Citrus Sinensis ID: 039882

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140--
RKHKPKNSISNISKQSIKSSLSLALSLLRQSAPFLHRNALRFSALNHSFSQFHDMATESGKSFARRDRLLEIESKVHTWWEESNVFNAEPGERPPNPESGEKFFGNFPFPYMNGYLHLGHAFSFSKLEFAAAYHRLKGANVLLPFGFHCTGMPIKASADKLAREIKQFGNPPVFLKEAEKEESPQPEEAEDPNGGAPLDKFKSKKSKAAAKSGVQMYQWEIMRSFGLSDSEISEFQEPEKWLNFFPPLAKEDLKAFGLGCDWRRSFVTTEINPFFDSFVQWQMRKLKSMGKIIKDVRYTIYSPLDDQPCADHDRASGEGVQPQDYTLIKMEVLQPFPAKFGPLEGKKVYLAAATLRPETMYGQTNAWVLPDGKYGAFEISETDVLIVTERAALNLAYQNFSRIPKKPTCLVELTGYDLIGLPLKSPLSFNEVIYALPMLTILTDKGTGIVTSVPSDAPDDYMALHDLKAKPAFRAKFGVKDEWVLPFEVIPIINIPEFGDKSAERVCTDLKIKSQNEKDKLAEAKRLTYLRGFTEGTMLVGDFAGKKVQDAKPLIRSKLIETGEAIMYSEPEKRVMSRSGDECVVALTDQWYITYGEEEWKRLATECLNSMNLYHDENRHGFEHTLGWLNQWACSRSFGLGTRIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTGSIEPGQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEYRLSCGAGGLNRDLVWRFMDVQTRLITPICPHYAEYVWRVILKKDGFAVKAGWPTYGTPDLILKSANKYLQDSIVLMRKLLQKQILGSKKANKKGAPVATLTEDKLKGLVYVNEQFDGWKAECLRILQSKFDSKSRTFAPDGEILEALQNSSVGQASNFKQTQKLCMPFLRFKKDEAKAIGPQALDLKLPFGEIEVLQENLDLIKRQLGLEEVEILSATDPDALSKAGSLSSLLKQNPPSPGNPTAIFLTR
ccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccEEEccccccccHHHHHHcccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHcccHHHHHHHccHHHHHHHHHccccccccccEEEcccccccHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccEEEEEEEEECccccccccccccccEEEEEEcccccccccccCEEEcccccEEEEEEccccEEEEcHHHHHHccccccccccccccEEEEEccccccccccccccccccEEEEcccccccccccccEEEEccccccHHHHHHHHHHccHHHHHHccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccccccEEEEEEccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccHHcccccccccccccccccccccccEEEEEHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHccccccccEEEEccEEccccccccccccccccHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccEEECcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHcccccccHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccEEEEEEc
************SKQSIKSSLSLALSLLRQSAPFLHRNALRFSALNHSFSQFH************RDRLLEIESKVHTWWEESNVFNAEPG******ESGEKFFGNFPFPYMNGYLHLGHAFSFSKLEFAAAYHRLKGANVLLPFGFHCTGMPIKASADKLAREIKQFGNPPVFLKEAEK*************GGAPLD************SGVQMYQWEIMRSFGLSDSEISEFQEPEKWLNFFPPLAKEDLKAFGLGCDWRRSFVTTEINPFFDSFVQWQMRKLKSMGKIIKDVRYTIYSPLDDQPCADHDRASGEGVQPQDYTLIKMEVLQPFPAKFGPLEGKKVYLAAATLRPETMYGQTNAWVLPDGKYGAFEISETDVLIVTERAALNLAYQNFSRIPKKPTCLVELTGYDLIGLPLKSPLSFNEVIYALPMLTILTDKGTGIVTSVPSDAPDDYMALHDLKAKPAFRAKFGVKDEWVLPFEVIPIINIPEFGDKSAERVCTDLKIKSQNEKDKLAEAKRLTYLRGFTEGTMLVGDFAGKKVQDAKPLIRSKLIETGEAIMYSEPEKRVMSRSGDECVVALTDQWYITYGEEEWKRLATECLNSMNLYHDENRHGFEHTLGWLNQWACSRSFGLGTRIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTGSIEPGQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEYRLSCGAGGLNRDLVWRFMDVQTRLITPICPHYAEYVWRVILKKDGFAVKAGWPTYGTPDLILKSANKYLQDSIVLMRKLLQKQILGS*********VATLTEDKLKGLVYVNEQFDGWKAECLRILQSKFDSKSRTFAPDGEILEALQ***********QTQKLCMPFLRFKKDEAKAIGPQALDLKLPFGEIEVLQENLDLIKRQLGLEEVEILSATDP****************PPSPGNPTAIFLTR
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
RKHKPKNSISNISKQSIKSSLSLALSLLRQSAPFLHRNALRFSALNHSFSQFHDMATESGKSFARRDRLLEIESKVHTWWEESNVFNAEPGERPPNPESGEKFFGNFPFPYMNGYLHLGHAFSFSKLEFAAAYHRLKGANVLLPFGFHCTGMPIKASADKLAREIKQFGNPPVFLKEAEKEESPQPEEAEDPNGGAPLDKFKSKKSKAAAKSGVQMYQWEIMRSFGLSDSEISEFQEPEKWLNFFPPLAKEDLKAFGLGCDWRRSFVTTEINPFFDSFVQWQMRKLKSMGKIIKDVRYTIYSPLDDQPCADHDRASGEGVQPQDYTLIKMEVLQPFPAKFGPLEGKKVYLAAATLRPETMYGQTNAWVLPDGKYGAFEISETDVLIVTERAALNLAYQNFSRIPKKPTCLVELTGYDLIGLPLKSPLSFNEVIYALPMLTILTDKGTGIVTSVPSDAPDDYMALHDLKAKPAFRAKFGVKDEWVLPFEVIPIINIPEFGDKSAERVxxxxxxxxxxxxxxxxxxxxxTYLRGFTEGTMLVGDFAGKKVQDAKPLIRSKLIETGEAIMYSEPEKRVMSRSGDECVVALTDQWYITYGEEEWKRLATECLNSMNLYHDENRHGFEHTLGWLNQWACSRSFGLGTRIPWDPQFLVESLSDSTIYMAYYTVAHMLHKGDMYGSTTGSIEPGQMTDEVWEFIFCGGPYPESSNIPSSILNRMKQEFEYWYPFDLRVSGKDLIQNHLTFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEYRLSCGAGGLNRDLVWRFMDVQTRLITPICPHYAEYVWRVILKKDGFAVKAGWPTYGTPDLILKSANKYLQDSIVLMRKLLQKQILGSKKANKKGAPVATLTEDKLKGLVYVNEQFDGWKAECLRILQSKFDSKSRTFAPDGEILEALQNSSVGQASNFKQTQKLCMPFLRFKKDEAKAIGPQALDLKLPFGExxxxxxxxxxxxxxxxxxxxxILSATDPDALSKAGSLSSLLKQNPPSPGNPTAIFLTR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Putative leucine--tRNA ligase, cytoplasmic probableQ10490
Leucine--tRNA ligase probableQ8NKR7
Leucine--tRNA ligase, cytoplasmic probableQ8BMJ2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.1.-.-1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.probable
6.1.1.-Ligases forming aminoacyl-tRNA and related compounds.probable
6.1.1.4Leucine--tRNA ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2V0C, chain A
Confidence level:very confident
Coverage over the Query: 65-171,238-464,475-502,516-585,628-949
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View the model in PyMOL
Template: 2WFD, chain A
Confidence level:very confident
Coverage over the Query: 321-568
View the alignment between query and template
View the model in PyMOL
Template: 1WZ2, chain A
Confidence level:very confident
Coverage over the Query: 67-170,215-484,501-1140
View the alignment between query and template
View the model in PyMOL
Template: 1GAX, chain A
Confidence level:very confident
Coverage over the Query: 63-170,192-205,239-334,346-372,383,396-397,416-464,475-503,539-976
View the alignment between query and template
View the model in PyMOL
Template: 1FFY, chain A
Confidence level:confident
Coverage over the Query: 48-171,193-207,241-464,475-503,539-1005
View the alignment between query and template
View the model in PyMOL