=25%  Similarity=0.273  Sum_probs=110.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++.+++.+++||+.||+|||++|++||||||+||+++.+   +.++++|||..                       
T Consensus        94 ~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~---~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE  170 (299)
T d1ua2a_          94 SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN---GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPE  170 (299)
T ss_dssp             CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCC---CccccccCccccccCCCcccccceecChhhccHH
Confidence            4578999999999999999999999999999999999999887   56778888722                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhc--CCC-------------------CC--
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFS--SEV-------------------PE--  112 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~--  112 (152)
                         .+..++.++||||+||++|+|++|..||.+.      ...+....+...  ...                   +.  
T Consensus       171 ~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~------~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (299)
T d1ua2a_         171 LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD------SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIP  244 (299)
T ss_dssp             HHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCC
T ss_pred             HHccCCCCChhhhhhhcchHHHHHHhCcCCCCCC------CHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCC
Confidence               1223467899999999999999999777654      333333222110  000                   00  


Q ss_pred             ---CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          113 ---FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       113 ---~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                         .....++++.+||.+||..||++|||+.|+|+||||++.
T Consensus       245 ~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         245 LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             hHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence               113568899999999999999999999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.5e-37  Score=219.19  Aligned_cols=143  Identities=24%  Similarity=0.403  Sum_probs=117.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++++++.+++.++.||+.||+|||++|++||||||+|||++... .+.++++|||.                        
T Consensus       118 ~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~-~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv  196 (350)
T d1koaa2         118 HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV  196 (350)
T ss_dssp             TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT-SCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCC-CCeEEEeecchheecccccccceecCcccccCHHH
Confidence            35699999999999999999999999999999999999996431 14678888872                        


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                      ..+..++.++||||+||++|+|++|+.||.+.      +..+....+.......  .....+++++.+||.+||..||++
T Consensus       197 ~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  270 (350)
T d1koaa2         197 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE------NDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT  270 (350)
T ss_dssp             HHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGG
T ss_pred             HcCCCCChhHhhhhhhHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence            23444577899999999999999999887665      5566666655444322  233568999999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      |||+.++++||||++.
T Consensus       271 R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         271 RMTIHQALEHPWLTPG  286 (350)
T ss_dssp             SCCHHHHHHSTTTSCT
T ss_pred             CcCHHHHhcCcccCCC
Confidence            9999999999999864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.7e-37  Score=214.60  Aligned_cols=139  Identities=22%  Similarity=0.315  Sum_probs=118.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH----------------------Hhh
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL----------------------QRH   59 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~----------------------~~~   59 (152)
                      ++.+++..++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||                      ...
T Consensus        98 ~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~---g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~  174 (316)
T d1fota_          98 SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN---GHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVS  174 (316)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT---SCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHT
T ss_pred             cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCC---CCEEEecCccceEeccccccccCcccccCHHHHc
Confidence            4568899999999999999999999999999999999999887   567888887                      334


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc--
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW--  137 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~--  137 (152)
                      +..++.++||||+||++|+|++|+.||.+.      +..+....+....  ...|..+++++.+++.+||..||.+|+  
T Consensus       175 ~~~y~~~~DiwSlGvilyemltG~~Pf~~~------~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dp~~R~~~  246 (316)
T d1fota_         175 TKPYNKSIDWWSFGILIYEMLAGYTPFYDS------NTMKTYEKILNAE--LRFPPFFNEDVKDLLSRLITRDLSQRLGN  246 (316)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCTTTCTTS
T ss_pred             CCCCCchhhccccchhHHHHHhCCCCCCCc------CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhhCHHhcccc
Confidence            555688999999999999999999888765      5566666655443  356778999999999999999999996  


Q ss_pred             ---CHHHHhcCCCCCCC
Q 039869          138 ---TAKHVLAHPFPSVD  151 (152)
Q Consensus       138 ---~~~~~l~h~~~~~~  151 (152)
                         +++++++||||++-
T Consensus       247 ~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         247 LQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             STTTTHHHHTSGGGSSC
T ss_pred             chhhHHHHHcCcccccC
Confidence               89999999999863

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=212.23  Aligned_cols=140  Identities=31%  Similarity=0.406  Sum_probs=108.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus        96 ~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~---~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE  172 (298)
T d1gz8a_          96 LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE  172 (298)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeeccc---CcceeccCCcceeccCCcccceeecccceeeehh
Confidence            4579999999999999999999999999999999999999877   56677777722                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-HhcCCC---------------CC-------
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AFSSEV---------------PE-------  112 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------~~-------  112 (152)
                         .....+.++|+||+||++|++++|+.||.+.      +.......+ ......               ..       
T Consensus       173 ~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (298)
T d1gz8a_         173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD------SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ  246 (298)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCC
T ss_pred             hhccccCCCccccccccchhhhHHhhCCCCCCCC------CHHHHHHHHHHhcCCCchhhcccccccccccccccccccc
Confidence               1111357899999999999999999887654      323222221 110000               00       


Q ss_pred             ----CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 ----FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 ----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                          ....+++++.+|+.+||..||++|||+.|+++||||++
T Consensus       247 ~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~  288 (298)
T d1gz8a_         247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD  288 (298)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             chhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhcc
Confidence                01346788999999999999999999999999999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-37  Score=215.80  Aligned_cols=137  Identities=26%  Similarity=0.428  Sum_probs=117.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-------------------------H
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-------------------------Q   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-------------------------~   57 (152)
                      +++++.+++.++.||+.||+|||++|++||||||+|||++.+   +.++++|||                         .
T Consensus        98 ~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~---~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  174 (320)
T d1xjda_          98 HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD---GHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI  174 (320)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCC---CceeccccchhhhcccccccccccCCCCCcCCHHH
Confidence            568999999999999999999999999999999999999877   556677776                         2


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|+||+||++|+|++|+.||.+.      +...+...+...  .+.+|..+++++.+++.+||..||++||
T Consensus       175 ~~~~~~~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~~~i~~~--~~~~p~~~s~~~~dli~~~L~~dP~~R~  246 (320)
T d1xjda_         175 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ------DEEELFHSIRMD--NPFYPRWLEKEAKDLLVKLFVREPEKRL  246 (320)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSB
T ss_pred             HcCCCCCchhhhhhhhHHHHHHHhCCCCCCCC------CHHHHHHHHHcC--CCCCCccCCHHHHHHHHHhcccCCCCCc
Confidence            34445678999999999999999999888765      566666666543  3567788999999999999999999999


Q ss_pred             CHH-HHhcCCCCCC
Q 039869          138 TAK-HVLAHPFPSV  150 (152)
Q Consensus       138 ~~~-~~l~h~~~~~  150 (152)
                      ++. ++++||||++
T Consensus       247 s~~~~l~~hpff~~  260 (320)
T d1xjda_         247 GVRGDIRQHPLFRE  260 (320)
T ss_dssp             TTBSCGGGSGGGTT
T ss_pred             CHHHHHHhCchhcc
Confidence            996 8999999986

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-37  Score=216.32  Aligned_cols=144  Identities=24%  Similarity=0.434  Sum_probs=110.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~   58 (152)
                      +++++..++.++.|++.||.|||+ +||+||||||+|||++.+   +.++++|||                       ..
T Consensus        99 ~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~---~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl  175 (322)
T d1s9ja_          99 GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL  175 (322)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT---CCEEECCCCCCHHHHHHTC---CCSSCCCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCC---CCEEEeeCCCccccCCCccccccCCccccCchHH
Confidence            568999999999999999999997 599999999999999877   567777776                       23


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCC------------------------------------CChHHHHH
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGL------------------------------------ASRDDLLE  102 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~  102 (152)
                      .+..++.++||||+||++|||++|+.||.+......                                    ....+...
T Consensus       176 ~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (322)
T d1s9ja_         176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD  255 (322)
T ss_dssp             HCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHh
Confidence            445578899999999999999999988876432100                                    00001111


Q ss_pred             HHHhcCCCCCCC-CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          103 LIAFSSEVPEFP-SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       103 ~~~~~~~~~~~~-~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ... ....+..+ ..++.++.+|+.+||..||++|||+.|+++||||++
T Consensus       256 ~~~-~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         256 YIV-NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             HHH-TSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             hhh-ccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence            111 11222222 336889999999999999999999999999999974

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=212.07  Aligned_cols=143  Identities=22%  Similarity=0.344  Sum_probs=116.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCC-chhHHHHHHH------------------------H
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKD-AHEAEISAFL------------------------Q   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~-~~~~~l~~~~------------------------~   57 (152)
                      +++++.+++.++.|++.||+|||+++++||||||+||+++.++. ...++++|||                        .
T Consensus       108 ~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~  187 (293)
T d1jksa_         108 ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI  187 (293)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHH
T ss_pred             cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHH
Confidence            57999999999999999999999999999999999999976542 2246778887                        2


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccCC
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                      ..+..++.++||||+||++|+|++|+.||.+.      +..+....+.......  ..+..++.++.+||.+||..||++
T Consensus       188 ~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  261 (293)
T d1jksa_         188 VNYEPLGLEADMWSIGVITYILLSGASPFLGD------TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK  261 (293)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGG
T ss_pred             HcCCCCCCcccchhhhHHHHHHHcCCCCCCCC------CHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhH
Confidence            23444678999999999999999999888765      5555555554443322  234678999999999999999999


Q ss_pred             CcCHHHHhcCCCCCCC
Q 039869          136 RWTAKHVLAHPFPSVD  151 (152)
Q Consensus       136 R~~~~~~l~h~~~~~~  151 (152)
                      |||+.++++||||+..
T Consensus       262 R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         262 RMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             SCCHHHHHHSTTTCC-
T ss_pred             CcCHHHHhcCcccCCC
Confidence            9999999999999863

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-38  Score=224.53  Aligned_cols=146  Identities=16%  Similarity=0.203  Sum_probs=111.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ++|++.+++.++.||+.||+|||++||+||||||+||+++.+...+.++++|||..                        
T Consensus       106 ~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  185 (335)
T d2ozaa1         106 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL  185 (335)
T ss_dssp             CCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHH
Confidence            57999999999999999999999999999999999999987666677899999822                        


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++||||+||++|+|++|+.||.+.....  ....+...+.......  .....+++++.+||.+||..||++|
T Consensus       186 ~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  263 (335)
T d2ozaa1         186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR  263 (335)
T ss_dssp             CGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTS
T ss_pred             cCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH--HHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHC
Confidence            23335678999999999999999998887653211  0111111121111111  1113578999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      |++.+++.||||++
T Consensus       264 ~s~~eil~hp~~~~  277 (335)
T d2ozaa1         264 MTITEFMNHPWIMQ  277 (335)
T ss_dssp             CCHHHHHHSHHHHT
T ss_pred             cCHHHHHcCHHhhC
Confidence            99999999999965

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-37  Score=211.37  Aligned_cols=132  Identities=19%  Similarity=0.292  Sum_probs=108.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------H   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------~   59 (152)
                      +++++.+++.++.||+.||+|||++||+||||||+||+++.+.  +.++++|||..                       .
T Consensus       105 ~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~--~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~  182 (273)
T d1xwsa_         105 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR  182 (273)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT--TEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCC--CeEEECccccceecccccccccccCCCcCCHHHHc
Confidence            5789999999999999999999999999999999999998542  46778888721                       1


Q ss_pred             cCC-CCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcC
Q 039869           60 GLL-LIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWT  138 (152)
Q Consensus        60 ~~~-~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  138 (152)
                      +.. ++.++||||+||++|+|++|+.||.+.        ..+    .  .....++..+++++.+++.+||..||++|||
T Consensus       183 ~~~~~~~~~DiwSlGvilyell~g~~Pf~~~--------~~i----~--~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s  248 (273)
T d1xwsa_         183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEI----I--RGQVFFRQRVSSECQHLIRWCLALRPSDRPT  248 (273)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--------HHH----H--HCCCCCSSCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCcccccccceeeehhHhhCCCCCCCc--------hHH----h--hcccCCCCCCCHHHHHHHHHHccCCHhHCcC
Confidence            222 245689999999999999999777543        111    1  1233466789999999999999999999999


Q ss_pred             HHHHhcCCCCCC
Q 039869          139 AKHVLAHPFPSV  150 (152)
Q Consensus       139 ~~~~l~h~~~~~  150 (152)
                      +.++++||||++
T Consensus       249 ~~eil~hp~~~~  260 (273)
T d1xwsa_         249 FEEIQNHPWMQD  260 (273)
T ss_dssp             HHHHHTSGGGSS
T ss_pred             HHHHhcCHhhCC
Confidence            999999999986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-36  Score=210.06  Aligned_cols=141  Identities=23%  Similarity=0.341  Sum_probs=111.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++..++.+++|++.||+|||++||+||||||+||+++.+   ..++++|||..                       
T Consensus        95 ~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe  171 (292)
T d1unla_          95 NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN---GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD  171 (292)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccC---CceeeeecchhhcccCCCccceeeccccchhhhh
Confidence            4678999999999999999999999999999999999999877   56677888721                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC---------------------------
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS---------------------------  108 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  108 (152)
                         ....++.++||||+||++|+|++|+.||+...     +..+....+....                           
T Consensus       172 ~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (292)
T d1unla_         172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT  246 (292)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTC
T ss_pred             HhccCCCCCchhhccccchHHHHHhhCCCCCCCCC-----CHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccc
Confidence               12224678999999999999999998876543     3333333321110                           


Q ss_pred             CCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          109 EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       109 ~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      ........+++.+.+|+.+||..||++|||++|+|+||||++
T Consensus       247 ~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             hhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence            111233557888999999999999999999999999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-37  Score=215.59  Aligned_cols=141  Identities=23%  Similarity=0.361  Sum_probs=115.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------R   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------~   58 (152)
                      .++++.+++.++.||+.||+|||++||+||||||+||+++.+. ...+++.|||.                        .
T Consensus        97 ~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~-~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~  175 (321)
T d1tkia_          97 FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH  175 (321)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCC-ceEEEEcccchhhccccCCcccccccccccccchhc
Confidence            4699999999999999999999999999999999999997542 23567788872                        2


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCC--CCCCCChhHHHHHHHhhccccCCC
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPE--FPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      .+..++.++||||+||++|+|++|..||.+.      +..++...+.......+  .+..++.++.+|+.+||..||++|
T Consensus       176 ~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T d1tkia_         176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAE------TNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             TTCEECHHHHHHHHHHHHHHHHHSSCTTCCS------SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             cCCCCCchhhcccHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHC
Confidence            3334577899999999999999999887765      55666666654443322  234689999999999999999999


Q ss_pred             cCHHHHhcCCCCCC
Q 039869          137 WTAKHVLAHPFPSV  150 (152)
Q Consensus       137 ~~~~~~l~h~~~~~  150 (152)
                      ||+.++++||||++
T Consensus       250 ~s~~eil~hp~~~~  263 (321)
T d1tkia_         250 MTASEALQHPWLKQ  263 (321)
T ss_dssp             CCHHHHHHSHHHHS
T ss_pred             cCHHHHhcCHhhcc
Confidence            99999999999964

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-36  Score=213.35  Aligned_cols=141  Identities=24%  Similarity=0.300  Sum_probs=109.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +.++++.+++.+++||+.||+|||++||+||||||+|||++.++  ..++++|||.                        
T Consensus       116 ~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~--~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~  193 (350)
T d1q5ka_         116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL  193 (350)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT--CCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC--CceeEecccchhhccCCcccccccccccccChHH
Confidence            45799999999999999999999999999999999999998652  3567888872                        


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-Hh-cC----------------CCC-------
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AF-SS----------------EVP-------  111 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~----------------~~~-------  111 (152)
                       .....++.++||||+||++||+++|..||...      +..+....+ .. +.                ..+       
T Consensus       194 ~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~------~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (350)
T d1q5ka_         194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW  267 (350)
T ss_dssp             HTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCG
T ss_pred             hhcccCCCcceeecccceEEEehhhCCCCCCCC------CHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCch
Confidence             12334578899999999999999999777654      222222111 10 00                000       


Q ss_pred             --CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          112 --EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       112 --~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                        ......++++.+||.+||..||++|||+.|+++||||++
T Consensus       268 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         268 TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             GGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             hhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence              112357889999999999999999999999999999975

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-36  Score=210.50  Aligned_cols=134  Identities=14%  Similarity=0.191  Sum_probs=109.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      .++++.+++.++.||+.||+|||+++|+||||||+||+++.+   +.++++|||..                        
T Consensus       159 ~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aP  235 (325)
T d1rjba_         159 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP  235 (325)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT---TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccC---CeEEEeeccccccccCCCceeeeccccCCCccCCh
Confidence            358999999999999999999999999999999999999988   67888888832                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|||||||++|||++ |..||.+..     ....+ ..+......++.|..+++++.+|+.+||..||+
T Consensus       236 E~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~-----~~~~~-~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~  309 (325)
T d1rjba_         236 ESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP-----VDANF-YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSR  309 (325)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----CSHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC-----HHHHH-HHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence               22334778999999999999998 786665542     22333 333334556677889999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +|||+.++++|
T Consensus       310 ~RPt~~ei~~~  320 (325)
T d1rjba_         310 KRPSFPNLTSF  320 (325)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999865

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-35  Score=207.78  Aligned_cols=141  Identities=23%  Similarity=0.258  Sum_probs=107.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      .+.+++.+++.+++|++.||.|||++||+||||||+||+++.+   +.++++|||..                       
T Consensus       111 ~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y  187 (318)
T d3blha1         111 LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY  187 (318)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCC-----CCCCCSCCSCGGG
T ss_pred             ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCC---CcEEeeecceeeecccccccccccccceecCHHH
Confidence            4568899999999999999999999999999999999999877   45666666511                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHh--cCCCCCCC---------------
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAF--SSEVPEFP---------------  114 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------------  114 (152)
                             ....++.++||||+||++|+|++|+.||.+.      ........+..  +...+...               
T Consensus       188 ~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (318)
T d3blha1         188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN------TEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV  261 (318)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTCCCC-------CC
T ss_pred             hhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCC------CHHHHHHHHHHhcCCCChhhccccchhhhhhhhccc
Confidence                   1224578999999999999999999777654      33333222211  11111100               


Q ss_pred             -------------CCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          115 -------------SNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       115 -------------~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                   ...++++.+||.+||..||++|||+.|+++||||+.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         262 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             SSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             ccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence                         0136678899999999999999999999999999863

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=208.73  Aligned_cols=141  Identities=23%  Similarity=0.351  Sum_probs=112.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +.+++..++.+++||+.||+|+|++|++||||||+||+++.+   +.++++|||..                        
T Consensus       124 ~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~---~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe  200 (322)
T d1vzoa_         124 ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD  200 (322)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---SCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCC---CCEEEeeccchhhhcccccccccccccccccchhH
Confidence            467899999999999999999999999999999999999987   56778888711                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                          ....++.++||||+||++|+|++|+.||.+....  .....+.....  ...+..|..+++++.+++.+||.+||+
T Consensus       201 ~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~--~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~l~~dP~  276 (322)
T d1vzoa_         201 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK--NSQAEISRRIL--KSEPPYPQEMSALAKDLIQRLLMKDPK  276 (322)
T ss_dssp             HHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC--CCHHHHHHHHH--HCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             HhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcc--cCCCCCcccCCHHHHHHHHHHcccCHH
Confidence                1112356899999999999999999888665321  12233333332  234556778999999999999999999


Q ss_pred             CCc-----CHHHHhcCCCCCC
Q 039869          135 LRW-----TAKHVLAHPFPSV  150 (152)
Q Consensus       135 ~R~-----~~~~~l~h~~~~~  150 (152)
                      +||     |++|+++||||++
T Consensus       277 ~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         277 KRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             GSTTSSTTTHHHHHTSGGGTT
T ss_pred             HcCCCCcccHHHHHcCHhhcC
Confidence            999     5899999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-35  Score=209.60  Aligned_cols=139  Identities=27%  Similarity=0.362  Sum_probs=109.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH----------------------h-h
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ----------------------R-H   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~----------------------~-~   59 (152)
                      ++|++..++.+++||+.||+|||++||+||||||+|||++.+   +.++++|||.                      . .
T Consensus       116 ~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~---~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~  192 (346)
T d1cm8a_         116 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED---CELKILDFGLARQADSEMTGYVVTRWYRAPEVILN  192 (346)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHT
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccc---cccccccccceeccCCccccccccccccCHHHHcC
Confidence            579999999999999999999999999999999999999887   5667777761                      1 2


Q ss_pred             cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHH-HHhc------------------------C----CC
Q 039869           60 GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLEL-IAFS------------------------S----EV  110 (152)
Q Consensus        60 ~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------------~----~~  110 (152)
                      ...++.++|+||+||++|+|++|+.||.+.      +....... ....                        .    ..
T Consensus       193 ~~~~~~~~DiwSlGvil~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (346)
T d1cm8a_         193 WMRYTQTVDIWSVGCIMAEMITGKTLFKGS------DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF  266 (346)
T ss_dssp             TTCCCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG
T ss_pred             CCCCCccchhhcchHHHHHHHHCcCCCCCC------ChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccch
Confidence            233578899999999999999999777654      22211111 1100                        0    01


Q ss_pred             CCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          111 PEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       111 ~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                      .......++++.+||.+||..||++|||+.++|+||||++
T Consensus       267 ~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         267 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence            1233567889999999999999999999999999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=209.10  Aligned_cols=140  Identities=26%  Similarity=0.334  Sum_probs=106.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH-----------------------Hh
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL-----------------------QR   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~-----------------------~~   58 (152)
                      .+++++.+++.+++||+.||+|||++||+||||||+||+++.+   +.+++.+|+                       ..
T Consensus       115 ~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~---~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~  191 (348)
T d2gfsa1         115 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEMTGYVATRWYRAPEIML  191 (348)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECCC----CCTGGGSSSCHHHHTSCHHHHT
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccc---ccccccccchhcccCcccccccccccccCchhhc
Confidence            3579999999999999999999999999999999999999877   444555554                       12


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcC------------------------CCCC--
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSS------------------------EVPE--  112 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~--  112 (152)
                      ....++.++|+||+||++|+|++|+.||.+.      +.......+....                        ..+.  
T Consensus       192 ~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (348)
T d2gfsa1         192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT------DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN  265 (348)
T ss_dssp             TCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCC
T ss_pred             CCccCCcccchhhhhHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcc
Confidence            2233478899999999999999999887654      2222222111100                        0000  


Q ss_pred             ---CCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 ---FPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 ---~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                         .....++++.+||.+||..||++|||+.|+|+||||++
T Consensus       266 ~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~  306 (348)
T d2gfsa1         266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  306 (348)
T ss_dssp             HHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             hhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCC
Confidence               12357889999999999999999999999999999985

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-35  Score=205.57  Aligned_cols=135  Identities=16%  Similarity=0.251  Sum_probs=107.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++.+++.++.||+.||+|||+++|+||||||+|||++.+   +.++++|||..                        
T Consensus       129 ~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~AP  205 (299)
T d1ywna1         129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  205 (299)
T ss_dssp             -CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG---GCEEECC------CCSCTTSCCTTSCCCGGGGCCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCC---CcEEEccCcchhhccccccccccCceeeCccccch
Confidence            458899999999999999999999999999999999999877   67888888832                        


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                         .+..++.++||||+||++|||+++..+|+....    ....+...+.. ...+..|..+++++.+++.+||..||++
T Consensus       206 E~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~  280 (299)
T d1ywna1         206 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK----IDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQ  280 (299)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----CSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCC----HHHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHcCCChhH
Confidence               222346789999999999999998655544321    33344444443 3456678889999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      |||+.++++|
T Consensus       281 Rpt~~eil~~  290 (299)
T d1ywna1         281 RPTFSELVEH  290 (299)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-35  Score=209.49  Aligned_cols=140  Identities=25%  Similarity=0.329  Sum_probs=108.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      +++++..++.++.|++.||+|||++||+||||||+|||++.+   +.++++|||.                         
T Consensus       104 ~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~a  180 (345)
T d1pmea_         104 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA  180 (345)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCC---CCEEEcccCceeeccCCCccceeeccccccceech
Confidence            478999999999999999999999999999999999999877   5667777761                         


Q ss_pred             ----hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-Hh-----------------------cCC
Q 039869           58 ----RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-AF-----------------------SSE  109 (152)
Q Consensus        58 ----~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~  109 (152)
                          ..+..++.++|+||+||++|+|++|+.||.+..      ........ ..                       ...
T Consensus       181 PE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (345)
T d1pmea_         181 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH------YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPH  254 (345)
T ss_dssp             GGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCC
T ss_pred             HHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCC------HHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCc
Confidence                122234678999999999999999997775542      11111111 00                       000


Q ss_pred             CC-----CCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          110 VP-----EFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       110 ~~-----~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                      ..     .....++.++.+|+.+||..||++|||+.++|+||||++.
T Consensus       255 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         255 KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             CCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             cCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            00     1224578889999999999999999999999999999853

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-35  Score=202.35  Aligned_cols=136  Identities=18%  Similarity=0.316  Sum_probs=109.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +.++++.++..++.||+.||+|||+++|+||||||+|||++.+   ..++++|||.                        
T Consensus        98 ~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A  174 (276)
T d1uwha_          98 ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA  174 (276)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT---SSEEECCCCCSCC------------CCCCGGGCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCC---CCEEEccccceeeccccCCcccccccccCcccCC
Confidence            3569999999999999999999999999999999999999887   5667777761                        


Q ss_pred             ---hh---cCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC---CCCCCCChhHHHHHHHh
Q 039869           58 ---RH---GLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP---EFPSNISEDGRDFLSKC  128 (152)
Q Consensus        58 ---~~---~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~  128 (152)
                         ..   ...++.++|||||||++||+++|+.||.+..     ....+...+..+...+   ..+..+++++.+++.+|
T Consensus       175 PE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~-----~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~c  249 (276)
T d1uwha_         175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-----NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC  249 (276)
T ss_dssp             HHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHH
T ss_pred             HHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHH
Confidence               11   1224678999999999999999997776542     4445555554444333   35677899999999999


Q ss_pred             hccccCCCcCHHHHhcC
Q 039869          129 FIRVHQLRWTAKHVLAH  145 (152)
Q Consensus       129 l~~~p~~R~~~~~~l~h  145 (152)
                      |..||++|||+.+++++
T Consensus       250 l~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         250 LKKKRDERPLFPQILAS  266 (276)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHH
Confidence            99999999999998864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=204.83  Aligned_cols=140  Identities=16%  Similarity=0.247  Sum_probs=115.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-------------------------   58 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-------------------------   58 (152)
                      ++++.++..++.||+.||+|||+++|+||||||+||+++.+   ..++++|||..                         
T Consensus       105 ~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~  181 (272)
T d1qpca_         105 KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA  181 (272)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecc---cceeeccccceEEccCCccccccccCCcccccChHH
Confidence            58999999999999999999999999999999999999987   67788888722                         


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                       .+..++.++|||||||++||++++..|++...     ...++...+..+ ..+..|..+++++.+++.+||..||++||
T Consensus       182 ~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~-----~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~P~~Rp  255 (272)
T d1qpca_         182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDRP  255 (272)
T ss_dssp             HHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhc-CCCCCcccChHHHHHHHHHHcCCCHhHCc
Confidence             22234678999999999999999766766553     556666666543 44566788999999999999999999999


Q ss_pred             CHHHHhc--CCCCCCCC
Q 039869          138 TAKHVLA--HPFPSVDE  152 (152)
Q Consensus       138 ~~~~~l~--h~~~~~~~  152 (152)
                      |+.++++  ++||...|
T Consensus       256 t~~ei~~~L~~~ftste  272 (272)
T d1qpca_         256 TFDYLRSVLEDFFTATE  272 (272)
T ss_dssp             CHHHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHhhhhhhcCC
Confidence            9999987  77776544

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.3e-34  Score=204.39  Aligned_cols=142  Identities=25%  Similarity=0.349  Sum_probs=108.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ++|++.+++.+++||+.||+|||++||+||||||+|||++.++  ..++++|||..                        
T Consensus       124 ~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~--~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~  201 (328)
T d3bqca1         124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL  201 (328)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--TEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC--CeeeecccccceeccCCCcccccccCccccCcccc
Confidence            5789999999999999999999999999999999999998542  35678888822                        


Q ss_pred             -hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH-------------HhcC----------------
Q 039869           59 -HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI-------------AFSS----------------  108 (152)
Q Consensus        59 -~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~----------------  108 (152)
                       ....++.++|+||+||++|++++|+.||....     +.......+             ....                
T Consensus       202 ~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~-----~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (328)
T d3bqca1         202 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH-----DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSR  276 (328)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS-----SHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCC
T ss_pred             cCCCCCCcccchhhhhhhhHHhccCCCCCCCCc-----hhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccc
Confidence             12234778999999999999999997776543     211111110             0000                


Q ss_pred             ------CCCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          109 ------EVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       109 ------~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                            ........+++++.+||.+||..||++|||++|+|+||||+..
T Consensus       277 ~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         277 KRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  325 (328)
T ss_dssp             CCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred             cchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence                  0011123478889999999999999999999999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-34  Score=200.75  Aligned_cols=134  Identities=16%  Similarity=0.221  Sum_probs=112.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ...+++..++.++.||+.||+|||++||+||||||+|||++.+   +.++++|||.                        
T Consensus       109 ~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~---~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aP  185 (287)
T d1opja_         109 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  185 (287)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCCCTTTCCSSSSEEETTEEECGGGCCH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCC---CcEEEccccceeecCCCCceeeccccccccccCh
Confidence            3568999999999999999999999999999999999999887   6788888872                        


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        ..+..++.++||||+||++||++++..|++...     +...+...+.. ...++.+..+++++.+++.+||..||++
T Consensus       186 E~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~-----~~~~~~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~  259 (287)
T d1opja_         186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSD  259 (287)
T ss_dssp             HHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC-----CHHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc-----hHHHHHHHHhc-CCCCCCCccchHHHHHHHHHHcCCCHhH
Confidence              223335778999999999999999876776553     55555555543 4456778889999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      |||+.++++
T Consensus       260 Rps~~ei~~  268 (287)
T d1opja_         260 RPSFAEIHQ  268 (287)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-35  Score=202.87  Aligned_cols=137  Identities=19%  Similarity=0.283  Sum_probs=111.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++++++.++..++.||+.||+|||+++++||||||+||+++.+   +.++++|||.                        
T Consensus       101 ~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~  177 (277)
T d1xbba_         101 NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWY  177 (277)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCSEEEC----CCCGGGC
T ss_pred             ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccccc---CcccccchhhhhhccccccccccccccCCCceec
Confidence            4679999999999999999999999999999999999999877   5667777762                        


Q ss_pred             ----hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           58 ----RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        58 ----~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                          ..+..++.++|||||||++||+++ |+.||.+.      +..++...+.. ...++.|..+++++.+++.+||..|
T Consensus       178 APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~------~~~~~~~~i~~-~~~~~~p~~~~~~~~~li~~cl~~d  250 (277)
T d1xbba_         178 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM------KGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYD  250 (277)
T ss_dssp             CHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC------CHHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC------CHHHHHHHHHc-CCCCCCCcccCHHHHHHHHHHcCCC
Confidence                222334678999999999999998 77666543      55666666654 3456678899999999999999999


Q ss_pred             cCCCcCHHHH---hcCCCC
Q 039869          133 HQLRWTAKHV---LAHPFP  148 (152)
Q Consensus       133 p~~R~~~~~~---l~h~~~  148 (152)
                      |++||++.++   |+|+|+
T Consensus       251 p~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         251 VENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             TTTSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhCHHh
Confidence            9999999987   456554

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.6e-34  Score=199.34  Aligned_cols=133  Identities=17%  Similarity=0.255  Sum_probs=108.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++.+++.++..++.||+.||+|||+++++||||||+|||++.+   +.++++|||..                       
T Consensus       122 ~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~  198 (299)
T d1jpaa_         122 DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR  198 (299)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECCC-----------------------CGG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCC---CcEEECCcccceEccCCCCcceeeecccccCCcc
Confidence            3568999999999999999999999999999999999999887   56677777621                       


Q ss_pred             -------hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhc
Q 039869           59 -------HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFI  130 (152)
Q Consensus        59 -------~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~  130 (152)
                             .+..++.++|||||||++||+++ |..||.+.      ...++...+..+ ..++.+..+++++.+++.+||.
T Consensus       199 y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~------~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~  271 (299)
T d1jpaa_         199 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM------TNQDVINAIEQD-YRLPPPMDCPSALHQLMLDCWQ  271 (299)
T ss_dssp             GSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTC
T ss_pred             ccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCccchHHHHHHHHHHcC
Confidence                   22334678999999999999998 77666554      556666666543 3455678899999999999999


Q ss_pred             cccCCCcCHHHHhc
Q 039869          131 RVHQLRWTAKHVLA  144 (152)
Q Consensus       131 ~~p~~R~~~~~~l~  144 (152)
                      .||++||++.++++
T Consensus       272 ~~P~~RPs~~ei~~  285 (299)
T d1jpaa_         272 KDRNHRPKFGQIVN  285 (299)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CCHhHCcCHHHHHH
Confidence            99999999988764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-34  Score=198.08  Aligned_cols=140  Identities=16%  Similarity=0.234  Sum_probs=115.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++.+++.++.||+.||+|||+++++||||||+||+++.+   +.++++|||..                        
T Consensus       108 ~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~---~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE  184 (285)
T d1fmka3         108 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE  184 (285)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCCTTC--------------CCGGGSCHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCC---CcEEEcccchhhhccCCCceeeccccccccccChH
Confidence            468999999999999999999999999999999999999877   56777777621                        


Q ss_pred             --hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           59 --HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        59 --~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                        .+..++.++||||+||++||+++|..|++...     ...++...+... ..++.+..+++++.+++.+||..||++|
T Consensus       185 ~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~-----~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~R  258 (285)
T d1fmka3         185 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-----VNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEER  258 (285)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhc-CCCCCCcccCHHHHHHHHHHcccCHhHC
Confidence              22334678999999999999999776776653     556666665543 3455788899999999999999999999


Q ss_pred             cCHHHHhc--CCCCCCC
Q 039869          137 WTAKHVLA--HPFPSVD  151 (152)
Q Consensus       137 ~~~~~~l~--h~~~~~~  151 (152)
                      |++.++++  ++||...
T Consensus       259 ps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         259 PTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             CCHHHHHHHHHTTTSCS
T ss_pred             cCHHHHHHHHhhhhcCC
Confidence            99999887  8888653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-34  Score=196.59  Aligned_cols=134  Identities=19%  Similarity=0.227  Sum_probs=107.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ..++++..++.++.||+.||.|||+++++||||||+||+++.+   ..++++|||..                       
T Consensus       102 ~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~---~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~ap  178 (273)
T d1mp8a_         102 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP  178 (273)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---TEEEECC-------------------CCGGGCCH
T ss_pred             CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCC---CcEEEccchhheeccCCcceeccceecCcccchh
Confidence            4568999999999999999999999999999999999999987   56777777721                       


Q ss_pred             ---hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           59 ---HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        59 ---~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         .+..++.++|||||||++||+++ |..|+.+.      +..++...+..+ ..++.+..+++++.+++.+||..||+
T Consensus       179 E~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~------~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dp~  251 (273)
T d1mp8a_         179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV------KNNDVIGRIENG-ERLPMPPNCPPTLYSLMTKCWAYDPS  251 (273)
T ss_dssp             HHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC------CGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hHhccCCCCCccccccchHHHHHHHhcCCCCCCCC------CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCHh
Confidence               22334678999999999999998 66555443      455555555543 34567889999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +|||+.+++++
T Consensus       252 ~Rps~~ei~~~  262 (273)
T d1mp8a_         252 RRPRFTELKAQ  262 (273)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999998864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-34  Score=197.74  Aligned_cols=137  Identities=19%  Similarity=0.277  Sum_probs=112.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh-----------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR-----------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~-----------------------   58 (152)
                      ++++++.+++.++.||+.||+|||+++++||||||+||+++.+   +.++++|||..                       
T Consensus       103 ~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~  179 (285)
T d1u59a_         103 REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKWY  179 (285)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET---TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccC---CceeeccchhhhcccccccccccccccccCcccc
Confidence            3579999999999999999999999999999999999999887   67788888722                       


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRV  132 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~  132 (152)
                           .+..++.++|||||||++||+++ |..||.+.      ...++...+..+ ..++.|..+++++.+++.+||..+
T Consensus       180 aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~------~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~  252 (285)
T d1u59a_         180 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM------KGPEVMAFIEQG-KRMECPPECPPELYALMSDCWIYK  252 (285)
T ss_dssp             CHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC------CTHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             ChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCC------CHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCC
Confidence                 12224678999999999999998 78666544      445566665543 346678899999999999999999


Q ss_pred             cCCCcCHHHH---hcCCCC
Q 039869          133 HQLRWTAKHV---LAHPFP  148 (152)
Q Consensus       133 p~~R~~~~~~---l~h~~~  148 (152)
                      |++||++.++   |+|+|+
T Consensus       253 p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         253 WEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHHH
Confidence            9999999887   456654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.8e-34  Score=198.65  Aligned_cols=133  Identities=15%  Similarity=0.214  Sum_probs=111.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.++..++.|++.||+|||+++++||||||+||+++.+   ..++++|||.                         
T Consensus       135 ~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~---~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aP  211 (301)
T d1lufa_         135 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP  211 (301)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCC---CcEEEccchhheeccCCccccccCCCCcCcCcCCH
Confidence            458999999999999999999999999999999999999877   6678888872                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        ..+..++.++|||||||++||++++..||+...     +..++...+..+. .++.|..+++++.+++..||..+|++
T Consensus       212 E~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~-----~~~e~~~~v~~~~-~~~~p~~~~~~~~~li~~cl~~~P~~  285 (301)
T d1lufa_         212 ESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-----AHEEVIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPAD  285 (301)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHHccCCCChhhhhccchhhHHHHHccCCCCCCCC-----CHHHHHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhH
Confidence              223335778999999999999999975555443     6666666665544 56678889999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      |||+.++++
T Consensus       286 RPt~~ev~~  294 (301)
T d1lufa_         286 RPSFCSIHR  294 (301)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-34  Score=195.29  Aligned_cols=134  Identities=15%  Similarity=0.170  Sum_probs=110.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH--------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL--------------------------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~--------------------------   56 (152)
                      ..+++..+..++.|++.||+|||+++++||||||+||+++.+   ..++++|||                          
T Consensus        96 ~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE  172 (263)
T d1sm2a_          96 GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE  172 (263)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGG---GCEEECSCC------------------CTTSCCHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCC---CCeEecccchheeccCCCceeecceecCcccCChH
Confidence            568899999999999999999999999999999999999887   566677776                          


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           57 QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        57 ~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                      ...+..++.++|||||||++||++++..|++...     +..++...+..+ ..+..|..+++++.+++.+||..||++|
T Consensus       173 ~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~-----~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~p~~R  246 (263)
T d1sm2a_         173 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----SNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWKERPEDR  246 (263)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC-----CHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHhc-CCCCCccccCHHHHHHHHHHccCCHhHC
Confidence            1223345778999999999999999655665543     556666666543 3455678899999999999999999999


Q ss_pred             cCHHHHhcC
Q 039869          137 WTAKHVLAH  145 (152)
Q Consensus       137 ~~~~~~l~h  145 (152)
                      |++.++++|
T Consensus       247 ps~~~il~~  255 (263)
T d1sm2a_         247 PAFSRLLRQ  255 (263)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-34  Score=197.34  Aligned_cols=133  Identities=20%  Similarity=0.268  Sum_probs=112.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      +++++..++.++.|++.||.|||++||+||||||+||+++.+   ..++++|||..                        
T Consensus       106 ~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~---~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~a  182 (273)
T d1u46a_         106 GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA  182 (273)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECCC-CCEEEC-----CCGGGCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc---cceeeccchhhhhcccCCCcceecCccccCcccCC
Confidence            468999999999999999999999999999999999999887   56788888721                        


Q ss_pred             ----hcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 ----HGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 ----~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          .+..++.++||||||+++|||++ |..||.+.      +..+....+......++.+..++.++.+++.+||..||
T Consensus       183 PE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp  256 (273)
T d1u46a_         183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL------NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP  256 (273)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC------CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCc------CHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCCh
Confidence                12223567999999999999998 77666554      66777777766666777888999999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++|||+.++++
T Consensus       257 ~~RPt~~ei~~  267 (273)
T d1u46a_         257 EDRPTFVALRD  267 (273)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999863

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-34  Score=199.97  Aligned_cols=135  Identities=16%  Similarity=0.266  Sum_probs=109.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +.++++..++.++.||+.||+|||+++|+||||||+||+++.+   +.++++|||.                        
T Consensus       105 ~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A  181 (317)
T d1xkka_         105 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA  181 (317)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET---TEEEECCCSHHHHTTTTCC--------CCTTTSC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCC---CCeEeeccccceecccccccccccccccCccccC
Confidence            4578999999999999999999999999999999999999987   5667777762                        


Q ss_pred             ---hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           58 ---RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        58 ---~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                         ..+..++.++|||||||++||++++..+|+...     ...++...+..+ ..++.|..+++++.+++.+||..||+
T Consensus       182 PE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~-----~~~~~~~~i~~~-~~~~~p~~~~~~~~~li~~cl~~dP~  255 (317)
T d1xkka_         182 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-----PASEISSILEKG-ERLPQPPICTIDVYMIMVKCWMIDAD  255 (317)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS-----CGGGHHHHHHHT-CCCCCCTTBCHHHHHHHHHHTCSSGG
T ss_pred             hHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHcC-CCCCCCcccCHHHHHHHHHhCCCChh
Confidence               122334788999999999999999433554432     445555555443 34567788999999999999999999


Q ss_pred             CCcCHHHHhcC
Q 039869          135 LRWTAKHVLAH  145 (152)
Q Consensus       135 ~R~~~~~~l~h  145 (152)
                      +|||+.++++|
T Consensus       256 ~RPs~~eil~~  266 (317)
T d1xkka_         256 SRPKFRELIIE  266 (317)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-33  Score=194.44  Aligned_cols=134  Identities=16%  Similarity=0.204  Sum_probs=110.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      .+++++.++..++.|++.||+|||+++|+||||||+|||++.+   +.++++|||.                        
T Consensus       104 ~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~  180 (283)
T d1mqba_         104 DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT  180 (283)
T ss_dssp             TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECCCCC-----------------CCCGGGS
T ss_pred             cccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCC---CeEEEcccchhhcccCCCccceEeccCCCCcccc
Confidence            3578999999999999999999999999999999999999887   5667777661                        


Q ss_pred             ----hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           58 ----RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        58 ----~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                          ..+..++.++|||||||++||++++..|++...     ...++...+..+ ..++.+..++.++.+++.+||..+|
T Consensus       181 APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~-----~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~~p  254 (283)
T d1mqba_         181 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-----SNHEVMKAINDG-FRLPTPMDCPSAIYQLMMQCWQQER  254 (283)
T ss_dssp             CHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTT-CCCCCCTTCBHHHHHHHHHHTCSST
T ss_pred             CHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC-----CHHHHHHHHhcc-CCCCCchhhHHHHHHHHHHHCcCCH
Confidence                223334678999999999999999776766553     556666666543 4456778899999999999999999


Q ss_pred             CCCcCHHHHhc
Q 039869          134 QLRWTAKHVLA  144 (152)
Q Consensus       134 ~~R~~~~~~l~  144 (152)
                      ++||++.++++
T Consensus       255 ~~RPt~~eil~  265 (283)
T d1mqba_         255 ARRPKFADIVS  265 (283)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-33  Score=195.14  Aligned_cols=132  Identities=20%  Similarity=0.330  Sum_probs=109.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH--------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL--------------------------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~--------------------------   56 (152)
                      +.+++.+++.++.||+.||+|||+++++||||||+|||++.+   +.++++||+                          
T Consensus       130 ~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  206 (299)
T d1fgka_         130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  206 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC---CCeEeccchhhccccccccccccccCCCChhhhhh
Confidence            568999999999999999999999999999999999999877   455666665                          


Q ss_pred             -HhhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccC
Q 039869           57 -QRHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        57 -~~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                       ...+..++.++||||||+++|||++ |..|+.+.      ....+...+.. ...++.|..+++++.+++.+||..||+
T Consensus       207 E~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~------~~~~~~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~dP~  279 (299)
T d1fgka_         207 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV------PVEELFKLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPS  279 (299)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHT-TCCCCCCSSCCHHHHHHHHHHTCSSGG
T ss_pred             hHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCC------CHHHHHHHHHc-CCCCCCCccchHHHHHHHHHHccCCHh
Confidence             2344556889999999999999998 46444333      55666666554 456677889999999999999999999


Q ss_pred             CCcCHHHHhc
Q 039869          135 LRWTAKHVLA  144 (152)
Q Consensus       135 ~R~~~~~~l~  144 (152)
                      +|||+.++++
T Consensus       280 ~Rps~~eil~  289 (299)
T d1fgka_         280 QRPTFKQLVE  289 (299)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-33  Score=192.12  Aligned_cols=133  Identities=19%  Similarity=0.207  Sum_probs=110.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++..+..++.|++.||+|||++||+||||||+||+++.+   ..++++|||.                         
T Consensus        95 ~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE  171 (258)
T d1k2pa_          95 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE  171 (258)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTT---CCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHH
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCC---CcEEECcchhheeccCCCceeecccCCCCCcCCcH
Confidence            468899999999999999999999999999999999999877   5667777762                         


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHh-cCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMT-AEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                       ..+..++.++||||||+++||+++ |+.||.+.      ...++...+..+ ..+..|..+++++.+++.+||+.||++
T Consensus       172 ~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~------~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dP~~  244 (258)
T d1k2pa_         172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------TNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADE  244 (258)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS------CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             HhcCCCCCcceeecccchhhHhHHhcCCCCCCCC------CHHHHHHHHHhC-CCCCCcccccHHHHHHHHHHccCCHhH
Confidence             233345778999999999999998 67555443      566666666543 355678889999999999999999999


Q ss_pred             CcCHHHHhcC
Q 039869          136 RWTAKHVLAH  145 (152)
Q Consensus       136 R~~~~~~l~h  145 (152)
                      |||++++++|
T Consensus       245 RPt~~eil~~  254 (258)
T d1k2pa_         245 RPTFKILLSN  254 (258)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999876

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-34  Score=202.09  Aligned_cols=139  Identities=24%  Similarity=0.344  Sum_probs=104.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH------------------------Hh
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL------------------------QR   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~------------------------~~   58 (152)
                      +.+++..++.+++||+.||.|||++||+||||||+||+++.++   .+++++|+                        ..
T Consensus       114 ~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~---~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l  190 (355)
T d2b1pa1         114 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI  190 (355)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC---CEEECCCCC---------------CCTTCCHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccc---ceeeechhhhhccccccccccccccccccChhhh
Confidence            5689999999999999999999999999999999999998763   33343332                        34


Q ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHH----------------------hcCC-CCC---
Q 039869           59 HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIA----------------------FSSE-VPE---  112 (152)
Q Consensus        59 ~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~---  112 (152)
                      .+..++.++||||+||++|++++|+.||.+.      +.......+.                      .... ...   
T Consensus       191 ~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (355)
T d2b1pa1         191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGR------DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  264 (355)
T ss_dssp             TTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCH
T ss_pred             cCCCCCCCcccccccchHHHHhhCCCCCCCC------CHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccc
Confidence            4566788999999999999999999777654      2222111110                      0000 000   


Q ss_pred             --------C------CCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCC
Q 039869          113 --------F------PSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSV  150 (152)
Q Consensus       113 --------~------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~  150 (152)
                              .      +...++++.+||.+||..||++|||++|+|+||||++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         265 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                    0      0113567899999999999999999999999999975

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=1.8e-33  Score=194.38  Aligned_cols=141  Identities=17%  Similarity=0.200  Sum_probs=104.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHH-------------------------HHHH
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEI-------------------------SAFL   56 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l-------------------------~~~~   56 (152)
                      ++++++.+++.++.||+.||+|||++|++||||||+||+++.++..+...+                         ..++
T Consensus       105 ~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE  184 (277)
T d1o6ya_         105 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE  184 (277)
T ss_dssp             HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHH
Confidence            357999999999999999999999999999999999999976643222111                         1112


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCC--CCCCCCChhHHHHHHHhhccccC
Q 039869           57 QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVP--EFPSNISEDGRDFLSKCFIRVHQ  134 (152)
Q Consensus        57 ~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~l~~~p~  134 (152)
                      ...+..++.++||||+||++|+|++|+.||.+.      +..+...........+  .....+++++.++|.+||..||+
T Consensus       185 ~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~  258 (277)
T d1o6ya_         185 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD------SPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPE  258 (277)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGG
T ss_pred             HHcCCCCCcceecccchHHHHHHHhCCCCCCCc------CHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHh
Confidence            344556788999999999999999999777654      4444444433333222  34567899999999999999999


Q ss_pred             CCcCHHHHhcCCCC
Q 039869          135 LRWTAKHVLAHPFP  148 (152)
Q Consensus       135 ~R~~~~~~l~h~~~  148 (152)
                      +||+..+.+.|+|.
T Consensus       259 ~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         259 NRYQTAAEMRADLV  272 (277)
T ss_dssp             GSCSSHHHHHHHHH
T ss_pred             HCHhHHHHHHHHHH
Confidence            99944444445443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=5e-33  Score=194.88  Aligned_cols=135  Identities=19%  Similarity=0.315  Sum_probs=112.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      +..+++.++..++.||+.||.|||+++++||||||+|||++.+   ..++++|||.                        
T Consensus       121 ~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~---~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~  197 (309)
T d1fvra_         121 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES  197 (309)
T ss_dssp             SCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEESSCEECCC----CCTTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC---CceEEccccccccccccccccceecCCcccchHH
Confidence            3578999999999999999999999999999999999999877   6677888872                        


Q ss_pred             hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCc
Q 039869           58 RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRW  137 (152)
Q Consensus        58 ~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~  137 (152)
                      ..+..++.++|||||||++|||++|..||+...     +..++...+..+ ..++.+..+++++.++|.+||..||++||
T Consensus       198 l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-----~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~RP  271 (309)
T d1fvra_         198 LNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERP  271 (309)
T ss_dssp             HHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             hccCCCCccceeehhHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHhc-CCCCCCccCCHHHHHHHHHHcCCChhHCc
Confidence            223334778999999999999999875555443     666777666543 45667888999999999999999999999


Q ss_pred             CHHHHhcC
Q 039869          138 TAKHVLAH  145 (152)
Q Consensus       138 ~~~~~l~h  145 (152)
                      ++.+++++
T Consensus       272 s~~eil~~  279 (309)
T d1fvra_         272 SFAQILVS  279 (309)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.5e-32  Score=191.43  Aligned_cols=134  Identities=17%  Similarity=0.270  Sum_probs=107.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH-------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ-------------------------   57 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~-------------------------   57 (152)
                      .++++.++..++.||+.||+|||+++++||||||+||+++.+   +.++++|||.                         
T Consensus       140 ~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~---~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aP  216 (311)
T d1t46a_         140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP  216 (311)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT---TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccccc---CcccccccchheeccCCCcceEeeecccChHHcCH
Confidence            368999999999999999999999999999999999999877   5666666662                         


Q ss_pred             --hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCC
Q 039869           58 --RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQL  135 (152)
Q Consensus        58 --~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~  135 (152)
                        ..+..++.++|||||||++|||++++.|++...     +.......+......+..+..+++++.+||.+||..||++
T Consensus       217 E~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~  291 (311)
T d1t46a_         217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-----PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK  291 (311)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-----CSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhH
Confidence              223335788999999999999999655665443     3333333333345566677889999999999999999999


Q ss_pred             CcCHHHHhc
Q 039869          136 RWTAKHVLA  144 (152)
Q Consensus       136 R~~~~~~l~  144 (152)
                      ||++.++++
T Consensus       292 RPs~~~il~  300 (311)
T d1t46a_         292 RPTFKQIVQ  300 (311)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.1e-32  Score=192.17  Aligned_cols=146  Identities=15%  Similarity=0.160  Sum_probs=106.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH------------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ------------------------   57 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~------------------------   57 (152)
                      ++++++..+..++.|++.||+|||++||+||||||+||+++.......++++|||.                        
T Consensus        97 ~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt  176 (299)
T d1ckia_          97 SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT  176 (299)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCC
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCC
Confidence            46799999999999999999999999999999999999986554445677777772                        


Q ss_pred             --------hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhh
Q 039869           58 --------RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCF  129 (152)
Q Consensus        58 --------~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l  129 (152)
                              ..+..++.++|||||||++||+++|+.||........................+..+..+++++.+++..||
T Consensus       177 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl  256 (299)
T d1ckia_         177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  256 (299)
T ss_dssp             SSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             ccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHc
Confidence                    223335788999999999999999997776543222111111111111122223345678999999999999


Q ss_pred             ccccCCCcCHHH---HhcCCC
Q 039869          130 IRVHQLRWTAKH---VLAHPF  147 (152)
Q Consensus       130 ~~~p~~R~~~~~---~l~h~~  147 (152)
                      ..+|++||++.+   +|+++|
T Consensus       257 ~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         257 SLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             HSCTTCCCCHHHHHHHHHHHH
T ss_pred             cCChhHCcCHHHHHHHHHHHH
Confidence            999999999874   456554

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.2e-32  Score=190.08  Aligned_cols=137  Identities=15%  Similarity=0.269  Sum_probs=112.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH--------------------------
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ--------------------------   57 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~--------------------------   57 (152)
                      .+++..+..++.|++.||.|||+++|+||||||+|||++.+   ..++++|||.                          
T Consensus       129 ~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe  205 (308)
T d1p4oa_         129 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE  205 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT---CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCC---ceEEEeecccceeccCCcceeeccceecccccCCHH
Confidence            46888999999999999999999999999999999999987   6778888872                          


Q ss_pred             -hhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCC
Q 039869           58 -RHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLR  136 (152)
Q Consensus        58 -~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  136 (152)
                       ..+..++.++||||||+++|||+++..+|+...     +..+....+..+ ..++.|..+++.+.+++.+||+.+|++|
T Consensus       206 ~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-----~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~~P~~R  279 (308)
T d1p4oa_         206 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNPKMR  279 (308)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhC-CCCCCcccchHHHHHHHHHHcCCChhHC
Confidence             123334678999999999999999975665543     566666665543 3566778899999999999999999999


Q ss_pred             cCHHHHhc------CCCCC
Q 039869          137 WTAKHVLA------HPFPS  149 (152)
Q Consensus       137 ~~~~~~l~------h~~~~  149 (152)
                      |++.++++      +|+|+
T Consensus       280 Ps~~~il~~L~~~~~~~~~  298 (308)
T d1p4oa_         280 PSFLEIISSIKEEMEPGFR  298 (308)
T ss_dssp             CCHHHHHHHHGGGSCTTHH
T ss_pred             cCHHHHHHHHHHhcCCCCc
Confidence            99999986      66654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-32  Score=189.89  Aligned_cols=134  Identities=14%  Similarity=0.256  Sum_probs=106.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHHh------------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQR------------------------   58 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~------------------------   58 (152)
                      ..+++..+..++.|++.||.|||+.+|+||||||+|||++.+   ..++++|||..                        
T Consensus       125 ~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~---~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~  201 (311)
T d1r0pa_         125 HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM  201 (311)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGS
T ss_pred             ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCC---CCEEEecccchhhccccccccceeccccccccccc
Confidence            346788899999999999999999999999999999999887   66778888732                        


Q ss_pred             -----hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhcccc
Q 039869           59 -----HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVH  133 (152)
Q Consensus        59 -----~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p  133 (152)
                           .+..++.++||||||+++||++++..||....     +..++...+..+ ..+..|..+++++.+++.+||..||
T Consensus       202 aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~-----~~~~~~~~i~~g-~~~~~p~~~~~~l~~li~~cl~~dP  275 (311)
T d1r0pa_         202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQG-RRLLQPEYCPDPLYEVMLKCWHPKA  275 (311)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-----------CHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             ChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHcC-CCCCCcccCcHHHHHHHHHHcCCCH
Confidence                 12224678999999999999999887776653     333444444433 3456778899999999999999999


Q ss_pred             CCCcCHHHHhcC
Q 039869          134 QLRWTAKHVLAH  145 (152)
Q Consensus       134 ~~R~~~~~~l~h  145 (152)
                      ++||++.++++|
T Consensus       276 ~~RPs~~ei~~~  287 (311)
T d1r0pa_         276 EMRPSFSELVSR  287 (311)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999876

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7e-32  Score=185.03  Aligned_cols=132  Identities=14%  Similarity=0.228  Sum_probs=106.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHH----------------------HhhcC
Q 039869            4 GLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFL----------------------QRHGL   61 (152)
Q Consensus         4 ~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~----------------------~~~~~   61 (152)
                      ++++..++.++.||+.||+|||+++++||||||+||+++.+   +.+++++|+                      ...+.
T Consensus        99 ~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~---~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~  175 (262)
T d1byga_          99 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK  175 (262)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC------------CCTTTSCHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCC---CCEeecccccceecCCCCccccccccCCChHHHhCC
Confidence            47899999999999999999999999999999999999877   444555544                      23344


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHHHhcCCCCCCCCCCChhHHHHHHHhhccccCCCcCHHH
Q 039869           62 LLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELIAFSSEVPEFPSNISEDGRDFLSKCFIRVHQLRWTAKH  141 (152)
Q Consensus        62 ~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~  141 (152)
                      .++.++||||||+++||++++..+|+...     ....+...+.. ...++.+..+++++.+++.+||..||++|||+.+
T Consensus       176 ~~t~~sDIwSfG~il~el~t~~~~p~~~~-----~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~  249 (262)
T d1byga_         176 KFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ  249 (262)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CGGGHHHHHTT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCChHHHHHhHHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHc-CCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHH
Confidence            56889999999999999998433444432     55555555543 3456678889999999999999999999999999


Q ss_pred             Hhc
Q 039869          142 VLA  144 (152)
Q Consensus       142 ~l~  144 (152)
                      +++
T Consensus       250 l~~  252 (262)
T d1byga_         250 LRE  252 (262)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=3.4e-32  Score=193.97  Aligned_cols=149  Identities=21%  Similarity=0.335  Sum_probs=103.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCCccCCCCCCCeeeecCCC---chhHHHHHHH----------------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS-HGLVHCDIQGDNTLLVAGKD---AHEAEISAFL----------------------   56 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~-~~i~h~dlk~~Nil~~~~~~---~~~~~l~~~~----------------------   56 (152)
                      ..+++..++.++.||+.||+|||+ .||+||||||+|||++..+.   ...+++.|||                      
T Consensus       120 ~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE  199 (362)
T d1q8ya_         120 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPE  199 (362)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHH
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccccChh
Confidence            467899999999999999999997 89999999999999975422   1124566665                      


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChH-HHHHHHHh-cC-----------------------C--
Q 039869           57 QRHGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRD-DLLELIAF-SS-----------------------E--  109 (152)
Q Consensus        57 ~~~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~-----------------------~--  109 (152)
                      ...+..++.++|+||+||+++++++|+.||............ .+...... +.                       .  
T Consensus       200 ~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (362)
T d1q8ya_         200 VLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNIS  279 (362)
T ss_dssp             HHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCC
T ss_pred             hccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccc
Confidence            233444578899999999999999999777544221111111 11111100 00                       0  


Q ss_pred             -------------CCCCCCCCChhHHHHHHHhhccccCCCcCHHHHhcCCCCCCC
Q 039869          110 -------------VPEFPSNISEDGRDFLSKCFIRVHQLRWTAKHVLAHPFPSVD  151 (152)
Q Consensus       110 -------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~l~h~~~~~~  151 (152)
                                   ....+...++++.+||.+||.+||++|||+.|+|+||||++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         280 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             CCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence                         001122346778999999999999999999999999999853

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=7.9e-30  Score=177.33  Aligned_cols=138  Identities=19%  Similarity=0.166  Sum_probs=103.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCC--CchhHHHHHHHHh---------------------
Q 039869            2 AKGLPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGK--DAHEAEISAFLQR---------------------   58 (152)
Q Consensus         2 ~~~l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~--~~~~~~l~~~~~~---------------------   58 (152)
                      ++.+++.++..++.|++.||+|||++||+||||||+||+++...  ....++++|||..                     
T Consensus        95 ~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~  174 (293)
T d1csna_          95 GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS  174 (293)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCC
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceE
Confidence            45789999999999999999999999999999999999997532  2345677787722                     


Q ss_pred             -----------hcCCCCcchhHHHHHHHHHHHHhcCcccCCccCCCCCChHHHHHHH---HhcCCCCCCCCCCChhHHHH
Q 039869           59 -----------HGLLLIYHVDTWALGRVFVEMMTAEISAWGSFGRGLASRDDLLELI---AFSSEVPEFPSNISEDGRDF  124 (152)
Q Consensus        59 -----------~~~~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l  124 (152)
                                 .+..++.++|+|||||++|++++|..||.+....   ........+   ........++..+++++.++
T Consensus       175 GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~i  251 (293)
T d1csna_         175 GTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA---TNKQKYERIGEKKQSTPLRELCAGFPEEFYKY  251 (293)
T ss_dssp             SCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC---CHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHH
T ss_pred             EchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccch---hHHHHHHHHHhccCCCChHHhcCCCCHHHHHH
Confidence                       2333577899999999999999999777654321   222222221   11222233456789999999


Q ss_pred             HHHhhccccCCCcCHHHH
Q 039869          125 LSKCFIRVHQLRWTAKHV  142 (152)
Q Consensus       125 l~~~l~~~p~~R~~~~~~  142 (152)
                      +..|+..+|++||+++.+
T Consensus       252 i~~~~~~~~~~rP~y~~l  269 (293)
T d1csna_         252 MHYARNLAFDATPDYDYL  269 (293)
T ss_dssp             HHHHHHCCTTCCCCHHHH
T ss_pred             HHHHhcCCcccCcCHHHH
Confidence            999999999999987765

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-29  Score=175.35  Aligned_cols=139  Identities=17%  Similarity=0.184  Sum_probs=101.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh--------CCCccCCCCCCCeeeecCCCchhHHHHHHHHhh---------------
Q 039869            3 KGLPEHEIGRYTKDILRGLDHIHS--------HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRH---------------   59 (152)
Q Consensus         3 ~~l~~~~~~~i~~qi~~~l~~lh~--------~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~---------------   59 (152)
                      .++++.++..++.|++.||+|||.        +||+||||||+|||++.+   +.++++|||...               
T Consensus        95 ~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~---~~~Kl~DFGl~~~~~~~~~~~~~~~~~  171 (303)
T d1vjya_          95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNH  171 (303)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEECC----
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC---CCeEEEecCccccccCCCcceeccccc
Confidence            468899999999999999999996        599999999999999887   677788887110               


Q ss_pred             --cC------------------CCCcchhHHHHHHHHHHHHhcCcccCCccCC---------CCCChHHHHHHHHhcCCC
Q 039869           60 --GL------------------LLIYHVDTWALGRVFVEMMTAEISAWGSFGR---------GLASRDDLLELIAFSSEV  110 (152)
Q Consensus        60 --~~------------------~~~~~~DvwslG~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~  110 (152)
                        |+                  .++.++|||||||++||+++|..|+......         ..................
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (303)
T d1vjya_         172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR  251 (303)
T ss_dssp             CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             eecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccC
Confidence              11                  1244689999999999999998554322111         112234444444444444


Q ss_pred             CCCCCCC-----ChhHHHHHHHhhccccCCCcCHHHHhc
Q 039869          111 PEFPSNI-----SEDGRDFLSKCFIRVHQLRWTAKHVLA  144 (152)
Q Consensus       111 ~~~~~~~-----~~~~~~ll~~~l~~~p~~R~~~~~~l~  144 (152)
                      ++++...     ...+.+++.+||+.||++|||+.++++
T Consensus       252 p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         252 PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            5444332     235889999999999999999999875

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.43  E-value=5.6e-15  Score=95.82  Aligned_cols=49  Identities=22%  Similarity=0.230  Sum_probs=41.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCCeeeecCCCchhHHHHHHHH
Q 039869            5 LPEHEIGRYTKDILRGLDHIHSHGLVHCDIQGDNTLLVAGKDAHEAEISAFLQ   57 (152)
Q Consensus         5 l~~~~~~~i~~qi~~~l~~lh~~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~   57 (152)
                      ++...+..++.|++.+|++||++|++||||||+|||++.+   + +++.|||.
T Consensus       100 l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~---~-~~liDFG~  148 (191)
T d1zara2         100 VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE---G-IWIIDFPQ  148 (191)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT---E-EEECCCTT
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC---C-EEEEECCC
Confidence            5566788999999999999999999999999999999855   2 45667773

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.64  E-value=0.0067  Score=40.62  Aligned_cols=46  Identities=13%  Similarity=0.244  Sum_probs=29.0

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFLQRHGLLLIYHVDTWALGRVFVEMM   80 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~~~~~~~~~~DvwslG~~l~~~~   80 (152)
                      .|+||+|+.++|++++.+   +...+.||+.....     .=++-+++++..++
T Consensus       183 ~giIHgDl~~dNvl~~~~---~v~gvIDF~~~~~~-----~~~~DLAi~~~~~~  228 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGD---ELSGLIDFYFACND-----LLAYDVSICLNAWC  228 (316)
T ss_dssp             EEEECSCCCGGGEEEETT---EEEEECCCTTCEEE-----EHHHHHHHHHHHHS
T ss_pred             cccccCCcchhhhhcccc---cceeEecccccccc-----hhhhhHHHHHHHHh
Confidence            378999999999999876   44456666533211     12344565555544

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.26  E-value=0.037  Score=35.64  Aligned_cols=26  Identities=15%  Similarity=0.206  Sum_probs=19.7

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      .++|+|+.|.|++++.+   +.+.+.|++
T Consensus       184 ~l~HgD~~~~Nil~~~~---~~~~lIDwe  209 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDG---KVSGFIDLG  209 (263)
T ss_dssp             EEECSCCCTTSEEEETT---EEEEECCCT
T ss_pred             EEEEeeccCcceeecCC---ceEEEeech
Confidence            47999999999999866   343455654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=84.83  E-value=0.03  Score=35.92  Aligned_cols=28  Identities=14%  Similarity=0.016  Sum_probs=20.8

Q ss_pred             CCccCCCCCCCeeeecCCCchhHHHHHHHHh
Q 039869           28 GLVHCDIQGDNTLLVAGKDAHEAEISAFLQR   58 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~~~~~~~~l~~~~~~   58 (152)
                      .++|+|+.|.|++++.+   +.+.+.|++..
T Consensus       176 ~liHgD~~~~Nvl~~~~---~~~~iID~~~~  203 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENG---RFSGFIDCGRL  203 (255)
T ss_dssp             EEECSSCCGGGEEEETT---EEEEECCCTTC
T ss_pred             eEEeCCCCCcceEEeCC---ceEEEEEchhc
Confidence            47999999999999866   44445665543

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=84.66  E-value=0.053  Score=37.47  Aligned_cols=26  Identities=12%  Similarity=0.184  Sum_probs=19.8

Q ss_pred             CCCccCCCCCCCeeeecCCCchhHHHHHHH
Q 039869           27 HGLVHCDIQGDNTLLVAGKDAHEAEISAFL   56 (152)
Q Consensus        27 ~~i~h~dlk~~Nil~~~~~~~~~~~l~~~~   56 (152)
                      ..++|||+.+.||+++.++    +.+.|+.
T Consensus       223 ~~LiHGDl~~gNIlv~~~~----~~vID~E  248 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE----TKVIDPE  248 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC----EEECCCT
T ss_pred             cceeccCCcCCceeEcCCc----eEEechh
Confidence            3689999999999998652    3555654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=83.24  E-value=0.34  Score=32.27  Aligned_cols=17  Identities=29%  Similarity=0.304  Sum_probs=15.0

Q ss_pred             CCccCCCCCCCeeeecC
Q 039869           28 GLVHCDIQGDNTLLVAG   44 (152)
Q Consensus        28 ~i~h~dlk~~Nil~~~~   44 (152)
                      +++|+|+.+.||+++.+
T Consensus       193 ~liHgDlh~~NvL~~~~  209 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG  209 (325)
T ss_dssp             EECCSSCSGGGEEESSS
T ss_pred             eeecCCCCcccEEEeCC
Confidence            68999999999999743